TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GRAS | PF03514 | 328 - 698 | 8.7e-122 | GRAS domain family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1462 |
| AccB1I | GGYRCC | 1 cut(s) | 1139 |
| AccII | CGCG | 2 cut(s) | 1127, 1129 |
| AccIII | TCCGGA | 1 cut(s) | 478 |
| AciI | CCGC | 1 cut(s) | 1813 |
| AclWI | GGATC | 4 cut(s) | 470, 483, 718, 1345 |
| AcoI | YGGCCR | 1 cut(s) | 2035 |
| AcsI | RAATTY | 3 cut(s) | 50, 571, 1924 |
| AcuI | CTGAAG | 2 cut(s) | 708, 912 |
| AcyI | GRCGYC | 1 cut(s) | 1459 |
| AfaI | GTAC | 2 cut(s) | 228, 236 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 42, 1421, 1524, 1525 |
| AflII | CTTAAG | 1 cut(s) | 1652 |
| AgeI | ACCGGT | 1 cut(s) | 1593 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1458 |
| AjiI | CACGTC | 1 cut(s) | 1918 |
| AjnI | CCWGG | 3 cut(s) | 1209, 1372, 1420 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1410, 1442 |
| Alw21I | GWGCWC | 3 cut(s) | 387, 983, 1003 |
| Alw26I | GTCTC | 3 cut(s) | 31, 1445, 1610 |
| Alw44I | GTGCAC | 3 cut(s) | 383, 979, 999 |
| AlwI | GGATC | 4 cut(s) | 470, 483, 718, 1345 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 686, 1190, 1816, 1966 |
| Aor13HI | TCCGGA | 1 cut(s) | 478 |
| AoxI | GGCC | 5 cut(s) | 61, 1117, 1340, 1892, 2035 |
| ApaLI | GTGCAC | 3 cut(s) | 383, 979, 999 |
| ApeKI | GCWGC | 7 cut(s) | 311, 785, 910, 1060, 1187, 1945, 2047 |
| ApoI | RAATTY | 3 cut(s) | 50, 571, 1924 |
| AseI | ATTAAT | 1 cut(s) | 1854 |
| AsiGI | ACCGGT | 1 cut(s) | 1593 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 323 |
| AspLEI | GCGC | 2 cut(s) | 1129, 1131 |
| AspS9I | GGNCC | 3 cut(s) | 62, 349, 1379 |
| AsuHPI | GGTGA | 3 cut(s) | 1091, 1633, 1639 |
| AvaII | GGWCC | 2 cut(s) | 349, 1379 |
| BaeGI | GKGCMC | 3 cut(s) | 387, 983, 1003 |
| BalI | TGGCCA | 1 cut(s) | 2037 |
| BamHI | GGATCC | 1 cut(s) | 475 |
| BanI | GGYRCC | 1 cut(s) | 1139 |
| BauI | CACGAG | 1 cut(s) | 1797 |
| BbsI | GAAGAC | 4 cut(s) | 267, 507, 731, 1988 |
| Bbv12I | GWGCWC | 3 cut(s) | 387, 983, 1003 |
| BbvI | GCAGC | 7 cut(s) | 298, 772, 922, 1072, 1174, 1957, 2034 |
| BccI | CCATC | 9 cut(s) | 188, 228, 893, 1109, 1159, 1618, 1799, 2027, 2049 |
| BceAI | ACGGC | 1 cut(s) | 457 |
| BciT130I | CCWGG | 3 cut(s) | 1211, 1374, 1422 |
| BcoDI | GTCTC | 3 cut(s) | 31, 1445, 1610 |
| BfaI | CTAG | 3 cut(s) | 375, 2097, 2101 |
| BfmI | CTRYAG | 3 cut(s) | 789, 1434, 2048 |
| BfrI | CTTAAG | 1 cut(s) | 1652 |
| BisI | GCNGC | 8 cut(s) | 312, 786, 911, 1061, 1188, 1814, 1946, 2048 |
| BlsI | GCNGC | 8 cut(s) | 313, 787, 912, 1062, 1189, 1815, 1947, 2049 |
| Bme1390I | CCNGG | 3 cut(s) | 1211, 1374, 1422 |
| Bme18I | GGWCC | 2 cut(s) | 349, 1379 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1458 |
| BmgBI | CACGTC | 1 cut(s) | 1918 |
| BmgT120I | GGNCC | 3 cut(s) | 62, 349, 1379 |
| BmiI | GGNNCC | 3 cut(s) | 351, 477, 1141 |
| BmrFI | CCNGG | 3 cut(s) | 1211, 1374, 1422 |
| BmrI | ACTGGG | 1 cut(s) | 59 |
| BmsI | GCATC | 7 cut(s) | 152, 546, 642, 680, 1072, 1633, 2034 |
| BmuI | ACTGGG | 1 cut(s) | 59 |
| BpiI | GAAGAC | 4 cut(s) | 267, 507, 731, 1988 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1734, 1766 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1386 |
| BpuEI | CTTGAG | 4 cut(s) | 215, 642, 1031, 1802 |
| BsaHI | GRCGYC | 1 cut(s) | 1459 |
| BsaI | GGTCTC | 1 cut(s) | 1445 |
| BsaJI | CCNNGG | 3 cut(s) | 36, 58, 1075 |
| BsaWI | WCCGGW | 3 cut(s) | 478, 1454, 1593 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 42, 1421, 1524, 1525 |
| Bse118I | RCCGGY | 1 cut(s) | 1593 |
| Bse1I | ACTGG | 2 cut(s) | 65, 1881 |
| Bse3DI | GCAATG | 1 cut(s) | 1512 |
| BseAI | TCCGGA | 1 cut(s) | 478 |
| BseBI | CCWGG | 3 cut(s) | 1211, 1374, 1422 |
| BseDI | CCNNGG | 3 cut(s) | 36, 58, 1075 |
| BseGI | GGATG | 4 cut(s) | 220, 802, 2049, 2060 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 42, 1421, 1524, 1525 |
| BseMI | GCAATG | 1 cut(s) | 1512 |
| BseMII | CTCAG | 5 cut(s) | 306, 387, 543, 666, 1557 |
| BseNI | ACTGG | 2 cut(s) | 65, 1881 |
| BsePI | GCGCGC | 1 cut(s) | 1127 |
| BseRI | GAGGAG | 1 cut(s) | 1742 |
| BseSI | GKGCMC | 3 cut(s) | 387, 983, 1003 |
| BseXI | GCAGC | 7 cut(s) | 298, 772, 922, 1072, 1174, 1957, 2034 |
| BseYI | CCCAGC | 1 cut(s) | 1934 |
| BsgI | GTGCAG | 1 cut(s) | 1196 |
| Bsh1236I | CGCG | 2 cut(s) | 1127, 1129 |
| BshFI | GGCC | 5 cut(s) | 63, 1119, 1342, 1894, 2037 |
| BshNI | GGYRCC | 1 cut(s) | 1139 |
| BshTI | ACCGGT | 1 cut(s) | 1593 |
| BsiHKAI | GWGCWC | 3 cut(s) | 387, 983, 1003 |
| BsiSI | CCGG | 3 cut(s) | 479, 1455, 1594 |
| BslFI | GGGAC | 4 cut(s) | 825, 1348, 1478, 1720 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 42, 1421, 1524, 1525 |
| BsmAI | GTCTC | 3 cut(s) | 31, 1445, 1610 |
| BsmBI | CGTCTC | 1 cut(s) | 1610 |
| BsmFI | GGGAC | 4 cut(s) | 825, 1348, 1478, 1720 |
| BsmI | GAATGC | 1 cut(s) | 488 |
| BsnI | GGCC | 5 cut(s) | 63, 1119, 1342, 1894, 2037 |
| Bso31I | GGTCTC | 1 cut(s) | 1445 |
| Bsp1286I | GDGCHC | 3 cut(s) | 387, 983, 1003 |
| Bsp13I | TCCGGA | 1 cut(s) | 478 |
| Bsp143I | GATC | 3 cut(s) | 475, 710, 1350 |
| Bsp19I | CCATGG | 3 cut(s) | 36, 58, 1075 |
| BspACI | CCGC | 1 cut(s) | 1813 |
| BspANI | GGCC | 5 cut(s) | 63, 1119, 1342, 1894, 2037 |
| BspCNI | CTCAG | 5 cut(s) | 307, 388, 544, 667, 1558 |
| BspEI | TCCGGA | 1 cut(s) | 478 |
| BspFNI | CGCG | 2 cut(s) | 1127, 1129 |
| BspHI | TCATGA | 3 cut(s) | 115, 850, 1272 |
| BspLI | GGNNCC | 3 cut(s) | 351, 477, 1141 |
| BspMAI | CTGCAG | 1 cut(s) | 2052 |
| BspPI | GGATC | 4 cut(s) | 470, 483, 718, 1345 |
| BspT107I | GGYRCC | 1 cut(s) | 1139 |
| BspTI | CTTAAG | 1 cut(s) | 1652 |
| BspTNI | GGTCTC | 1 cut(s) | 1445 |
| BsrDI | GCAATG | 1 cut(s) | 1512 |
| BsrFI | RCCGGY | 1 cut(s) | 1593 |
| BsrI | ACTGG | 2 cut(s) | 65, 1881 |
| BssAI | RCCGGY | 1 cut(s) | 1593 |
| BssECI | CCNNGG | 3 cut(s) | 36, 58, 1075 |
| BssHII | GCGCGC | 1 cut(s) | 1127 |
| BssMI | GATC | 3 cut(s) | 475, 710, 1350 |
| BssNI | GRCGYC | 1 cut(s) | 1459 |
| BssSI | CACGAG | 1 cut(s) | 1797 |
| BssT1I | CCWWGG | 3 cut(s) | 36, 58, 1075 |
| Bst2BI | CACGAG | 1 cut(s) | 1797 |
| Bst2UI | CCWGG | 3 cut(s) | 1211, 1374, 1422 |
| Bst4CI | ACNGT | 5 cut(s) | 296, 437, 1621, 1634, 1770 |
| Bst6I | CTCTTC | 2 cut(s) | 756, 1443 |
| BstACI | GRCGYC | 1 cut(s) | 1459 |
| BstAFI | CTTAAG | 1 cut(s) | 1652 |
| BstC8I | GCNNGC | 3 cut(s) | 595, 1129, 1228 |
| BstDEI | CTNAG | 8 cut(s) | 315, 396, 552, 634, 675, 1386, 1465, 1566 |
| BstDSI | CCRYGG | 3 cut(s) | 36, 58, 1075 |
| BstF5I | GGATG | 4 cut(s) | 220, 802, 2049, 2060 |
| BstFNI | CGCG | 2 cut(s) | 1127, 1129 |
| BstHHI | GCGC | 2 cut(s) | 1129, 1131 |
| BstKTI | GATC | 3 cut(s) | 478, 713, 1353 |
| BstMAI | GTCTC | 3 cut(s) | 31, 1445, 1610 |
| BstMBI | GATC | 3 cut(s) | 475, 710, 1350 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 308, 919, 1057, 1133 |
| BstNI | CCWGG | 3 cut(s) | 1211, 1374, 1422 |
| BstNSI | RCATGY | 2 cut(s) | 286, 1230 |
| BstSCI | CCNGG | 3 cut(s) | 1209, 1372, 1420 |
| BstSFI | CTRYAG | 3 cut(s) | 789, 1434, 2048 |
| BstSLI | GKGCMC | 3 cut(s) | 387, 983, 1003 |
| BstUI | CGCG | 2 cut(s) | 1127, 1129 |
| BstV1I | GCAGC | 7 cut(s) | 298, 772, 922, 1072, 1174, 1957, 2034 |
| BstV2I | GAAGAC | 4 cut(s) | 267, 507, 731, 1988 |
| BstX2I | RGATCY | 1 cut(s) | 475 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 37, 1373 |
| BstYI | RGATCY | 1 cut(s) | 475 |
| BsuRI | GGCC | 5 cut(s) | 63, 1119, 1342, 1894, 2037 |
| BtgI | CCRYGG | 3 cut(s) | 36, 58, 1075 |
| BtrI | CACGTC | 1 cut(s) | 1918 |
| BtsCI | GGATG | 4 cut(s) | 220, 802, 2049, 2060 |
| BtsI | GCAGTG | 1 cut(s) | 1916 |
| BtsIMutI | CAGTG | 2 cut(s) | 1766, 1916 |
| Cac8I | GCNNGC | 3 cut(s) | 595, 1129, 1228 |
| CaiI | CAGNNNCTG | 4 cut(s) | 686, 1190, 1816, 1966 |
| CciI | TCATGA | 3 cut(s) | 115, 850, 1272 |
| CfoI | GCGC | 2 cut(s) | 1129, 1131 |
| Cfr10I | RCCGGY | 1 cut(s) | 1593 |
| Cfr13I | GGNCC | 3 cut(s) | 62, 349, 1379 |
| CseI | GACGC | 1 cut(s) | 863 |
| CsiI | ACCWGGT | 3 cut(s) | 1209, 1372, 1420 |
| Csp6I | GTAC | 2 cut(s) | 227, 235 |
| CspAI | ACCGGT | 1 cut(s) | 1593 |
| CviQI | GTAC | 2 cut(s) | 227, 235 |
| DdeI | CTNAG | 8 cut(s) | 315, 396, 552, 634, 675, 1386, 1465, 1566 |
| DpnI | GATC | 3 cut(s) | 477, 712, 1352 |
| DpnII | GATC | 3 cut(s) | 475, 710, 1350 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1458 |
| EaeI | YGGCCR | 1 cut(s) | 2035 |
| Eam1104I | CTCTTC | 2 cut(s) | 756, 1443 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1458 |
| EarI | CTCTTC | 2 cut(s) | 756, 1443 |
| Eco130I | CCWWGG | 3 cut(s) | 36, 58, 1075 |
| Eco147I | AGGCCT | 1 cut(s) | 1894 |
| Eco31I | GGTCTC | 1 cut(s) | 1445 |
| Eco32I | GATATC | 1 cut(s) | 205 |
| Eco47I | GGWCC | 2 cut(s) | 349, 1379 |
| Eco57I | CTGAAG | 2 cut(s) | 708, 912 |
| EcoO109I | RGGNCCY | 1 cut(s) | 349 |
| EcoRII | CCWGG | 3 cut(s) | 1209, 1372, 1420 |
| EcoRV | GATATC | 1 cut(s) | 205 |
| EcoT14I | CCWWGG | 3 cut(s) | 36, 58, 1075 |
| ErhI | CCWWGG | 3 cut(s) | 36, 58, 1075 |
| Esp3I | CGTCTC | 1 cut(s) | 1610 |
| FaqI | GGGAC | 4 cut(s) | 825, 1348, 1478, 1720 |
| Fnu4HI | GCNGC | 8 cut(s) | 312, 786, 911, 1061, 1188, 1814, 1946, 2048 |
| FokI | GGATG | 4 cut(s) | 207, 809, 2056, 2067 |
| Fsp4HI | GCNGC | 8 cut(s) | 312, 786, 911, 1061, 1188, 1814, 1946, 2048 |
| FspBI | CTAG | 3 cut(s) | 375, 2097, 2101 |
| GlaI | GCGC | 2 cut(s) | 1128, 1130 |
| GluI | GCNGC | 8 cut(s) | 312, 786, 911, 1061, 1188, 1814, 1946, 2048 |
| GsaI | CCCAGC | 1 cut(s) | 1938 |
| HaeIII | GGCC | 5 cut(s) | 63, 1119, 1342, 1894, 2037 |
| HapII | CCGG | 3 cut(s) | 479, 1455, 1594 |
| HgaI | GACGC | 1 cut(s) | 863 |
| HhaI | GCGC | 2 cut(s) | 1129, 1131 |
| Hin1I | GRCGYC | 1 cut(s) | 1459 |
| Hin6I | GCGC | 2 cut(s) | 1127, 1129 |
| HinP1I | GCGC | 2 cut(s) | 1127, 1129 |
| HindIII | AAGCTT | 1 cut(s) | 1388 |
| HinfI | GANTC | 7 cut(s) | 119, 413, 512, 542, 677, 727, 878 |
| HpaII | CCGG | 3 cut(s) | 479, 1455, 1594 |
| HphI | GGTGA | 3 cut(s) | 1091, 1633, 1639 |
| Hpy166II | GTNNAC | 6 cut(s) | 385, 981, 1001, 1040, 1379, 1630 |
| Hpy8I | GTNNAC | 6 cut(s) | 385, 981, 1001, 1040, 1379, 1630 |
| Hpy99I | CGWCG | 2 cut(s) | 523, 1464 |
| HpyAV | CCTTC | 8 cut(s) | 20, 340, 683, 887, 931, 1732, 1865, 1966 |
| HpyCH4III | ACNGT | 5 cut(s) | 296, 437, 1621, 1634, 1770 |
| HpyCH4IV | ACGT | 3 cut(s) | 1357, 1459, 1917 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 308, 919, 1057, 1133 |
| HpyF3I | CTNAG | 8 cut(s) | 315, 396, 552, 634, 675, 1386, 1465, 1566 |
| HpySE526I | ACGT | 3 cut(s) | 1357, 1459, 1917 |
| Hsp92I | GRCGYC | 1 cut(s) | 1459 |
| HspAI | GCGC | 2 cut(s) | 1127, 1129 |
| Kpn2I | TCCGGA | 1 cut(s) | 478 |
| Kzo9I | GATC | 3 cut(s) | 475, 710, 1350 |
| LmnI | GCTCC | 1 cut(s) | 1723 |
| Lsp1109I | GCAGC | 7 cut(s) | 298, 772, 922, 1072, 1174, 1957, 2034 |
| LweI | GCATC | 7 cut(s) | 152, 546, 642, 680, 1072, 1633, 2034 |
| MabI | ACCWGGT | 3 cut(s) | 1209, 1372, 1420 |
| MaeI | CTAG | 3 cut(s) | 375, 2097, 2101 |
| MaeII | ACGT | 3 cut(s) | 1357, 1459, 1917 |
| MaeIII | GTNAC | 4 cut(s) | 437, 914, 953, 1245 |
| MalI | GATC | 3 cut(s) | 477, 712, 1352 |
| MboI | GATC | 3 cut(s) | 475, 710, 1350 |
| MfeI | CAATTG | 2 cut(s) | 647, 1582 |
| MflI | RGATCY | 1 cut(s) | 475 |
| MhlI | GDGCHC | 3 cut(s) | 387, 983, 1003 |
| MlsI | TGGCCA | 1 cut(s) | 2037 |
| MluNI | TGGCCA | 1 cut(s) | 2037 |
| MlyI | GAGTC | 4 cut(s) | 521, 686, 721, 887 |
| MmeI | TCCRAC | 1 cut(s) | 1378 |
| Mox20I | TGGCCA | 1 cut(s) | 2037 |
| MroI | TCCGGA | 1 cut(s) | 478 |
| MroXI | GAANNNNTTC | 1 cut(s) | 323 |
| MscI | TGGCCA | 1 cut(s) | 2037 |
| MseI | TTAA | 6 cut(s) | 339, 456, 1199, 1598, 1653, 1854 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1080 |
| Msp20I | TGGCCA | 1 cut(s) | 2037 |
| MspA1I | CMGCKG | 2 cut(s) | 1187, 1813 |
| MspCI | CTTAAG | 1 cut(s) | 1652 |
| MspI | CCGG | 3 cut(s) | 479, 1455, 1594 |
| MspR9I | CCNGG | 3 cut(s) | 1211, 1374, 1422 |
| MunI | CAATTG | 2 cut(s) | 647, 1582 |
| Mva1269I | GAATGC | 1 cut(s) | 488 |
| MvaI | CCWGG | 3 cut(s) | 1211, 1374, 1422 |
| MvnI | CGCG | 2 cut(s) | 1127, 1129 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 308, 919, 1057, 1133 |
| NcoI | CCATGG | 3 cut(s) | 36, 58, 1075 |
| NdeII | GATC | 3 cut(s) | 475, 710, 1350 |
| NlaIV | GGNNCC | 3 cut(s) | 351, 477, 1141 |
| NmuCI | GTSAC | 2 cut(s) | 953, 1245 |
| NspI | RCATGY | 2 cut(s) | 286, 1230 |
| PaeI | GCATGC | 1 cut(s) | 1230 |
| PagI | TCATGA | 3 cut(s) | 115, 850, 1272 |
| PauI | GCGCGC | 1 cut(s) | 1127 |
| PceI | AGGCCT | 1 cut(s) | 1894 |
| PctI | GAATGC | 1 cut(s) | 488 |
| PdmI | GAANNNNTTC | 1 cut(s) | 323 |
| PfeI | GAWTC | 3 cut(s) | 119, 413, 542 |
| PflFI | GACNNNGTC | 1 cut(s) | 1987 |
| PinAI | ACCGGT | 1 cut(s) | 1593 |
| PkrI | GCNGC | 8 cut(s) | 313, 787, 912, 1062, 1189, 1815, 1947, 2049 |
| PleI | GAGTC | 4 cut(s) | 520, 685, 721, 886 |
| PpsI | GAGTC | 4 cut(s) | 520, 685, 721, 886 |
| PpuMI | RGGWCCY | 1 cut(s) | 349 |
| PshBI | ATTAAT | 1 cut(s) | 1854 |
| Psp5II | RGGWCCY | 1 cut(s) | 349 |
| Psp6I | CCWGG | 3 cut(s) | 1209, 1372, 1420 |
| PspFI | CCCAGC | 1 cut(s) | 1934 |
| PspGI | CCWGG | 3 cut(s) | 1209, 1372, 1420 |
| PspN4I | GGNNCC | 3 cut(s) | 351, 477, 1141 |
| PspPI | GGNCC | 3 cut(s) | 62, 349, 1379 |
| PspPPI | RGGWCCY | 1 cut(s) | 349 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 166, 198 |
| PstI | CTGCAG | 1 cut(s) | 2052 |
| PstNI | CAGNNNCTG | 4 cut(s) | 686, 1190, 1816, 1966 |
| PsuI | RGATCY | 1 cut(s) | 475 |
| PsyI | GACNNNGTC | 1 cut(s) | 1987 |
| PteI | GCGCGC | 1 cut(s) | 1127 |
| PvuII | CAGCTG | 1 cut(s) | 1187 |
| RsaI | GTAC | 2 cut(s) | 228, 236 |
| RsaNI | GTAC | 2 cut(s) | 227, 235 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1080 |
| SaqAI | TTAA | 6 cut(s) | 339, 456, 1199, 1598, 1653, 1854 |
| SatI | GCNGC | 8 cut(s) | 312, 786, 911, 1061, 1188, 1814, 1946, 2048 |
| Sau3AI | GATC | 3 cut(s) | 475, 710, 1350 |
| Sau96I | GGNCC | 3 cut(s) | 62, 349, 1379 |
| SchI | GAGTC | 4 cut(s) | 521, 686, 721, 887 |
| ScrFI | CCNGG | 3 cut(s) | 1211, 1374, 1422 |
| SduI | GDGCHC | 3 cut(s) | 387, 983, 1003 |
| SexAI | ACCWGGT | 3 cut(s) | 1209, 1372, 1420 |
| SfaNI | GCATC | 7 cut(s) | 152, 546, 642, 680, 1072, 1633, 2034 |
| SfcI | CTRYAG | 3 cut(s) | 789, 1434, 2048 |
| SinI | GGWCC | 2 cut(s) | 349, 1379 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1080 |
| SmlI | CTYRAG | 5 cut(s) | 230, 657, 1046, 1652, 1781 |
| SmoI | CTYRAG | 5 cut(s) | 230, 657, 1046, 1652, 1781 |
| SphI | GCATGC | 1 cut(s) | 1230 |
| SseBI | AGGCCT | 1 cut(s) | 1894 |
| SsiI | CCGC | 1 cut(s) | 1813 |
| SspMI | CTAG | 3 cut(s) | 375, 2097, 2101 |
| StuI | AGGCCT | 1 cut(s) | 1894 |
| StyD4I | CCNGG | 3 cut(s) | 1209, 1372, 1420 |
| StyI | CCWWGG | 3 cut(s) | 36, 58, 1075 |
| TaaI | ACNGT | 5 cut(s) | 296, 437, 1621, 1634, 1770 |
| TaiI | ACGT | 3 cut(s) | 1360, 1462, 1920 |
| TaqI | TCGA | 2 cut(s) | 521, 1429 |
| TaqII | GACCGA | 1 cut(s) | 1575 |
| TatI | WGTACW | 2 cut(s) | 226, 234 |
| TauI | GCSGC | 1 cut(s) | 1816 |
| TfiI | GAWTC | 3 cut(s) | 119, 413, 542 |
| Tru1I | TTAA | 6 cut(s) | 339, 456, 1199, 1598, 1653, 1854 |
| Tru9I | TTAA | 6 cut(s) | 339, 456, 1199, 1598, 1653, 1854 |
| TscAI | CASTG | 2 cut(s) | 1773, 1916 |
| TseFI | GTSAC | 2 cut(s) | 953, 1245 |
| TseI | GCWGC | 7 cut(s) | 311, 785, 910, 1060, 1187, 1945, 2047 |
| Tsp45I | GTSAC | 2 cut(s) | 953, 1245 |
| TspDTI | ATGAA | 7 cut(s) | 132, 534, 1289, 1675, 1679, 1821, 2043 |
| TspRI | CASTG | 2 cut(s) | 1773, 1916 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1987 |
| Vha464I | CTTAAG | 1 cut(s) | 1652 |
| VneI | GTGCAC | 3 cut(s) | 383, 979, 999 |
| VpaK11BI | GGWCC | 2 cut(s) | 349, 1379 |
| VspI | ATTAAT | 1 cut(s) | 1854 |
| XapI | RAATTY | 3 cut(s) | 50, 571, 1924 |
| XceI | RCATGY | 2 cut(s) | 286, 1230 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1373 |
| XmnI | GAANNNNTTC | 1 cut(s) | 323 |
| XspI | CTAG | 3 cut(s) | 375, 2097, 2101 |
| ZraI | GACGTC | 1 cut(s) | 1460 |