TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 115 - 277 | 6e-54 | TIR domain |
| TIR_2 | PF13676 | 117 - 235 | 1.5e-14 | TIR domain |
| NB-ARC | PF00931 | 301 - 461 | 4.3e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 532 - 600 | 4.4e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 801 - 967 | 8.4e-23 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 817 - 878 | 7.3e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 659 |
| AccBSI | CCGCTC | 1 cut(s) | 2409 |
| AccI | GTMKAC | 2 cut(s) | 404, 889 |
| AccIII | TCCGGA | 1 cut(s) | 2890 |
| AciI | CCGC | 2 cut(s) | 2134, 2407 |
| AclI | AACGTT | 2 cut(s) | 1285, 1554 |
| AclWI | GGATC | 6 cut(s) | 237, 626, 639, 1526, 2268, 2478 |
| AcoI | YGGCCR | 1 cut(s) | 1435 |
| AcsI | RAATTY | 8 cut(s) | 791, 1260, 2167, 2191, 2426, 2596, 2834, 2886 |
| AcuI | CTGAAG | 1 cut(s) | 421 |
| AdeI | CACNNNGTG | 3 cut(s) | 1421, 1648, 1805 |
| AfaI | GTAC | 6 cut(s) | 146, 645, 782, 1319, 1428, 1641 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 549, 2700 |
| AflIII | ACRYGT | 2 cut(s) | 1194, 2183 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 896 |
| AjiI | CACGTC | 1 cut(s) | 1195 |
| AjnI | CCWGG | 5 cut(s) | 955, 1393, 1437, 1810, 2925 |
| Alw21I | GWGCWC | 1 cut(s) | 483 |
| Alw26I | GTCTC | 5 cut(s) | 425, 1092, 1203, 2010, 2869 |
| AlwI | GGATC | 6 cut(s) | 237, 626, 639, 1526, 2268, 2478 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 113, 1691 |
| Ama87I | CYCGRG | 2 cut(s) | 131, 825 |
| Aor13HI | TCCGGA | 1 cut(s) | 2890 |
| AoxI | GGCC | 6 cut(s) | 31, 761, 1247, 1435, 1441, 2057 |
| ApeKI | GCWGC | 8 cut(s) | 113, 281, 539, 728, 743, 860, 1821, 2577 |
| ApoI | RAATTY | 8 cut(s) | 791, 1260, 2167, 2191, 2426, 2596, 2834, 2886 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1830, 1862 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1373, 2203 |
| AspLEI | GCGC | 1 cut(s) | 129 |
| AspS9I | GGNCC | 5 cut(s) | 31, 953, 1247, 1388, 1441 |
| AsuC2I | CCSGG | 1 cut(s) | 1251 |
| AsuHPI | GGTGA | 6 cut(s) | 35, 317, 680, 1126, 1409, 1791 |
| AvaI | CYCGRG | 2 cut(s) | 131, 825 |
| AvaII | GGWCC | 2 cut(s) | 953, 1388 |
| BalI | TGGCCA | 1 cut(s) | 1437 |
| BamHI | GGATCC | 1 cut(s) | 631 |
| BanI | GGYRCC | 1 cut(s) | 659 |
| BanII | GRGCYC | 2 cut(s) | 483, 2529 |
| BbsI | GAAGAC | 5 cut(s) | 68, 288, 471, 514, 2807 |
| Bbv12I | GWGCWC | 1 cut(s) | 483 |
| BbvI | GCAGC | 8 cut(s) | 100, 293, 526, 740, 755, 847, 1833, 2589 |
| BccI | CCATC | 7 cut(s) | 753, 767, 1237, 1727, 2092, 2443, 2666 |
| BciT130I | CCWGG | 5 cut(s) | 957, 1395, 1439, 1812, 2927 |
| BciVI | GTATCC | 1 cut(s) | 367 |
| BclI | TGATCA | 4 cut(s) | 322, 688, 1116, 1129 |
| BcnI | CCSGG | 1 cut(s) | 1251 |
| BcoDI | GTCTC | 5 cut(s) | 425, 1092, 1203, 2010, 2869 |
| BfaI | CTAG | 8 cut(s) | 176, 206, 1058, 1187, 1206, 1661, 1803, 2915 |
| BfuI | GTATCC | 1 cut(s) | 367 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 30 |
| BglII | AGATCT | 1 cut(s) | 1899 |
| BisI | GCNGC | 9 cut(s) | 114, 282, 540, 729, 744, 861, 1822, 2134, 2578 |
| BlpI | GCTNAGC | 1 cut(s) | 452 |
| BlsI | GCNGC | 9 cut(s) | 115, 283, 541, 730, 745, 862, 1823, 2135, 2579 |
| Bme1390I | CCNGG | 6 cut(s) | 957, 1251, 1395, 1439, 1812, 2927 |
| Bme18I | GGWCC | 2 cut(s) | 953, 1388 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 896 |
| BmeT110I | CYCGRG | 2 cut(s) | 131, 825 |
| BmgBI | CACGTC | 1 cut(s) | 1195 |
| BmgT120I | GGNCC | 5 cut(s) | 31, 953, 1247, 1388, 1441 |
| BmiI | GGNNCC | 4 cut(s) | 633, 661, 954, 2455 |
| BmrFI | CCNGG | 6 cut(s) | 957, 1251, 1395, 1439, 1812, 2927 |
| BmsI | GCATC | 6 cut(s) | 1149, 1320, 1564, 1740, 1902, 2711 |
| BpiI | GAAGAC | 5 cut(s) | 68, 288, 471, 514, 2807 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2921, 2953 |
| BpmI | CTGGAG | 3 cut(s) | 1377, 2034, 2948 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 452 |
| BpuEI | CTTGAG | 5 cut(s) | 529, 719, 2251, 2441, 2479 |
| BpuMI | CCSGG | 1 cut(s) | 1251 |
| BsaI | GGTCTC | 1 cut(s) | 425 |
| BsaJI | CCNNGG | 4 cut(s) | 130, 918, 1438, 1811 |
| BsaWI | WCCGGW | 1 cut(s) | 2890 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 465, 495 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 549, 2700 |
| Bse1I | ACTGG | 4 cut(s) | 285, 570, 1696, 2038 |
| BseAI | TCCGGA | 1 cut(s) | 2890 |
| BseBI | CCWGG | 5 cut(s) | 957, 1395, 1439, 1812, 2927 |
| BseDI | CCNNGG | 4 cut(s) | 130, 918, 1438, 1811 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 549, 2700 |
| BseMII | CTCAG | 4 cut(s) | 347, 651, 1965, 2131 |
| BseNI | ACTGG | 4 cut(s) | 285, 570, 1696, 2038 |
| BseRI | GAGGAG | 3 cut(s) | 473, 474, 1511 |
| BseXI | GCAGC | 8 cut(s) | 100, 293, 526, 740, 755, 847, 1833, 2589 |
| BseYI | CCCAGC | 1 cut(s) | 2766 |
| BsgI | GTGCAG | 2 cut(s) | 1443, 2596 |
| Bsh1285I | CGRYCG | 1 cut(s) | 29 |
| BshFI | GGCC | 6 cut(s) | 33, 763, 1249, 1437, 1443, 2059 |
| BshNI | GGYRCC | 1 cut(s) | 659 |
| BsiEI | CGRYCG | 1 cut(s) | 29 |
| BsiHKAI | GWGCWC | 1 cut(s) | 483 |
| BsiHKCI | CYCGRG | 2 cut(s) | 131, 825 |
| BsiSI | CCGG | 2 cut(s) | 1250, 2891 |
| BslFI | GGGAC | 2 cut(s) | 966, 1087 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 549, 2700 |
| BsmAI | GTCTC | 5 cut(s) | 425, 1092, 1203, 2010, 2869 |
| BsmFI | GGGAC | 2 cut(s) | 966, 1087 |
| BsmI | GAATGC | 5 cut(s) | 587, 1373, 1375, 1942, 2009 |
| BsnI | GGCC | 6 cut(s) | 33, 763, 1249, 1437, 1443, 2059 |
| Bso31I | GGTCTC | 1 cut(s) | 425 |
| BsoBI | CYCGRG | 2 cut(s) | 131, 825 |
| Bsp1286I | GDGCHC | 2 cut(s) | 483, 2529 |
| Bsp13I | TCCGGA | 1 cut(s) | 2890 |
| Bsp1407I | TGTACA | 1 cut(s) | 1639 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 452 |
| BspACI | CCGC | 2 cut(s) | 2134, 2407 |
| BspANI | GGCC | 6 cut(s) | 33, 763, 1249, 1437, 1443, 2059 |
| BspCNI | CTCAG | 4 cut(s) | 348, 650, 1964, 2130 |
| BspEI | TCCGGA | 1 cut(s) | 2890 |
| BspHI | TCATGA | 1 cut(s) | 2751 |
| BspLI | GGNNCC | 4 cut(s) | 633, 661, 954, 2455 |
| BspPI | GGATC | 6 cut(s) | 237, 626, 639, 1526, 2268, 2478 |
| BspQI | GCTCTTC | 1 cut(s) | 1913 |
| BspT107I | GGYRCC | 1 cut(s) | 659 |
| BspTNI | GGTCTC | 1 cut(s) | 425 |
| BsrBI | CCGCTC | 1 cut(s) | 2409 |
| BsrGI | TGTACA | 1 cut(s) | 1639 |
| BsrI | ACTGG | 4 cut(s) | 285, 570, 1696, 2038 |
| BssECI | CCNNGG | 4 cut(s) | 130, 918, 1438, 1811 |
| BssNAI | GTATAC | 1 cut(s) | 405 |
| BssT1I | CCWWGG | 1 cut(s) | 918 |
| Bst1107I | GTATAC | 1 cut(s) | 405 |
| Bst2UI | CCWGG | 5 cut(s) | 957, 1395, 1439, 1812, 2927 |
| Bst4CI | ACNGT | 4 cut(s) | 149, 1646, 1797, 2574 |
| Bst6I | CTCTTC | 2 cut(s) | 1913, 2961 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 113, 1421 |
| BstAUI | TGTACA | 1 cut(s) | 1639 |
| BstC8I | GCNNGC | 6 cut(s) | 169, 251, 741, 1669, 2417, 2824 |
| BstHHI | GCGC | 1 cut(s) | 129 |
| BstMAI | GTCTC | 5 cut(s) | 425, 1092, 1203, 2010, 2869 |
| BstMCI | CGRYCG | 1 cut(s) | 29 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 30, 113, 164, 366, 942, 1421, 1912, 2056 |
| BstNI | CCWGG | 5 cut(s) | 957, 1395, 1439, 1812, 2927 |
| BstNSI | RCATGY | 2 cut(s) | 1023, 2187 |
| BstSCI | CCNGG | 6 cut(s) | 955, 1249, 1393, 1437, 1810, 2925 |
| BstV1I | GCAGC | 8 cut(s) | 100, 293, 526, 740, 755, 847, 1833, 2589 |
| BstV2I | GAAGAC | 5 cut(s) | 68, 288, 471, 514, 2807 |
| BstX2I | RGATCY | 6 cut(s) | 242, 631, 1531, 1899, 2260, 2470 |
| BstYI | RGATCY | 6 cut(s) | 242, 631, 1531, 1899, 2260, 2470 |
| BstZ17I | GTATAC | 1 cut(s) | 405 |
| BsuI | GTATCC | 1 cut(s) | 367 |
| BsuRI | GGCC | 6 cut(s) | 33, 763, 1249, 1437, 1443, 2059 |
| BtrI | CACGTC | 1 cut(s) | 1195 |
| BtsI | GCAGTG | 1 cut(s) | 1129 |
| BtsIMutI | CAGTG | 2 cut(s) | 1129, 1692 |
| Cac8I | GCNNGC | 6 cut(s) | 169, 251, 741, 1669, 2417, 2824 |
| CaiI | CAGNNNCTG | 2 cut(s) | 113, 1691 |
| CciI | TCATGA | 1 cut(s) | 2751 |
| CfoI | GCGC | 1 cut(s) | 129 |
| Cfr13I | GGNCC | 5 cut(s) | 31, 953, 1247, 1388, 1441 |
| CsiI | ACCWGGT | 1 cut(s) | 955 |
| Csp6I | GTAC | 6 cut(s) | 145, 644, 781, 1318, 1427, 1640 |
| CviAII | CATG | 7 cut(s) | 843, 937, 1020, 1754, 2096, 2184, 2752 |
| CviQI | GTAC | 6 cut(s) | 145, 644, 781, 1318, 1427, 1640 |
| DraI | TTTAAA | 3 cut(s) | 1593, 1627, 2601 |
| DraIII | CACNNNGTG | 3 cut(s) | 1421, 1648, 1805 |
| DriI | GACNNNNNGTC | 1 cut(s) | 896 |
| EaeI | YGGCCR | 1 cut(s) | 1435 |
| Eam1104I | CTCTTC | 2 cut(s) | 1913, 2961 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 896 |
| EarI | CTCTTC | 2 cut(s) | 1913, 2961 |
| Ecl136II | GAGCTC | 1 cut(s) | 481 |
| Eco130I | CCWWGG | 1 cut(s) | 918 |
| Eco24I | GRGCYC | 2 cut(s) | 483, 2529 |
| Eco31I | GGTCTC | 1 cut(s) | 425 |
| Eco32I | GATATC | 2 cut(s) | 1612, 1929 |
| Eco47I | GGWCC | 2 cut(s) | 953, 1388 |
| Eco53kI | GAGCTC | 1 cut(s) | 481 |
| Eco57I | CTGAAG | 1 cut(s) | 421 |
| Eco88I | CYCGRG | 2 cut(s) | 131, 825 |
| EcoICRI | GAGCTC | 1 cut(s) | 481 |
| EcoO109I | RGGNCCY | 2 cut(s) | 953, 1441 |
| EcoRI | GAATTC | 1 cut(s) | 1260 |
| EcoRII | CCWGG | 5 cut(s) | 955, 1393, 1437, 1810, 2925 |
| EcoRV | GATATC | 2 cut(s) | 1612, 1929 |
| EcoT14I | CCWWGG | 1 cut(s) | 918 |
| EcoT22I | ATGCAT | 2 cut(s) | 1375, 1755 |
| EcoT38I | GRGCYC | 2 cut(s) | 483, 2529 |
| ErhI | CCWWGG | 1 cut(s) | 918 |
| FaeI | CATG | 7 cut(s) | 846, 940, 1023, 1757, 2099, 2187, 2755 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1062, 1094 |
| FaqI | GGGAC | 2 cut(s) | 966, 1087 |
| FatI | CATG | 7 cut(s) | 842, 936, 1019, 1753, 2095, 2183, 2751 |
| FauNDI | CATATG | 1 cut(s) | 947 |
| FbaI | TGATCA | 4 cut(s) | 322, 688, 1116, 1129 |
| FblI | GTMKAC | 2 cut(s) | 404, 889 |
| Fnu4HI | GCNGC | 9 cut(s) | 114, 282, 540, 729, 744, 861, 1822, 2134, 2578 |
| FriOI | GRGCYC | 2 cut(s) | 483, 2529 |
| Fsp4HI | GCNGC | 9 cut(s) | 114, 282, 540, 729, 744, 861, 1822, 2134, 2578 |
| FspBI | CTAG | 8 cut(s) | 176, 206, 1058, 1187, 1206, 1661, 1803, 2915 |
| GlaI | GCGC | 1 cut(s) | 128 |
| GluI | GCNGC | 9 cut(s) | 114, 282, 540, 729, 744, 861, 1822, 2134, 2578 |
| GsaI | CCCAGC | 1 cut(s) | 2770 |
| GsuI | CTGGAG | 3 cut(s) | 1377, 2034, 2948 |
| HaeIII | GGCC | 6 cut(s) | 33, 763, 1249, 1437, 1443, 2059 |
| HapII | CCGG | 2 cut(s) | 1250, 2891 |
| HhaI | GCGC | 1 cut(s) | 129 |
| Hin1II | CATG | 7 cut(s) | 846, 940, 1023, 1757, 2099, 2187, 2755 |
| Hin6I | GCGC | 1 cut(s) | 127 |
| HinP1I | GCGC | 1 cut(s) | 127 |
| HincII | GTYRAC | 3 cut(s) | 901, 1849, 2338 |
| HindII | GTYRAC | 3 cut(s) | 901, 1849, 2338 |
| HindIII | AAGCTT | 6 cut(s) | 449, 1347, 1665, 1716, 1945, 2417 |
| HpaII | CCGG | 2 cut(s) | 1250, 2891 |
| HphI | GGTGA | 6 cut(s) | 35, 317, 680, 1126, 1409, 1791 |
| HpyCH4III | ACNGT | 4 cut(s) | 149, 1646, 1797, 2574 |
| HpyCH4IV | ACGT | 7 cut(s) | 310, 1194, 1285, 1420, 1554, 2907, 2919 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 30, 113, 164, 366, 942, 1421, 1912, 2056 |
| HpySE526I | ACGT | 7 cut(s) | 310, 1194, 1285, 1420, 1554, 2907, 2919 |
| Hsp92II | CATG | 7 cut(s) | 846, 940, 1023, 1757, 2099, 2187, 2755 |
| HspAI | GCGC | 1 cut(s) | 127 |
| Kpn2I | TCCGGA | 1 cut(s) | 2890 |
| Ksp22I | TGATCA | 4 cut(s) | 322, 688, 1116, 1129 |
| LguI | GCTCTTC | 1 cut(s) | 1913 |
| LmnI | GCTCC | 3 cut(s) | 486, 1833, 2893 |
| Lsp1109I | GCAGC | 8 cut(s) | 100, 293, 526, 740, 755, 847, 1833, 2589 |
| LweI | GCATC | 6 cut(s) | 1149, 1320, 1564, 1740, 1902, 2711 |
| MabI | ACCWGGT | 1 cut(s) | 955 |
| MaeI | CTAG | 8 cut(s) | 176, 206, 1058, 1187, 1206, 1661, 1803, 2915 |
| MaeII | ACGT | 7 cut(s) | 310, 1194, 1285, 1420, 1554, 2907, 2919 |
| MaeIII | GTNAC | 3 cut(s) | 1687, 1797, 2323 |
| MbiI | CCGCTC | 1 cut(s) | 2409 |
| MfeI | CAATTG | 4 cut(s) | 220, 492, 978, 2508 |
| MflI | RGATCY | 6 cut(s) | 242, 631, 1531, 1899, 2260, 2470 |
| MhlI | GDGCHC | 2 cut(s) | 483, 2529 |
| MlsI | TGGCCA | 1 cut(s) | 1437 |
| MluNI | TGGCCA | 1 cut(s) | 1437 |
| MlyI | GAGTC | 9 cut(s) | 82, 509, 794, 890, 1094, 1146, 2513, 2749, 2871 |
| MmeI | TCCRAC | 5 cut(s) | 1087, 2058, 2238, 2669, 2688 |
| Mox20I | TGGCCA | 1 cut(s) | 1437 |
| Mph1103I | ATGCAT | 2 cut(s) | 1375, 1755 |
| MroI | TCCGGA | 1 cut(s) | 2890 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1373, 2203 |
| MscI | TGGCCA | 1 cut(s) | 1437 |
| MslI | CAYNNNNRTG | 2 cut(s) | 809, 2149 |
| Msp20I | TGGCCA | 1 cut(s) | 1437 |
| MspI | CCGG | 2 cut(s) | 1250, 2891 |
| MspR9I | CCNGG | 6 cut(s) | 957, 1251, 1395, 1439, 1812, 2927 |
| MunI | CAATTG | 4 cut(s) | 220, 492, 978, 2508 |
| Mva1269I | GAATGC | 5 cut(s) | 587, 1373, 1375, 1942, 2009 |
| MvaI | CCWGG | 5 cut(s) | 957, 1395, 1439, 1812, 2927 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 30, 113, 164, 366, 942, 1421, 1912, 2056 |
| NciI | CCSGG | 1 cut(s) | 1251 |
| NdeI | CATATG | 1 cut(s) | 947 |
| NlaIII | CATG | 7 cut(s) | 846, 940, 1023, 1757, 2099, 2187, 2755 |
| NlaIV | GGNNCC | 4 cut(s) | 633, 661, 954, 2455 |
| NmuCI | GTSAC | 2 cut(s) | 1687, 1797 |
| NsiI | ATGCAT | 2 cut(s) | 1375, 1755 |
| NspI | RCATGY | 2 cut(s) | 1023, 2187 |
| PagI | TCATGA | 1 cut(s) | 2751 |
| PciI | ACATGT | 1 cut(s) | 2183 |
| PciSI | GCTCTTC | 1 cut(s) | 1913 |
| PctI | GAATGC | 5 cut(s) | 587, 1373, 1375, 1942, 2009 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1373, 2203 |
| PfeI | GAWTC | 5 cut(s) | 1963, 2139, 2297, 2307, 2934 |
| PfoI | TCCNGGA | 1 cut(s) | 2925 |
| PkrI | GCNGC | 9 cut(s) | 115, 283, 541, 730, 745, 862, 1823, 2135, 2579 |
| Ple19I | CGATCG | 1 cut(s) | 29 |
| PleI | GAGTC | 9 cut(s) | 81, 508, 793, 889, 1094, 1145, 2512, 2749, 2871 |
| PpsI | GAGTC | 9 cut(s) | 81, 508, 793, 889, 1094, 1145, 2512, 2749, 2871 |
| PpuMI | RGGWCCY | 1 cut(s) | 953 |
| PscI | ACATGT | 1 cut(s) | 2183 |
| Psp124BI | GAGCTC | 1 cut(s) | 483 |
| Psp1406I | AACGTT | 2 cut(s) | 1285, 1554 |
| Psp5II | RGGWCCY | 1 cut(s) | 953 |
| Psp6I | CCWGG | 5 cut(s) | 955, 1393, 1437, 1810, 2925 |
| PspFI | CCCAGC | 1 cut(s) | 2766 |
| PspGI | CCWGG | 5 cut(s) | 955, 1393, 1437, 1810, 2925 |
| PspN4I | GGNNCC | 4 cut(s) | 633, 661, 954, 2455 |
| PspPI | GGNCC | 5 cut(s) | 31, 953, 1247, 1388, 1441 |
| PspPPI | RGGWCCY | 1 cut(s) | 953 |
| PstNI | CAGNNNCTG | 2 cut(s) | 113, 1691 |
| PsuI | RGATCY | 6 cut(s) | 242, 631, 1531, 1899, 2260, 2470 |
| PvuI | CGATCG | 1 cut(s) | 29 |
| RsaI | GTAC | 6 cut(s) | 146, 645, 782, 1319, 1428, 1641 |
| RsaNI | GTAC | 6 cut(s) | 145, 644, 781, 1318, 1427, 1640 |
| RseI | CAYNNNNRTG | 2 cut(s) | 809, 2149 |
| SacI | GAGCTC | 1 cut(s) | 483 |
| SapI | GCTCTTC | 1 cut(s) | 1913 |
| SatI | GCNGC | 9 cut(s) | 114, 282, 540, 729, 744, 861, 1822, 2134, 2578 |
| Sau96I | GGNCC | 5 cut(s) | 31, 953, 1247, 1388, 1441 |
| SchI | GAGTC | 9 cut(s) | 82, 509, 794, 890, 1094, 1146, 2513, 2749, 2871 |
| ScrFI | CCNGG | 6 cut(s) | 957, 1251, 1395, 1439, 1812, 2927 |
| SduI | GDGCHC | 2 cut(s) | 483, 2529 |
| SexAI | ACCWGGT | 1 cut(s) | 955 |
| SfaNI | GCATC | 6 cut(s) | 1149, 1320, 1564, 1740, 1902, 2711 |
| SinI | GGWCC | 2 cut(s) | 953, 1388 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 809, 2149 |
| SmlI | CTYRAG | 5 cut(s) | 544, 734, 2230, 2420, 2458 |
| SmoI | CTYRAG | 5 cut(s) | 544, 734, 2230, 2420, 2458 |
| SsiI | CCGC | 2 cut(s) | 2134, 2407 |
| SspI | AATATT | 1 cut(s) | 928 |
| SspMI | CTAG | 8 cut(s) | 176, 206, 1058, 1187, 1206, 1661, 1803, 2915 |
| SstI | GAGCTC | 1 cut(s) | 483 |
| StyD4I | CCNGG | 6 cut(s) | 955, 1249, 1393, 1437, 1810, 2925 |
| StyI | CCWWGG | 1 cut(s) | 918 |
| TaaI | ACNGT | 4 cut(s) | 149, 1646, 1797, 2574 |
| TaiI | ACGT | 7 cut(s) | 313, 1197, 1288, 1423, 1557, 2910, 2922 |
| TaqI | TCGA | 6 cut(s) | 364, 503, 2305, 2627, 2670, 2939 |
| TatI | WGTACW | 3 cut(s) | 144, 1426, 1639 |
| TauI | GCSGC | 1 cut(s) | 2136 |
| TfiI | GAWTC | 5 cut(s) | 1963, 2139, 2297, 2307, 2934 |
| TscAI | CASTG | 2 cut(s) | 1129, 1692 |
| TseFI | GTSAC | 2 cut(s) | 1687, 1797 |
| TseI | GCWGC | 8 cut(s) | 113, 281, 539, 728, 743, 860, 1821, 2577 |
| Tsp45I | GTSAC | 2 cut(s) | 1687, 1797 |
| TspGWI | ACGGA | 2 cut(s) | 2058, 2716 |
| TspRI | CASTG | 2 cut(s) | 1129, 1692 |
| VpaK11BI | GGWCC | 2 cut(s) | 953, 1388 |
| XapI | RAATTY | 8 cut(s) | 791, 1260, 2167, 2191, 2426, 2596, 2834, 2886 |
| XbaI | TCTAGA | 1 cut(s) | 205 |
| XceI | RCATGY | 2 cut(s) | 1023, 2187 |
| XmiI | GTMKAC | 2 cut(s) | 404, 889 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1373, 2203 |
| XspI | CTAG | 8 cut(s) | 176, 206, 1058, 1187, 1206, 1661, 1803, 2915 |
| Zsp2I | ATGCAT | 2 cut(s) | 1375, 1755 |