TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 74 - 142 | 3.8e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 285 - 368 | 2.6e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 359 - 416 | 2.4e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 414 - 486 | 1.4e-12 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 453 - 509 | 6.1e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 496 - 552 | 1.1e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 552 - 624 | 2.1e-07 | Leucine-rich repeat region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 939 |
| Acc36I | ACCTGC | 1 cut(s) | 316 |
| Acc65I | GGTACC | 1 cut(s) | 566 |
| AccB1I | GGYRCC | 2 cut(s) | 566, 1872 |
| AccI | GTMKAC | 1 cut(s) | 22 |
| AccII | CGCG | 2 cut(s) | 1454, 2109 |
| AccIII | TCCGGA | 1 cut(s) | 728 |
| AciI | CCGC | 3 cut(s) | 301, 1820, 2613 |
| AclI | AACGTT | 1 cut(s) | 748 |
| AclWI | GGATC | 6 cut(s) | 795, 897, 1296, 1572, 2765, 2778 |
| AcsI | RAATTY | 5 cut(s) | 225, 772, 922, 2102, 2526 |
| AcuI | CTGAAG | 1 cut(s) | 2573 |
| AdeI | CACNNNGTG | 1 cut(s) | 1828 |
| AfaI | GTAC | 3 cut(s) | 568, 1832, 2724 |
| AfeI | AGCGCT | 1 cut(s) | 1909 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 32, 1265, 1541, 1882 |
| AflII | CTTAAG | 2 cut(s) | 893, 1093 |
| AflIII | ACRYGT | 7 cut(s) | 547, 1176, 1314, 1452, 1590, 2725, 2738 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2347 |
| AjiI | CACGTC | 5 cut(s) | 1177, 1315, 1572, 1591, 2739 |
| AjnI | CCWGG | 1 cut(s) | 2497 |
| AleI | CACNNNNGTG | 1 cut(s) | 2489 |
| Alw21I | GWGCWC | 1 cut(s) | 333 |
| Alw26I | GTCTC | 6 cut(s) | 845, 1157, 1880, 2047, 2145, 2244 |
| AlwI | GGATC | 6 cut(s) | 795, 897, 1296, 1572, 2765, 2778 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2045 |
| Aor13HI | TCCGGA | 1 cut(s) | 728 |
| Aor51HI | AGCGCT | 1 cut(s) | 1909 |
| AoxI | GGCC | 2 cut(s) | 342, 951 |
| ApeKI | GCWGC | 6 cut(s) | 143, 1339, 1840, 2956, 2959, 2962 |
| ApoI | RAATTY | 5 cut(s) | 225, 772, 922, 2102, 2526 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2025, 2057, 2057, 2089 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 228, 1935 |
| Asp718I | GGTACC | 1 cut(s) | 566 |
| AspA2I | CCTAGG | 1 cut(s) | 2543 |
| AspLEI | GCGC | 2 cut(s) | 940, 1910 |
| AspS9I | GGNCC | 2 cut(s) | 343, 2842 |
| AsuC2I | CCSGG | 2 cut(s) | 2259, 2441 |
| AsuHPI | GGTGA | 7 cut(s) | 269, 290, 417, 1772, 1915, 2486, 2896 |
| AsuII | TTCGAA | 1 cut(s) | 586 |
| AsuNHI | GCTAGC | 1 cut(s) | 2923 |
| AvaII | GGWCC | 1 cut(s) | 2842 |
| AvrII | CCTAGG | 1 cut(s) | 2543 |
| BaeGI | GKGCMC | 2 cut(s) | 1877, 2679 |
| BamHI | GGATCC | 1 cut(s) | 2770 |
| BanI | GGYRCC | 2 cut(s) | 566, 1872 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1920, 1952 |
| BauI | CACGAG | 1 cut(s) | 2897 |
| BbsI | GAAGAC | 2 cut(s) | 71, 2075 |
| Bbv12I | GWGCWC | 1 cut(s) | 333 |
| BbvI | GCAGC | 5 cut(s) | 130, 1326, 1827, 2946, 2968 |
| BccI | CCATC | 5 cut(s) | 26, 940, 1282, 1406, 2618 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1961, 1995 |
| BciT130I | CCWGG | 1 cut(s) | 2499 |
| BclI | TGATCA | 2 cut(s) | 2716, 2875 |
| BcnI | CCSGG | 2 cut(s) | 2259, 2441 |
| BcoDI | GTCTC | 6 cut(s) | 845, 1157, 1880, 2047, 2145, 2244 |
| BfaI | CTAG | 8 cut(s) | 287, 758, 843, 1850, 1859, 2544, 2759, 2924 |
| BfmI | CTRYAG | 3 cut(s) | 2006, 2068, 2960 |
| BfoI | RGCGCY | 1 cut(s) | 1911 |
| BfrI | CTTAAG | 2 cut(s) | 893, 1093 |
| BfuAI | ACCTGC | 1 cut(s) | 316 |
| BglII | AGATCT | 1 cut(s) | 2398 |
| BisI | GCNGC | 7 cut(s) | 144, 1340, 1820, 1841, 2957, 2960, 2963 |
| BlnI | CCTAGG | 1 cut(s) | 2543 |
| BlsI | GCNGC | 7 cut(s) | 145, 1341, 1821, 1842, 2958, 2961, 2964 |
| Bme1390I | CCNGG | 3 cut(s) | 2259, 2441, 2499 |
| Bme18I | GGWCC | 1 cut(s) | 2842 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2347 |
| BmgBI | CACGTC | 5 cut(s) | 1177, 1315, 1572, 1591, 2739 |
| BmgT120I | GGNCC | 2 cut(s) | 343, 2842 |
| BmiI | GGNNCC | 4 cut(s) | 568, 1874, 2772, 2843 |
| BmrFI | CCNGG | 3 cut(s) | 2259, 2441, 2499 |
| BmsI | GCATC | 7 cut(s) | 366, 528, 670, 1228, 1935, 2018, 2103 |
| BmtI | GCTAGC | 1 cut(s) | 2927 |
| BpiI | GAAGAC | 2 cut(s) | 71, 2075 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 168, 200, 1033, 1065, 2239, 2271 |
| BpmI | CTGGAG | 1 cut(s) | 648 |
| Bpu14I | TTCGAA | 1 cut(s) | 586 |
| BpuEI | CTTGAG | 3 cut(s) | 676, 869, 938 |
| BpuMI | CCSGG | 2 cut(s) | 2259, 2441 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1273, 2874 |
| BsaJI | CCNNGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| BsaWI | WCCGGW | 1 cut(s) | 728 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 32, 1265, 1541, 1882 |
| Bse118I | RCCGGY | 1 cut(s) | 2390 |
| Bse1I | ACTGG | 1 cut(s) | 2244 |
| Bse3DI | GCAATG | 3 cut(s) | 124, 237, 933 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1273, 2874 |
| BseAI | TCCGGA | 1 cut(s) | 728 |
| BseBI | CCWGG | 1 cut(s) | 2499 |
| BseDI | CCNNGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| BseGI | GGATG | 9 cut(s) | 37, 214, 356, 381, 1016, 1154, 1802, 2033, 2200 |
| BseJI | GATNNNNATC | 2 cut(s) | 1273, 2874 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 32, 1265, 1541, 1882 |
| BseMI | GCAATG | 3 cut(s) | 124, 237, 933 |
| BseMII | CTCAG | 2 cut(s) | 2550, 2840 |
| BseNI | ACTGG | 1 cut(s) | 2244 |
| BseSI | GKGCMC | 2 cut(s) | 1877, 2679 |
| BseXI | GCAGC | 5 cut(s) | 130, 1326, 1827, 2946, 2968 |
| BsgI | GTGCAG | 1 cut(s) | 548 |
| Bsh1236I | CGCG | 2 cut(s) | 1454, 2109 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2700 |
| BshFI | GGCC | 2 cut(s) | 344, 953 |
| BshNI | GGYRCC | 2 cut(s) | 566, 1872 |
| BsiEI | CGRYCG | 1 cut(s) | 2700 |
| BsiHKAI | GWGCWC | 1 cut(s) | 333 |
| BsiSI | CCGG | 5 cut(s) | 729, 2087, 2258, 2391, 2441 |
| BslFI | GGGAC | 3 cut(s) | 734, 2274, 2525 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 32, 1265, 1541, 1882 |
| BsmAI | GTCTC | 6 cut(s) | 845, 1157, 1880, 2047, 2145, 2244 |
| BsmFI | GGGAC | 3 cut(s) | 734, 2274, 2525 |
| BsmI | GAATGC | 3 cut(s) | 10, 997, 2116 |
| BsnI | GGCC | 2 cut(s) | 344, 953 |
| Bsp119I | TTCGAA | 1 cut(s) | 586 |
| Bsp1286I | GDGCHC | 3 cut(s) | 333, 1877, 2679 |
| Bsp13I | TCCGGA | 1 cut(s) | 728 |
| Bsp1407I | TGTACA | 1 cut(s) | 2722 |
| Bsp143I | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| Bsp19I | CCATGG | 1 cut(s) | 360 |
| Bsp68I | TCGCGA | 1 cut(s) | 2109 |
| BspACI | CCGC | 3 cut(s) | 301, 1820, 2613 |
| BspANI | GGCC | 2 cut(s) | 344, 953 |
| BspCNI | CTCAG | 2 cut(s) | 2551, 2841 |
| BspEI | TCCGGA | 1 cut(s) | 728 |
| BspFNI | CGCG | 2 cut(s) | 1454, 2109 |
| BspHI | TCATGA | 3 cut(s) | 463, 2503, 2713 |
| BspLI | GGNNCC | 4 cut(s) | 568, 1874, 2772, 2843 |
| BspMAI | CTGCAG | 2 cut(s) | 2072, 2964 |
| BspMI | ACCTGC | 1 cut(s) | 316 |
| BspOI | GCTAGC | 1 cut(s) | 2927 |
| BspPI | GGATC | 6 cut(s) | 795, 897, 1296, 1572, 2765, 2778 |
| BspQI | GCTCTTC | 1 cut(s) | 1329 |
| BspT104I | TTCGAA | 1 cut(s) | 586 |
| BspT107I | GGYRCC | 2 cut(s) | 566, 1872 |
| BspTI | CTTAAG | 2 cut(s) | 893, 1093 |
| BsrDI | GCAATG | 3 cut(s) | 124, 237, 933 |
| BsrFI | RCCGGY | 1 cut(s) | 2390 |
| BsrGI | TGTACA | 1 cut(s) | 2722 |
| BsrI | ACTGG | 1 cut(s) | 2244 |
| BssAI | RCCGGY | 1 cut(s) | 2390 |
| BssECI | CCNNGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| BssMI | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| BssSI | CACGAG | 1 cut(s) | 2897 |
| BssT1I | CCWWGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| Bst2BI | CACGAG | 1 cut(s) | 2897 |
| Bst2UI | CCWGG | 1 cut(s) | 2499 |
| Bst4CI | ACNGT | 8 cut(s) | 97, 203, 217, 611, 1826, 2373, 2641, 2672 |
| Bst6I | CTCTTC | 2 cut(s) | 1329, 1941 |
| BstAFI | CTTAAG | 2 cut(s) | 893, 1093 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 385 |
| BstAUI | TGTACA | 1 cut(s) | 2722 |
| BstBI | TTCGAA | 1 cut(s) | 586 |
| BstC8I | GCNNGC | 4 cut(s) | 2092, 2388, 2392, 2925 |
| BstDEI | CTNAG | 6 cut(s) | 312, 593, 689, 2395, 2559, 2849 |
| BstDSI | CCRYGG | 1 cut(s) | 360 |
| BstF5I | GGATG | 9 cut(s) | 37, 214, 356, 381, 1016, 1154, 1802, 2033, 2200 |
| BstFNI | CGCG | 2 cut(s) | 1454, 2109 |
| BstH2I | RGCGCY | 1 cut(s) | 1911 |
| BstHHI | GCGC | 2 cut(s) | 940, 1910 |
| BstKTI | GATC | 9 cut(s) | 790, 892, 1291, 1567, 1981, 2401, 2719, 2773, 2878 |
| BstMAI | GTCTC | 6 cut(s) | 845, 1157, 1880, 2047, 2145, 2244 |
| BstMBI | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| BstMCI | CGRYCG | 1 cut(s) | 2700 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 385, 2106, 2924, 2953, 2962 |
| BstNI | CCWGG | 1 cut(s) | 2499 |
| BstNSI | RCATGY | 6 cut(s) | 246, 551, 2094, 2390, 2408, 2729 |
| BstSCI | CCNGG | 3 cut(s) | 2257, 2439, 2497 |
| BstSFI | CTRYAG | 3 cut(s) | 2006, 2068, 2960 |
| BstSLI | GKGCMC | 2 cut(s) | 1877, 2679 |
| BstUI | CGCG | 2 cut(s) | 1454, 2109 |
| BstV1I | GCAGC | 5 cut(s) | 130, 1326, 1827, 2946, 2968 |
| BstV2I | GAAGAC | 2 cut(s) | 71, 2075 |
| BstX2I | RGATCY | 5 cut(s) | 889, 1288, 1564, 2398, 2770 |
| BstYI | RGATCY | 5 cut(s) | 889, 1288, 1564, 2398, 2770 |
| BsuRI | GGCC | 2 cut(s) | 344, 953 |
| BtgI | CCRYGG | 1 cut(s) | 360 |
| BtrI | CACGTC | 5 cut(s) | 1177, 1315, 1572, 1591, 2739 |
| BtsCI | GGATG | 9 cut(s) | 37, 214, 356, 381, 1016, 1154, 1802, 2033, 2200 |
| BtsI | GCAGTG | 1 cut(s) | 2925 |
| BtsIMutI | CAGTG | 3 cut(s) | 213, 1831, 2925 |
| BtuMI | TCGCGA | 1 cut(s) | 2109 |
| BveI | ACCTGC | 1 cut(s) | 316 |
| Cac8I | GCNNGC | 4 cut(s) | 2092, 2388, 2392, 2925 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2045 |
| CciI | TCATGA | 3 cut(s) | 463, 2503, 2713 |
| CfoI | GCGC | 2 cut(s) | 940, 1910 |
| Cfr10I | RCCGGY | 1 cut(s) | 2390 |
| Cfr13I | GGNCC | 2 cut(s) | 343, 2842 |
| CseI | GACGC | 5 cut(s) | 627, 1390, 1443, 1736, 2720 |
| Csp6I | GTAC | 3 cut(s) | 567, 1831, 2723 |
| CviQI | GTAC | 3 cut(s) | 567, 1831, 2723 |
| DdeI | CTNAG | 6 cut(s) | 312, 593, 689, 2395, 2559, 2849 |
| DpnI | GATC | 9 cut(s) | 789, 891, 1290, 1566, 1980, 2400, 2718, 2772, 2877 |
| DpnII | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| DraI | TTTAAA | 1 cut(s) | 13 |
| DraIII | CACNNNGTG | 1 cut(s) | 1828 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2347 |
| Eam1104I | CTCTTC | 2 cut(s) | 1329, 1941 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2347 |
| EarI | CTCTTC | 2 cut(s) | 1329, 1941 |
| Eco130I | CCWWGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| Eco47I | GGWCC | 1 cut(s) | 2842 |
| Eco47III | AGCGCT | 1 cut(s) | 1909 |
| Eco57I | CTGAAG | 1 cut(s) | 2573 |
| EcoO109I | RGGNCCY | 1 cut(s) | 343 |
| EcoRII | CCWGG | 1 cut(s) | 2497 |
| EcoT14I | CCWWGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| EcoT22I | ATGCAT | 2 cut(s) | 381, 2096 |
| ErhI | CCWWGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 10, 42, 887, 919 |
| FaqI | GGGAC | 3 cut(s) | 734, 2274, 2525 |
| FbaI | TGATCA | 2 cut(s) | 2716, 2875 |
| FblI | GTMKAC | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 7 cut(s) | 144, 1340, 1820, 1841, 2957, 2960, 2963 |
| FokI | GGATG | 9 cut(s) | 44, 221, 343, 388, 1023, 1161, 1809, 2040, 2207 |
| Fsp4HI | GCNGC | 7 cut(s) | 144, 1340, 1820, 1841, 2957, 2960, 2963 |
| FspBI | CTAG | 8 cut(s) | 287, 758, 843, 1850, 1859, 2544, 2759, 2924 |
| FspI | TGCGCA | 1 cut(s) | 939 |
| GlaI | GCGC | 2 cut(s) | 939, 1909 |
| GluI | GCNGC | 7 cut(s) | 144, 1340, 1820, 1841, 2957, 2960, 2963 |
| GsuI | CTGGAG | 1 cut(s) | 648 |
| HaeII | RGCGCY | 1 cut(s) | 1911 |
| HaeIII | GGCC | 2 cut(s) | 344, 953 |
| HapII | CCGG | 5 cut(s) | 729, 2087, 2258, 2391, 2441 |
| HgaI | GACGC | 5 cut(s) | 627, 1390, 1443, 1736, 2720 |
| HhaI | GCGC | 2 cut(s) | 940, 1910 |
| Hin6I | GCGC | 2 cut(s) | 938, 1908 |
| HinP1I | GCGC | 2 cut(s) | 938, 1908 |
| HincII | GTYRAC | 1 cut(s) | 23 |
| HindII | GTYRAC | 1 cut(s) | 23 |
| HindIII | AAGCTT | 2 cut(s) | 291, 896 |
| HpaII | CCGG | 5 cut(s) | 729, 2087, 2258, 2391, 2441 |
| HphI | GGTGA | 7 cut(s) | 269, 290, 417, 1772, 1915, 2486, 2896 |
| Hpy166II | GTNNAC | 6 cut(s) | 23, 415, 475, 1726, 1831, 2845 |
| Hpy8I | GTNNAC | 6 cut(s) | 23, 415, 475, 1726, 1831, 2845 |
| HpyCH4III | ACNGT | 8 cut(s) | 97, 203, 217, 611, 1826, 2373, 2641, 2672 |
| HpyCH4IV | ACGT | 9 cut(s) | 55, 327, 480, 748, 1176, 1314, 1571, 1590, 2738 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 385, 2106, 2924, 2953, 2962 |
| HpyF3I | CTNAG | 6 cut(s) | 312, 593, 689, 2395, 2559, 2849 |
| HpySE526I | ACGT | 9 cut(s) | 55, 327, 480, 748, 1176, 1314, 1571, 1590, 2738 |
| HspAI | GCGC | 2 cut(s) | 938, 1908 |
| Kpn2I | TCCGGA | 1 cut(s) | 728 |
| KpnI | GGTACC | 1 cut(s) | 570 |
| KroI | GCCGGC | 1 cut(s) | 2390 |
| KroNI | GCCGGC | 1 cut(s) | 2392 |
| Ksp22I | TGATCA | 2 cut(s) | 2716, 2875 |
| Kzo9I | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| LguI | GCTCTTC | 1 cut(s) | 1329 |
| LmnI | GCTCC | 3 cut(s) | 1105, 2615, 2755 |
| Lsp1109I | GCAGC | 5 cut(s) | 130, 1326, 1827, 2946, 2968 |
| LweI | GCATC | 7 cut(s) | 366, 528, 670, 1228, 1935, 2018, 2103 |
| MaeI | CTAG | 8 cut(s) | 287, 758, 843, 1850, 1859, 2544, 2759, 2924 |
| MaeII | ACGT | 9 cut(s) | 55, 327, 480, 748, 1176, 1314, 1571, 1590, 2738 |
| MaeIII | GTNAC | 5 cut(s) | 194, 2482, 2635, 2666, 2785 |
| MalI | GATC | 9 cut(s) | 789, 891, 1290, 1566, 1980, 2400, 2718, 2772, 2877 |
| MboI | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| MfeI | CAATTG | 7 cut(s) | 1143, 1281, 1350, 1419, 1626, 1695, 2279 |
| MflI | RGATCY | 5 cut(s) | 889, 1288, 1564, 2398, 2770 |
| MhlI | GDGCHC | 3 cut(s) | 333, 1877, 2679 |
| MluI | ACGCGT | 1 cut(s) | 1452 |
| MlyI | GAGTC | 2 cut(s) | 835, 2711 |
| MmeI | TCCRAC | 5 cut(s) | 778, 854, 884, 1471, 2396 |
| Mph1103I | ATGCAT | 2 cut(s) | 381, 2096 |
| MroI | TCCGGA | 1 cut(s) | 728 |
| MroNI | GCCGGC | 1 cut(s) | 2390 |
| MroXI | GAANNNNTTC | 2 cut(s) | 228, 1935 |
| MslI | CAYNNNNRTG | 8 cut(s) | 374, 468, 524, 2321, 2342, 2489, 2718, 2724 |
| MspA1I | CMGCKG | 3 cut(s) | 2380, 2615, 2959 |
| MspCI | CTTAAG | 2 cut(s) | 893, 1093 |
| MspI | CCGG | 5 cut(s) | 729, 2087, 2258, 2391, 2441 |
| MspR9I | CCNGG | 3 cut(s) | 2259, 2441, 2499 |
| MunI | CAATTG | 7 cut(s) | 1143, 1281, 1350, 1419, 1626, 1695, 2279 |
| Mva1269I | GAATGC | 3 cut(s) | 10, 997, 2116 |
| MvaI | CCWGG | 1 cut(s) | 2499 |
| MvnI | CGCG | 2 cut(s) | 1454, 2109 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 385, 2106, 2924, 2953, 2962 |
| NaeI | GCCGGC | 1 cut(s) | 2392 |
| NciI | CCSGG | 2 cut(s) | 2259, 2441 |
| NcoI | CCATGG | 1 cut(s) | 360 |
| NdeII | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| NgoMIV | GCCGGC | 1 cut(s) | 2390 |
| NheI | GCTAGC | 1 cut(s) | 2923 |
| NlaIV | GGNNCC | 4 cut(s) | 568, 1874, 2772, 2843 |
| NmuCI | GTSAC | 4 cut(s) | 2482, 2635, 2666, 2785 |
| NruI | TCGCGA | 1 cut(s) | 2109 |
| NsbI | TGCGCA | 1 cut(s) | 939 |
| NsiI | ATGCAT | 2 cut(s) | 381, 2096 |
| NspI | RCATGY | 6 cut(s) | 246, 551, 2094, 2390, 2408, 2729 |
| NspV | TTCGAA | 1 cut(s) | 586 |
| OliI | CACNNNNGTG | 1 cut(s) | 2489 |
| PaeI | GCATGC | 2 cut(s) | 2094, 2390 |
| PagI | TCATGA | 3 cut(s) | 463, 2503, 2713 |
| PciI | ACATGT | 2 cut(s) | 547, 2725 |
| PciSI | GCTCTTC | 1 cut(s) | 1329 |
| PctI | GAATGC | 3 cut(s) | 10, 997, 2116 |
| PdiI | GCCGGC | 1 cut(s) | 2392 |
| PdmI | GAANNNNTTC | 2 cut(s) | 228, 1935 |
| PflFI | GACNNNGTC | 1 cut(s) | 2701 |
| PfoI | TCCNGGA | 2 cut(s) | 2257, 2439 |
| PkrI | GCNGC | 7 cut(s) | 145, 1341, 1821, 1842, 2958, 2961, 2964 |
| PleI | GAGTC | 2 cut(s) | 834, 2710 |
| PpsI | GAGTC | 2 cut(s) | 834, 2710 |
| PscI | ACATGT | 2 cut(s) | 547, 2725 |
| Psp1406I | AACGTT | 1 cut(s) | 748 |
| Psp6I | CCWGG | 1 cut(s) | 2497 |
| PspGI | CCWGG | 1 cut(s) | 2497 |
| PspN4I | GGNNCC | 4 cut(s) | 568, 1874, 2772, 2843 |
| PspPI | GGNCC | 2 cut(s) | 343, 2842 |
| PstI | CTGCAG | 2 cut(s) | 2072, 2964 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2045 |
| PsuI | RGATCY | 5 cut(s) | 889, 1288, 1564, 2398, 2770 |
| PsyI | GACNNNGTC | 1 cut(s) | 2701 |
| PvuII | CAGCTG | 2 cut(s) | 2380, 2959 |
| RruI | TCGCGA | 1 cut(s) | 2109 |
| RsaI | GTAC | 3 cut(s) | 568, 1832, 2724 |
| RsaNI | GTAC | 3 cut(s) | 567, 1831, 2723 |
| RseI | CAYNNNNRTG | 8 cut(s) | 374, 468, 524, 2321, 2342, 2489, 2718, 2724 |
| SalI | GTCGAC | 1 cut(s) | 21 |
| SapI | GCTCTTC | 1 cut(s) | 1329 |
| SatI | GCNGC | 7 cut(s) | 144, 1340, 1820, 1841, 2957, 2960, 2963 |
| Sau3AI | GATC | 9 cut(s) | 787, 889, 1288, 1564, 1978, 2398, 2716, 2770, 2875 |
| Sau96I | GGNCC | 2 cut(s) | 343, 2842 |
| SchI | GAGTC | 2 cut(s) | 835, 2711 |
| ScrFI | CCNGG | 3 cut(s) | 2259, 2441, 2499 |
| SduI | GDGCHC | 3 cut(s) | 333, 1877, 2679 |
| SfaNI | GCATC | 7 cut(s) | 366, 528, 670, 1228, 1935, 2018, 2103 |
| SfcI | CTRYAG | 3 cut(s) | 2006, 2068, 2960 |
| SfuI | TTCGAA | 1 cut(s) | 586 |
| SinI | GGWCC | 1 cut(s) | 2842 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 374, 468, 524, 2321, 2342, 2489, 2718, 2724 |
| SmlI | CTYRAG | 5 cut(s) | 655, 848, 893, 917, 1093 |
| SmoI | CTYRAG | 5 cut(s) | 655, 848, 893, 917, 1093 |
| SphI | GCATGC | 2 cut(s) | 2094, 2390 |
| SsiI | CCGC | 3 cut(s) | 301, 1820, 2613 |
| SspI | AATATT | 1 cut(s) | 583 |
| SspMI | CTAG | 8 cut(s) | 287, 758, 843, 1850, 1859, 2544, 2759, 2924 |
| StyD4I | CCNGG | 3 cut(s) | 2257, 2439, 2497 |
| StyI | CCWWGG | 7 cut(s) | 360, 1023, 1161, 1299, 1368, 1575, 2543 |
| TaaI | ACNGT | 8 cut(s) | 97, 203, 217, 611, 1826, 2373, 2641, 2672 |
| TaiI | ACGT | 9 cut(s) | 58, 330, 483, 751, 1179, 1317, 1574, 1593, 2741 |
| TaqI | TCGA | 7 cut(s) | 22, 586, 976, 1194, 2064, 2149, 2782 |
| TaqII | GACCGA | 1 cut(s) | 2714 |
| TatI | WGTACW | 1 cut(s) | 2722 |
| TauI | GCSGC | 1 cut(s) | 1822 |
| TscAI | CASTG | 3 cut(s) | 220, 1831, 2925 |
| TseFI | GTSAC | 4 cut(s) | 2482, 2635, 2666, 2785 |
| TseI | GCWGC | 6 cut(s) | 143, 1339, 1840, 2956, 2959, 2962 |
| Tsp45I | GTSAC | 4 cut(s) | 2482, 2635, 2666, 2785 |
| TspGWI | ACGGA | 2 cut(s) | 1848, 2815 |
| TspRI | CASTG | 3 cut(s) | 220, 1831, 2925 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2701 |
| Vha464I | CTTAAG | 2 cut(s) | 893, 1093 |
| VpaK11BI | GGWCC | 1 cut(s) | 2842 |
| XapI | RAATTY | 5 cut(s) | 225, 772, 922, 2102, 2526 |
| XbaI | TCTAGA | 3 cut(s) | 757, 1849, 1858 |
| XceI | RCATGY | 6 cut(s) | 246, 551, 2094, 2390, 2408, 2729 |
| XmaJI | CCTAGG | 1 cut(s) | 2543 |
| XmiI | GTMKAC | 1 cut(s) | 22 |
| XmnI | GAANNNNTTC | 2 cut(s) | 228, 1935 |
| XspI | CTAG | 8 cut(s) | 287, 758, 843, 1850, 1859, 2544, 2759, 2924 |
| Zsp2I | ATGCAT | 2 cut(s) | 381, 2096 |