TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 14 - 151 | 7.4e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 207 |
| AccI | GTMKAC | 1 cut(s) | 243 |
| AcsI | RAATTY | 2 cut(s) | 130, 145 |
| AcvI | CACGTG | 1 cut(s) | 226 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AflIII | ACRYGT | 2 cut(s) | 223, 225 |
| AgsI | TTSAA | 2 cut(s) | 70, 176 |
| AhlI | ACTAGT | 1 cut(s) | 445 |
| AjnI | CCWGG | 1 cut(s) | 43 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 137, 169 |
| AluBI | AGCT | 1 cut(s) | 431 |
| AluI | AGCT | 1 cut(s) | 431 |
| Alw21I | GWGCWC | 1 cut(s) | 282 |
| Alw26I | GTCTC | 1 cut(s) | 349 |
| ApeKI | GCWGC | 1 cut(s) | 316 |
| ApoI | RAATTY | 2 cut(s) | 130, 145 |
| AseI | ATTAAT | 1 cut(s) | 249 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 145 |
| AsuC2I | CCSGG | 2 cut(s) | 6, 297 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 34 |
| BbrPI | CACGTG | 1 cut(s) | 226 |
| Bbv12I | GWGCWC | 1 cut(s) | 282 |
| BbvI | GCAGC | 1 cut(s) | 303 |
| BccI | CCATC | 1 cut(s) | 179 |
| BciT130I | CCWGG | 1 cut(s) | 45 |
| BclI | TGATCA | 1 cut(s) | 91 |
| BcnI | CCSGG | 2 cut(s) | 6, 297 |
| BcoDI | GTCTC | 1 cut(s) | 349 |
| BcuI | ACTAGT | 1 cut(s) | 445 |
| BfaI | CTAG | 1 cut(s) | 446 |
| BfmI | CTRYAG | 1 cut(s) | 317 |
| BisI | GCNGC | 1 cut(s) | 317 |
| BlsI | GCNGC | 1 cut(s) | 318 |
| Bme1390I | CCNGG | 3 cut(s) | 6, 45, 297 |
| BmrFI | CCNGG | 3 cut(s) | 6, 45, 297 |
| BpuMI | CCSGG | 2 cut(s) | 6, 297 |
| BsaAI | YACGTR | 1 cut(s) | 226 |
| BsaJI | CCNNGG | 2 cut(s) | 5, 296 |
| BsaWI | WCCGGW | 1 cut(s) | 456 |
| BseBI | CCWGG | 1 cut(s) | 45 |
| BseDI | CCNNGG | 2 cut(s) | 5, 296 |
| BseXI | GCAGC | 1 cut(s) | 303 |
| BsiHKAI | GWGCWC | 1 cut(s) | 282 |
| BsiSI | CCGG | 3 cut(s) | 5, 296, 457 |
| BsmAI | GTCTC | 1 cut(s) | 349 |
| Bsp1286I | GDGCHC | 1 cut(s) | 282 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspHI | TCATGA | 2 cut(s) | 94, 274 |
| BspMAI | CTGCAG | 1 cut(s) | 321 |
| BspQI | GCTCTTC | 1 cut(s) | 363 |
| BssECI | CCNNGG | 2 cut(s) | 5, 296 |
| BssMI | GATC | 1 cut(s) | 91 |
| Bst2UI | CCWGG | 1 cut(s) | 45 |
| Bst4CI | ACNGT | 1 cut(s) | 360 |
| Bst6I | CTCTTC | 1 cut(s) | 363 |
| BstBAI | YACGTR | 1 cut(s) | 226 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMAI | GTCTC | 1 cut(s) | 349 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 164 |
| BstNI | CCWGG | 1 cut(s) | 45 |
| BstSCI | CCNGG | 3 cut(s) | 4, 43, 295 |
| BstSFI | CTRYAG | 1 cut(s) | 317 |
| BstV1I | GCAGC | 1 cut(s) | 303 |
| BtsIMutI | CAGTG | 2 cut(s) | 142, 365 |
| CciI | TCATGA | 2 cut(s) | 94, 274 |
| CseI | GACGC | 1 cut(s) | 71 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 4 cut(s) | 95, 233, 275, 308 |
| CviJI | RGCY | 4 cut(s) | 158, 167, 316, 431 |
| CviKI_1 | RGCY | 4 cut(s) | 158, 167, 316, 431 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| Eam1104I | CTCTTC | 1 cut(s) | 363 |
| EarI | CTCTTC | 1 cut(s) | 363 |
| Eco72I | CACGTG | 1 cut(s) | 226 |
| EcoRI | GAATTC | 1 cut(s) | 145 |
| EcoRII | CCWGG | 1 cut(s) | 43 |
| FaeI | CATG | 4 cut(s) | 98, 236, 278, 311 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 360, 392 |
| FatI | CATG | 4 cut(s) | 94, 232, 274, 307 |
| FbaI | TGATCA | 1 cut(s) | 91 |
| FblI | GTMKAC | 1 cut(s) | 243 |
| Fnu4HI | GCNGC | 1 cut(s) | 317 |
| Fsp4HI | GCNGC | 1 cut(s) | 317 |
| FspBI | CTAG | 1 cut(s) | 446 |
| GluI | GCNGC | 1 cut(s) | 317 |
| HapII | CCGG | 3 cut(s) | 5, 296, 457 |
| HgaI | GACGC | 1 cut(s) | 71 |
| Hin1II | CATG | 4 cut(s) | 98, 236, 278, 311 |
| HindIII | AAGCTT | 1 cut(s) | 429 |
| HinfI | GANTC | 4 cut(s) | 14, 240, 343, 404 |
| HpaII | CCGG | 3 cut(s) | 5, 296, 457 |
| Hpy166II | GTNNAC | 1 cut(s) | 244 |
| Hpy188I | TCNGA | 2 cut(s) | 239, 337 |
| Hpy188III | TCNNGA | 3 cut(s) | 95, 150, 275 |
| Hpy8I | GTNNAC | 1 cut(s) | 244 |
| HpyAV | CCTTC | 1 cut(s) | 4 |
| HpyCH4III | ACNGT | 1 cut(s) | 360 |
| HpyCH4IV | ACGT | 1 cut(s) | 225 |
| HpyCH4V | TGCA | 2 cut(s) | 218, 319 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 164 |
| HpySE526I | ACGT | 1 cut(s) | 225 |
| Hsp92II | CATG | 4 cut(s) | 98, 236, 278, 311 |
| Ksp22I | TGATCA | 1 cut(s) | 91 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| LguI | GCTCTTC | 1 cut(s) | 363 |
| LpnPI | CCDG | 5 cut(s) | 18, 30, 57, 309, 470 |
| Lsp1109I | GCAGC | 1 cut(s) | 303 |
| MaeI | CTAG | 1 cut(s) | 446 |
| MaeII | ACGT | 1 cut(s) | 225 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MboII | GAAGA | 2 cut(s) | 380, 399 |
| MhlI | GDGCHC | 1 cut(s) | 282 |
| MluCI | AATT | 2 cut(s) | 130, 145 |
| MlyI | GAGTC | 2 cut(s) | 249, 352 |
| MmeI | TCCRAC | 2 cut(s) | 110, 466 |
| MnlI | CCTC | 1 cut(s) | 135 |
| MroXI | GAANNNNTTC | 1 cut(s) | 145 |
| MseI | TTAA | 3 cut(s) | 117, 249, 425 |
| MspI | CCGG | 3 cut(s) | 5, 296, 457 |
| MspR9I | CCNGG | 3 cut(s) | 6, 45, 297 |
| MvaI | CCWGG | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 164 |
| NciI | CCSGG | 2 cut(s) | 6, 297 |
| NdeII | GATC | 1 cut(s) | 91 |
| NlaIII | CATG | 4 cut(s) | 98, 236, 278, 311 |
| PagI | TCATGA | 2 cut(s) | 94, 274 |
| PciSI | GCTCTTC | 1 cut(s) | 363 |
| PdmI | GAANNNNTTC | 1 cut(s) | 145 |
| PfeI | GAWTC | 2 cut(s) | 14, 404 |
| PfoI | TCCNGGA | 1 cut(s) | 43 |
| PkrI | GCNGC | 1 cut(s) | 318 |
| PleI | GAGTC | 2 cut(s) | 248, 351 |
| PmaCI | CACGTG | 1 cut(s) | 226 |
| PmlI | CACGTG | 1 cut(s) | 226 |
| PpsI | GAGTC | 2 cut(s) | 248, 351 |
| Ppu21I | YACGTR | 1 cut(s) | 226 |
| PshBI | ATTAAT | 1 cut(s) | 249 |
| PsiI | TTATAA | 1 cut(s) | 207 |
| Psp6I | CCWGG | 1 cut(s) | 43 |
| PspCI | CACGTG | 1 cut(s) | 226 |
| PspGI | CCWGG | 1 cut(s) | 43 |
| PstI | CTGCAG | 1 cut(s) | 321 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| SapI | GCTCTTC | 1 cut(s) | 363 |
| SaqAI | TTAA | 3 cut(s) | 117, 249, 425 |
| SatI | GCNGC | 1 cut(s) | 317 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| SchI | GAGTC | 2 cut(s) | 249, 352 |
| ScrFI | CCNGG | 3 cut(s) | 6, 45, 297 |
| SduI | GDGCHC | 1 cut(s) | 282 |
| SetI | ASST | 3 cut(s) | 200, 228, 433 |
| SfcI | CTRYAG | 1 cut(s) | 317 |
| SpeI | ACTAGT | 1 cut(s) | 445 |
| Sse9I | AATT | 2 cut(s) | 130, 145 |
| SspI | AATATT | 2 cut(s) | 55, 264 |
| SspMI | CTAG | 1 cut(s) | 446 |
| StyD4I | CCNGG | 3 cut(s) | 4, 43, 295 |
| TaaI | ACNGT | 1 cut(s) | 360 |
| TaiI | ACGT | 1 cut(s) | 228 |
| TaqI | TCGA | 2 cut(s) | 24, 149 |
| TasI | AATT | 2 cut(s) | 130, 145 |
| TatI | WGTACW | 1 cut(s) | 37 |
| TfiI | GAWTC | 2 cut(s) | 14, 404 |
| Tru1I | TTAA | 3 cut(s) | 117, 249, 425 |
| Tru9I | TTAA | 3 cut(s) | 117, 249, 425 |
| TscAI | CASTG | 2 cut(s) | 142, 365 |
| TseI | GCWGC | 1 cut(s) | 316 |
| TspDTI | ATGAA | 5 cut(s) | 6, 221, 263, 273, 381 |
| TspRI | CASTG | 2 cut(s) | 142, 365 |
| VspI | ATTAAT | 1 cut(s) | 249 |
| XapI | RAATTY | 2 cut(s) | 130, 145 |
| XmiI | GTMKAC | 1 cut(s) | 243 |
| XmnI | GAANNNNTTC | 1 cut(s) | 145 |
| XspI | CTAG | 1 cut(s) | 446 |