TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 192 | 3.8e-54 | TIR domain |
| TIR_2 | PF13676 | 25 - 120 | 2.6e-14 | TIR domain |
| NB-ARC | PF00931 | 202 - 372 | 5.3e-22 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 443 - 509 | 5.4e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 676 - 746 | 2.1e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 694 - 759 | 3.7e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2744 |
| Acc36I | ACCTGC | 1 cut(s) | 2744 |
| AccB1I | GGYRCC | 1 cut(s) | 2913 |
| AccBSI | CCGCTC | 1 cut(s) | 2377 |
| AccI | GTMKAC | 1 cut(s) | 1558 |
| AccII | CGCG | 1 cut(s) | 103 |
| AciI | CCGC | 8 cut(s) | 95, 684, 1671, 2377, 2600, 2639, 2984, 3041 |
| AclWI | GGATC | 9 cut(s) | 12, 232, 350, 647, 945, 2027, 2055, 2127, 2265 |
| AcoI | YGGCCR | 3 cut(s) | 118, 1951, 2565 |
| AcsI | RAATTY | 9 cut(s) | 1701, 1866, 2388, 2396, 2466, 2681, 2693, 2777, 2790 |
| AcuI | CTGAAG | 3 cut(s) | 70, 899, 2697 |
| AcyI | GRCGYC | 1 cut(s) | 2914 |
| AfaI | GTAC | 3 cut(s) | 128, 2220, 2813 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1949, 2600, 2705 |
| AflII | CTTAAG | 1 cut(s) | 2069 |
| AflIII | ACRYGT | 1 cut(s) | 1875 |
| AgeI | ACCGGT | 1 cut(s) | 2323 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2517 |
| AjnI | CCWGG | 2 cut(s) | 384, 2115 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 952, 984, 2679, 2711 |
| Alw26I | GTCTC | 4 cut(s) | 1961, 2193, 2518, 2863 |
| AlwI | GGATC | 9 cut(s) | 12, 232, 350, 647, 945, 2027, 2055, 2127, 2265 |
| AoxI | GGCC | 6 cut(s) | 118, 382, 1446, 1951, 2173, 2565 |
| ApeKI | GCWGC | 6 cut(s) | 17, 455, 470, 1999, 2274, 2739 |
| ApoI | RAATTY | 9 cut(s) | 1701, 1866, 2388, 2396, 2466, 2681, 2693, 2777, 2790 |
| AseI | ATTAAT | 1 cut(s) | 2759 |
| AsiGI | ACCGGT | 1 cut(s) | 2323 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1335, 1518, 2313 |
| AspLEI | GCGC | 2 cut(s) | 105, 2916 |
| AspS9I | GGNCC | 3 cut(s) | 382, 977, 2708 |
| AsuHPI | GGTGA | 7 cut(s) | 398, 404, 1376, 1975, 2583, 2725, 2977 |
| AvaII | GGWCC | 2 cut(s) | 977, 2708 |
| AxyI | CCTNAGG | 1 cut(s) | 2853 |
| BaeGI | GKGCMC | 1 cut(s) | 1030 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2202, 2235 |
| BalI | TGGCCA | 2 cut(s) | 120, 2567 |
| BanI | GGYRCC | 1 cut(s) | 2913 |
| BauI | CACGAG | 3 cut(s) | 609, 2403, 2544 |
| BbsI | GAAGAC | 3 cut(s) | 624, 1506, 2057 |
| BbvCI | CCTCAGC | 1 cut(s) | 410 |
| BbvI | GCAGC | 6 cut(s) | 29, 467, 482, 1986, 2261, 2726 |
| BccI | CCATC | 4 cut(s) | 389, 494, 2230, 2611 |
| BceAI | ACGGC | 3 cut(s) | 1938, 2046, 2727 |
| BciT130I | CCWGG | 2 cut(s) | 386, 2117 |
| BciVI | GTATCC | 3 cut(s) | 91, 1422, 2941 |
| BcoDI | GTCTC | 4 cut(s) | 1961, 2193, 2518, 2863 |
| BfaI | CTAG | 1 cut(s) | 2261 |
| BfmI | CTRYAG | 1 cut(s) | 2000 |
| BfoI | RGCGCY | 1 cut(s) | 2917 |
| BfrI | CTTAAG | 1 cut(s) | 2069 |
| BfuAI | ACCTGC | 1 cut(s) | 2744 |
| BfuI | GTATCC | 3 cut(s) | 91, 1422, 2941 |
| BglII | AGATCT | 3 cut(s) | 297, 1204, 2263 |
| BisI | GCNGC | 8 cut(s) | 18, 456, 471, 2000, 2275, 2378, 2740, 2984 |
| BlsI | GCNGC | 8 cut(s) | 19, 457, 472, 2001, 2276, 2379, 2741, 2985 |
| Bme1390I | CCNGG | 2 cut(s) | 386, 2117 |
| Bme18I | GGWCC | 2 cut(s) | 977, 2708 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2517 |
| BmgT120I | GGNCC | 3 cut(s) | 382, 977, 2708 |
| BmiI | GGNNCC | 3 cut(s) | 1769, 2605, 2915 |
| BmrFI | CCNGG | 2 cut(s) | 386, 2117 |
| BmsI | GCATC | 6 cut(s) | 272, 1473, 1635, 1713, 2238, 2970 |
| BpiI | GAAGAC | 3 cut(s) | 624, 1506, 2057 |
| BpmI | CTGGAG | 1 cut(s) | 2273 |
| Bpu10I | CCTNAGC | 1 cut(s) | 410 |
| BpuEI | CTTGAG | 2 cut(s) | 1613, 1783 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2262 |
| BsaHI | GRCGYC | 1 cut(s) | 2914 |
| BsaI | GGTCTC | 1 cut(s) | 2863 |
| BsaJI | CCNNGG | 2 cut(s) | 1714, 2607 |
| BsaWI | WCCGGW | 1 cut(s) | 2323 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 777, 807, 1725, 1755, 2953, 2983 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1949, 2600, 2705 |
| Bse118I | RCCGGY | 1 cut(s) | 2323 |
| Bse1I | ACTGG | 3 cut(s) | 121, 2176, 2732 |
| Bse21I | CCTNAGG | 1 cut(s) | 2853 |
| Bse3DI | GCAATG | 1 cut(s) | 1310 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2262 |
| BseBI | CCWGG | 2 cut(s) | 386, 2117 |
| BseDI | CCNNGG | 2 cut(s) | 1714, 2607 |
| BseJI | GATNNNNATC | 1 cut(s) | 2262 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1949, 2600, 2705 |
| BseMI | GCAATG | 1 cut(s) | 1310 |
| BseMII | CTCAG | 4 cut(s) | 71, 424, 2169, 2844 |
| BseNI | ACTGG | 3 cut(s) | 121, 2176, 2732 |
| BseRI | GAGGAG | 1 cut(s) | 198 |
| BseSI | GKGCMC | 1 cut(s) | 1030 |
| BseXI | GCAGC | 6 cut(s) | 29, 467, 482, 1986, 2261, 2726 |
| Bsh1236I | CGCG | 1 cut(s) | 103 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2500 |
| BshFI | GGCC | 6 cut(s) | 120, 384, 1448, 1953, 2175, 2567 |
| BshNI | GGYRCC | 1 cut(s) | 2913 |
| BshTI | ACCGGT | 1 cut(s) | 2323 |
| BsiEI | CGRYCG | 1 cut(s) | 2500 |
| BsiSI | CCGG | 1 cut(s) | 2324 |
| BslFI | GGGAC | 1 cut(s) | 2063 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1949, 2600, 2705 |
| BsmAI | GTCTC | 4 cut(s) | 1961, 2193, 2518, 2863 |
| BsmBI | CGTCTC | 1 cut(s) | 1961 |
| BsmFI | GGGAC | 1 cut(s) | 2063 |
| BsnI | GGCC | 6 cut(s) | 120, 384, 1448, 1953, 2175, 2567 |
| Bso31I | GGTCTC | 1 cut(s) | 2863 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1030 |
| Bsp1407I | TGTACA | 1 cut(s) | 126 |
| Bsp19I | CCATGG | 1 cut(s) | 1714 |
| BspACI | CCGC | 8 cut(s) | 95, 684, 1671, 2377, 2600, 2639, 2984, 3041 |
| BspANI | GGCC | 6 cut(s) | 120, 384, 1448, 1953, 2175, 2567 |
| BspCNI | CTCAG | 4 cut(s) | 72, 423, 2168, 2845 |
| BspFNI | CGCG | 1 cut(s) | 103 |
| BspLI | GGNNCC | 3 cut(s) | 1769, 2605, 2915 |
| BspMAI | CTGCAG | 1 cut(s) | 2004 |
| BspMI | ACCTGC | 1 cut(s) | 2744 |
| BspPI | GGATC | 9 cut(s) | 12, 232, 350, 647, 945, 2027, 2055, 2127, 2265 |
| BspQI | GCTCTTC | 1 cut(s) | 1094 |
| BspT107I | GGYRCC | 1 cut(s) | 2913 |
| BspTI | CTTAAG | 1 cut(s) | 2069 |
| BspTNI | GGTCTC | 1 cut(s) | 2863 |
| BsrBI | CCGCTC | 1 cut(s) | 2377 |
| BsrDI | GCAATG | 1 cut(s) | 1310 |
| BsrFI | RCCGGY | 1 cut(s) | 2323 |
| BsrGI | TGTACA | 1 cut(s) | 126 |
| BsrI | ACTGG | 3 cut(s) | 121, 2176, 2732 |
| BssAI | RCCGGY | 1 cut(s) | 2323 |
| BssECI | CCNNGG | 2 cut(s) | 1714, 2607 |
| BssNI | GRCGYC | 1 cut(s) | 2914 |
| BssSI | CACGAG | 3 cut(s) | 609, 2403, 2544 |
| BssT1I | CCWWGG | 2 cut(s) | 1714, 2607 |
| Bst2BI | CACGAG | 3 cut(s) | 609, 2403, 2544 |
| Bst2UI | CCWGG | 2 cut(s) | 386, 2117 |
| Bst4CI | ACNGT | 7 cut(s) | 131, 874, 1563, 2201, 2271, 2595, 2953 |
| Bst6I | CTCTTC | 2 cut(s) | 1094, 2567 |
| BstACI | GRCGYC | 1 cut(s) | 2914 |
| BstAFI | CTTAAG | 1 cut(s) | 2069 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 260 |
| BstAUI | TGTACA | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 2375 |
| BstDSI | CCRYGG | 1 cut(s) | 1714 |
| BstFNI | CGCG | 1 cut(s) | 103 |
| BstH2I | RGCGCY | 1 cut(s) | 2917 |
| BstHHI | GCGC | 2 cut(s) | 105, 2916 |
| BstMAI | GTCTC | 4 cut(s) | 1961, 2193, 2518, 2863 |
| BstMCI | CGRYCG | 1 cut(s) | 2500 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 260, 1151, 1668 |
| BstNI | CCWGG | 2 cut(s) | 386, 2117 |
| BstNSI | RCATGY | 3 cut(s) | 1353, 1391, 1879 |
| BstSCI | CCNGG | 2 cut(s) | 384, 2115 |
| BstSFI | CTRYAG | 1 cut(s) | 2000 |
| BstSLI | GKGCMC | 1 cut(s) | 1030 |
| BstUI | CGCG | 1 cut(s) | 103 |
| BstV1I | GCAGC | 6 cut(s) | 29, 467, 482, 1986, 2261, 2726 |
| BstV2I | GAAGAC | 3 cut(s) | 624, 1506, 2057 |
| BstX2I | RGATCY | 8 cut(s) | 4, 297, 355, 1204, 2047, 2119, 2257, 2263 |
| BstYI | RGATCY | 8 cut(s) | 4, 297, 355, 1204, 2047, 2119, 2257, 2263 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2853 |
| BsuI | GTATCC | 3 cut(s) | 91, 1422, 2941 |
| BsuRI | GGCC | 6 cut(s) | 120, 384, 1448, 1953, 2175, 2567 |
| BtgI | CCRYGG | 1 cut(s) | 1714 |
| BtsIMutI | CAGTG | 4 cut(s) | 114, 870, 2169, 2197 |
| BveI | ACCTGC | 1 cut(s) | 2744 |
| Cac8I | GCNNGC | 1 cut(s) | 2375 |
| CfoI | GCGC | 2 cut(s) | 105, 2916 |
| Cfr10I | RCCGGY | 1 cut(s) | 2323 |
| Cfr13I | GGNCC | 3 cut(s) | 382, 977, 2708 |
| Csp6I | GTAC | 3 cut(s) | 127, 2219, 2812 |
| CspAI | ACCGGT | 1 cut(s) | 2323 |
| CviQI | GTAC | 3 cut(s) | 127, 2219, 2812 |
| DinI | GGCGCC | 1 cut(s) | 2915 |
| DraI | TTTAAA | 1 cut(s) | 1360 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2517 |
| EaeI | YGGCCR | 3 cut(s) | 118, 1951, 2565 |
| Eam1104I | CTCTTC | 2 cut(s) | 1094, 2567 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2517 |
| EarI | CTCTTC | 2 cut(s) | 1094, 2567 |
| EciI | GGCGGA | 1 cut(s) | 699 |
| Eco130I | CCWWGG | 2 cut(s) | 1714, 2607 |
| Eco147I | AGGCCT | 1 cut(s) | 1448 |
| Eco31I | GGTCTC | 1 cut(s) | 2863 |
| Eco32I | GATATC | 2 cut(s) | 546, 1265 |
| Eco47I | GGWCC | 2 cut(s) | 977, 2708 |
| Eco57I | CTGAAG | 3 cut(s) | 70, 899, 2697 |
| Eco81I | CCTNAGG | 1 cut(s) | 2853 |
| EcoRI | GAATTC | 2 cut(s) | 1866, 2681 |
| EcoRII | CCWGG | 2 cut(s) | 384, 2115 |
| EcoRV | GATATC | 2 cut(s) | 546, 1265 |
| EcoT14I | CCWWGG | 2 cut(s) | 1714, 2607 |
| EcoT22I | ATGCAT | 2 cut(s) | 265, 1488 |
| EgeI | GGCGCC | 1 cut(s) | 2915 |
| EheI | GGCGCC | 1 cut(s) | 2915 |
| ErhI | CCWWGG | 2 cut(s) | 1714, 2607 |
| Esp3I | CGTCTC | 1 cut(s) | 1961 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 263, 295, 1323, 1355, 1646, 1678 |
| FaqI | GGGAC | 1 cut(s) | 2063 |
| FauI | CCCGC | 2 cut(s) | 2593, 3034 |
| FblI | GTMKAC | 1 cut(s) | 1558 |
| Fnu4HI | GCNGC | 8 cut(s) | 18, 456, 471, 2000, 2275, 2378, 2740, 2984 |
| Fsp4HI | GCNGC | 8 cut(s) | 18, 456, 471, 2000, 2275, 2378, 2740, 2984 |
| FspBI | CTAG | 1 cut(s) | 2261 |
| GlaI | GCGC | 2 cut(s) | 104, 2915 |
| GluI | GCNGC | 8 cut(s) | 18, 456, 471, 2000, 2275, 2378, 2740, 2984 |
| GsuI | CTGGAG | 1 cut(s) | 2273 |
| HaeII | RGCGCY | 1 cut(s) | 2917 |
| HaeIII | GGCC | 6 cut(s) | 120, 384, 1448, 1953, 2175, 2567 |
| HapII | CCGG | 1 cut(s) | 2324 |
| HhaI | GCGC | 2 cut(s) | 105, 2916 |
| Hin1I | GRCGYC | 1 cut(s) | 2914 |
| Hin6I | GCGC | 2 cut(s) | 103, 2914 |
| HinP1I | GCGC | 2 cut(s) | 103, 2914 |
| HindIII | AAGCTT | 3 cut(s) | 1077, 1675, 1891 |
| HpaII | CCGG | 1 cut(s) | 2324 |
| HphI | GGTGA | 7 cut(s) | 398, 404, 1376, 1975, 2583, 2725, 2977 |
| Hpy166II | GTNNAC | 7 cut(s) | 334, 718, 928, 1559, 2733, 2872, 3058 |
| Hpy8I | GTNNAC | 7 cut(s) | 334, 718, 928, 1559, 2733, 2872, 3058 |
| HpyCH4III | ACNGT | 7 cut(s) | 131, 874, 1563, 2201, 2271, 2595, 2953 |
| HpyCH4IV | ACGT | 1 cut(s) | 2248 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 260, 1151, 1668 |
| HpySE526I | ACGT | 1 cut(s) | 2248 |
| Hsp92I | GRCGYC | 1 cut(s) | 2914 |
| HspAI | GCGC | 2 cut(s) | 103, 2914 |
| KasI | GGCGCC | 1 cut(s) | 2913 |
| LguI | GCTCTTC | 1 cut(s) | 1094 |
| LmnI | GCTCC | 1 cut(s) | 1906 |
| Lsp1109I | GCAGC | 6 cut(s) | 29, 467, 482, 1986, 2261, 2726 |
| LweI | GCATC | 6 cut(s) | 272, 1473, 1635, 1713, 2238, 2970 |
| MaeI | CTAG | 1 cut(s) | 2261 |
| MaeII | ACGT | 1 cut(s) | 2248 |
| MaeIII | GTNAC | 5 cut(s) | 1301, 1364, 1403, 2145, 2287 |
| MbiI | CCGCTC | 1 cut(s) | 2377 |
| MfeI | CAATTG | 1 cut(s) | 2806 |
| MflI | RGATCY | 8 cut(s) | 4, 297, 355, 1204, 2047, 2119, 2257, 2263 |
| MhlI | GDGCHC | 1 cut(s) | 1030 |
| MlsI | TGGCCA | 2 cut(s) | 120, 2567 |
| MluNI | TGGCCA | 2 cut(s) | 120, 2567 |
| Mly113I | GGCGCC | 1 cut(s) | 2914 |
| MlyI | GAGTC | 2 cut(s) | 2520, 3063 |
| MmeI | TCCRAC | 5 cut(s) | 428, 577, 2140, 2403, 2484 |
| Mox20I | TGGCCA | 2 cut(s) | 120, 2567 |
| Mph1103I | ATGCAT | 2 cut(s) | 265, 1488 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1335, 1518, 2313 |
| MscI | TGGCCA | 2 cut(s) | 120, 2567 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1481 |
| Msp20I | TGGCCA | 2 cut(s) | 120, 2567 |
| MspA1I | CMGCKG | 1 cut(s) | 1671 |
| MspCI | CTTAAG | 1 cut(s) | 2069 |
| MspI | CCGG | 1 cut(s) | 2324 |
| MspR9I | CCNGG | 2 cut(s) | 386, 2117 |
| MunI | CAATTG | 1 cut(s) | 2806 |
| MvaI | CCWGG | 2 cut(s) | 386, 2117 |
| MvnI | CGCG | 1 cut(s) | 103 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 260, 1151, 1668 |
| NarI | GGCGCC | 1 cut(s) | 2914 |
| NcoI | CCATGG | 1 cut(s) | 1714 |
| NlaIV | GGNNCC | 3 cut(s) | 1769, 2605, 2915 |
| NmuCI | GTSAC | 2 cut(s) | 1364, 1403 |
| NsiI | ATGCAT | 2 cut(s) | 265, 1488 |
| NspI | RCATGY | 3 cut(s) | 1353, 1391, 1879 |
| PaqCI | CACCTGC | 1 cut(s) | 2744 |
| PceI | AGGCCT | 1 cut(s) | 1448 |
| PciI | ACATGT | 1 cut(s) | 1875 |
| PciSI | GCTCTTC | 1 cut(s) | 1094 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1965 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1335, 1518, 2313 |
| PinAI | ACCGGT | 1 cut(s) | 2323 |
| PkrI | GCNGC | 8 cut(s) | 19, 457, 472, 2001, 2276, 2379, 2741, 2985 |
| PleI | GAGTC | 2 cut(s) | 2520, 3062 |
| PluTI | GGCGCC | 1 cut(s) | 2917 |
| PpsI | GAGTC | 2 cut(s) | 2520, 3062 |
| PscI | ACATGT | 1 cut(s) | 1875 |
| PshBI | ATTAAT | 1 cut(s) | 2759 |
| Psp6I | CCWGG | 2 cut(s) | 384, 2115 |
| PspGI | CCWGG | 2 cut(s) | 384, 2115 |
| PspN4I | GGNNCC | 3 cut(s) | 1769, 2605, 2915 |
| PspPI | GGNCC | 3 cut(s) | 382, 977, 2708 |
| PstI | CTGCAG | 1 cut(s) | 2004 |
| PsuI | RGATCY | 8 cut(s) | 4, 297, 355, 1204, 2047, 2119, 2257, 2263 |
| RsaI | GTAC | 3 cut(s) | 128, 2220, 2813 |
| RsaNI | GTAC | 3 cut(s) | 127, 2219, 2812 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1481 |
| SapI | GCTCTTC | 1 cut(s) | 1094 |
| SatI | GCNGC | 8 cut(s) | 18, 456, 471, 2000, 2275, 2378, 2740, 2984 |
| Sau96I | GGNCC | 3 cut(s) | 382, 977, 2708 |
| SchI | GAGTC | 2 cut(s) | 2520, 3063 |
| ScrFI | CCNGG | 2 cut(s) | 386, 2117 |
| SduI | GDGCHC | 1 cut(s) | 1030 |
| SfaNI | GCATC | 6 cut(s) | 272, 1473, 1635, 1713, 2238, 2970 |
| SfcI | CTRYAG | 1 cut(s) | 2000 |
| SfoI | GGCGCC | 1 cut(s) | 2915 |
| SinI | GGWCC | 2 cut(s) | 977, 2708 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1481 |
| SmlI | CTYRAG | 3 cut(s) | 1592, 1762, 2069 |
| SmoI | CTYRAG | 3 cut(s) | 1592, 1762, 2069 |
| SseBI | AGGCCT | 1 cut(s) | 1448 |
| SsiI | CCGC | 8 cut(s) | 95, 684, 1671, 2377, 2600, 2639, 2984, 3041 |
| SspDI | GGCGCC | 1 cut(s) | 2913 |
| SspMI | CTAG | 1 cut(s) | 2261 |
| StuI | AGGCCT | 1 cut(s) | 1448 |
| StyD4I | CCNGG | 2 cut(s) | 384, 2115 |
| StyI | CCWWGG | 2 cut(s) | 1714, 2607 |
| TaaI | ACNGT | 7 cut(s) | 131, 874, 1563, 2201, 2271, 2595, 2953 |
| TaiI | ACGT | 1 cut(s) | 2251 |
| TaqI | TCGA | 6 cut(s) | 210, 1959, 2225, 2843, 3001, 3066 |
| TaqII | GACCGA | 1 cut(s) | 2486 |
| TatI | WGTACW | 1 cut(s) | 126 |
| TauI | GCSGC | 2 cut(s) | 2380, 2986 |
| TscAI | CASTG | 4 cut(s) | 121, 877, 2176, 2204 |
| TseFI | GTSAC | 2 cut(s) | 1364, 1403 |
| TseI | GCWGC | 6 cut(s) | 17, 455, 470, 1999, 2274, 2739 |
| Tsp45I | GTSAC | 2 cut(s) | 1364, 1403 |
| TspGWI | ACGGA | 4 cut(s) | 348, 1167, 1625, 2706 |
| TspRI | CASTG | 4 cut(s) | 121, 877, 2176, 2204 |
| Vha464I | CTTAAG | 1 cut(s) | 2069 |
| VpaK11BI | GGWCC | 2 cut(s) | 977, 2708 |
| VspI | ATTAAT | 1 cut(s) | 2759 |
| XapI | RAATTY | 9 cut(s) | 1701, 1866, 2388, 2396, 2466, 2681, 2693, 2777, 2790 |
| XbaI | TCTAGA | 1 cut(s) | 2260 |
| XceI | RCATGY | 3 cut(s) | 1353, 1391, 1879 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 392, 2614 |
| XmiI | GTMKAC | 1 cut(s) | 1558 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1335, 1518, 2313 |
| XspI | CTAG | 1 cut(s) | 2261 |
| Zsp2I | ATGCAT | 2 cut(s) | 265, 1488 |