TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 26 - 191 | 6.8e-51 | TIR domain |
| TIR_2 | PF13676 | 28 - 122 | 6.4e-14 | TIR domain |
| AAA_16 | PF13191 | 202 - 316 | 6.5e-06 | AAA ATPase domain |
| NB-ARC | PF00931 | 204 - 374 | 1.1e-21 | NB-ARC domain |
| ATPase_2 | PF01637 | 209 - 319 | 5.9e-06 | ATPase domain predominantly from Archaea |
| WHD_ROQ1 | PF23282 | 445 - 513 | 5.3e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 681 - 751 | 1.7e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 705 - 789 | 1.7e-09 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 719 - 859 | 1e-05 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 775 - 860 | 1.3e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 777 - 846 | 1.2e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_8 | PF13855 | 778 - 835 | 5.5e-06 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 2645 |
| AccII | CGCG | 1 cut(s) | 1677 |
| AciI | CCGC | 4 cut(s) | 690, 1675, 1677, 2677 |
| AcoI | YGGCCR | 1 cut(s) | 1966 |
| AcuI | CTGAAG | 2 cut(s) | 79, 905 |
| AfaI | GTAC | 5 cut(s) | 134, 2235, 2288, 2520, 2573 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 564, 1726, 1777, 1964, 2422 |
| AflII | CTTAAG | 2 cut(s) | 632, 2084 |
| AgeI | ACCGGT | 1 cut(s) | 2623 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2116, 2401 |
| AjnI | CCWGG | 4 cut(s) | 323, 390, 2130, 2415 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 958, 990 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2072, 2104 |
| Alw21I | GWGCWC | 1 cut(s) | 1868 |
| Alw26I | GTCTC | 5 cut(s) | 1542, 1976, 2103, 2208, 2388 |
| AoxI | GGCC | 6 cut(s) | 124, 388, 1452, 1966, 2188, 2473 |
| ApeKI | GCWGC | 3 cut(s) | 461, 476, 2014 |
| AsiGI | ACCGGT | 1 cut(s) | 2623 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2613 |
| AspS9I | GGNCC | 3 cut(s) | 388, 983, 1780 |
| AsuHPI | GGTGA | 5 cut(s) | 113, 404, 410, 1382, 1990 |
| AvaII | GGWCC | 2 cut(s) | 983, 1780 |
| BaeGI | GKGCMC | 1 cut(s) | 1036 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2502, 2535 |
| BauI | CACGAG | 2 cut(s) | 615, 2703 |
| BbsI | GAAGAC | 3 cut(s) | 630, 1479, 1512 |
| Bbv12I | GWGCWC | 1 cut(s) | 1868 |
| BbvCI | CCTCAGC | 1 cut(s) | 416 |
| BbvI | GCAGC | 3 cut(s) | 473, 488, 2001 |
| BccI | CCATC | 6 cut(s) | 395, 500, 2099, 2245, 2444, 2530 |
| BceAI | ACGGC | 2 cut(s) | 1953, 2346 |
| BciT130I | CCWGG | 4 cut(s) | 325, 392, 2132, 2417 |
| BciVI | GTATCC | 1 cut(s) | 1428 |
| BcoDI | GTCTC | 5 cut(s) | 1542, 1976, 2103, 2208, 2388 |
| BfaI | CTAG | 3 cut(s) | 1400, 2276, 2561 |
| BfmI | CTRYAG | 1 cut(s) | 2015 |
| BfrI | CTTAAG | 2 cut(s) | 632, 2084 |
| BfuI | GTATCC | 1 cut(s) | 1428 |
| BglII | AGATCT | 4 cut(s) | 303, 1210, 2278, 2563 |
| BisI | GCNGC | 4 cut(s) | 462, 477, 2015, 2678 |
| BlsI | GCNGC | 4 cut(s) | 463, 478, 2016, 2679 |
| Bme1390I | CCNGG | 4 cut(s) | 325, 392, 2132, 2417 |
| Bme18I | GGWCC | 2 cut(s) | 983, 1780 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2116, 2401 |
| BmgT120I | GGNCC | 3 cut(s) | 388, 983, 1780 |
| BmiI | GGNNCC | 2 cut(s) | 19, 1781 |
| BmrFI | CCNGG | 4 cut(s) | 325, 392, 2132, 2417 |
| BmrI | ACTGGG | 1 cut(s) | 2157 |
| BmsI | GCATC | 6 cut(s) | 278, 1479, 1641, 1725, 2253, 2538 |
| BmuI | ACTGGG | 1 cut(s) | 2157 |
| BpiI | GAAGAC | 3 cut(s) | 630, 1479, 1512 |
| BpmI | CTGGAG | 1 cut(s) | 2573 |
| Bpu10I | CCTNAGC | 1 cut(s) | 416 |
| BpuEI | CTTGAG | 2 cut(s) | 1619, 1795 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2562 |
| BsaJI | CCNNGG | 5 cut(s) | 13, 1675, 1720, 2049, 2484 |
| BsaWI | WCCGGW | 2 cut(s) | 2623, 2794 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 783, 813, 1737, 1767 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 564, 1726, 1777, 1964, 2422 |
| Bse118I | RCCGGY | 1 cut(s) | 2623 |
| Bse1I | ACTGG | 3 cut(s) | 2152, 2191, 2476 |
| Bse3DI | GCAATG | 3 cut(s) | 751, 1316, 2668 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2562 |
| BseBI | CCWGG | 4 cut(s) | 325, 392, 2132, 2417 |
| BseDI | CCNNGG | 5 cut(s) | 13, 1675, 1720, 2049, 2484 |
| BseGI | GGATG | 9 cut(s) | 295, 511, 595, 1138, 1240, 1494, 1588, 1740, 1954 |
| BseJI | GATNNNNATC | 1 cut(s) | 2562 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 564, 1726, 1777, 1964, 2422 |
| BseMI | GCAATG | 3 cut(s) | 751, 1316, 2668 |
| BseMII | CTCAG | 5 cut(s) | 80, 430, 2184, 2216, 2469 |
| BseNI | ACTGG | 3 cut(s) | 2152, 2191, 2476 |
| BseRI | GAGGAG | 1 cut(s) | 204 |
| BseSI | GKGCMC | 1 cut(s) | 1036 |
| BseXI | GCAGC | 3 cut(s) | 473, 488, 2001 |
| BseYI | CCCAGC | 1 cut(s) | 2076 |
| Bsh1236I | CGCG | 1 cut(s) | 1677 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2799 |
| BshFI | GGCC | 6 cut(s) | 126, 390, 1454, 1968, 2190, 2475 |
| BshTI | ACCGGT | 1 cut(s) | 2623 |
| BsiEI | CGRYCG | 1 cut(s) | 2799 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1868 |
| BsiSI | CCGG | 3 cut(s) | 2597, 2624, 2795 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 564, 1726, 1777, 1964, 2422 |
| BsmAI | GTCTC | 5 cut(s) | 1542, 1976, 2103, 2208, 2388 |
| BsmBI | CGTCTC | 1 cut(s) | 1976 |
| BsnI | GGCC | 6 cut(s) | 126, 390, 1454, 1968, 2190, 2475 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1036, 1868 |
| Bsp1407I | TGTACA | 1 cut(s) | 132 |
| BspACI | CCGC | 4 cut(s) | 690, 1675, 1677, 2677 |
| BspANI | GGCC | 6 cut(s) | 126, 390, 1454, 1968, 2190, 2475 |
| BspCNI | CTCAG | 5 cut(s) | 81, 429, 2183, 2217, 2468 |
| BspFNI | CGCG | 1 cut(s) | 1677 |
| BspLI | GGNNCC | 2 cut(s) | 19, 1781 |
| BspMAI | CTGCAG | 1 cut(s) | 2019 |
| BspQI | GCTCTTC | 1 cut(s) | 1100 |
| BspTI | CTTAAG | 2 cut(s) | 632, 2084 |
| BsrDI | GCAATG | 3 cut(s) | 751, 1316, 2668 |
| BsrFI | RCCGGY | 1 cut(s) | 2623 |
| BsrGI | TGTACA | 1 cut(s) | 132 |
| BsrI | ACTGG | 3 cut(s) | 2152, 2191, 2476 |
| BssAI | RCCGGY | 1 cut(s) | 2623 |
| BssECI | CCNNGG | 5 cut(s) | 13, 1675, 1720, 2049, 2484 |
| BssSI | CACGAG | 2 cut(s) | 615, 2703 |
| BssT1I | CCWWGG | 2 cut(s) | 2049, 2484 |
| Bst2BI | CACGAG | 2 cut(s) | 615, 2703 |
| Bst2UI | CCWGG | 4 cut(s) | 325, 392, 2132, 2417 |
| Bst4CI | ACNGT | 4 cut(s) | 880, 2286, 2501, 2571 |
| Bst6I | CTCTTC | 4 cut(s) | 28, 34, 1100, 2151 |
| BstAFI | CTTAAG | 2 cut(s) | 632, 2084 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 266 |
| BstAUI | TGTACA | 1 cut(s) | 132 |
| BstC8I | GCNNGC | 1 cut(s) | 2675 |
| BstDSI | CCRYGG | 2 cut(s) | 1675, 1720 |
| BstF5I | GGATG | 9 cut(s) | 295, 511, 595, 1138, 1240, 1494, 1588, 1740, 1954 |
| BstFNI | CGCG | 1 cut(s) | 1677 |
| BstMAI | GTCTC | 5 cut(s) | 1542, 1976, 2103, 2208, 2388 |
| BstMCI | CGRYCG | 1 cut(s) | 2799 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 266, 1157, 1674 |
| BstNI | CCWGG | 4 cut(s) | 325, 392, 2132, 2417 |
| BstNSI | RCATGY | 2 cut(s) | 1359, 1430 |
| BstSCI | CCNGG | 4 cut(s) | 323, 390, 2130, 2415 |
| BstSFI | CTRYAG | 1 cut(s) | 2015 |
| BstSLI | GKGCMC | 1 cut(s) | 1036 |
| BstUI | CGCG | 1 cut(s) | 1677 |
| BstV1I | GCAGC | 3 cut(s) | 473, 488, 2001 |
| BstV2I | GAAGAC | 3 cut(s) | 630, 1479, 1512 |
| BsuI | GTATCC | 1 cut(s) | 1428 |
| BsuRI | GGCC | 6 cut(s) | 126, 390, 1454, 1968, 2190, 2475 |
| BtgI | CCRYGG | 2 cut(s) | 1675, 1720 |
| BtsCI | GGATG | 9 cut(s) | 295, 511, 595, 1138, 1240, 1494, 1588, 1740, 1954 |
| BtsI | GCAGTG | 1 cut(s) | 2430 |
| BtsIMutI | CAGTG | 5 cut(s) | 876, 2184, 2430, 2469, 2497 |
| Cac8I | GCNNGC | 1 cut(s) | 2675 |
| Cfr10I | RCCGGY | 1 cut(s) | 2623 |
| Cfr13I | GGNCC | 3 cut(s) | 388, 983, 1780 |
| Cfr42I | CCGCGG | 1 cut(s) | 1678 |
| Csp6I | GTAC | 5 cut(s) | 133, 2234, 2287, 2519, 2572 |
| CspAI | ACCGGT | 1 cut(s) | 2623 |
| CviQI | GTAC | 5 cut(s) | 133, 2234, 2287, 2519, 2572 |
| DraI | TTTAAA | 1 cut(s) | 1366 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2116, 2401 |
| EaeI | YGGCCR | 1 cut(s) | 1966 |
| Eam1104I | CTCTTC | 4 cut(s) | 28, 34, 1100, 2151 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2116, 2401 |
| EarI | CTCTTC | 4 cut(s) | 28, 34, 1100, 2151 |
| Eco130I | CCWWGG | 2 cut(s) | 2049, 2484 |
| Eco147I | AGGCCT | 1 cut(s) | 1454 |
| Eco32I | GATATC | 2 cut(s) | 552, 1271 |
| Eco47I | GGWCC | 2 cut(s) | 983, 1780 |
| Eco57I | CTGAAG | 2 cut(s) | 79, 905 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1780 |
| EcoRI | GAATTC | 1 cut(s) | 1881 |
| EcoRII | CCWGG | 4 cut(s) | 323, 390, 2130, 2415 |
| EcoRV | GATATC | 2 cut(s) | 552, 1271 |
| EcoT14I | CCWWGG | 2 cut(s) | 2049, 2484 |
| EcoT22I | ATGCAT | 2 cut(s) | 271, 1494 |
| ErhI | CCWWGG | 2 cut(s) | 2049, 2484 |
| Esp3I | CGTCTC | 1 cut(s) | 1976 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 269, 301, 615, 647, 1329, 1361, 1652, 1684 |
| FauI | CCCGC | 1 cut(s) | 683 |
| FblI | GTMKAC | 1 cut(s) | 2645 |
| Fnu4HI | GCNGC | 4 cut(s) | 462, 477, 2015, 2678 |
| FokI | GGATG | 9 cut(s) | 302, 518, 582, 1145, 1247, 1501, 1595, 1747, 1941 |
| Fsp4HI | GCNGC | 4 cut(s) | 462, 477, 2015, 2678 |
| FspBI | CTAG | 3 cut(s) | 1400, 2276, 2561 |
| GluI | GCNGC | 4 cut(s) | 462, 477, 2015, 2678 |
| GsaI | CCCAGC | 1 cut(s) | 2080 |
| GsuI | CTGGAG | 1 cut(s) | 2573 |
| HaeIII | GGCC | 6 cut(s) | 126, 390, 1454, 1968, 2190, 2475 |
| HapII | CCGG | 3 cut(s) | 2597, 2624, 2795 |
| HincII | GTYRAC | 2 cut(s) | 148, 2646 |
| HindII | GTYRAC | 2 cut(s) | 148, 2646 |
| HindIII | AAGCTT | 3 cut(s) | 1083, 1681, 1906 |
| HinfI | GANTC | 9 cut(s) | 320, 611, 841, 873, 1180, 1285, 1535, 2609, 2782 |
| HpaI | GTTAAC | 1 cut(s) | 148 |
| HpaII | CCGG | 3 cut(s) | 2597, 2624, 2795 |
| HphI | GGTGA | 5 cut(s) | 113, 404, 410, 1382, 1990 |
| Hpy166II | GTNNAC | 5 cut(s) | 148, 340, 724, 934, 2646 |
| Hpy8I | GTNNAC | 5 cut(s) | 148, 340, 724, 934, 2646 |
| Hpy99I | CGWCG | 1 cut(s) | 370 |
| HpyCH4III | ACNGT | 4 cut(s) | 880, 2286, 2501, 2571 |
| HpyCH4IV | ACGT | 3 cut(s) | 1165, 2263, 2548 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 266, 1157, 1674 |
| HpySE526I | ACGT | 3 cut(s) | 1165, 2263, 2548 |
| KspAI | GTTAAC | 1 cut(s) | 148 |
| KspI | CCGCGG | 1 cut(s) | 1678 |
| LguI | GCTCTTC | 1 cut(s) | 1100 |
| LmnI | GCTCC | 3 cut(s) | 17, 208, 2272 |
| Lsp1109I | GCAGC | 3 cut(s) | 473, 488, 2001 |
| LweI | GCATC | 6 cut(s) | 278, 1479, 1641, 1725, 2253, 2538 |
| MaeI | CTAG | 3 cut(s) | 1400, 2276, 2561 |
| MaeII | ACGT | 3 cut(s) | 1165, 2263, 2548 |
| MaeIII | GTNAC | 9 cut(s) | 853, 1307, 1370, 1409, 2006, 2160, 2302, 2445, 2587 |
| MhlI | GDGCHC | 2 cut(s) | 1036, 1868 |
| MlyI | GAGTC | 1 cut(s) | 1544 |
| MmeI | TCCRAC | 7 cut(s) | 348, 434, 583, 1839, 2155, 2440, 2783 |
| Mph1103I | ATGCAT | 2 cut(s) | 271, 1494 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2613 |
| MspA1I | CMGCKG | 1 cut(s) | 1677 |
| MspCI | CTTAAG | 2 cut(s) | 632, 2084 |
| MspI | CCGG | 3 cut(s) | 2597, 2624, 2795 |
| MspR9I | CCNGG | 4 cut(s) | 325, 392, 2132, 2417 |
| MvaI | CCWGG | 4 cut(s) | 325, 392, 2132, 2417 |
| MvnI | CGCG | 1 cut(s) | 1677 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 266, 1157, 1674 |
| NlaIV | GGNNCC | 2 cut(s) | 19, 1781 |
| NmuCI | GTSAC | 3 cut(s) | 853, 1370, 1409 |
| NsiI | ATGCAT | 2 cut(s) | 271, 1494 |
| NspI | RCATGY | 2 cut(s) | 1359, 1430 |
| PceI | AGGCCT | 1 cut(s) | 1454 |
| PciSI | GCTCTTC | 1 cut(s) | 1100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1980 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2613 |
| PfeI | GAWTC | 8 cut(s) | 320, 611, 841, 873, 1180, 1285, 2609, 2782 |
| PinAI | ACCGGT | 1 cut(s) | 2623 |
| PkrI | GCNGC | 4 cut(s) | 463, 478, 2016, 2679 |
| PleI | GAGTC | 1 cut(s) | 1543 |
| PpsI | GAGTC | 1 cut(s) | 1543 |
| PpuMI | RGGWCCY | 1 cut(s) | 1780 |
| Psp5II | RGGWCCY | 1 cut(s) | 1780 |
| Psp6I | CCWGG | 4 cut(s) | 323, 390, 2130, 2415 |
| PspFI | CCCAGC | 1 cut(s) | 2076 |
| PspGI | CCWGG | 4 cut(s) | 323, 390, 2130, 2415 |
| PspN4I | GGNNCC | 2 cut(s) | 19, 1781 |
| PspPI | GGNCC | 3 cut(s) | 388, 983, 1780 |
| PspPPI | RGGWCCY | 1 cut(s) | 1780 |
| PstI | CTGCAG | 1 cut(s) | 2019 |
| RsaI | GTAC | 5 cut(s) | 134, 2235, 2288, 2520, 2573 |
| RsaNI | GTAC | 5 cut(s) | 133, 2234, 2287, 2519, 2572 |
| SacII | CCGCGG | 1 cut(s) | 1678 |
| SalI | GTCGAC | 1 cut(s) | 2644 |
| SapI | GCTCTTC | 1 cut(s) | 1100 |
| SatI | GCNGC | 4 cut(s) | 462, 477, 2015, 2678 |
| Sau96I | GGNCC | 3 cut(s) | 388, 983, 1780 |
| SchI | GAGTC | 1 cut(s) | 1544 |
| ScrFI | CCNGG | 4 cut(s) | 325, 392, 2132, 2417 |
| SduI | GDGCHC | 2 cut(s) | 1036, 1868 |
| SfaNI | GCATC | 6 cut(s) | 278, 1479, 1641, 1725, 2253, 2538 |
| SfcI | CTRYAG | 1 cut(s) | 2015 |
| Sfr303I | CCGCGG | 1 cut(s) | 1678 |
| SgrBI | CCGCGG | 1 cut(s) | 1678 |
| SinI | GGWCC | 2 cut(s) | 983, 1780 |
| SmlI | CTYRAG | 4 cut(s) | 632, 1598, 1774, 2084 |
| SmoI | CTYRAG | 4 cut(s) | 632, 1598, 1774, 2084 |
| SseBI | AGGCCT | 1 cut(s) | 1454 |
| SsiI | CCGC | 4 cut(s) | 690, 1675, 1677, 2677 |
| SspMI | CTAG | 3 cut(s) | 1400, 2276, 2561 |
| StuI | AGGCCT | 1 cut(s) | 1454 |
| StyD4I | CCNGG | 4 cut(s) | 323, 390, 2130, 2415 |
| StyI | CCWWGG | 2 cut(s) | 2049, 2484 |
| TaaI | ACNGT | 4 cut(s) | 880, 2286, 2501, 2571 |
| TaiI | ACGT | 3 cut(s) | 1168, 2266, 2551 |
| TaqI | TCGA | 6 cut(s) | 216, 1974, 2154, 2240, 2525, 2645 |
| TatI | WGTACW | 1 cut(s) | 132 |
| TauI | GCSGC | 1 cut(s) | 2680 |
| TfiI | GAWTC | 8 cut(s) | 320, 611, 841, 873, 1180, 1285, 2609, 2782 |
| TscAI | CASTG | 5 cut(s) | 883, 2191, 2437, 2476, 2504 |
| TseFI | GTSAC | 3 cut(s) | 853, 1370, 1409 |
| TseI | GCWGC | 3 cut(s) | 461, 476, 2014 |
| Tsp45I | GTSAC | 3 cut(s) | 853, 1370, 1409 |
| TspGWI | ACGGA | 4 cut(s) | 354, 1173, 1631, 1709 |
| TspRI | CASTG | 5 cut(s) | 883, 2191, 2437, 2476, 2504 |
| Vha464I | CTTAAG | 2 cut(s) | 632, 2084 |
| VpaK11BI | GGWCC | 2 cut(s) | 983, 1780 |
| XbaI | TCTAGA | 1 cut(s) | 2560 |
| XceI | RCATGY | 2 cut(s) | 1359, 1430 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 398 |
| XmiI | GTMKAC | 1 cut(s) | 2645 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2613 |
| XspI | CTAG | 3 cut(s) | 1400, 2276, 2561 |
| Zsp2I | ATGCAT | 2 cut(s) | 271, 1494 |