TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 16 - 184 | 6.3e-50 | TIR domain |
| TIR_2 | PF13676 | 19 - 114 | 2.8e-15 | TIR domain |
| WHD_ROQ1 | PF23282 | 369 - 437 | 3.3e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 576 - 678 | 2e-11 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 621 - 699 | 7.6e-15 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 678 - 723 | 1.4e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 713 - 796 | 7.7e-14 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 750 - 936 | 1.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_4 | PF12799 | 866 - 908 | 5.9e-06 | Leucine Rich repeats (2 copies) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 548 |
| Acc36I | ACCTGC | 3 cut(s) | 1201, 1326, 3581 |
| Acc65I | GGTACC | 1 cut(s) | 1451 |
| AccB1I | GGYRCC | 2 cut(s) | 1451, 2391 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1862 |
| AccBSI | CCGCTC | 1 cut(s) | 2427 |
| AccII | CGCG | 2 cut(s) | 2033, 3335 |
| AciI | CCGC | 5 cut(s) | 37, 85, 455, 2339, 2427 |
| AclWI | GGATC | 5 cut(s) | 274, 604, 2492, 3315, 3411 |
| AcoI | YGGCCR | 3 cut(s) | 317, 570, 840 |
| AcuI | CTGAAG | 3 cut(s) | 255, 1443, 3107 |
| AfaI | GTAC | 5 cut(s) | 556, 578, 930, 1453, 2939 |
| AfeI | AGCGCT | 1 cut(s) | 186 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 255, 917, 1862, 2401, 2526, 3347 |
| AflIII | ACRYGT | 2 cut(s) | 1432, 2031 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2881 |
| AjiI | CACGTC | 1 cut(s) | 568 |
| AjnI | CCWGG | 6 cut(s) | 1244, 1321, 2387, 2745, 2812, 3384 |
| AleI | CACNNNNGTG | 1 cut(s) | 3023 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 627, 659 |
| Alw21I | GWGCWC | 2 cut(s) | 1218, 1797 |
| Alw26I | GTCTC | 4 cut(s) | 1576, 1700, 2642, 2700 |
| Alw44I | GTGCAC | 1 cut(s) | 1793 |
| AlwI | GGATC | 5 cut(s) | 274, 604, 2492, 3315, 3411 |
| Ama87I | CYCGRG | 2 cut(s) | 597, 875 |
| Aor51HI | AGCGCT | 1 cut(s) | 186 |
| AoxI | GGCC | 5 cut(s) | 100, 317, 473, 570, 840 |
| ApaLI | GTGCAC | 1 cut(s) | 1793 |
| ApeKI | GCWGC | 6 cut(s) | 440, 1028, 2359, 3485, 3600, 3665 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2454 |
| Asp718I | GGTACC | 1 cut(s) | 1451 |
| AspA2I | CCTAGG | 1 cut(s) | 3077 |
| AspLEI | GCGC | 2 cut(s) | 187, 1506 |
| AspS9I | GGNCC | 3 cut(s) | 424, 908, 3379 |
| AsuC2I | CCSGG | 2 cut(s) | 2975, 3523 |
| AsuHPI | GGTGA | 7 cut(s) | 86, 1154, 1453, 2416, 2434, 3020, 3428 |
| AsuNHI | GCTAGC | 1 cut(s) | 365 |
| AvaI | CYCGRG | 2 cut(s) | 597, 875 |
| AvaII | GGWCC | 3 cut(s) | 424, 908, 3379 |
| AvrII | CCTAGG | 1 cut(s) | 3077 |
| AxyI | CCTNAGG | 1 cut(s) | 3343 |
| BaeGI | GKGCMC | 2 cut(s) | 1797, 2396 |
| BalI | TGGCCA | 3 cut(s) | 319, 572, 842 |
| BanI | GGYRCC | 2 cut(s) | 1451, 2391 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1017, 1049 |
| BauI | CACGAG | 1 cut(s) | 3429 |
| BbsI | GAAGAC | 3 cut(s) | 956, 3426, 3639 |
| Bbv12I | GWGCWC | 2 cut(s) | 1218, 1797 |
| BbvI | GCAGC | 6 cut(s) | 452, 1015, 2346, 3497, 3587, 3677 |
| BciT130I | CCWGG | 6 cut(s) | 1246, 1323, 2389, 2747, 2814, 3386 |
| BclI | TGATCA | 3 cut(s) | 3253, 3457, 3538 |
| BcnI | CCSGG | 2 cut(s) | 2975, 3523 |
| BcoDI | GTCTC | 4 cut(s) | 1576, 1700, 2642, 2700 |
| BfaI | CTAG | 8 cut(s) | 366, 696, 777, 1172, 1698, 2378, 3078, 3296 |
| BfmI | CTRYAG | 1 cut(s) | 3489 |
| BfoI | RGCGCY | 2 cut(s) | 188, 1507 |
| BfuAI | ACCTGC | 3 cut(s) | 1201, 1326, 3581 |
| BglII | AGATCT | 1 cut(s) | 1609 |
| BisI | GCNGC | 9 cut(s) | 37, 441, 456, 1029, 2339, 2360, 3486, 3601, 3666 |
| BlnI | CCTAGG | 1 cut(s) | 3077 |
| BlsI | GCNGC | 9 cut(s) | 38, 442, 457, 1030, 2340, 2361, 3487, 3602, 3667 |
| Bme1390I | CCNGG | 8 cut(s) | 1246, 1323, 2389, 2747, 2814, 2975, 3386, 3523 |
| Bme18I | GGWCC | 3 cut(s) | 424, 908, 3379 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2881 |
| BmeT110I | CYCGRG | 2 cut(s) | 597, 875 |
| BmgBI | CACGTC | 1 cut(s) | 568 |
| BmgT120I | GGNCC | 3 cut(s) | 424, 908, 3379 |
| BmiI | GGNNCC | 6 cut(s) | 909, 1453, 2393, 2623, 3380, 3573 |
| BmrFI | CCNGG | 8 cut(s) | 1246, 1323, 2389, 2747, 2814, 2975, 3386, 3523 |
| BmrI | ACTGGG | 1 cut(s) | 575 |
| BmtI | GCTAGC | 1 cut(s) | 369 |
| BmuI | ACTGGG | 1 cut(s) | 575 |
| BpiI | GAAGAC | 3 cut(s) | 956, 3426, 3639 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 479, 511, 1053, 1085 |
| BpmI | CTGGAG | 3 cut(s) | 1605, 1724, 2796 |
| BpuEI | CTTGAG | 3 cut(s) | 942, 1793, 3599 |
| BpuMI | CCSGG | 2 cut(s) | 2975, 3523 |
| Bsa29I | ATCGAT | 2 cut(s) | 1736, 1997 |
| BsaAI | YACGTR | 1 cut(s) | 2941 |
| BsaBI | GATNNNNATC | 4 cut(s) | 218, 2197, 3071, 3540 |
| BsaJI | CCNNGG | 8 cut(s) | 41, 596, 1245, 1321, 2016, 2223, 3077, 3522 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 255, 917, 1862, 2401, 2526, 3347 |
| Bse118I | RCCGGY | 1 cut(s) | 2924 |
| Bse1I | ACTGG | 7 cut(s) | 320, 504, 581, 2031, 2625, 2799, 2859 |
| Bse21I | CCTNAGG | 1 cut(s) | 3343 |
| Bse3DI | GCAATG | 3 cut(s) | 490, 1122, 3675 |
| Bse8I | GATNNNNATC | 4 cut(s) | 218, 2197, 3071, 3540 |
| BseBI | CCWGG | 6 cut(s) | 1246, 1323, 2389, 2747, 2814, 3386 |
| BseCI | ATCGAT | 2 cut(s) | 1736, 1997 |
| BseDI | CCNNGG | 8 cut(s) | 41, 596, 1245, 1321, 2016, 2223, 3077, 3522 |
| BseJI | GATNNNNATC | 4 cut(s) | 218, 2197, 3071, 3540 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 255, 917, 1862, 2401, 2526, 3347 |
| BseMI | GCAATG | 3 cut(s) | 490, 1122, 3675 |
| BseMII | CTCAG | 3 cut(s) | 1587, 3084, 3357 |
| BseNI | ACTGG | 7 cut(s) | 320, 504, 581, 2031, 2625, 2799, 2859 |
| BseRI | GAGGAG | 1 cut(s) | 180 |
| BseSI | GKGCMC | 2 cut(s) | 1797, 2396 |
| BseXI | GCAGC | 6 cut(s) | 452, 1015, 2346, 3497, 3587, 3677 |
| BseYI | CCCAGC | 3 cut(s) | 1499, 2520, 2641 |
| BsgI | GTGCAG | 5 cut(s) | 130, 1433, 1835, 2466, 3586 |
| Bsh1236I | CGCG | 2 cut(s) | 2033, 3335 |
| BshFI | GGCC | 5 cut(s) | 102, 319, 475, 572, 842 |
| BshNI | GGYRCC | 2 cut(s) | 1451, 2391 |
| BshVI | ATCGAT | 2 cut(s) | 1736, 1997 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1218, 1797 |
| BsiHKCI | CYCGRG | 2 cut(s) | 597, 875 |
| BsiSI | CCGG | 4 cut(s) | 1313, 2925, 2975, 3522 |
| BslFI | GGGAC | 2 cut(s) | 921, 1574 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 255, 917, 1862, 2401, 2526, 3347 |
| BsmAI | GTCTC | 4 cut(s) | 1576, 1700, 2642, 2700 |
| BsmFI | GGGAC | 2 cut(s) | 921, 1574 |
| BsmI | GAATGC | 2 cut(s) | 401, 1642 |
| BsnI | GGCC | 5 cut(s) | 102, 319, 475, 572, 842 |
| BsoBI | CYCGRG | 2 cut(s) | 597, 875 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1218, 1797, 2396 |
| BspACI | CCGC | 5 cut(s) | 37, 85, 455, 2339, 2427 |
| BspANI | GGCC | 5 cut(s) | 102, 319, 475, 572, 842 |
| BspCNI | CTCAG | 3 cut(s) | 1586, 3085, 3356 |
| BspDI | ATCGAT | 2 cut(s) | 1736, 1997 |
| BspFNI | CGCG | 2 cut(s) | 2033, 3335 |
| BspHI | TCATGA | 7 cut(s) | 391, 514, 865, 1348, 3199, 3250, 3544 |
| BspLI | GGNNCC | 6 cut(s) | 909, 1453, 2393, 2623, 3380, 3573 |
| BspMI | ACCTGC | 3 cut(s) | 1201, 1326, 3581 |
| BspOI | GCTAGC | 1 cut(s) | 369 |
| BspPI | GGATC | 5 cut(s) | 274, 604, 2492, 3315, 3411 |
| BspT107I | GGYRCC | 2 cut(s) | 1451, 2391 |
| BsrBI | CCGCTC | 1 cut(s) | 2427 |
| BsrDI | GCAATG | 3 cut(s) | 490, 1122, 3675 |
| BsrFI | RCCGGY | 1 cut(s) | 2924 |
| BsrI | ACTGG | 7 cut(s) | 320, 504, 581, 2031, 2625, 2799, 2859 |
| BssAI | RCCGGY | 1 cut(s) | 2924 |
| BssECI | CCNNGG | 8 cut(s) | 41, 596, 1245, 1321, 2016, 2223, 3077, 3522 |
| BssSI | CACGAG | 1 cut(s) | 3429 |
| BssT1I | CCWWGG | 3 cut(s) | 2016, 2223, 3077 |
| Bst2BI | CACGAG | 1 cut(s) | 3429 |
| Bst2UI | CCWGG | 6 cut(s) | 1246, 1323, 2389, 2747, 2814, 3386 |
| Bst6I | CTCTTC | 5 cut(s) | 157, 198, 522, 631, 2460 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1270 |
| BstBAI | YACGTR | 1 cut(s) | 2941 |
| BstC8I | GCNNGC | 4 cut(s) | 367, 2647, 2922, 2926 |
| BstDSI | CCRYGG | 1 cut(s) | 41 |
| BstFNI | CGCG | 2 cut(s) | 2033, 3335 |
| BstH2I | RGCGCY | 2 cut(s) | 188, 1507 |
| BstHHI | GCGC | 2 cut(s) | 187, 1506 |
| BstMAI | GTCTC | 4 cut(s) | 1576, 1700, 2642, 2700 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 108, 1202, 1270, 3473, 3482, 3491 |
| BstNI | CCWGG | 6 cut(s) | 1246, 1323, 2389, 2747, 2814, 3386 |
| BstNSI | RCATGY | 5 cut(s) | 1131, 1436, 1471, 2649, 2924 |
| BstSCI | CCNGG | 8 cut(s) | 1244, 1321, 2387, 2745, 2812, 2973, 3384, 3521 |
| BstSFI | CTRYAG | 1 cut(s) | 3489 |
| BstSLI | GKGCMC | 2 cut(s) | 1797, 2396 |
| BstUI | CGCG | 2 cut(s) | 2033, 3335 |
| BstV1I | GCAGC | 6 cut(s) | 452, 1015, 2346, 3497, 3587, 3677 |
| BstV2I | GAAGAC | 3 cut(s) | 956, 3426, 3639 |
| BstX2I | RGATCY | 3 cut(s) | 279, 609, 1609 |
| BstYI | RGATCY | 3 cut(s) | 279, 609, 1609 |
| Bsu15I | ATCGAT | 2 cut(s) | 1736, 1997 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3343 |
| BsuRI | GGCC | 5 cut(s) | 102, 319, 475, 572, 842 |
| BsuTUI | ATCGAT | 2 cut(s) | 1736, 1997 |
| BtgI | CCRYGG | 1 cut(s) | 41 |
| BtrI | CACGTC | 1 cut(s) | 568 |
| BtsIMutI | CAGTG | 3 cut(s) | 511, 1098, 2350 |
| BveI | ACCTGC | 3 cut(s) | 1201, 1326, 3581 |
| Cac8I | GCNNGC | 4 cut(s) | 367, 2647, 2922, 2926 |
| CciI | TCATGA | 7 cut(s) | 391, 514, 865, 1348, 3199, 3250, 3544 |
| CfoI | GCGC | 2 cut(s) | 187, 1506 |
| Cfr10I | RCCGGY | 1 cut(s) | 2924 |
| Cfr13I | GGNCC | 3 cut(s) | 424, 908, 3379 |
| ClaI | ATCGAT | 2 cut(s) | 1736, 1997 |
| CseI | GACGC | 6 cut(s) | 110, 2022, 2039, 2108, 2246, 3482 |
| Csp6I | GTAC | 5 cut(s) | 555, 577, 929, 1452, 2938 |
| CviQI | GTAC | 5 cut(s) | 555, 577, 929, 1452, 2938 |
| DraI | TTTAAA | 2 cut(s) | 901, 2157 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2881 |
| EaeI | YGGCCR | 3 cut(s) | 317, 570, 840 |
| Eam1104I | CTCTTC | 5 cut(s) | 157, 198, 522, 631, 2460 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2881 |
| EarI | CTCTTC | 5 cut(s) | 157, 198, 522, 631, 2460 |
| Eco130I | CCWWGG | 3 cut(s) | 2016, 2223, 3077 |
| Eco32I | GATATC | 1 cut(s) | 2006 |
| Eco47I | GGWCC | 3 cut(s) | 424, 908, 3379 |
| Eco47III | AGCGCT | 1 cut(s) | 186 |
| Eco57I | CTGAAG | 3 cut(s) | 255, 1443, 3107 |
| Eco81I | CCTNAGG | 1 cut(s) | 3343 |
| Eco88I | CYCGRG | 2 cut(s) | 597, 875 |
| EcoRII | CCWGG | 6 cut(s) | 1244, 1321, 2387, 2745, 2812, 3384 |
| EcoRV | GATATC | 1 cut(s) | 2006 |
| EcoT14I | CCWWGG | 3 cut(s) | 2016, 2223, 3077 |
| EcoT22I | ATGCAT | 4 cut(s) | 247, 1266, 1862, 2651 |
| ErhI | CCWWGG | 3 cut(s) | 2016, 2223, 3077 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 245, 277 |
| FaqI | GGGAC | 2 cut(s) | 921, 1574 |
| FauI | CCCGC | 1 cut(s) | 92 |
| FauNDI | CATATG | 1 cut(s) | 648 |
| FbaI | TGATCA | 3 cut(s) | 3253, 3457, 3538 |
| Fnu4HI | GCNGC | 9 cut(s) | 37, 441, 456, 1029, 2339, 2360, 3486, 3601, 3666 |
| Fsp4HI | GCNGC | 9 cut(s) | 37, 441, 456, 1029, 2339, 2360, 3486, 3601, 3666 |
| FspBI | CTAG | 8 cut(s) | 366, 696, 777, 1172, 1698, 2378, 3078, 3296 |
| GlaI | GCGC | 2 cut(s) | 186, 1505 |
| GluI | GCNGC | 9 cut(s) | 37, 441, 456, 1029, 2339, 2360, 3486, 3601, 3666 |
| GsaI | CCCAGC | 3 cut(s) | 1503, 2524, 2645 |
| GsuI | CTGGAG | 3 cut(s) | 1605, 1724, 2796 |
| HaeII | RGCGCY | 2 cut(s) | 188, 1507 |
| HaeIII | GGCC | 5 cut(s) | 102, 319, 475, 572, 842 |
| HapII | CCGG | 4 cut(s) | 1313, 2925, 2975, 3522 |
| HgaI | GACGC | 6 cut(s) | 110, 2022, 2039, 2108, 2246, 3482 |
| HhaI | GCGC | 2 cut(s) | 187, 1506 |
| Hin6I | GCGC | 2 cut(s) | 185, 1504 |
| HinP1I | GCGC | 2 cut(s) | 185, 1504 |
| HincII | GTYRAC | 1 cut(s) | 3675 |
| HindII | GTYRAC | 1 cut(s) | 3675 |
| HindIII | AAGCTT | 2 cut(s) | 617, 1176 |
| HpaI | GTTAAC | 1 cut(s) | 3675 |
| HpaII | CCGG | 4 cut(s) | 1313, 2925, 2975, 3522 |
| HphI | GGTGA | 7 cut(s) | 86, 1154, 1453, 2416, 2434, 3020, 3428 |
| Hpy166II | GTNNAC | 7 cut(s) | 1360, 1795, 2350, 2595, 3016, 3382, 3675 |
| Hpy8I | GTNNAC | 7 cut(s) | 1360, 1795, 2350, 2595, 3016, 3382, 3675 |
| HpyCH4IV | ACGT | 4 cut(s) | 567, 940, 1330, 2940 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 108, 1202, 1270, 3473, 3482, 3491 |
| HpySE526I | ACGT | 4 cut(s) | 567, 940, 1330, 2940 |
| HspAI | GCGC | 2 cut(s) | 185, 1504 |
| KpnI | GGTACC | 1 cut(s) | 1455 |
| KroI | GCCGGC | 1 cut(s) | 2924 |
| KroNI | GCCGGC | 1 cut(s) | 2926 |
| Ksp22I | TGATCA | 3 cut(s) | 3253, 3457, 3538 |
| KspAI | GTTAAC | 1 cut(s) | 3675 |
| LmnI | GCTCC | 2 cut(s) | 3292, 3366 |
| Lsp1109I | GCAGC | 6 cut(s) | 452, 1015, 2346, 3497, 3587, 3677 |
| MaeI | CTAG | 8 cut(s) | 366, 696, 777, 1172, 1698, 2378, 3078, 3296 |
| MaeII | ACGT | 4 cut(s) | 567, 940, 1330, 2940 |
| MaeIII | GTNAC | 2 cut(s) | 2404, 3169 |
| MbiI | CCGCTC | 1 cut(s) | 2427 |
| MfeI | CAATTG | 6 cut(s) | 690, 714, 2067, 2136, 2205, 2274 |
| MflI | RGATCY | 3 cut(s) | 279, 609, 1609 |
| MhlI | GDGCHC | 3 cut(s) | 1218, 1797, 2396 |
| MlsI | TGGCCA | 3 cut(s) | 319, 572, 842 |
| MluI | ACGCGT | 1 cut(s) | 2031 |
| MluNI | TGGCCA | 3 cut(s) | 319, 572, 842 |
| MlyI | GAGTC | 6 cut(s) | 215, 1596, 1814, 2600, 3248, 3331 |
| MmeI | TCCRAC | 5 cut(s) | 894, 1633, 1709, 2745, 3641 |
| Mox20I | TGGCCA | 3 cut(s) | 319, 572, 842 |
| Mph1103I | ATGCAT | 4 cut(s) | 247, 1266, 1862, 2651 |
| MroNI | GCCGGC | 1 cut(s) | 2924 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2454 |
| MscI | TGGCCA | 3 cut(s) | 319, 572, 842 |
| Msp20I | TGGCCA | 3 cut(s) | 319, 572, 842 |
| MspA1I | CMGCKG | 2 cut(s) | 2914, 3488 |
| MspI | CCGG | 4 cut(s) | 1313, 2925, 2975, 3522 |
| MspR9I | CCNGG | 8 cut(s) | 1246, 1323, 2389, 2747, 2814, 2975, 3386, 3523 |
| MunI | CAATTG | 6 cut(s) | 690, 714, 2067, 2136, 2205, 2274 |
| Mva1269I | GAATGC | 2 cut(s) | 401, 1642 |
| MvaI | CCWGG | 6 cut(s) | 1246, 1323, 2389, 2747, 2814, 3386 |
| MvnI | CGCG | 2 cut(s) | 2033, 3335 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 108, 1202, 1270, 3473, 3482, 3491 |
| NaeI | GCCGGC | 1 cut(s) | 2926 |
| NciI | CCSGG | 2 cut(s) | 2975, 3523 |
| NdeI | CATATG | 1 cut(s) | 648 |
| NgoMIV | GCCGGC | 1 cut(s) | 2924 |
| NheI | GCTAGC | 1 cut(s) | 365 |
| NlaIV | GGNNCC | 6 cut(s) | 909, 1453, 2393, 2623, 3380, 3573 |
| NmuCI | GTSAC | 2 cut(s) | 2404, 3169 |
| NsiI | ATGCAT | 4 cut(s) | 247, 1266, 1862, 2651 |
| NspI | RCATGY | 5 cut(s) | 1131, 1436, 1471, 2649, 2924 |
| OliI | CACNNNNGTG | 1 cut(s) | 3023 |
| PaeI | GCATGC | 2 cut(s) | 2649, 2924 |
| PaeR7I | CTCGAG | 1 cut(s) | 875 |
| PagI | TCATGA | 7 cut(s) | 391, 514, 865, 1348, 3199, 3250, 3544 |
| PciI | ACATGT | 1 cut(s) | 1432 |
| PctI | GAATGC | 2 cut(s) | 401, 1642 |
| PdiI | GCCGGC | 1 cut(s) | 2926 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2454 |
| PflFI | GACNNNGTC | 1 cut(s) | 3238 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1862 |
| PfoI | TCCNGGA | 3 cut(s) | 2745, 2812, 2973 |
| PkrI | GCNGC | 9 cut(s) | 38, 442, 457, 1030, 2340, 2361, 3487, 3602, 3667 |
| PleI | GAGTC | 6 cut(s) | 214, 1595, 1813, 2599, 3247, 3331 |
| PpsI | GAGTC | 6 cut(s) | 214, 1595, 1813, 2599, 3247, 3331 |
| Ppu21I | YACGTR | 1 cut(s) | 2941 |
| PscI | ACATGT | 1 cut(s) | 1432 |
| PsiI | TTATAA | 1 cut(s) | 548 |
| Psp6I | CCWGG | 6 cut(s) | 1244, 1321, 2387, 2745, 2812, 3384 |
| PspFI | CCCAGC | 3 cut(s) | 1499, 2520, 2641 |
| PspGI | CCWGG | 6 cut(s) | 1244, 1321, 2387, 2745, 2812, 3384 |
| PspN4I | GGNNCC | 6 cut(s) | 909, 1453, 2393, 2623, 3380, 3573 |
| PspPI | GGNCC | 3 cut(s) | 424, 908, 3379 |
| PsuI | RGATCY | 3 cut(s) | 279, 609, 1609 |
| PsyI | GACNNNGTC | 1 cut(s) | 3238 |
| PvuII | CAGCTG | 2 cut(s) | 2914, 3488 |
| RsaI | GTAC | 5 cut(s) | 556, 578, 930, 1453, 2939 |
| RsaNI | GTAC | 5 cut(s) | 555, 577, 929, 1452, 2938 |
| SatI | GCNGC | 9 cut(s) | 37, 441, 456, 1029, 2339, 2360, 3486, 3601, 3666 |
| Sau96I | GGNCC | 3 cut(s) | 424, 908, 3379 |
| SchI | GAGTC | 6 cut(s) | 215, 1596, 1814, 2600, 3248, 3331 |
| ScrFI | CCNGG | 8 cut(s) | 1246, 1323, 2389, 2747, 2814, 2975, 3386, 3523 |
| SduI | GDGCHC | 3 cut(s) | 1218, 1797, 2396 |
| SfcI | CTRYAG | 1 cut(s) | 3489 |
| Sfr274I | CTCGAG | 1 cut(s) | 875 |
| SinI | GGWCC | 3 cut(s) | 424, 908, 3379 |
| SlaI | CTCGAG | 1 cut(s) | 875 |
| SmlI | CTYRAG | 4 cut(s) | 875, 957, 1772, 3578 |
| SmoI | CTYRAG | 4 cut(s) | 875, 957, 1772, 3578 |
| SphI | GCATGC | 2 cut(s) | 2649, 2924 |
| SsiI | CCGC | 5 cut(s) | 37, 85, 455, 2339, 2427 |
| SspI | AATATT | 2 cut(s) | 1381, 1789 |
| SspMI | CTAG | 8 cut(s) | 366, 696, 777, 1172, 1698, 2378, 3078, 3296 |
| StyD4I | CCNGG | 8 cut(s) | 1244, 1321, 2387, 2745, 2812, 2973, 3384, 3521 |
| StyI | CCWWGG | 3 cut(s) | 2016, 2223, 3077 |
| TaiI | ACGT | 4 cut(s) | 570, 943, 1333, 2943 |
| TatI | WGTACW | 2 cut(s) | 554, 928 |
| TauI | GCSGC | 3 cut(s) | 39, 458, 2341 |
| TscAI | CASTG | 3 cut(s) | 511, 1105, 2350 |
| TseFI | GTSAC | 2 cut(s) | 2404, 3169 |
| TseI | GCWGC | 6 cut(s) | 440, 1028, 2359, 3485, 3600, 3665 |
| Tsp45I | GTSAC | 2 cut(s) | 2404, 3169 |
| TspGWI | ACGGA | 3 cut(s) | 58, 1733, 2367 |
| TspRI | CASTG | 3 cut(s) | 511, 1105, 2350 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3238 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1862 |
| VneI | GTGCAC | 1 cut(s) | 1793 |
| VpaK11BI | GGWCC | 3 cut(s) | 424, 908, 3379 |
| XceI | RCATGY | 5 cut(s) | 1131, 1436, 1471, 2649, 2924 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 259 |
| XhoI | CTCGAG | 1 cut(s) | 875 |
| XmaJI | CCTAGG | 1 cut(s) | 3077 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2454 |
| XspI | CTAG | 8 cut(s) | 366, 696, 777, 1172, 1698, 2378, 3078, 3296 |
| Zsp2I | ATGCAT | 4 cut(s) | 247, 1266, 1862, 2651 |