TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 178 | 3.5e-55 | TIR domain |
| TIR_2 | PF13676 | 15 - 110 | 1e-15 | TIR domain |
| NB-ARC | PF00931 | 196 - 363 | 3.1e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 431 - 498 | 2.4e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 686 - 790 | 3.6e-13 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 786 - 833 | 6.3e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 823 - 878 | 5.8e-12 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 869 - 951 | 4.4e-15 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 1046 - 1143 | 1.7e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1428 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3669 |
| AatII | GACGTC | 2 cut(s) | 1865, 3442 |
| AccB1I | GGYRCC | 1 cut(s) | 3012 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1039 |
| AccI | GTMKAC | 1 cut(s) | 4209 |
| AccII | CGCG | 3 cut(s) | 2294, 3447, 3993 |
| AccIII | TCCGGA | 1 cut(s) | 1913 |
| AciI | CCGC | 7 cut(s) | 443, 1112, 2163, 2292, 2960, 3447, 3882 |
| AclI | AACGTT | 1 cut(s) | 1933 |
| AcoI | YGGCCR | 3 cut(s) | 555, 828, 2289 |
| AcuI | CTGAAG | 2 cut(s) | 2378, 3888 |
| AcvI | CACGTG | 1 cut(s) | 4007 |
| AcyI | GRCGYC | 2 cut(s) | 1862, 3439 |
| AdeI | CACNNNGTG | 1 cut(s) | 1288 |
| AfaI | GTAC | 5 cut(s) | 347, 541, 563, 946, 1636 |
| AfeI | AGCGCT | 3 cut(s) | 103, 174, 3049 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 243, 409, 1039, 1103, 2907, 3022, 3147 |
| AflII | CTTAAG | 2 cut(s) | 1627, 3155 |
| AflIII | ACRYGT | 4 cut(s) | 1342, 2568, 3935, 4006 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3211 |
| AjiI | CACGTC | 1 cut(s) | 2569 |
| AjnI | CCWGG | 5 cut(s) | 1504, 3121, 3676, 3733, 4050 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 233, 265 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 612, 644, 3672, 3704 |
| Alw21I | GWGCWC | 2 cut(s) | 1398, 2124 |
| Alw26I | GTCTC | 5 cut(s) | 1533, 1906, 3220, 3321, 3677 |
| Alw44I | GTGCAC | 1 cut(s) | 2120 |
| Ama87I | CYCGRG | 1 cut(s) | 272 |
| Aor13HI | TCCGGA | 1 cut(s) | 1913 |
| Aor51HI | AGCGCT | 3 cut(s) | 103, 174, 3049 |
| AoxI | GGCC | 8 cut(s) | 88, 555, 828, 1147, 1407, 1739, 2289, 3717 |
| ApaLI | GTGCAC | 1 cut(s) | 2120 |
| AseI | ATTAAT | 1 cut(s) | 3861 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 411, 1079, 1299, 3075 |
| AspA2I | CCTAGG | 1 cut(s) | 3764 |
| AspLEI | GCGC | 5 cut(s) | 104, 175, 2768, 2919, 3050 |
| AspS9I | GGNCC | 5 cut(s) | 1030, 1094, 1408, 3717, 4045 |
| AsuC2I | CCSGG | 4 cut(s) | 404, 2908, 3435, 4201 |
| AsuNHI | GCTAGC | 1 cut(s) | 4130 |
| AvaI | CYCGRG | 1 cut(s) | 272 |
| AvaII | GGWCC | 3 cut(s) | 1030, 1094, 4045 |
| AvrII | CCTAGG | 1 cut(s) | 3764 |
| AxyI | CCTNAGG | 1 cut(s) | 2761 |
| BaeGI | GKGCMC | 3 cut(s) | 2124, 2902, 3017 |
| BalI | TGGCCA | 2 cut(s) | 557, 830 |
| BamHI | GGATCC | 1 cut(s) | 3450 |
| BanI | GGYRCC | 1 cut(s) | 3012 |
| BauI | CACGAG | 2 cut(s) | 582, 4104 |
| BbrPI | CACGTG | 1 cut(s) | 4007 |
| BbsI | GAAGAC | 4 cut(s) | 3251, 3434, 3894, 4272 |
| Bbv12I | GWGCWC | 2 cut(s) | 1398, 2124 |
| BceAI | ACGGC | 2 cut(s) | 2904, 3643 |
| BciT130I | CCWGG | 5 cut(s) | 1506, 3123, 3678, 3735, 4052 |
| BciVI | GTATCC | 2 cut(s) | 61, 2904 |
| BclI | TGATCA | 8 cut(s) | 6, 139, 855, 916, 3115, 3753, 4078, 4216 |
| BcnI | CCSGG | 4 cut(s) | 404, 2908, 3435, 4201 |
| BcoDI | GTCTC | 5 cut(s) | 1533, 1906, 3220, 3321, 3677 |
| BfaI | CTAG | 9 cut(s) | 489, 681, 840, 1172, 1809, 2999, 3765, 3956, 4131 |
| BfmI | CTRYAG | 2 cut(s) | 1951, 4167 |
| BfoI | RGCGCY | 4 cut(s) | 105, 176, 2920, 3051 |
| BfrI | CTTAAG | 2 cut(s) | 1627, 3155 |
| BfuI | GTATCC | 2 cut(s) | 61, 2904 |
| BlnI | CCTAGG | 1 cut(s) | 3764 |
| Bme1390I | CCNGG | 9 cut(s) | 404, 1506, 2908, 3123, 3435, 3678, 3735, 4052, 4201 |
| Bme18I | GGWCC | 3 cut(s) | 1030, 1094, 4045 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3211 |
| BmeT110I | CYCGRG | 1 cut(s) | 272 |
| BmgBI | CACGTC | 1 cut(s) | 2569 |
| BmgT120I | GGNCC | 5 cut(s) | 1030, 1094, 1408, 3717, 4045 |
| BmiI | GGNNCC | 7 cut(s) | 1570, 3014, 3127, 3452, 3718, 4046, 4239 |
| BmrFI | CCNGG | 9 cut(s) | 404, 1506, 2908, 3123, 3435, 3678, 3735, 4052, 4201 |
| BmrI | ACTGGG | 1 cut(s) | 560 |
| BmtI | GCTAGC | 1 cut(s) | 4134 |
| BmuI | ACTGGG | 1 cut(s) | 560 |
| BpiI | GAAGAC | 4 cut(s) | 3251, 3434, 3894, 4272 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3986, 4018 |
| BpmI | CTGGAG | 1 cut(s) | 1716 |
| BpuEI | CTTGAG | 5 cut(s) | 1043, 1128, 1744, 2054, 2123 |
| BpuMI | CCSGG | 4 cut(s) | 404, 2908, 3435, 4201 |
| Bsa29I | ATCGAT | 2 cut(s) | 2258, 2465 |
| BsaAI | YACGTR | 1 cut(s) | 4007 |
| BsaBI | GATNNNNATC | 3 cut(s) | 206, 915, 4077 |
| BsaHI | GRCGYC | 2 cut(s) | 1862, 3439 |
| BsaI | GGTCTC | 1 cut(s) | 1533 |
| BsaJI | CCNNGG | 9 cut(s) | 29, 330, 1504, 2277, 2415, 2553, 3676, 3764, 4200 |
| BsaWI | WCCGGW | 1 cut(s) | 1913 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 243, 409, 1039, 1103, 2907, 3022, 3147 |
| Bse1I | ACTGG | 4 cut(s) | 308, 566, 3027, 3420 |
| Bse21I | CCTNAGG | 1 cut(s) | 2761 |
| Bse3DI | GCAATG | 5 cut(s) | 878, 1211, 3521, 4132, 4305 |
| Bse8I | GATNNNNATC | 3 cut(s) | 206, 915, 4077 |
| BseAI | TCCGGA | 1 cut(s) | 1913 |
| BseBI | CCWGG | 5 cut(s) | 1506, 3123, 3678, 3735, 4052 |
| BseCI | ATCGAT | 2 cut(s) | 2258, 2465 |
| BseDI | CCNNGG | 9 cut(s) | 29, 330, 1504, 2277, 2415, 2553, 3676, 3764, 4200 |
| BseJI | GATNNNNATC | 3 cut(s) | 206, 915, 4077 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 243, 409, 1039, 1103, 2907, 3022, 3147 |
| BseMI | GCAATG | 5 cut(s) | 878, 1211, 3521, 4132, 4305 |
| BseMII | CTCAG | 3 cut(s) | 41, 483, 4304 |
| BseNI | ACTGG | 4 cut(s) | 308, 566, 3027, 3420 |
| BseRI | GAGGAG | 1 cut(s) | 168 |
| BseSI | GKGCMC | 3 cut(s) | 2124, 2902, 3017 |
| BseYI | CCCAGC | 1 cut(s) | 3141 |
| BsgI | GTGCAG | 3 cut(s) | 118, 2162, 3087 |
| Bsh1236I | CGCG | 3 cut(s) | 2294, 3447, 3993 |
| BshFI | GGCC | 8 cut(s) | 90, 557, 830, 1149, 1409, 1741, 2291, 3719 |
| BshNI | GGYRCC | 1 cut(s) | 3012 |
| BshVI | ATCGAT | 2 cut(s) | 2258, 2465 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1398, 2124 |
| BsiHKCI | CYCGRG | 1 cut(s) | 272 |
| BsiSI | CCGG | 5 cut(s) | 404, 1914, 2907, 3434, 4200 |
| BslFI | GGGAC | 2 cut(s) | 1734, 3450 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 243, 409, 1039, 1103, 2907, 3022, 3147 |
| BsmAI | GTCTC | 5 cut(s) | 1533, 1906, 3220, 3321, 3677 |
| BsmFI | GGGAC | 2 cut(s) | 1734, 3450 |
| BsmI | GAATGC | 2 cut(s) | 389, 1081 |
| BsnI | GGCC | 8 cut(s) | 90, 557, 830, 1149, 1409, 1741, 2291, 3719 |
| Bso31I | GGTCTC | 1 cut(s) | 1533 |
| BsoBI | CYCGRG | 1 cut(s) | 272 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1398, 2124, 2902, 3017 |
| Bsp13I | TCCGGA | 1 cut(s) | 1913 |
| Bsp19I | CCATGG | 1 cut(s) | 29 |
| Bsp68I | TCGCGA | 1 cut(s) | 3993 |
| BspACI | CCGC | 7 cut(s) | 443, 1112, 2163, 2292, 2960, 3447, 3882 |
| BspANI | GGCC | 8 cut(s) | 90, 557, 830, 1149, 1409, 1741, 2291, 3719 |
| BspCNI | CTCAG | 3 cut(s) | 42, 482, 4305 |
| BspDI | ATCGAT | 2 cut(s) | 2258, 2465 |
| BspEI | TCCGGA | 1 cut(s) | 1913 |
| BspFNI | CGCG | 3 cut(s) | 2294, 3447, 3993 |
| BspHI | TCATGA | 7 cut(s) | 379, 1009, 1048, 1531, 3910, 3970, 4222 |
| BspLI | GGNNCC | 7 cut(s) | 1570, 3014, 3127, 3452, 3718, 4046, 4239 |
| BspOI | GCTAGC | 1 cut(s) | 4134 |
| BspT107I | GGYRCC | 1 cut(s) | 3012 |
| BspTI | CTTAAG | 2 cut(s) | 1627, 3155 |
| BspTNI | GGTCTC | 1 cut(s) | 1533 |
| BsrDI | GCAATG | 5 cut(s) | 878, 1211, 3521, 4132, 4305 |
| BsrI | ACTGG | 4 cut(s) | 308, 566, 3027, 3420 |
| BssECI | CCNNGG | 9 cut(s) | 29, 330, 1504, 2277, 2415, 2553, 3676, 3764, 4200 |
| BssNI | GRCGYC | 2 cut(s) | 1862, 3439 |
| BssSI | CACGAG | 2 cut(s) | 582, 4104 |
| BssT1I | CCWWGG | 5 cut(s) | 29, 2277, 2415, 2553, 3764 |
| Bst2BI | CACGAG | 2 cut(s) | 582, 4104 |
| Bst2UI | CCWGG | 5 cut(s) | 1506, 3123, 3678, 3735, 4052 |
| Bst6I | CTCTTC | 6 cut(s) | 186, 507, 616, 2416, 2583, 3081 |
| BstACI | GRCGYC | 2 cut(s) | 1862, 3439 |
| BstAFI | CTTAAG | 2 cut(s) | 1627, 3155 |
| BstBAI | YACGTR | 1 cut(s) | 4007 |
| BstC8I | GCNNGC | 4 cut(s) | 3046, 3268, 4025, 4132 |
| BstDSI | CCRYGG | 1 cut(s) | 29 |
| BstEII | GGTNACC | 1 cut(s) | 938 |
| BstFNI | CGCG | 3 cut(s) | 2294, 3447, 3993 |
| BstH2I | RGCGCY | 4 cut(s) | 105, 176, 2920, 3051 |
| BstHHI | GCGC | 5 cut(s) | 104, 175, 2768, 2919, 3050 |
| BstMAI | GTCTC | 5 cut(s) | 1533, 1906, 3220, 3321, 3677 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 96, 437, 836, 4131, 4169, 4304 |
| BstNI | CCWGG | 5 cut(s) | 1506, 3123, 3678, 3735, 4052 |
| BstNSI | RCATGY | 5 cut(s) | 1317, 1346, 1385, 3270, 3939 |
| BstPI | GGTNACC | 1 cut(s) | 938 |
| BstSCI | CCNGG | 9 cut(s) | 402, 1504, 2906, 3121, 3433, 3676, 3733, 4050, 4199 |
| BstSFI | CTRYAG | 2 cut(s) | 1951, 4167 |
| BstSLI | GKGCMC | 3 cut(s) | 2124, 2902, 3017 |
| BstUI | CGCG | 3 cut(s) | 2294, 3447, 3993 |
| BstV2I | GAAGAC | 4 cut(s) | 3251, 3434, 3894, 4272 |
| BstX2I | RGATCY | 4 cut(s) | 267, 594, 1939, 3450 |
| BstYI | RGATCY | 4 cut(s) | 267, 594, 1939, 3450 |
| Bsu15I | ATCGAT | 2 cut(s) | 2258, 2465 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2761 |
| BsuI | GTATCC | 2 cut(s) | 61, 2904 |
| BsuRI | GGCC | 8 cut(s) | 90, 557, 830, 1149, 1409, 1741, 2291, 3719 |
| BsuTUI | ATCGAT | 2 cut(s) | 2258, 2465 |
| BtgI | CCRYGG | 1 cut(s) | 29 |
| BtgZI | GCGATG | 1 cut(s) | 1294 |
| BtrI | CACGTC | 1 cut(s) | 2569 |
| BtsIMutI | CAGTG | 2 cut(s) | 355, 2971 |
| BtuMI | TCGCGA | 1 cut(s) | 3993 |
| Cac8I | GCNNGC | 4 cut(s) | 3046, 3268, 4025, 4132 |
| CciI | TCATGA | 7 cut(s) | 379, 1009, 1048, 1531, 3910, 3970, 4222 |
| CfoI | GCGC | 5 cut(s) | 104, 175, 2768, 2919, 3050 |
| Cfr13I | GGNCC | 5 cut(s) | 1030, 1094, 1408, 3717, 4045 |
| ClaI | ATCGAT | 2 cut(s) | 2258, 2465 |
| CseI | GACGC | 5 cut(s) | 98, 1695, 2438, 2852, 3201 |
| Csp6I | GTAC | 5 cut(s) | 346, 540, 562, 945, 1635 |
| CviQI | GTAC | 5 cut(s) | 346, 540, 562, 945, 1635 |
| DraI | TTTAAA | 3 cut(s) | 1324, 2925, 3163 |
| DraIII | CACNNNGTG | 1 cut(s) | 1288 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3669 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3211 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3669 |
| EaeI | YGGCCR | 3 cut(s) | 555, 828, 2289 |
| Eam1104I | CTCTTC | 6 cut(s) | 186, 507, 616, 2416, 2583, 3081 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3211 |
| EarI | CTCTTC | 6 cut(s) | 186, 507, 616, 2416, 2583, 3081 |
| Eco130I | CCWWGG | 5 cut(s) | 29, 2277, 2415, 2553, 3764 |
| Eco147I | AGGCCT | 1 cut(s) | 1149 |
| Eco31I | GGTCTC | 1 cut(s) | 1533 |
| Eco47I | GGWCC | 3 cut(s) | 1030, 1094, 4045 |
| Eco47III | AGCGCT | 3 cut(s) | 103, 174, 3049 |
| Eco57I | CTGAAG | 2 cut(s) | 2378, 3888 |
| Eco72I | CACGTG | 1 cut(s) | 4007 |
| Eco81I | CCTNAGG | 1 cut(s) | 2761 |
| Eco88I | CYCGRG | 1 cut(s) | 272 |
| Eco91I | GGTNACC | 1 cut(s) | 938 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1408 |
| EcoO65I | GGTNACC | 1 cut(s) | 938 |
| EcoRII | CCWGG | 5 cut(s) | 1504, 3121, 3676, 3733, 4050 |
| EcoT14I | CCWWGG | 5 cut(s) | 29, 2277, 2415, 2553, 3764 |
| EcoT22I | ATGCAT | 3 cut(s) | 235, 1449, 3272 |
| ErhI | CCWWGG | 5 cut(s) | 29, 2277, 2415, 2553, 3764 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 233, 265, 1287, 1319, 2464, 2496, 3510, 3542 |
| FaqI | GGGAC | 2 cut(s) | 1734, 3450 |
| FauI | CCCGC | 1 cut(s) | 3440 |
| FauNDI | CATATG | 1 cut(s) | 633 |
| FbaI | TGATCA | 8 cut(s) | 6, 139, 855, 916, 3115, 3753, 4078, 4216 |
| FblI | GTMKAC | 1 cut(s) | 4209 |
| FspBI | CTAG | 9 cut(s) | 489, 681, 840, 1172, 1809, 2999, 3765, 3956, 4131 |
| GlaI | GCGC | 5 cut(s) | 103, 174, 2767, 2918, 3049 |
| GsaI | CCCAGC | 1 cut(s) | 3145 |
| GsuI | CTGGAG | 1 cut(s) | 1716 |
| HaeII | RGCGCY | 4 cut(s) | 105, 176, 2920, 3051 |
| HaeIII | GGCC | 8 cut(s) | 90, 557, 830, 1149, 1409, 1741, 2291, 3719 |
| HapII | CCGG | 5 cut(s) | 404, 1914, 2907, 3434, 4200 |
| HgaI | GACGC | 5 cut(s) | 98, 1695, 2438, 2852, 3201 |
| HhaI | GCGC | 5 cut(s) | 104, 175, 2768, 2919, 3050 |
| Hin1I | GRCGYC | 2 cut(s) | 1862, 3439 |
| Hin6I | GCGC | 5 cut(s) | 102, 173, 2766, 2917, 3048 |
| HinP1I | GCGC | 5 cut(s) | 102, 173, 2766, 2917, 3048 |
| HincII | GTYRAC | 1 cut(s) | 1002 |
| HindII | GTYRAC | 1 cut(s) | 1002 |
| HindIII | AAGCTT | 4 cut(s) | 602, 1061, 1296, 1362 |
| HpaII | CCGG | 5 cut(s) | 404, 1914, 2907, 3434, 4200 |
| Hpy166II | GTNNAC | 9 cut(s) | 462, 1002, 1483, 1543, 2122, 2971, 3216, 4048, 4210 |
| Hpy8I | GTNNAC | 9 cut(s) | 462, 1002, 1483, 1543, 2122, 2971, 3216, 4048, 4210 |
| Hpy99I | CGWCG | 1 cut(s) | 114 |
| HpyCH4IV | ACGT | 8 cut(s) | 1126, 1862, 1933, 2194, 2204, 2568, 3439, 4006 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 96, 437, 836, 4131, 4169, 4304 |
| HpySE526I | ACGT | 8 cut(s) | 1126, 1862, 1933, 2194, 2204, 2568, 3439, 4006 |
| Hsp92I | GRCGYC | 2 cut(s) | 1862, 3439 |
| HspAI | GCGC | 5 cut(s) | 102, 173, 2766, 2917, 3048 |
| Kpn2I | TCCGGA | 1 cut(s) | 1913 |
| Ksp22I | TGATCA | 8 cut(s) | 6, 139, 855, 916, 3115, 3753, 4078, 4216 |
| LmnI | GCTCC | 2 cut(s) | 2074, 3952 |
| MaeI | CTAG | 9 cut(s) | 489, 681, 840, 1172, 1809, 2999, 3765, 3956, 4131 |
| MaeII | ACGT | 8 cut(s) | 1126, 1862, 1933, 2194, 2204, 2568, 3439, 4006 |
| MaeIII | GTNAC | 5 cut(s) | 938, 1491, 2281, 3025, 3623 |
| MfeI | CAATTG | 9 cut(s) | 675, 699, 995, 2328, 2535, 2604, 2673, 2811, 2880 |
| MflI | RGATCY | 4 cut(s) | 267, 594, 1939, 3450 |
| MhlI | GDGCHC | 4 cut(s) | 1398, 2124, 2902, 3017 |
| MlsI | TGGCCA | 2 cut(s) | 557, 830 |
| MluNI | TGGCCA | 2 cut(s) | 557, 830 |
| MlyI | GAGTC | 4 cut(s) | 203, 457, 2141, 2779 |
| MmeI | TCCRAC | 9 cut(s) | 1052, 1663, 1671, 1963, 2039, 2187, 3116, 3366, 4274 |
| Mox20I | TGGCCA | 2 cut(s) | 557, 830 |
| Mph1103I | ATGCAT | 3 cut(s) | 235, 1449, 3272 |
| MroI | TCCGGA | 1 cut(s) | 1913 |
| MroXI | GAANNNNTTC | 4 cut(s) | 411, 1079, 1299, 3075 |
| MscI | TGGCCA | 2 cut(s) | 557, 830 |
| MslI | CAYNNNNRTG | 8 cut(s) | 131, 1442, 1536, 1592, 2117, 3497, 3915, 4224 |
| Msp20I | TGGCCA | 2 cut(s) | 557, 830 |
| MspA1I | CMGCKG | 3 cut(s) | 3616, 3651, 4166 |
| MspCI | CTTAAG | 2 cut(s) | 1627, 3155 |
| MspI | CCGG | 5 cut(s) | 404, 1914, 2907, 3434, 4200 |
| MspR9I | CCNGG | 9 cut(s) | 404, 1506, 2908, 3123, 3435, 3678, 3735, 4052, 4201 |
| MunI | CAATTG | 9 cut(s) | 675, 699, 995, 2328, 2535, 2604, 2673, 2811, 2880 |
| Mva1269I | GAATGC | 2 cut(s) | 389, 1081 |
| MvaI | CCWGG | 5 cut(s) | 1506, 3123, 3678, 3735, 4052 |
| MvnI | CGCG | 3 cut(s) | 2294, 3447, 3993 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 96, 437, 836, 4131, 4169, 4304 |
| NciI | CCSGG | 4 cut(s) | 404, 2908, 3435, 4201 |
| NcoI | CCATGG | 1 cut(s) | 29 |
| NdeI | CATATG | 1 cut(s) | 633 |
| NheI | GCTAGC | 1 cut(s) | 4130 |
| NlaIV | GGNNCC | 7 cut(s) | 1570, 3014, 3127, 3452, 3718, 4046, 4239 |
| NmeAIII | GCCGAG | 1 cut(s) | 4079 |
| NmuCI | GTSAC | 5 cut(s) | 938, 1491, 2281, 3025, 3623 |
| NruI | TCGCGA | 1 cut(s) | 3993 |
| NsiI | ATGCAT | 3 cut(s) | 235, 1449, 3272 |
| NspI | RCATGY | 5 cut(s) | 1317, 1346, 1385, 3270, 3939 |
| PaeI | GCATGC | 1 cut(s) | 3270 |
| PaeR7I | CTCGAG | 1 cut(s) | 272 |
| PagI | TCATGA | 7 cut(s) | 379, 1009, 1048, 1531, 3910, 3970, 4222 |
| PceI | AGGCCT | 1 cut(s) | 1149 |
| PciI | ACATGT | 2 cut(s) | 1342, 3935 |
| PctI | GAATGC | 2 cut(s) | 389, 1081 |
| PdmI | GAANNNNTTC | 4 cut(s) | 411, 1079, 1299, 3075 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1039 |
| PfoI | TCCNGGA | 2 cut(s) | 2906, 3433 |
| PleI | GAGTC | 4 cut(s) | 202, 457, 2140, 2779 |
| PmaCI | CACGTG | 1 cut(s) | 4007 |
| PmlI | CACGTG | 1 cut(s) | 4007 |
| PpsI | GAGTC | 4 cut(s) | 202, 457, 2140, 2779 |
| Ppu21I | YACGTR | 1 cut(s) | 4007 |
| PscI | ACATGT | 2 cut(s) | 1342, 3935 |
| PshBI | ATTAAT | 1 cut(s) | 3861 |
| PsiI | TTATAA | 1 cut(s) | 1428 |
| Psp1406I | AACGTT | 1 cut(s) | 1933 |
| Psp6I | CCWGG | 5 cut(s) | 1504, 3121, 3676, 3733, 4050 |
| PspCI | CACGTG | 1 cut(s) | 4007 |
| PspEI | GGTNACC | 1 cut(s) | 938 |
| PspFI | CCCAGC | 1 cut(s) | 3141 |
| PspGI | CCWGG | 5 cut(s) | 1504, 3121, 3676, 3733, 4050 |
| PspN4I | GGNNCC | 7 cut(s) | 1570, 3014, 3127, 3452, 3718, 4046, 4239 |
| PspPI | GGNCC | 5 cut(s) | 1030, 1094, 1408, 3717, 4045 |
| PspXI | VCTCGAGB | 1 cut(s) | 272 |
| PsuI | RGATCY | 4 cut(s) | 267, 594, 1939, 3450 |
| PvuII | CAGCTG | 3 cut(s) | 3616, 3651, 4166 |
| RruI | TCGCGA | 1 cut(s) | 3993 |
| RsaI | GTAC | 5 cut(s) | 347, 541, 563, 946, 1636 |
| RsaNI | GTAC | 5 cut(s) | 346, 540, 562, 945, 1635 |
| RseI | CAYNNNNRTG | 8 cut(s) | 131, 1442, 1536, 1592, 2117, 3497, 3915, 4224 |
| Sau96I | GGNCC | 5 cut(s) | 1030, 1094, 1408, 3717, 4045 |
| SchI | GAGTC | 4 cut(s) | 203, 457, 2141, 2779 |
| ScrFI | CCNGG | 9 cut(s) | 404, 1506, 2908, 3123, 3435, 3678, 3735, 4052, 4201 |
| SduI | GDGCHC | 4 cut(s) | 1398, 2124, 2902, 3017 |
| SfcI | CTRYAG | 2 cut(s) | 1951, 4167 |
| Sfr274I | CTCGAG | 1 cut(s) | 272 |
| SinI | GGWCC | 3 cut(s) | 1030, 1094, 4045 |
| SlaI | CTCGAG | 1 cut(s) | 272 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 131, 1442, 1536, 1592, 2117, 3497, 3915, 4224 |
| SmlI | CTYRAG | 8 cut(s) | 272, 1058, 1143, 1627, 1723, 2033, 2102, 3155 |
| SmoI | CTYRAG | 8 cut(s) | 272, 1058, 1143, 1627, 1723, 2033, 2102, 3155 |
| SphI | GCATGC | 1 cut(s) | 3270 |
| SseBI | AGGCCT | 1 cut(s) | 1149 |
| SsiI | CCGC | 7 cut(s) | 443, 1112, 2163, 2292, 2960, 3447, 3882 |
| SspI | AATATT | 5 cut(s) | 1356, 1564, 1760, 1880, 3352 |
| SspMI | CTAG | 9 cut(s) | 489, 681, 840, 1172, 1809, 2999, 3765, 3956, 4131 |
| StuI | AGGCCT | 1 cut(s) | 1149 |
| StyD4I | CCNGG | 9 cut(s) | 402, 1504, 2906, 3121, 3433, 3676, 3733, 4050, 4199 |
| StyI | CCWWGG | 5 cut(s) | 29, 2277, 2415, 2553, 3764 |
| TaiI | ACGT | 8 cut(s) | 1129, 1865, 1936, 2197, 2207, 2571, 3442, 4009 |
| TatI | WGTACW | 2 cut(s) | 345, 539 |
| TauI | GCSGC | 4 cut(s) | 446, 2166, 2294, 2962 |
| TscAI | CASTG | 2 cut(s) | 355, 2971 |
| TseFI | GTSAC | 5 cut(s) | 938, 1491, 2281, 3025, 3623 |
| Tsp45I | GTSAC | 5 cut(s) | 938, 1491, 2281, 3025, 3623 |
| TspGWI | ACGGA | 3 cut(s) | 1107, 2063, 2988 |
| TspRI | CASTG | 2 cut(s) | 355, 2971 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1039 |
| Vha464I | CTTAAG | 2 cut(s) | 1627, 3155 |
| VneI | GTGCAC | 1 cut(s) | 2120 |
| VpaK11BI | GGWCC | 3 cut(s) | 1030, 1094, 4045 |
| VspI | ATTAAT | 1 cut(s) | 3861 |
| XceI | RCATGY | 5 cut(s) | 1317, 1346, 1385, 3270, 3939 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3830 |
| XhoI | CTCGAG | 1 cut(s) | 272 |
| XmaJI | CCTAGG | 1 cut(s) | 3764 |
| XmiI | GTMKAC | 1 cut(s) | 4209 |
| XmnI | GAANNNNTTC | 4 cut(s) | 411, 1079, 1299, 3075 |
| XspI | CTAG | 9 cut(s) | 489, 681, 840, 1172, 1809, 2999, 3765, 3956, 4131 |
| ZraI | GACGTC | 2 cut(s) | 1863, 3440 |
| Zsp2I | ATGCAT | 3 cut(s) | 235, 1449, 3272 |