TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 79 - 188 | 3.3e-16 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 163 - 233 | 6.5e-15 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 197 - 256 | 1.1e-13 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 222 - 296 | 8.5e-15 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 300 - 371 | 5.5e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 393 - 486 | 2.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 408 - 507 | 1.2e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1680 |
| AatII | GACGTC | 1 cut(s) | 62 |
| AccB1I | GGYRCC | 1 cut(s) | 1116 |
| AccI | GTMKAC | 1 cut(s) | 2226 |
| AccII | CGCG | 2 cut(s) | 491, 1304 |
| AccIII | TCCGGA | 1 cut(s) | 110 |
| AciI | CCGC | 5 cut(s) | 360, 823, 1064, 1905, 1982 |
| AclWI | GGATC | 2 cut(s) | 177, 1998 |
| AcsI | RAATTY | 7 cut(s) | 67, 154, 304, 1370, 1770, 1782, 1792 |
| AcuI | CTGAAG | 3 cut(s) | 260, 960, 1911 |
| AcvI | CACGTG | 1 cut(s) | 2030 |
| AcyI | GRCGYC | 1 cut(s) | 59 |
| AfeI | AGCGCT | 1 cut(s) | 1153 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1126, 1239, 1314 |
| AflIII | ACRYGT | 5 cut(s) | 489, 558, 696, 903, 1958 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1303, 1594 |
| AjiI | CACGTC | 1 cut(s) | 904 |
| AjnI | CCWGG | 3 cut(s) | 1213, 1744, 2067 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1005, 1037 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1683, 1715 |
| AluBI | AGCT | 9 cut(s) | 274, 280, 766, 1237, 1627, 1669, 1931, 1978, 2183 |
| AluI | AGCT | 9 cut(s) | 274, 280, 766, 1237, 1627, 1669, 1931, 1978, 2183 |
| Alw26I | GTCTC | 5 cut(s) | 103, 749, 1279, 1413, 1688 |
| AlwI | GGATC | 2 cut(s) | 177, 1998 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1277 |
| Ama87I | CYCGRG | 2 cut(s) | 100, 1687 |
| Aor13HI | TCCGGA | 1 cut(s) | 110 |
| Aor51HI | AGCGCT | 1 cut(s) | 1153 |
| AoxI | GGCC | 1 cut(s) | 1728 |
| ApeKI | GCWGC | 3 cut(s) | 219, 1084, 2180 |
| ApoI | RAATTY | 7 cut(s) | 67, 154, 304, 1370, 1770, 1782, 1792 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1257, 1289 |
| AseI | ATTAAT | 2 cut(s) | 800, 1884 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1179 |
| AspA2I | CCTAGG | 1 cut(s) | 1787 |
| AspLEI | GCGC | 2 cut(s) | 1154, 1304 |
| AspS9I | GGNCC | 2 cut(s) | 1728, 2062 |
| AsuC2I | CCSGG | 4 cut(s) | 1527, 1688, 1689, 2218 |
| AsuHPI | GGTGA | 5 cut(s) | 490, 1141, 1733, 1871, 2120 |
| AsuII | TTCGAA | 1 cut(s) | 1537 |
| AsuNHI | GCTAGC | 2 cut(s) | 1978, 2147 |
| AvaI | CYCGRG | 2 cut(s) | 100, 1687 |
| AvaII | GGWCC | 1 cut(s) | 2062 |
| AvrII | CCTAGG | 1 cut(s) | 1787 |
| BaeGI | GKGCMC | 1 cut(s) | 1121 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 28, 61 |
| BanI | GGYRCC | 1 cut(s) | 1116 |
| BauI | CACGAG | 2 cut(s) | 889, 2121 |
| BbrPI | CACGTG | 1 cut(s) | 2030 |
| BbsI | GAAGAC | 3 cut(s) | 1343, 1917, 2301 |
| BbvI | GCAGC | 3 cut(s) | 206, 1071, 2192 |
| BccI | CCATC | 7 cut(s) | 319, 650, 926, 1564, 1597, 1792, 2237 |
| BceAI | ACGGC | 1 cut(s) | 1654 |
| BciT130I | CCWGG | 3 cut(s) | 1215, 1746, 2069 |
| BciVI | GTATCC | 1 cut(s) | 29 |
| BclI | TGATCA | 4 cut(s) | 1207, 1776, 2095, 2233 |
| BcnI | CCSGG | 4 cut(s) | 1527, 1688, 1689, 2218 |
| BcoDI | GTCTC | 5 cut(s) | 103, 749, 1279, 1413, 1688 |
| BfaI | CTAG | 5 cut(s) | 6, 1094, 1788, 1979, 2148 |
| BfmI | CTRYAG | 1 cut(s) | 2184 |
| BfoI | RGCGCY | 1 cut(s) | 1155 |
| BfuI | GTATCC | 1 cut(s) | 29 |
| BisI | GCNGC | 5 cut(s) | 220, 361, 1064, 1085, 2181 |
| BlnI | CCTAGG | 1 cut(s) | 1787 |
| BlsI | GCNGC | 5 cut(s) | 221, 362, 1065, 1086, 2182 |
| Bme1390I | CCNGG | 7 cut(s) | 1215, 1527, 1688, 1689, 1746, 2069, 2218 |
| Bme18I | GGWCC | 1 cut(s) | 2062 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1303, 1594 |
| BmeT110I | CYCGRG | 2 cut(s) | 100, 1687 |
| BmgBI | CACGTC | 1 cut(s) | 904 |
| BmgT120I | GGNCC | 2 cut(s) | 1728, 2062 |
| BmiI | GGNNCC | 5 cut(s) | 1118, 1219, 1729, 2063, 2268 |
| BmrFI | CCNGG | 7 cut(s) | 1215, 1527, 1688, 1689, 1746, 2069, 2218 |
| BmsI | GCATC | 7 cut(s) | 24, 104, 610, 748, 1250, 1371, 2198 |
| BmtI | GCTAGC | 2 cut(s) | 1982, 2151 |
| BpiI | GAAGAC | 3 cut(s) | 1343, 1917, 2301 |
| Bpu14I | TTCGAA | 1 cut(s) | 1537 |
| BpuEI | CTTGAG | 2 cut(s) | 251, 320 |
| BpuMI | CCSGG | 4 cut(s) | 1527, 1688, 1689, 2218 |
| Bsa29I | ATCGAT | 1 cut(s) | 455 |
| BsaAI | YACGTR | 1 cut(s) | 2030 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2094, 2235 |
| BsaHI | GRCGYC | 1 cut(s) | 59 |
| BsaJI | CCNNGG | 5 cut(s) | 474, 750, 1687, 1787, 2217 |
| BsaWI | WCCGGW | 1 cut(s) | 110 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2028, 2058 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1126, 1239, 1314 |
| Bse1I | ACTGG | 2 cut(s) | 1131, 1512 |
| Bse3DI | GCAATG | 3 cut(s) | 1613, 2149, 2334 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2094, 2235 |
| BseAI | TCCGGA | 1 cut(s) | 110 |
| BseBI | CCWGG | 3 cut(s) | 1215, 1746, 2069 |
| BseCI | ATCGAT | 1 cut(s) | 455 |
| BseDI | CCNNGG | 5 cut(s) | 474, 750, 1687, 1787, 2217 |
| BseGI | GGATG | 7 cut(s) | 119, 1046, 1210, 1265, 1390, 1468, 2272 |
| BseJI | GATNNNNATC | 2 cut(s) | 2094, 2235 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1126, 1239, 1314 |
| BseMI | GCAATG | 3 cut(s) | 1613, 2149, 2334 |
| BseMII | CTCAG | 1 cut(s) | 2333 |
| BseNI | ACTGG | 2 cut(s) | 1131, 1512 |
| BseSI | GKGCMC | 1 cut(s) | 1121 |
| BseXI | GCAGC | 3 cut(s) | 206, 1071, 2192 |
| BsgI | GTGCAG | 1 cut(s) | 1191 |
| Bsh1236I | CGCG | 2 cut(s) | 491, 1304 |
| BshFI | GGCC | 1 cut(s) | 1730 |
| BshNI | GGYRCC | 1 cut(s) | 1116 |
| BshVI | ATCGAT | 1 cut(s) | 455 |
| BsiHKCI | CYCGRG | 2 cut(s) | 100, 1687 |
| BsiSI | CCGG | 5 cut(s) | 111, 1355, 1526, 1688, 2217 |
| BslFI | GGGAC | 1 cut(s) | 1542 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1126, 1239, 1314 |
| BsmAI | GTCTC | 5 cut(s) | 103, 749, 1279, 1413, 1688 |
| BsmFI | GGGAC | 1 cut(s) | 1542 |
| BsnI | GGCC | 1 cut(s) | 1730 |
| BsoBI | CYCGRG | 2 cut(s) | 100, 1687 |
| Bsp119I | TTCGAA | 1 cut(s) | 1537 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1121 |
| Bsp13I | TCCGGA | 1 cut(s) | 110 |
| Bsp143I | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| BspACI | CCGC | 5 cut(s) | 360, 823, 1064, 1905, 1982 |
| BspANI | GGCC | 1 cut(s) | 1730 |
| BspCNI | CTCAG | 1 cut(s) | 2334 |
| BspDI | ATCGAT | 1 cut(s) | 455 |
| BspEI | TCCGGA | 1 cut(s) | 110 |
| BspFNI | CGCG | 2 cut(s) | 491, 1304 |
| BspHI | TCATGA | 3 cut(s) | 1933, 1993, 2239 |
| BspLI | GGNNCC | 5 cut(s) | 1118, 1219, 1729, 2063, 2268 |
| BspOI | GCTAGC | 2 cut(s) | 1982, 2151 |
| BspPI | GGATC | 2 cut(s) | 177, 1998 |
| BspT104I | TTCGAA | 1 cut(s) | 1537 |
| BspT107I | GGYRCC | 1 cut(s) | 1116 |
| BsrDI | GCAATG | 3 cut(s) | 1613, 2149, 2334 |
| BsrI | ACTGG | 2 cut(s) | 1131, 1512 |
| BssECI | CCNNGG | 5 cut(s) | 474, 750, 1687, 1787, 2217 |
| BssMI | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| BssNI | GRCGYC | 1 cut(s) | 59 |
| BssSI | CACGAG | 2 cut(s) | 889, 2121 |
| BssT1I | CCWWGG | 3 cut(s) | 474, 750, 1787 |
| Bst2BI | CACGAG | 2 cut(s) | 889, 2121 |
| Bst2UI | CCWGG | 3 cut(s) | 1215, 1746, 2069 |
| Bst4CI | ACNGT | 8 cut(s) | 149, 247, 1060, 1070, 1227, 1242, 1876, 2040 |
| Bst6I | CTCTTC | 2 cut(s) | 611, 1185 |
| BstACI | GRCGYC | 1 cut(s) | 59 |
| BstBAI | YACGTR | 1 cut(s) | 2030 |
| BstBI | TTCGAA | 1 cut(s) | 1537 |
| BstC8I | GCNNGC | 4 cut(s) | 1150, 1360, 1980, 2149 |
| BstDEI | CTNAG | 2 cut(s) | 1052, 2342 |
| BstEII | GGTNACC | 1 cut(s) | 1748 |
| BstF5I | GGATG | 7 cut(s) | 119, 1046, 1210, 1265, 1390, 1468, 2272 |
| BstFNI | CGCG | 2 cut(s) | 491, 1304 |
| BstH2I | RGCGCY | 1 cut(s) | 1155 |
| BstHHI | GCGC | 2 cut(s) | 1154, 1304 |
| BstKTI | GATC | 7 cut(s) | 172, 1210, 1390, 1779, 1993, 2098, 2236 |
| BstMAI | GTCTC | 5 cut(s) | 103, 749, 1279, 1413, 1688 |
| BstMBI | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1243, 1624, 2148, 2186, 2333 |
| BstNI | CCWGG | 3 cut(s) | 1215, 1746, 2069 |
| BstNSI | RCATGY | 4 cut(s) | 562, 700, 1362, 1962 |
| BstPI | GGTNACC | 1 cut(s) | 1748 |
| BstSCI | CCNGG | 7 cut(s) | 1213, 1525, 1686, 1687, 1744, 2067, 2216 |
| BstSFI | CTRYAG | 1 cut(s) | 2184 |
| BstSLI | GKGCMC | 1 cut(s) | 1121 |
| BstUI | CGCG | 2 cut(s) | 491, 1304 |
| BstV1I | GCAGC | 3 cut(s) | 206, 1071, 2192 |
| BstV2I | GAAGAC | 3 cut(s) | 1343, 1917, 2301 |
| Bsu15I | ATCGAT | 1 cut(s) | 455 |
| BsuI | GTATCC | 1 cut(s) | 29 |
| BsuRI | GGCC | 1 cut(s) | 1730 |
| BsuTUI | ATCGAT | 1 cut(s) | 455 |
| BtrI | CACGTC | 1 cut(s) | 904 |
| BtsCI | GGATG | 7 cut(s) | 119, 1046, 1210, 1265, 1390, 1468, 2272 |
| BtsIMutI | CAGTG | 3 cut(s) | 145, 1075, 1223 |
| Cac8I | GCNNGC | 4 cut(s) | 1150, 1360, 1980, 2149 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1277 |
| CciI | TCATGA | 3 cut(s) | 1933, 1993, 2239 |
| CfoI | GCGC | 2 cut(s) | 1154, 1304 |
| Cfr13I | GGNCC | 2 cut(s) | 1728, 2062 |
| Cfr9I | CCCGGG | 1 cut(s) | 1687 |
| ClaI | ATCGAT | 1 cut(s) | 455 |
| CseI | GACGC | 4 cut(s) | 32, 497, 980, 1293 |
| DdeI | CTNAG | 2 cut(s) | 1052, 2342 |
| DpnI | GATC | 7 cut(s) | 171, 1209, 1389, 1778, 1992, 2097, 2235 |
| DpnII | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| DraI | TTTAAA | 2 cut(s) | 1029, 1255 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1680 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1303, 1594 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1680 |
| Eam1104I | CTCTTC | 2 cut(s) | 611, 1185 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1303, 1594 |
| EarI | CTCTTC | 2 cut(s) | 611, 1185 |
| Eco130I | CCWWGG | 3 cut(s) | 474, 750, 1787 |
| Eco47I | GGWCC | 1 cut(s) | 2062 |
| Eco47III | AGCGCT | 1 cut(s) | 1153 |
| Eco57I | CTGAAG | 3 cut(s) | 260, 960, 1911 |
| Eco72I | CACGTG | 1 cut(s) | 2030 |
| Eco88I | CYCGRG | 2 cut(s) | 100, 1687 |
| Eco91I | GGTNACC | 1 cut(s) | 1748 |
| EcoO65I | GGTNACC | 1 cut(s) | 1748 |
| EcoRII | CCWGG | 3 cut(s) | 1213, 1744, 2067 |
| EcoT14I | CCWWGG | 3 cut(s) | 474, 750, 1787 |
| EcoT22I | ATGCAT | 1 cut(s) | 1364 |
| ErhI | CCWWGG | 3 cut(s) | 474, 750, 1787 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1602, 1634 |
| FaqI | GGGAC | 1 cut(s) | 1542 |
| FauI | CCCGC | 1 cut(s) | 816 |
| FbaI | TGATCA | 4 cut(s) | 1207, 1776, 2095, 2233 |
| FblI | GTMKAC | 1 cut(s) | 2226 |
| Fnu4HI | GCNGC | 5 cut(s) | 220, 361, 1064, 1085, 2181 |
| FokI | GGATG | 7 cut(s) | 126, 1053, 1197, 1272, 1397, 1475, 2259 |
| Fsp4HI | GCNGC | 5 cut(s) | 220, 361, 1064, 1085, 2181 |
| FspBI | CTAG | 5 cut(s) | 6, 1094, 1788, 1979, 2148 |
| GlaI | GCGC | 2 cut(s) | 1153, 1303 |
| GluI | GCNGC | 5 cut(s) | 220, 361, 1064, 1085, 2181 |
| HaeII | RGCGCY | 1 cut(s) | 1155 |
| HaeIII | GGCC | 1 cut(s) | 1730 |
| HapII | CCGG | 5 cut(s) | 111, 1355, 1526, 1688, 2217 |
| HgaI | GACGC | 4 cut(s) | 32, 497, 980, 1293 |
| HhaI | GCGC | 2 cut(s) | 1154, 1304 |
| Hin1I | GRCGYC | 1 cut(s) | 59 |
| Hin6I | GCGC | 2 cut(s) | 1152, 1302 |
| HinP1I | GCGC | 2 cut(s) | 1152, 1302 |
| HindIII | AAGCTT | 1 cut(s) | 1667 |
| HinfI | GANTC | 9 cut(s) | 136, 183, 208, 329, 463, 670, 946, 1175, 1291 |
| HpaII | CCGG | 5 cut(s) | 111, 1355, 1526, 1688, 2217 |
| HphI | GGTGA | 5 cut(s) | 490, 1141, 1733, 1871, 2120 |
| Hpy166II | GTNNAC | 5 cut(s) | 1075, 1308, 1657, 2065, 2227 |
| Hpy8I | GTNNAC | 5 cut(s) | 1075, 1308, 1657, 2065, 2227 |
| HpyCH4III | ACNGT | 8 cut(s) | 149, 247, 1060, 1070, 1227, 1242, 1876, 2040 |
| HpyCH4IV | ACGT | 5 cut(s) | 59, 391, 401, 903, 2029 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1243, 1624, 2148, 2186, 2333 |
| HpyF3I | CTNAG | 2 cut(s) | 1052, 2342 |
| HpySE526I | ACGT | 5 cut(s) | 59, 391, 401, 903, 2029 |
| Hsp92I | GRCGYC | 1 cut(s) | 59 |
| HspAI | GCGC | 2 cut(s) | 1152, 1302 |
| Kpn2I | TCCGGA | 1 cut(s) | 110 |
| Ksp22I | TGATCA | 4 cut(s) | 1207, 1776, 2095, 2233 |
| Kzo9I | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| LmnI | GCTCC | 3 cut(s) | 271, 1975, 2049 |
| Lsp1109I | GCAGC | 3 cut(s) | 206, 1071, 2192 |
| LweI | GCATC | 7 cut(s) | 24, 104, 610, 748, 1250, 1371, 2198 |
| MaeI | CTAG | 5 cut(s) | 6, 1094, 1788, 1979, 2148 |
| MaeII | ACGT | 5 cut(s) | 59, 391, 401, 903, 2029 |
| MaeIII | GTNAC | 6 cut(s) | 478, 1129, 1634, 1748, 1870, 2005 |
| MalI | GATC | 7 cut(s) | 171, 1209, 1389, 1778, 1992, 2097, 2235 |
| MboI | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| MfeI | CAATTG | 6 cut(s) | 525, 663, 732, 870, 939, 1008 |
| MhlI | GDGCHC | 1 cut(s) | 1121 |
| MluI | ACGCGT | 1 cut(s) | 489 |
| MlyI | GAGTC | 2 cut(s) | 217, 338 |
| MmeI | TCCRAC | 8 cut(s) | 13, 160, 266, 384, 1208, 1362, 1458, 2303 |
| Mph1103I | ATGCAT | 1 cut(s) | 1364 |
| MroI | TCCGGA | 1 cut(s) | 110 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1179 |
| MslI | CAYNNNNRTG | 4 cut(s) | 314, 1589, 1938, 2241 |
| MspA1I | CMGCKG | 2 cut(s) | 1627, 2183 |
| MspI | CCGG | 5 cut(s) | 111, 1355, 1526, 1688, 2217 |
| MspR9I | CCNGG | 7 cut(s) | 1215, 1527, 1688, 1689, 1746, 2069, 2218 |
| MunI | CAATTG | 6 cut(s) | 525, 663, 732, 870, 939, 1008 |
| MvaI | CCWGG | 3 cut(s) | 1215, 1746, 2069 |
| MvnI | CGCG | 2 cut(s) | 491, 1304 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1243, 1624, 2148, 2186, 2333 |
| NciI | CCSGG | 4 cut(s) | 1527, 1688, 1689, 2218 |
| NdeII | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| NheI | GCTAGC | 2 cut(s) | 1978, 2147 |
| NlaIV | GGNNCC | 5 cut(s) | 1118, 1219, 1729, 2063, 2268 |
| NmeAIII | GCCGAG | 1 cut(s) | 2096 |
| NmuCI | GTSAC | 5 cut(s) | 478, 1129, 1634, 1870, 2005 |
| NsiI | ATGCAT | 1 cut(s) | 1364 |
| NspI | RCATGY | 4 cut(s) | 562, 700, 1362, 1962 |
| NspV | TTCGAA | 1 cut(s) | 1537 |
| PaeI | GCATGC | 1 cut(s) | 1362 |
| PagI | TCATGA | 3 cut(s) | 1933, 1993, 2239 |
| PciI | ACATGT | 3 cut(s) | 558, 696, 1958 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1179 |
| PfeI | GAWTC | 7 cut(s) | 136, 183, 463, 670, 946, 1175, 1291 |
| PfoI | TCCNGGA | 1 cut(s) | 1525 |
| PkrI | GCNGC | 5 cut(s) | 221, 362, 1065, 1086, 2182 |
| PleI | GAGTC | 2 cut(s) | 216, 337 |
| PmaCI | CACGTG | 1 cut(s) | 2030 |
| PmlI | CACGTG | 1 cut(s) | 2030 |
| PpsI | GAGTC | 2 cut(s) | 216, 337 |
| Ppu21I | YACGTR | 1 cut(s) | 2030 |
| PscI | ACATGT | 3 cut(s) | 558, 696, 1958 |
| PshBI | ATTAAT | 2 cut(s) | 800, 1884 |
| Psp6I | CCWGG | 3 cut(s) | 1213, 1744, 2067 |
| PspCI | CACGTG | 1 cut(s) | 2030 |
| PspEI | GGTNACC | 1 cut(s) | 1748 |
| PspGI | CCWGG | 3 cut(s) | 1213, 1744, 2067 |
| PspN4I | GGNNCC | 5 cut(s) | 1118, 1219, 1729, 2063, 2268 |
| PspPI | GGNCC | 2 cut(s) | 1728, 2062 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1277 |
| PvuII | CAGCTG | 2 cut(s) | 1627, 2183 |
| RseI | CAYNNNNRTG | 4 cut(s) | 314, 1589, 1938, 2241 |
| SatI | GCNGC | 5 cut(s) | 220, 361, 1064, 1085, 2181 |
| Sau3AI | GATC | 7 cut(s) | 169, 1207, 1387, 1776, 1990, 2095, 2233 |
| Sau96I | GGNCC | 2 cut(s) | 1728, 2062 |
| SchI | GAGTC | 2 cut(s) | 217, 338 |
| ScrFI | CCNGG | 7 cut(s) | 1215, 1527, 1688, 1689, 1746, 2069, 2218 |
| SduI | GDGCHC | 1 cut(s) | 1121 |
| SfaNI | GCATC | 7 cut(s) | 24, 104, 610, 748, 1250, 1371, 2198 |
| SfcI | CTRYAG | 1 cut(s) | 2184 |
| SfuI | TTCGAA | 1 cut(s) | 1537 |
| SinI | GGWCC | 1 cut(s) | 2062 |
| SmaI | CCCGGG | 1 cut(s) | 1689 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 314, 1589, 1938, 2241 |
| SmlI | CTYRAG | 2 cut(s) | 230, 299 |
| SmoI | CTYRAG | 2 cut(s) | 230, 299 |
| SphI | GCATGC | 1 cut(s) | 1362 |
| SsiI | CCGC | 5 cut(s) | 360, 823, 1064, 1905, 1982 |
| SspI | AATATT | 1 cut(s) | 342 |
| SspMI | CTAG | 5 cut(s) | 6, 1094, 1788, 1979, 2148 |
| StyD4I | CCNGG | 7 cut(s) | 1213, 1525, 1686, 1687, 1744, 2067, 2216 |
| StyI | CCWWGG | 3 cut(s) | 474, 750, 1787 |
| TaaI | ACNGT | 8 cut(s) | 149, 247, 1060, 1070, 1227, 1242, 1876, 2040 |
| TaiI | ACGT | 5 cut(s) | 62, 394, 404, 906, 2032 |
| TauI | GCSGC | 2 cut(s) | 363, 1066 |
| TfiI | GAWTC | 7 cut(s) | 136, 183, 463, 670, 946, 1175, 1291 |
| TscAI | CASTG | 3 cut(s) | 152, 1075, 1230 |
| TseFI | GTSAC | 5 cut(s) | 478, 1129, 1634, 1870, 2005 |
| TseI | GCWGC | 3 cut(s) | 219, 1084, 2180 |
| Tsp45I | GTSAC | 5 cut(s) | 478, 1129, 1634, 1870, 2005 |
| TspGWI | ACGGA | 2 cut(s) | 1092, 1330 |
| TspMI | CCCGGG | 1 cut(s) | 1687 |
| TspRI | CASTG | 3 cut(s) | 152, 1075, 1230 |
| VpaK11BI | GGWCC | 1 cut(s) | 2062 |
| VspI | ATTAAT | 2 cut(s) | 800, 1884 |
| XapI | RAATTY | 7 cut(s) | 67, 154, 304, 1370, 1770, 1782, 1792 |
| XbaI | TCTAGA | 1 cut(s) | 1093 |
| XceI | RCATGY | 4 cut(s) | 562, 700, 1362, 1962 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1853 |
| XmaI | CCCGGG | 1 cut(s) | 1687 |
| XmaJI | CCTAGG | 1 cut(s) | 1787 |
| XmiI | GTMKAC | 1 cut(s) | 2226 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1179 |
| XspI | CTAG | 5 cut(s) | 6, 1094, 1788, 1979, 2148 |
| ZraI | GACGTC | 1 cut(s) | 60 |
| Zsp2I | ATGCAT | 1 cut(s) | 1364 |