TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 29 - 192 | 4.2e-56 | TIR domain |
| TIR_2 | PF13676 | 31 - 138 | 1.4e-16 | TIR domain |
| NB-ARC | PF00931 | 211 - 380 | 5.4e-20 | NB-ARC domain |
| AAA_16 | PF13191 | 213 - 322 | 1e-05 | AAA ATPase domain |
| WHD_ROQ1 | PF23282 | 453 - 521 | 4.2e-14 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 741, 1487 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 308 |
| AccBSI | CCGCTC | 1 cut(s) | 734 |
| AciI | CCGC | 2 cut(s) | 734, 1582 |
| AclI | AACGTT | 1 cut(s) | 552 |
| AclWI | GGATC | 4 cut(s) | 368, 381, 454, 963 |
| AcoI | YGGCCR | 1 cut(s) | 603 |
| AcsI | RAATTY | 4 cut(s) | 249, 437, 496, 849 |
| AdeI | CACNNNGTG | 2 cut(s) | 867, 1175 |
| AfaI | GTAC | 6 cut(s) | 70, 387, 579, 636, 1446, 1467 |
| AfeI | AGCGCT | 1 cut(s) | 222 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1204 |
| AflIII | ACRYGT | 2 cut(s) | 414, 1410 |
| AgsI | TTSAA | 6 cut(s) | 239, 288, 323, 421, 764, 1313 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 512 |
| AjiI | CACGTC | 2 cut(s) | 415, 1175 |
| AjnI | CCWGG | 2 cut(s) | 777, 1573 |
| AluBI | AGCT | 6 cut(s) | 102, 284, 307, 536, 1111, 1262 |
| AluI | AGCT | 6 cut(s) | 102, 284, 307, 536, 1111, 1262 |
| Alw21I | GWGCWC | 1 cut(s) | 481 |
| Alw26I | GTCTC | 2 cut(s) | 22, 519 |
| AlwI | GGATC | 4 cut(s) | 368, 381, 454, 963 |
| Aor51HI | AGCGCT | 1 cut(s) | 222 |
| AoxI | GGCC | 4 cut(s) | 603, 814, 1195, 1351 |
| ApeKI | GCWGC | 2 cut(s) | 281, 491 |
| ApoI | RAATTY | 4 cut(s) | 249, 437, 496, 849 |
| AseI | ATTAAT | 1 cut(s) | 542 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1127 |
| AspLEI | GCGC | 1 cut(s) | 223 |
| AsuHPI | GGTGA | 6 cut(s) | 207, 422, 655, 1013, 1027, 1406 |
| AsuII | TTCGAA | 2 cut(s) | 1131, 1324 |
| BalI | TGGCCA | 1 cut(s) | 605 |
| BamHI | GGATCC | 1 cut(s) | 373 |
| BbsI | GAAGAC | 1 cut(s) | 1098 |
| Bbv12I | GWGCWC | 1 cut(s) | 481 |
| BbvI | GCAGC | 2 cut(s) | 293, 503 |
| BccI | CCATC | 4 cut(s) | 578, 659, 1265, 1283 |
| BciT130I | CCWGG | 2 cut(s) | 779, 1575 |
| BciVI | GTATCC | 1 cut(s) | 109 |
| BclI | TGATCA | 1 cut(s) | 1017 |
| BcoDI | GTCTC | 2 cut(s) | 22, 519 |
| BfaI | CTAG | 1 cut(s) | 1370 |
| BfoI | RGCGCY | 1 cut(s) | 224 |
| BfuI | GTATCC | 1 cut(s) | 109 |
| BglII | AGATCT | 1 cut(s) | 649 |
| BisI | GCNGC | 2 cut(s) | 282, 492 |
| BlsI | GCNGC | 2 cut(s) | 283, 493 |
| BmcAI | AGTACT | 3 cut(s) | 70, 579, 1467 |
| Bme1390I | CCNGG | 2 cut(s) | 779, 1575 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 512 |
| BmgBI | CACGTC | 2 cut(s) | 415, 1175 |
| BmiI | GGNNCC | 1 cut(s) | 375 |
| BmrFI | CCNGG | 2 cut(s) | 779, 1575 |
| BmrI | ACTGGG | 2 cut(s) | 608, 988 |
| BmsI | GCATC | 1 cut(s) | 1327 |
| BmuI | ACTGGG | 2 cut(s) | 608, 988 |
| BpiI | GAAGAC | 1 cut(s) | 1098 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 463, 495 |
| BpmI | CTGGAG | 1 cut(s) | 1131 |
| Bpu14I | TTCGAA | 2 cut(s) | 1131, 1324 |
| BpuEI | CTTGAG | 3 cut(s) | 449, 1127, 1176 |
| Bsa29I | ATCGAT | 1 cut(s) | 63 |
| BsaAI | YACGTR | 1 cut(s) | 1411 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 207, 237 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1204 |
| Bse1I | ACTGG | 3 cut(s) | 356, 614, 983 |
| Bse3DI | GCAATG | 1 cut(s) | 1374 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 2 cut(s) | 779, 1575 |
| BseCI | ATCGAT | 1 cut(s) | 63 |
| BseGI | GGATG | 3 cut(s) | 508, 604, 1276 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1204 |
| BseMI | GCAATG | 1 cut(s) | 1374 |
| BseNI | ACTGG | 3 cut(s) | 356, 614, 983 |
| BseXI | GCAGC | 2 cut(s) | 293, 503 |
| BsgI | GTGCAG | 1 cut(s) | 1197 |
| BshFI | GGCC | 4 cut(s) | 605, 816, 1197, 1353 |
| BshVI | ATCGAT | 1 cut(s) | 63 |
| BsiHKAI | GWGCWC | 1 cut(s) | 481 |
| BslFI | GGGAC | 2 cut(s) | 364, 712 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1204 |
| BsmAI | GTCTC | 2 cut(s) | 22, 519 |
| BsmFI | GGGAC | 2 cut(s) | 364, 712 |
| BsmI | GAATGC | 1 cut(s) | 1129 |
| BsnI | GGCC | 4 cut(s) | 605, 816, 1197, 1353 |
| Bsp119I | TTCGAA | 2 cut(s) | 1131, 1324 |
| Bsp1286I | GDGCHC | 1 cut(s) | 481 |
| Bsp143I | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| BspACI | CCGC | 2 cut(s) | 734, 1582 |
| BspANI | GGCC | 4 cut(s) | 605, 816, 1197, 1353 |
| BspDI | ATCGAT | 1 cut(s) | 63 |
| BspHI | TCATGA | 1 cut(s) | 886 |
| BspLI | GGNNCC | 1 cut(s) | 375 |
| BspPI | GGATC | 4 cut(s) | 368, 381, 454, 963 |
| BspT104I | TTCGAA | 2 cut(s) | 1131, 1324 |
| BsrBI | CCGCTC | 1 cut(s) | 734 |
| BsrDI | GCAATG | 1 cut(s) | 1374 |
| BsrI | ACTGG | 3 cut(s) | 356, 614, 983 |
| BssMI | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| Bst2UI | CCWGG | 2 cut(s) | 779, 1575 |
| Bst6I | CTCTTC | 2 cut(s) | 43, 234 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1175 |
| BstBAI | YACGTR | 1 cut(s) | 1411 |
| BstBI | TTCGAA | 2 cut(s) | 1131, 1324 |
| BstC8I | GCNNGC | 5 cut(s) | 754, 1260, 1355, 1580, 1589 |
| BstDEI | CTNAG | 1 cut(s) | 482 |
| BstF5I | GGATG | 3 cut(s) | 508, 604, 1276 |
| BstH2I | RGCGCY | 1 cut(s) | 224 |
| BstHHI | GCGC | 1 cut(s) | 223 |
| BstKTI | GATC | 8 cut(s) | 139, 187, 376, 462, 652, 958, 1020, 1252 |
| BstMAI | GTCTC | 2 cut(s) | 22, 519 |
| BstMBI | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1175, 1584, 1588 |
| BstNI | CCWGG | 2 cut(s) | 779, 1575 |
| BstNSI | RCATGY | 1 cut(s) | 1383 |
| BstSCI | CCNGG | 2 cut(s) | 777, 1573 |
| BstV1I | GCAGC | 2 cut(s) | 293, 503 |
| BstV2I | GAAGAC | 1 cut(s) | 1098 |
| BstX2I | RGATCY | 3 cut(s) | 373, 459, 649 |
| BstYI | RGATCY | 3 cut(s) | 373, 459, 649 |
| Bsu15I | ATCGAT | 1 cut(s) | 63 |
| BsuI | GTATCC | 1 cut(s) | 109 |
| BsuRI | GGCC | 4 cut(s) | 605, 816, 1197, 1353 |
| BsuTUI | ATCGAT | 1 cut(s) | 63 |
| BtrI | CACGTC | 2 cut(s) | 415, 1175 |
| BtsCI | GGATG | 3 cut(s) | 508, 604, 1276 |
| BtsIMutI | CAGTG | 2 cut(s) | 1070, 1566 |
| Cac8I | GCNNGC | 5 cut(s) | 754, 1260, 1355, 1580, 1589 |
| CciI | TCATGA | 1 cut(s) | 886 |
| CfoI | GCGC | 1 cut(s) | 223 |
| ClaI | ATCGAT | 1 cut(s) | 63 |
| CseI | GACGC | 1 cut(s) | 1444 |
| Csp6I | GTAC | 6 cut(s) | 69, 386, 578, 635, 1445, 1466 |
| CviAII | CATG | 5 cut(s) | 383, 468, 887, 1341, 1380 |
| CviQI | GTAC | 6 cut(s) | 69, 386, 578, 635, 1445, 1466 |
| DdeI | CTNAG | 1 cut(s) | 482 |
| DpnI | GATC | 8 cut(s) | 138, 186, 375, 461, 651, 957, 1019, 1251 |
| DpnII | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| DraIII | CACNNNGTG | 2 cut(s) | 867, 1175 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 308 |
| DriI | GACNNNNNGTC | 1 cut(s) | 512 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 308 |
| EaeI | YGGCCR | 1 cut(s) | 603 |
| Eam1104I | CTCTTC | 2 cut(s) | 43, 234 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 512 |
| EarI | CTCTTC | 2 cut(s) | 43, 234 |
| Eco147I | AGGCCT | 2 cut(s) | 816, 1197 |
| Eco32I | GATATC | 1 cut(s) | 565 |
| Eco47III | AGCGCT | 1 cut(s) | 222 |
| EcoRII | CCWGG | 2 cut(s) | 777, 1573 |
| EcoRV | GATATC | 1 cut(s) | 565 |
| EcoT22I | ATGCAT | 1 cut(s) | 1342 |
| FaeI | CATG | 5 cut(s) | 386, 471, 890, 1344, 1383 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 920, 952 |
| FaqI | GGGAC | 2 cut(s) | 364, 712 |
| FatI | CATG | 5 cut(s) | 382, 467, 886, 1340, 1379 |
| FbaI | TGATCA | 1 cut(s) | 1017 |
| Fnu4HI | GCNGC | 2 cut(s) | 282, 492 |
| FokI | GGATG | 3 cut(s) | 495, 611, 1283 |
| Fsp4HI | GCNGC | 2 cut(s) | 282, 492 |
| FspBI | CTAG | 1 cut(s) | 1370 |
| GlaI | GCGC | 1 cut(s) | 222 |
| GluI | GCNGC | 2 cut(s) | 282, 492 |
| GsuI | CTGGAG | 1 cut(s) | 1131 |
| HaeII | RGCGCY | 1 cut(s) | 224 |
| HaeIII | GGCC | 4 cut(s) | 605, 816, 1197, 1353 |
| HgaI | GACGC | 1 cut(s) | 1444 |
| HhaI | GCGC | 1 cut(s) | 223 |
| Hin1II | CATG | 5 cut(s) | 386, 471, 890, 1344, 1383 |
| Hin6I | GCGC | 1 cut(s) | 221 |
| HinP1I | GCGC | 1 cut(s) | 221 |
| HincII | GTYRAC | 1 cut(s) | 160 |
| HindII | GTYRAC | 1 cut(s) | 160 |
| HinfI | GANTC | 8 cut(s) | 168, 242, 316, 894, 910, 931, 1280, 1559 |
| HphI | GGTGA | 6 cut(s) | 207, 422, 655, 1013, 1027, 1406 |
| Hpy166II | GTNNAC | 2 cut(s) | 160, 1552 |
| Hpy188I | TCNGA | 1 cut(s) | 1506 |
| Hpy188III | TCNNGA | 8 cut(s) | 246, 313, 504, 705, 887, 944, 1148, 1451 |
| Hpy8I | GTNNAC | 2 cut(s) | 160, 1552 |
| Hpy99I | CGWCG | 3 cut(s) | 681, 1176, 1438 |
| HpyAV | CCTTC | 7 cut(s) | 84, 187, 515, 806, 884, 1138, 1208 |
| HpyCH4IV | ACGT | 5 cut(s) | 414, 552, 1174, 1410, 1447 |
| HpyCH4V | TGCA | 8 cut(s) | 281, 435, 728, 746, 1178, 1340, 1357, 1379 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1175, 1584, 1588 |
| HpyF3I | CTNAG | 1 cut(s) | 482 |
| HpySE526I | ACGT | 5 cut(s) | 414, 552, 1174, 1410, 1447 |
| Hsp92II | CATG | 5 cut(s) | 386, 471, 890, 1344, 1383 |
| HspAI | GCGC | 1 cut(s) | 221 |
| Ksp22I | TGATCA | 1 cut(s) | 1017 |
| Kzo9I | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| LmnI | GCTCC | 3 cut(s) | 228, 964, 1584 |
| Lsp1109I | GCAGC | 2 cut(s) | 293, 503 |
| LweI | GCATC | 1 cut(s) | 1327 |
| MaeI | CTAG | 1 cut(s) | 1370 |
| MaeII | ACGT | 5 cut(s) | 414, 552, 1174, 1410, 1447 |
| MaeIII | GTNAC | 3 cut(s) | 410, 1274, 1413 |
| MalI | GATC | 8 cut(s) | 138, 186, 375, 461, 651, 957, 1019, 1251 |
| MbiI | CCGCTC | 1 cut(s) | 734 |
| MboI | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| MfeI | CAATTG | 4 cut(s) | 234, 723, 747, 959 |
| MflI | RGATCY | 3 cut(s) | 373, 459, 649 |
| MhlI | GDGCHC | 1 cut(s) | 481 |
| MlsI | TGGCCA | 1 cut(s) | 605 |
| MluNI | TGGCCA | 1 cut(s) | 605 |
| MlyI | GAGTC | 1 cut(s) | 251 |
| MmeI | TCCRAC | 3 cut(s) | 598, 847, 1100 |
| Mox20I | TGGCCA | 1 cut(s) | 605 |
| Mph1103I | ATGCAT | 1 cut(s) | 1342 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1127 |
| MscI | TGGCCA | 1 cut(s) | 605 |
| MseI | TTAA | 8 cut(s) | 542, 906, 938, 971, 1212, 1389, 1424, 1461 |
| Msp20I | TGGCCA | 1 cut(s) | 605 |
| MspR9I | CCNGG | 2 cut(s) | 779, 1575 |
| MunI | CAATTG | 4 cut(s) | 234, 723, 747, 959 |
| Mva1269I | GAATGC | 1 cut(s) | 1129 |
| MvaI | CCWGG | 2 cut(s) | 779, 1575 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1175, 1584, 1588 |
| NdeII | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| NlaIII | CATG | 5 cut(s) | 386, 471, 890, 1344, 1383 |
| NlaIV | GGNNCC | 1 cut(s) | 375 |
| NmuCI | GTSAC | 1 cut(s) | 410 |
| NsiI | ATGCAT | 1 cut(s) | 1342 |
| NspI | RCATGY | 1 cut(s) | 1383 |
| NspV | TTCGAA | 2 cut(s) | 1131, 1324 |
| PagI | TCATGA | 1 cut(s) | 886 |
| PceI | AGGCCT | 2 cut(s) | 816, 1197 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1284 |
| PctI | GAATGC | 1 cut(s) | 1129 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1127 |
| PfeI | GAWTC | 7 cut(s) | 168, 316, 894, 910, 931, 1280, 1559 |
| PkrI | GCNGC | 2 cut(s) | 283, 493 |
| PleI | GAGTC | 1 cut(s) | 250 |
| PpsI | GAGTC | 1 cut(s) | 250 |
| Ppu21I | YACGTR | 1 cut(s) | 1411 |
| PshBI | ATTAAT | 1 cut(s) | 542 |
| PsiI | TTATAA | 2 cut(s) | 741, 1487 |
| Psp1406I | AACGTT | 1 cut(s) | 552 |
| Psp6I | CCWGG | 2 cut(s) | 777, 1573 |
| PspGI | CCWGG | 2 cut(s) | 777, 1573 |
| PspN4I | GGNNCC | 1 cut(s) | 375 |
| PsuI | RGATCY | 3 cut(s) | 373, 459, 649 |
| RsaI | GTAC | 6 cut(s) | 70, 387, 579, 636, 1446, 1467 |
| RsaNI | GTAC | 6 cut(s) | 69, 386, 578, 635, 1445, 1466 |
| SaqAI | TTAA | 8 cut(s) | 542, 906, 938, 971, 1212, 1389, 1424, 1461 |
| SatI | GCNGC | 2 cut(s) | 282, 492 |
| Sau3AI | GATC | 8 cut(s) | 136, 184, 373, 459, 649, 955, 1017, 1249 |
| ScaI | AGTACT | 3 cut(s) | 70, 579, 1467 |
| SchI | GAGTC | 1 cut(s) | 251 |
| ScrFI | CCNGG | 2 cut(s) | 779, 1575 |
| SduI | GDGCHC | 1 cut(s) | 481 |
| SfaNI | GCATC | 1 cut(s) | 1327 |
| SfuI | TTCGAA | 2 cut(s) | 1131, 1324 |
| SmlI | CTYRAG | 3 cut(s) | 428, 1106, 1191 |
| SmoI | CTYRAG | 3 cut(s) | 428, 1106, 1191 |
| SseBI | AGGCCT | 2 cut(s) | 816, 1197 |
| SsiI | CCGC | 2 cut(s) | 734, 1582 |
| SspI | AATATT | 2 cut(s) | 1216, 1422 |
| SspMI | CTAG | 1 cut(s) | 1370 |
| StuI | AGGCCT | 2 cut(s) | 816, 1197 |
| StyD4I | CCNGG | 2 cut(s) | 777, 1573 |
| TaiI | ACGT | 5 cut(s) | 417, 555, 1177, 1413, 1450 |
| TaqI | TCGA | 8 cut(s) | 63, 441, 663, 879, 990, 1131, 1324, 1433 |
| TatI | WGTACW | 3 cut(s) | 68, 577, 1465 |
| TfiI | GAWTC | 7 cut(s) | 168, 316, 894, 910, 931, 1280, 1559 |
| Tru1I | TTAA | 8 cut(s) | 542, 906, 938, 971, 1212, 1389, 1424, 1461 |
| Tru9I | TTAA | 8 cut(s) | 542, 906, 938, 971, 1212, 1389, 1424, 1461 |
| TscAI | CASTG | 2 cut(s) | 1070, 1573 |
| TseFI | GTSAC | 1 cut(s) | 410 |
| TseI | GCWGC | 2 cut(s) | 281, 491 |
| Tsp45I | GTSAC | 1 cut(s) | 410 |
| TspDTI | ATGAA | 8 cut(s) | 17, 169, 546, 875, 903, 1089, 1529, 1617 |
| TspGWI | ACGGA | 2 cut(s) | 366, 1191 |
| TspRI | CASTG | 2 cut(s) | 1070, 1573 |
| VspI | ATTAAT | 1 cut(s) | 542 |
| XapI | RAATTY | 4 cut(s) | 249, 437, 496, 849 |
| XceI | RCATGY | 1 cut(s) | 1383 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1127 |
| XspI | CTAG | 1 cut(s) | 1370 |
| ZrmI | AGTACT | 3 cut(s) | 70, 579, 1467 |
| Zsp2I | ATGCAT | 1 cut(s) | 1342 |