TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 1458, 1910, 3786, 3882 |
| Acc16I | TGCGCA | 1 cut(s) | 151 |
| AccB1I | GGYRCC | 1 cut(s) | 567 |
| AccI | GTMKAC | 2 cut(s) | 1420, 1736 |
| AccII | CGCG | 2 cut(s) | 300, 2939 |
| AciI | CCGC | 8 cut(s) | 288, 1609, 1963, 1988, 2053, 2903, 3339, 4134 |
| AcoI | YGGCCR | 1 cut(s) | 198 |
| AcuI | CTGAAG | 2 cut(s) | 1276, 2811 |
| AdeI | CACNNNGTG | 1 cut(s) | 268 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 468, 2219, 2429, 2779, 3338, 3819 |
| AflII | CTTAAG | 1 cut(s) | 2314 |
| AflIII | ACRYGT | 2 cut(s) | 3517, 3638 |
| AgeI | ACCGGT | 1 cut(s) | 248 |
| AhlI | ACTAGT | 1 cut(s) | 79 |
| AjnI | CCWGG | 5 cut(s) | 1256, 1389, 2172, 2382, 2491 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 314, 346 |
| Alw21I | GWGCWC | 3 cut(s) | 1165, 1290, 4035 |
| Alw26I | GTCTC | 4 cut(s) | 63, 2840, 3208, 4058 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2861 |
| Ama87I | CYCGRG | 1 cut(s) | 804 |
| AoxI | GGCC | 3 cut(s) | 198, 1254, 1375 |
| ApeKI | GCWGC | 9 cut(s) | 14, 668, 1185, 2049, 2706, 3057, 3472, 3574, 4122 |
| AseI | ATTAAT | 1 cut(s) | 2526 |
| AsiGI | ACCGGT | 1 cut(s) | 248 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 399, 486, 2796, 3993 |
| AspLEI | GCGC | 2 cut(s) | 152, 2878 |
| AspS9I | GGNCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| AsuC2I | CCSGG | 1 cut(s) | 1746 |
| AsuHPI | GGTGA | 5 cut(s) | 599, 1760, 2411, 3748, 3968 |
| AsuII | TTCGAA | 1 cut(s) | 3143 |
| AvaI | CYCGRG | 1 cut(s) | 804 |
| AvaII | GGWCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| BaeGI | GKGCMC | 2 cut(s) | 1811, 2756 |
| BalI | TGGCCA | 1 cut(s) | 200 |
| BamHI | GGATCC | 4 cut(s) | 550, 2075, 2222, 2432 |
| BanI | GGYRCC | 1 cut(s) | 567 |
| BanII | GRGCYC | 3 cut(s) | 1290, 1746, 4035 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1842, 1874 |
| BauI | CACGAG | 1 cut(s) | 1371 |
| BbsI | GAAGAC | 1 cut(s) | 896 |
| Bbv12I | GWGCWC | 3 cut(s) | 1165, 1290, 4035 |
| BbvI | GCAGC | 8 cut(s) | 680, 1197, 2061, 2718, 3044, 3459, 3561, 4109 |
| BceAI | ACGGC | 1 cut(s) | 97 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1942, 1976, 3049, 3083 |
| BciT130I | CCWGG | 5 cut(s) | 1258, 1391, 2174, 2384, 2493 |
| BciVI | GTATCC | 1 cut(s) | 286 |
| BclI | TGATCA | 2 cut(s) | 142, 3463 |
| BcnI | CCSGG | 1 cut(s) | 1746 |
| BcoDI | GTCTC | 4 cut(s) | 63, 2840, 3208, 4058 |
| BcuI | ACTAGT | 1 cut(s) | 79 |
| BfmI | CTRYAG | 2 cut(s) | 1737, 3058 |
| BfoI | RGCGCY | 1 cut(s) | 2879 |
| BfrI | CTTAAG | 1 cut(s) | 2314 |
| BfuI | GTATCC | 1 cut(s) | 286 |
| Bme1390I | CCNGG | 6 cut(s) | 1258, 1391, 1746, 2174, 2384, 2493 |
| Bme18I | GGWCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| BmeT110I | CYCGRG | 1 cut(s) | 804 |
| BmgT120I | GGNCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| BmiI | GGNNCC | 9 cut(s) | 37, 552, 569, 2077, 2224, 2336, 2434, 3345, 3695 |
| BmrFI | CCNGG | 6 cut(s) | 1258, 1391, 1746, 2174, 2384, 2493 |
| BoxI | GACNNNNGTC | 1 cut(s) | 24 |
| BpiI | GAAGAC | 1 cut(s) | 896 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1476, 1508 |
| BpmI | CTGGAG | 5 cut(s) | 2317, 2527, 2570, 3232, 3878 |
| Bpu14I | TTCGAA | 1 cut(s) | 3143 |
| BpuEI | CTTGAG | 1 cut(s) | 2617 |
| BpuMI | CCSGG | 1 cut(s) | 1746 |
| Bsa29I | ATCGAT | 1 cut(s) | 2893 |
| BsaAI | YACGTR | 2 cut(s) | 3639, 3964 |
| BsaBI | GATNNNNATC | 3 cut(s) | 366, 1049, 1947 |
| BsaI | GGTCTC | 1 cut(s) | 4058 |
| BsaJI | CCNNGG | 4 cut(s) | 29, 1257, 1389, 4048 |
| BsaWI | WCCGGW | 1 cut(s) | 248 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 978, 1008, 3205, 3235 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 468 |
| Bse118I | RCCGGY | 1 cut(s) | 248 |
| Bse3DI | GCAATG | 5 cut(s) | 107, 1545, 2624, 3623, 4128 |
| Bse8I | GATNNNNATC | 3 cut(s) | 366, 1049, 1947 |
| BseBI | CCWGG | 5 cut(s) | 1258, 1391, 2174, 2384, 2493 |
| BseCI | ATCGAT | 1 cut(s) | 2893 |
| BseDI | CCNNGG | 4 cut(s) | 29, 1257, 1389, 4048 |
| BseJI | GATNNNNATC | 3 cut(s) | 366, 1049, 1947 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 468, 2219, 2429, 2779, 3338, 3819 |
| BseMI | GCAATG | 5 cut(s) | 107, 1545, 2624, 3623, 4128 |
| BseMII | CTCAG | 5 cut(s) | 201, 266, 1856, 3311, 4161 |
| BseRI | GAGGAG | 2 cut(s) | 393, 981 |
| BseSI | GKGCMC | 2 cut(s) | 1811, 2756 |
| BseXI | GCAGC | 8 cut(s) | 680, 1197, 2061, 2718, 3044, 3459, 3561, 4109 |
| BsgI | GTGCAG | 7 cut(s) | 729, 2524, 2952, 3560, 3765, 4108, 4116 |
| Bsh1236I | CGCG | 2 cut(s) | 300, 2939 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1609 |
| BshFI | GGCC | 3 cut(s) | 200, 1256, 1377 |
| BshNI | GGYRCC | 1 cut(s) | 567 |
| BshTI | ACCGGT | 1 cut(s) | 248 |
| BshVI | ATCGAT | 1 cut(s) | 2893 |
| BsiEI | CGRYCG | 1 cut(s) | 1609 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1165, 1290, 4035 |
| BsiHKCI | CYCGRG | 1 cut(s) | 804 |
| BsiSI | CCGG | 3 cut(s) | 249, 1158, 1746 |
| BslFI | GGGAC | 5 cut(s) | 2129, 2926, 3443, 3795, 3812 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 468, 2219, 2429, 2779, 3338, 3819 |
| BsmAI | GTCTC | 4 cut(s) | 63, 2840, 3208, 4058 |
| BsmFI | GGGAC | 5 cut(s) | 2129, 2926, 3443, 3795, 3812 |
| BsmI | GAATGC | 1 cut(s) | 3014 |
| BsnI | GGCC | 3 cut(s) | 200, 1256, 1377 |
| Bso31I | GGTCTC | 1 cut(s) | 4058 |
| BsoBI | CYCGRG | 1 cut(s) | 804 |
| Bsp119I | TTCGAA | 1 cut(s) | 3143 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1165, 1290, 1746, 1811, 2756, 4035 |
| Bsp1407I | TGTACA | 2 cut(s) | 2189, 2604 |
| Bsp19I | CCATGG | 2 cut(s) | 29, 4048 |
| BspACI | CCGC | 8 cut(s) | 288, 1609, 1963, 1988, 2053, 2903, 3339, 4134 |
| BspANI | GGCC | 3 cut(s) | 200, 1256, 1377 |
| BspCNI | CTCAG | 5 cut(s) | 200, 267, 1857, 3310, 4162 |
| BspDI | ATCGAT | 1 cut(s) | 2893 |
| BspFNI | CGCG | 2 cut(s) | 300, 2939 |
| BspHI | TCATGA | 2 cut(s) | 1324, 3775 |
| BspLI | GGNNCC | 9 cut(s) | 37, 552, 569, 2077, 2224, 2336, 2434, 3345, 3695 |
| BspMAI | CTGCAG | 1 cut(s) | 3062 |
| BspQI | GCTCTTC | 2 cut(s) | 1295, 4023 |
| BspT104I | TTCGAA | 1 cut(s) | 3143 |
| BspT107I | GGYRCC | 1 cut(s) | 567 |
| BspTI | CTTAAG | 1 cut(s) | 2314 |
| BspTNI | GGTCTC | 1 cut(s) | 4058 |
| BsrDI | GCAATG | 5 cut(s) | 107, 1545, 2624, 3623, 4128 |
| BsrFI | RCCGGY | 1 cut(s) | 248 |
| BsrGI | TGTACA | 2 cut(s) | 2189, 2604 |
| BssAI | RCCGGY | 1 cut(s) | 248 |
| BssECI | CCNNGG | 4 cut(s) | 29, 1257, 1389, 4048 |
| BssSI | CACGAG | 1 cut(s) | 1371 |
| BssT1I | CCWWGG | 2 cut(s) | 29, 4048 |
| Bst2BI | CACGAG | 1 cut(s) | 1371 |
| Bst2UI | CCWGG | 5 cut(s) | 1258, 1391, 2174, 2384, 2493 |
| Bst6I | CTCTTC | 3 cut(s) | 235, 370, 729 |
| BstAFI | CTTAAG | 1 cut(s) | 2314 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1696, 2046, 3625 |
| BstAUI | TGTACA | 2 cut(s) | 2189, 2604 |
| BstBAI | YACGTR | 2 cut(s) | 3639, 3964 |
| BstBI | TTCGAA | 1 cut(s) | 3143 |
| BstC8I | GCNNGC | 4 cut(s) | 1440, 1688, 2042, 3984 |
| BstDSI | CCRYGG | 2 cut(s) | 29, 4048 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2217 |
| BstFNI | CGCG | 2 cut(s) | 300, 2939 |
| BstH2I | RGCGCY | 1 cut(s) | 2879 |
| BstHHI | GCGC | 2 cut(s) | 152, 2878 |
| BstMAI | GTCTC | 4 cut(s) | 63, 2840, 3208, 4058 |
| BstMCI | CGRYCG | 1 cut(s) | 1609 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1696, 1750, 2046, 3625, 4122 |
| BstNI | CCWGG | 5 cut(s) | 1258, 1391, 2174, 2384, 2493 |
| BstNSI | RCATGY | 5 cut(s) | 820, 1442, 1690, 2044, 3521 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 24 |
| BstSCI | CCNGG | 6 cut(s) | 1256, 1389, 1744, 2172, 2382, 2491 |
| BstSFI | CTRYAG | 2 cut(s) | 1737, 3058 |
| BstSLI | GKGCMC | 2 cut(s) | 1811, 2756 |
| BstSNI | TACGTA | 1 cut(s) | 3964 |
| BstUI | CGCG | 2 cut(s) | 300, 2939 |
| BstV1I | GCAGC | 8 cut(s) | 680, 1197, 2061, 2718, 3044, 3459, 3561, 4109 |
| BstV2I | GAAGAC | 1 cut(s) | 896 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 2086, 2530, 2906 |
| Bsu15I | ATCGAT | 1 cut(s) | 2893 |
| BsuI | GTATCC | 1 cut(s) | 286 |
| BsuRI | GGCC | 3 cut(s) | 200, 1256, 1377 |
| BsuTUI | ATCGAT | 1 cut(s) | 2893 |
| BtgI | CCRYGG | 2 cut(s) | 29, 4048 |
| BtsI | GCAGTG | 1 cut(s) | 943 |
| BtsIMutI | CAGTG | 4 cut(s) | 152, 943, 2610, 3766 |
| Cac8I | GCNNGC | 4 cut(s) | 1440, 1688, 2042, 3984 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2861 |
| CciI | TCATGA | 2 cut(s) | 1324, 3775 |
| CfoI | GCGC | 2 cut(s) | 152, 2878 |
| Cfr10I | RCCGGY | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| ClaI | ATCGAT | 1 cut(s) | 2893 |
| CseI | GACGC | 6 cut(s) | 1070, 1157, 1660, 2284, 2928, 3275 |
| CspAI | ACCGGT | 1 cut(s) | 248 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2763, 2798 |
| DraI | TTTAAA | 1 cut(s) | 2199 |
| DraIII | CACNNNGTG | 1 cut(s) | 268 |
| EaeI | YGGCCR | 1 cut(s) | 198 |
| Eam1104I | CTCTTC | 9 cut(s) | 235, 370, 729, 1295, 2568, 2842, 3281, 3923, 4023 |
| EarI | CTCTTC | 9 cut(s) | 235, 370, 729, 1295, 2568, 2842, 3281, 3923, 4023 |
| Ecl136II | GAGCTC | 2 cut(s) | 1288, 4033 |
| Eco105I | TACGTA | 1 cut(s) | 3964 |
| Eco130I | CCWWGG | 2 cut(s) | 29, 4048 |
| Eco24I | GRGCYC | 3 cut(s) | 1290, 1746, 4035 |
| Eco31I | GGTCTC | 1 cut(s) | 4058 |
| Eco32I | GATATC | 1 cut(s) | 2645 |
| Eco47I | GGWCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| Eco53kI | GAGCTC | 2 cut(s) | 1288, 4033 |
| Eco57I | CTGAAG | 2 cut(s) | 1276, 2811 |
| Eco88I | CYCGRG | 1 cut(s) | 804 |
| EcoICRI | GAGCTC | 2 cut(s) | 1288, 4033 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2217 |
| EcoRI | GAATTC | 1 cut(s) | 2864 |
| EcoRII | CCWGG | 5 cut(s) | 1256, 1389, 2172, 2382, 2491 |
| EcoRV | GATATC | 1 cut(s) | 2645 |
| EcoT14I | CCWWGG | 2 cut(s) | 29, 4048 |
| EcoT22I | ATGCAT | 6 cut(s) | 460, 1692, 3014, 3621, 3912, 4153 |
| EcoT38I | GRGCYC | 3 cut(s) | 1290, 1746, 4035 |
| ErhI | CCWWGG | 2 cut(s) | 29, 4048 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 804, 836 |
| FaqI | GGGAC | 5 cut(s) | 2129, 2926, 3443, 3795, 3812 |
| FauI | CCCGC | 3 cut(s) | 281, 2896, 3332 |
| FbaI | TGATCA | 2 cut(s) | 142, 3463 |
| FblI | GTMKAC | 2 cut(s) | 1420, 1736 |
| FriOI | GRGCYC | 3 cut(s) | 1290, 1746, 4035 |
| FspAI | RTGCGCAY | 1 cut(s) | 151 |
| FspI | TGCGCA | 1 cut(s) | 151 |
| GlaI | GCGC | 2 cut(s) | 151, 2877 |
| GsuI | CTGGAG | 5 cut(s) | 2317, 2527, 2570, 3232, 3878 |
| HaeII | RGCGCY | 1 cut(s) | 2879 |
| HaeIII | GGCC | 3 cut(s) | 200, 1256, 1377 |
| HapII | CCGG | 3 cut(s) | 249, 1158, 1746 |
| HgaI | GACGC | 6 cut(s) | 1070, 1157, 1660, 2284, 2928, 3275 |
| HhaI | GCGC | 2 cut(s) | 152, 2878 |
| Hin6I | GCGC | 2 cut(s) | 150, 2876 |
| HinP1I | GCGC | 2 cut(s) | 150, 2876 |
| HincII | GTYRAC | 4 cut(s) | 997, 2503, 3031, 4021 |
| HindII | GTYRAC | 4 cut(s) | 997, 2503, 3031, 4021 |
| HindIII | AAGCTT | 3 cut(s) | 7, 2234, 2444 |
| HpaI | GTTAAC | 1 cut(s) | 4021 |
| HpaII | CCGG | 3 cut(s) | 249, 1158, 1746 |
| HphI | GGTGA | 5 cut(s) | 599, 1760, 2411, 3748, 3968 |
| Hpy99I | CGWCG | 1 cut(s) | 3390 |
| HpyCH4IV | ACGT | 6 cut(s) | 561, 760, 2062, 2415, 3638, 3963 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1696, 1750, 2046, 3625, 4122 |
| HpySE526I | ACGT | 6 cut(s) | 561, 760, 2062, 2415, 3638, 3963 |
| HspAI | GCGC | 2 cut(s) | 150, 2876 |
| Ksp22I | TGATCA | 2 cut(s) | 142, 3463 |
| KspAI | GTTAAC | 1 cut(s) | 4021 |
| LguI | GCTCTTC | 2 cut(s) | 1295, 4023 |
| LmnI | GCTCC | 3 cut(s) | 1160, 2340, 3163 |
| Lsp1109I | GCAGC | 8 cut(s) | 680, 1197, 2061, 2718, 3044, 3459, 3561, 4109 |
| MaeII | ACGT | 6 cut(s) | 561, 760, 2062, 2415, 3638, 3963 |
| MaeIII | GTNAC | 4 cut(s) | 941, 2272, 2764, 2831 |
| MfeI | CAATTG | 3 cut(s) | 206, 897, 921 |
| MhlI | GDGCHC | 6 cut(s) | 1165, 1290, 1746, 1811, 2756, 4035 |
| MlsI | TGGCCA | 1 cut(s) | 200 |
| MluNI | TGGCCA | 1 cut(s) | 200 |
| MmeI | TCCRAC | 3 cut(s) | 1547, 2410, 2825 |
| Mox20I | TGGCCA | 1 cut(s) | 200 |
| Mph1103I | ATGCAT | 6 cut(s) | 460, 1692, 3014, 3621, 3912, 4153 |
| MroXI | GAANNNNTTC | 4 cut(s) | 399, 486, 2796, 3993 |
| MscI | TGGCCA | 1 cut(s) | 200 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1411, 1413, 1776, 2904, 3507, 4062, 4064 |
| Msp20I | TGGCCA | 1 cut(s) | 200 |
| MspA1I | CMGCKG | 2 cut(s) | 3360, 3982 |
| MspCI | CTTAAG | 1 cut(s) | 2314 |
| MspI | CCGG | 3 cut(s) | 249, 1158, 1746 |
| MspR9I | CCNGG | 6 cut(s) | 1258, 1391, 1746, 2174, 2384, 2493 |
| MunI | CAATTG | 3 cut(s) | 206, 897, 921 |
| Mva1269I | GAATGC | 1 cut(s) | 3014 |
| MvaI | CCWGG | 5 cut(s) | 1258, 1391, 2174, 2384, 2493 |
| MvnI | CGCG | 2 cut(s) | 300, 2939 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1696, 1750, 2046, 3625, 4122 |
| NciI | CCSGG | 1 cut(s) | 1746 |
| NcoI | CCATGG | 2 cut(s) | 29, 4048 |
| NlaIV | GGNNCC | 9 cut(s) | 37, 552, 569, 2077, 2224, 2336, 2434, 3345, 3695 |
| NmuCI | GTSAC | 3 cut(s) | 941, 2272, 2831 |
| NsbI | TGCGCA | 1 cut(s) | 151 |
| NsiI | ATGCAT | 6 cut(s) | 460, 1692, 3014, 3621, 3912, 4153 |
| NspI | RCATGY | 5 cut(s) | 820, 1442, 1690, 2044, 3521 |
| NspV | TTCGAA | 1 cut(s) | 3143 |
| PaeI | GCATGC | 3 cut(s) | 1442, 1690, 2044 |
| PagI | TCATGA | 2 cut(s) | 1324, 3775 |
| PciI | ACATGT | 1 cut(s) | 3517 |
| PciSI | GCTCTTC | 2 cut(s) | 1295, 4023 |
| PctI | GAATGC | 1 cut(s) | 3014 |
| PdmI | GAANNNNTTC | 4 cut(s) | 399, 486, 2796, 3993 |
| PflFI | GACNNNGTC | 1 cut(s) | 3219 |
| PfoI | TCCNGGA | 2 cut(s) | 2172, 2382 |
| PinAI | ACCGGT | 1 cut(s) | 248 |
| Ppu21I | YACGTR | 2 cut(s) | 3639, 3964 |
| PscI | ACATGT | 1 cut(s) | 3517 |
| PshAI | GACNNNNGTC | 1 cut(s) | 24 |
| PshBI | ATTAAT | 1 cut(s) | 2526 |
| PsiI | TTATAA | 4 cut(s) | 1458, 1910, 3786, 3882 |
| Psp124BI | GAGCTC | 2 cut(s) | 1290, 4035 |
| Psp6I | CCWGG | 5 cut(s) | 1256, 1389, 2172, 2382, 2491 |
| PspGI | CCWGG | 5 cut(s) | 1256, 1389, 2172, 2382, 2491 |
| PspN4I | GGNNCC | 9 cut(s) | 37, 552, 569, 2077, 2224, 2336, 2434, 3345, 3695 |
| PspPI | GGNCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| PstI | CTGCAG | 1 cut(s) | 3062 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2861 |
| PsyI | GACNNNGTC | 1 cut(s) | 3219 |
| PvuII | CAGCTG | 2 cut(s) | 3360, 3982 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1411, 1413, 1776, 2904, 3507, 4062, 4064 |
| SacI | GAGCTC | 2 cut(s) | 1290, 4035 |
| SapI | GCTCTTC | 2 cut(s) | 1295, 4023 |
| Sau96I | GGNCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| ScrFI | CCNGG | 6 cut(s) | 1258, 1391, 1746, 2174, 2384, 2493 |
| SduI | GDGCHC | 6 cut(s) | 1165, 1290, 1746, 1811, 2756, 4035 |
| SfcI | CTRYAG | 2 cut(s) | 1737, 3058 |
| SfuI | TTCGAA | 1 cut(s) | 3143 |
| SinI | GGWCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1411, 1413, 1776, 2904, 3507, 4062, 4064 |
| SmlI | CTYRAG | 2 cut(s) | 2314, 2596 |
| SmoI | CTYRAG | 2 cut(s) | 2314, 2596 |
| SnaBI | TACGTA | 1 cut(s) | 3964 |
| SpeI | ACTAGT | 1 cut(s) | 79 |
| SphI | GCATGC | 3 cut(s) | 1442, 1690, 2044 |
| SsiI | CCGC | 8 cut(s) | 288, 1609, 1963, 1988, 2053, 2903, 3339, 4134 |
| SspI | AATATT | 2 cut(s) | 1593, 2926 |
| SstI | GAGCTC | 2 cut(s) | 1290, 4035 |
| StyD4I | CCNGG | 6 cut(s) | 1256, 1389, 1744, 2172, 2382, 2491 |
| StyI | CCWWGG | 2 cut(s) | 29, 4048 |
| TaiI | ACGT | 6 cut(s) | 564, 763, 2065, 2418, 3641, 3966 |
| TaqI | TCGA | 9 cut(s) | 1483, 1542, 2216, 2893, 3143, 3283, 3385, 3560, 3643 |
| TatI | WGTACW | 4 cut(s) | 2131, 2189, 2604, 3514 |
| TauI | GCSGC | 2 cut(s) | 2055, 4136 |
| TscAI | CASTG | 4 cut(s) | 152, 950, 2617, 3766 |
| TseFI | GTSAC | 3 cut(s) | 941, 2272, 2831 |
| TseI | GCWGC | 9 cut(s) | 14, 668, 1185, 2049, 2706, 3057, 3472, 3574, 4122 |
| Tsp45I | GTSAC | 3 cut(s) | 941, 2272, 2831 |
| TspGWI | ACGGA | 3 cut(s) | 1371, 2481, 3731 |
| TspRI | CASTG | 4 cut(s) | 152, 950, 2617, 3766 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3219 |
| Vha464I | CTTAAG | 1 cut(s) | 2314 |
| VpaK11BI | GGWCC | 4 cut(s) | 36, 1138, 3493, 3694 |
| VspI | ATTAAT | 1 cut(s) | 2526 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2217 |
| XbaI | TCTAGA | 1 cut(s) | 2728 |
| XceI | RCATGY | 5 cut(s) | 820, 1442, 1690, 2044, 3521 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 472, 772, 3099 |
| XmiI | GTMKAC | 2 cut(s) | 1420, 1736 |
| XmnI | GAANNNNTTC | 4 cut(s) | 399, 486, 2796, 3993 |
| Zsp2I | ATGCAT | 6 cut(s) | 460, 1692, 3014, 3621, 3912, 4153 |