TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 25 - 192 | 2e-49 | TIR domain |
| TIR_2 | PF13676 | 27 - 121 | 6.3e-14 | TIR domain |
| NB-ARC | PF00931 | 205 - 373 | 3e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 442 - 510 | 4.8e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 685 - 771 | 4.8e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 709 - 812 | 4e-10 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 734 - 791 | 3.3e-07 | Leucine rich repeat |
| LRR_13 | PF23286 | 781 - 866 | 1.5e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 802 - 864 | 9.2e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2232 |
| AarI | CACCTGC | 1 cut(s) | 3050 |
| Acc36I | ACCTGC | 2 cut(s) | 2034, 3050 |
| AccB1I | GGYRCC | 1 cut(s) | 2085 |
| AccI | GTMKAC | 1 cut(s) | 720 |
| AccII | CGCG | 1 cut(s) | 2689 |
| AciI | CCGC | 6 cut(s) | 687, 2298, 2583, 2687, 2689, 2945 |
| AcoI | YGGCCR | 3 cut(s) | 121, 1978, 2877 |
| AcuI | CTGAAG | 3 cut(s) | 76, 902, 3003 |
| AfaI | GTAC | 3 cut(s) | 131, 2247, 2532 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1774, 1976, 2906 |
| AflII | CTTAAG | 3 cut(s) | 629, 2096, 2381 |
| AgeI | ACCGGT | 1 cut(s) | 2635 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2128, 2413 |
| AhlI | ACTAGT | 2 cut(s) | 1810, 2825 |
| AjnI | CCWGG | 3 cut(s) | 387, 1815, 2142 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 955, 987, 2985, 3017 |
| Alw21I | GWGCWC | 1 cut(s) | 3016 |
| Alw26I | GTCTC | 6 cut(s) | 1988, 2115, 2220, 2400, 2505, 2830 |
| AoxI | GGCC | 7 cut(s) | 121, 385, 1449, 1978, 2200, 2485, 2877 |
| ApeKI | GCWGC | 2 cut(s) | 458, 473 |
| AseI | ATTAAT | 2 cut(s) | 3062, 3180 |
| AsiGI | ACCGGT | 1 cut(s) | 2635 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1338, 1521, 2625 |
| AspLEI | GCGC | 1 cut(s) | 2427 |
| AspS9I | GGNCC | 3 cut(s) | 385, 980, 1777 |
| AsuC2I | CCSGG | 1 cut(s) | 3006 |
| AsuHPI | GGTGA | 7 cut(s) | 110, 401, 407, 1379, 2002, 2889, 3031 |
| AsuII | TTCGAA | 1 cut(s) | 744 |
| AvaII | GGWCC | 2 cut(s) | 980, 1777 |
| BaeGI | GKGCMC | 1 cut(s) | 1033 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2229, 2262, 2514, 2547 |
| BalI | TGGCCA | 2 cut(s) | 123, 2879 |
| BanI | GGYRCC | 1 cut(s) | 2085 |
| BauI | CACGAG | 3 cut(s) | 612, 2715, 2856 |
| BbsI | GAAGAC | 3 cut(s) | 627, 1509, 1932 |
| Bbv12I | GWGCWC | 1 cut(s) | 3016 |
| BbvCI | CCTCAGC | 1 cut(s) | 413 |
| BbvI | GCAGC | 2 cut(s) | 470, 485 |
| BccI | CCATC | 7 cut(s) | 392, 497, 1718, 2171, 2257, 2542, 2917 |
| BceAI | ACGGC | 3 cut(s) | 1965, 2073, 3030 |
| BciT130I | CCWGG | 3 cut(s) | 389, 1817, 2144 |
| BciVI | GTATCC | 2 cut(s) | 1425, 3209 |
| BcnI | CCSGG | 1 cut(s) | 3006 |
| BcoDI | GTCTC | 6 cut(s) | 1988, 2115, 2220, 2400, 2505, 2830 |
| BcuI | ACTAGT | 2 cut(s) | 1810, 2825 |
| BfaI | CTAG | 3 cut(s) | 1811, 2573, 2826 |
| BfmI | CTRYAG | 1 cut(s) | 2027 |
| BfoI | RGCGCY | 1 cut(s) | 2428 |
| BfrI | CTTAAG | 3 cut(s) | 629, 2096, 2381 |
| BfuAI | ACCTGC | 2 cut(s) | 2034, 3050 |
| BfuI | GTATCC | 2 cut(s) | 1425, 3209 |
| BglII | AGATCT | 3 cut(s) | 300, 1207, 2575 |
| BisI | GCNGC | 4 cut(s) | 459, 474, 2690, 2946 |
| BlsI | GCNGC | 4 cut(s) | 460, 475, 2691, 2947 |
| Bme1390I | CCNGG | 4 cut(s) | 389, 1817, 2144, 3006 |
| Bme18I | GGWCC | 2 cut(s) | 980, 1777 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2128, 2413 |
| BmgT120I | GGNCC | 3 cut(s) | 385, 980, 1777 |
| BmiI | GGNNCC | 4 cut(s) | 19, 1778, 2087, 2911 |
| BmrFI | CCNGG | 4 cut(s) | 389, 1817, 2144, 3006 |
| BmsI | GCATC | 9 cut(s) | 275, 1476, 1638, 1722, 2265, 2291, 2440, 2550, 2576 |
| BpiI | GAAGAC | 3 cut(s) | 627, 1509, 1932 |
| BpmI | CTGGAG | 2 cut(s) | 2300, 2585 |
| Bpu10I | CCTNAGC | 1 cut(s) | 413 |
| Bpu14I | TTCGAA | 1 cut(s) | 744 |
| BpuEI | CTTGAG | 3 cut(s) | 1616, 1792, 3176 |
| BpuMI | CCSGG | 1 cut(s) | 3006 |
| BsaAI | YACGTR | 1 cut(s) | 1028 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2574 |
| BsaJI | CCNNGG | 7 cut(s) | 13, 1033, 1816, 1873, 2687, 2751, 2913 |
| BsaWI | WCCGGW | 1 cut(s) | 2635 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 780, 810, 1734, 1764, 3221 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1774, 1976, 2906 |
| Bse118I | RCCGGY | 1 cut(s) | 2635 |
| Bse1I | ACTGG | 4 cut(s) | 124, 2203, 2488, 3038 |
| Bse3DI | GCAATG | 1 cut(s) | 1313 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2574 |
| BseBI | CCWGG | 3 cut(s) | 389, 1817, 2144 |
| BseDI | CCNNGG | 7 cut(s) | 13, 1033, 1816, 1873, 2687, 2751, 2913 |
| BseJI | GATNNNNATC | 1 cut(s) | 2574 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1774, 1976, 2906 |
| BseMI | GCAATG | 1 cut(s) | 1313 |
| BseMII | CTCAG | 4 cut(s) | 77, 427, 2196, 2481 |
| BseNI | ACTGG | 4 cut(s) | 124, 2203, 2488, 3038 |
| BseRI | GAGGAG | 2 cut(s) | 201, 2297 |
| BseSI | GKGCMC | 1 cut(s) | 1033 |
| BseXI | GCAGC | 2 cut(s) | 470, 485 |
| Bsh1236I | CGCG | 1 cut(s) | 2689 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1802, 2812 |
| BshFI | GGCC | 7 cut(s) | 123, 387, 1451, 1980, 2202, 2487, 2879 |
| BshNI | GGYRCC | 1 cut(s) | 2085 |
| BshTI | ACCGGT | 1 cut(s) | 2635 |
| BsiEI | CGRYCG | 2 cut(s) | 1802, 2812 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3016 |
| BsiSI | CCGG | 2 cut(s) | 2636, 3006 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1774, 1976, 2906 |
| BsmAI | GTCTC | 6 cut(s) | 1988, 2115, 2220, 2400, 2505, 2830 |
| BsmBI | CGTCTC | 1 cut(s) | 1988 |
| BsnI | GGCC | 7 cut(s) | 123, 387, 1451, 1980, 2202, 2487, 2879 |
| Bsp119I | TTCGAA | 1 cut(s) | 744 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1033, 3016 |
| Bsp1407I | TGTACA | 1 cut(s) | 129 |
| Bsp19I | CCATGG | 2 cut(s) | 1033, 1873 |
| BspACI | CCGC | 6 cut(s) | 687, 2298, 2583, 2687, 2689, 2945 |
| BspANI | GGCC | 7 cut(s) | 123, 387, 1451, 1980, 2202, 2487, 2879 |
| BspCNI | CTCAG | 4 cut(s) | 78, 426, 2195, 2480 |
| BspFNI | CGCG | 1 cut(s) | 2689 |
| BspLI | GGNNCC | 4 cut(s) | 19, 1778, 2087, 2911 |
| BspMAI | CTGCAG | 1 cut(s) | 2031 |
| BspMI | ACCTGC | 2 cut(s) | 2034, 3050 |
| BspQI | GCTCTTC | 1 cut(s) | 1097 |
| BspT104I | TTCGAA | 1 cut(s) | 744 |
| BspT107I | GGYRCC | 1 cut(s) | 2085 |
| BspTI | CTTAAG | 3 cut(s) | 629, 2096, 2381 |
| BsrDI | GCAATG | 1 cut(s) | 1313 |
| BsrFI | RCCGGY | 1 cut(s) | 2635 |
| BsrGI | TGTACA | 1 cut(s) | 129 |
| BsrI | ACTGG | 4 cut(s) | 124, 2203, 2488, 3038 |
| BssAI | RCCGGY | 1 cut(s) | 2635 |
| BssECI | CCNNGG | 7 cut(s) | 13, 1033, 1816, 1873, 2687, 2751, 2913 |
| BssSI | CACGAG | 3 cut(s) | 612, 2715, 2856 |
| BssT1I | CCWWGG | 4 cut(s) | 1033, 1873, 2751, 2913 |
| Bst2BI | CACGAG | 3 cut(s) | 612, 2715, 2856 |
| Bst2UI | CCWGG | 3 cut(s) | 389, 1817, 2144 |
| Bst4CI | ACNGT | 7 cut(s) | 859, 877, 1673, 2228, 2513, 2901, 3221 |
| Bst6I | CTCTTC | 3 cut(s) | 28, 52, 1097 |
| BstAFI | CTTAAG | 3 cut(s) | 629, 2096, 2381 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 263 |
| BstAUI | TGTACA | 1 cut(s) | 129 |
| BstBAI | YACGTR | 1 cut(s) | 1028 |
| BstBI | TTCGAA | 1 cut(s) | 744 |
| BstC8I | GCNNGC | 2 cut(s) | 2429, 2687 |
| BstDSI | CCRYGG | 3 cut(s) | 1033, 1873, 2687 |
| BstFNI | CGCG | 1 cut(s) | 2689 |
| BstH2I | RGCGCY | 1 cut(s) | 2428 |
| BstHHI | GCGC | 1 cut(s) | 2427 |
| BstMAI | GTCTC | 6 cut(s) | 1988, 2115, 2220, 2400, 2505, 2830 |
| BstMCI | CGRYCG | 2 cut(s) | 1802, 2812 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 263 |
| BstNI | CCWGG | 3 cut(s) | 389, 1817, 2144 |
| BstNSI | RCATGY | 2 cut(s) | 1356, 1394 |
| BstSCI | CCNGG | 4 cut(s) | 387, 1815, 2142, 3004 |
| BstSFI | CTRYAG | 1 cut(s) | 2027 |
| BstSLI | GKGCMC | 1 cut(s) | 1033 |
| BstUI | CGCG | 1 cut(s) | 2689 |
| BstV1I | GCAGC | 2 cut(s) | 470, 485 |
| BstV2I | GAAGAC | 3 cut(s) | 627, 1509, 1932 |
| BsuI | GTATCC | 2 cut(s) | 1425, 3209 |
| BsuRI | GGCC | 7 cut(s) | 123, 387, 1451, 1980, 2202, 2487, 2879 |
| BtgI | CCRYGG | 3 cut(s) | 1033, 1873, 2687 |
| BtgZI | GCGATG | 1 cut(s) | 1737 |
| BtsIMutI | CAGTG | 7 cut(s) | 117, 855, 873, 2196, 2224, 2481, 2509 |
| BveI | ACCTGC | 2 cut(s) | 2034, 3050 |
| Cac8I | GCNNGC | 2 cut(s) | 2429, 2687 |
| CfoI | GCGC | 1 cut(s) | 2427 |
| Cfr10I | RCCGGY | 1 cut(s) | 2635 |
| Cfr13I | GGNCC | 3 cut(s) | 385, 980, 1777 |
| Cfr42I | CCGCGG | 1 cut(s) | 2690 |
| Csp6I | GTAC | 3 cut(s) | 130, 2246, 2531 |
| CspAI | ACCGGT | 1 cut(s) | 2635 |
| CviQI | GTAC | 3 cut(s) | 130, 2246, 2531 |
| DraI | TTTAAA | 1 cut(s) | 1363 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2128, 2413 |
| EaeI | YGGCCR | 3 cut(s) | 121, 1978, 2877 |
| Eam1104I | CTCTTC | 3 cut(s) | 28, 52, 1097 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2128, 2413 |
| EarI | CTCTTC | 3 cut(s) | 28, 52, 1097 |
| EciI | GGCGGA | 1 cut(s) | 702 |
| Eco130I | CCWWGG | 4 cut(s) | 1033, 1873, 2751, 2913 |
| Eco147I | AGGCCT | 1 cut(s) | 1451 |
| Eco32I | GATATC | 2 cut(s) | 549, 1268 |
| Eco47I | GGWCC | 2 cut(s) | 980, 1777 |
| Eco57I | CTGAAG | 3 cut(s) | 76, 902, 3003 |
| EcoO109I | RGGNCCY | 2 cut(s) | 385, 1777 |
| EcoRI | GAATTC | 2 cut(s) | 1893, 2987 |
| EcoRII | CCWGG | 3 cut(s) | 387, 1815, 2142 |
| EcoRV | GATATC | 2 cut(s) | 549, 1268 |
| EcoT14I | CCWWGG | 4 cut(s) | 1033, 1873, 2751, 2913 |
| EcoT22I | ATGCAT | 2 cut(s) | 268, 1491 |
| ErhI | CCWWGG | 4 cut(s) | 1033, 1873, 2751, 2913 |
| Esp3I | CGTCTC | 1 cut(s) | 1988 |
| FauI | CCCGC | 1 cut(s) | 2694 |
| FblI | GTMKAC | 1 cut(s) | 720 |
| Fnu4HI | GCNGC | 4 cut(s) | 459, 474, 2690, 2946 |
| Fsp4HI | GCNGC | 4 cut(s) | 459, 474, 2690, 2946 |
| FspBI | CTAG | 3 cut(s) | 1811, 2573, 2826 |
| GlaI | GCGC | 1 cut(s) | 2426 |
| GluI | GCNGC | 4 cut(s) | 459, 474, 2690, 2946 |
| GsuI | CTGGAG | 2 cut(s) | 2300, 2585 |
| HaeII | RGCGCY | 1 cut(s) | 2428 |
| HaeIII | GGCC | 7 cut(s) | 123, 387, 1451, 1980, 2202, 2487, 2879 |
| HapII | CCGG | 2 cut(s) | 2636, 3006 |
| HhaI | GCGC | 1 cut(s) | 2427 |
| Hin6I | GCGC | 1 cut(s) | 2425 |
| HinP1I | GCGC | 1 cut(s) | 2425 |
| HincII | GTYRAC | 3 cut(s) | 145, 2378, 2955 |
| HindII | GTYRAC | 3 cut(s) | 145, 2378, 2955 |
| HindIII | AAGCTT | 2 cut(s) | 1678, 1918 |
| HpaI | GTTAAC | 1 cut(s) | 145 |
| HpaII | CCGG | 2 cut(s) | 2636, 3006 |
| HphI | GGTGA | 7 cut(s) | 110, 401, 407, 1379, 2002, 2889, 3031 |
| Hpy166II | GTNNAC | 9 cut(s) | 69, 145, 337, 721, 931, 2378, 2955, 3039, 3175 |
| Hpy8I | GTNNAC | 9 cut(s) | 69, 145, 337, 721, 931, 2378, 2955, 3039, 3175 |
| Hpy99I | CGWCG | 2 cut(s) | 367, 2094 |
| HpyCH4III | ACNGT | 7 cut(s) | 859, 877, 1673, 2228, 2513, 2901, 3221 |
| HpyCH4IV | ACGT | 4 cut(s) | 1027, 1162, 2275, 2560 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 263 |
| HpySE526I | ACGT | 4 cut(s) | 1027, 1162, 2275, 2560 |
| HspAI | GCGC | 1 cut(s) | 2425 |
| KspAI | GTTAAC | 1 cut(s) | 145 |
| KspI | CCGCGG | 1 cut(s) | 2690 |
| LguI | GCTCTTC | 1 cut(s) | 1097 |
| LmnI | GCTCC | 3 cut(s) | 17, 205, 2284 |
| Lsp1109I | GCAGC | 2 cut(s) | 470, 485 |
| LweI | GCATC | 9 cut(s) | 275, 1476, 1638, 1722, 2265, 2291, 2440, 2550, 2576 |
| MaeI | CTAG | 3 cut(s) | 1811, 2573, 2826 |
| MaeII | ACGT | 4 cut(s) | 1027, 1162, 2275, 2560 |
| MaeIII | GTNAC | 9 cut(s) | 850, 1304, 1367, 1406, 2172, 2314, 2457, 2599, 3160 |
| MhlI | GDGCHC | 2 cut(s) | 1033, 3016 |
| MlsI | TGGCCA | 2 cut(s) | 123, 2879 |
| MluNI | TGGCCA | 2 cut(s) | 123, 2879 |
| MlyI | GAGTC | 5 cut(s) | 1047, 2152, 2756, 2832, 2950 |
| MmeI | TCCRAC | 6 cut(s) | 345, 431, 580, 2167, 2452, 2796 |
| Mox20I | TGGCCA | 2 cut(s) | 123, 2879 |
| Mph1103I | ATGCAT | 2 cut(s) | 268, 1491 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1338, 1521, 2625 |
| MscI | TGGCCA | 2 cut(s) | 123, 2879 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1484 |
| Msp20I | TGGCCA | 2 cut(s) | 123, 2879 |
| MspA1I | CMGCKG | 1 cut(s) | 2689 |
| MspCI | CTTAAG | 3 cut(s) | 629, 2096, 2381 |
| MspI | CCGG | 2 cut(s) | 2636, 3006 |
| MspR9I | CCNGG | 4 cut(s) | 389, 1817, 2144, 3006 |
| MvaI | CCWGG | 3 cut(s) | 389, 1817, 2144 |
| MvnI | CGCG | 1 cut(s) | 2689 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 263 |
| NciI | CCSGG | 1 cut(s) | 3006 |
| NcoI | CCATGG | 2 cut(s) | 1033, 1873 |
| NlaIV | GGNNCC | 4 cut(s) | 19, 1778, 2087, 2911 |
| NmuCI | GTSAC | 4 cut(s) | 850, 1367, 1406, 3160 |
| NsiI | ATGCAT | 2 cut(s) | 268, 1491 |
| NspI | RCATGY | 2 cut(s) | 1356, 1394 |
| NspV | TTCGAA | 1 cut(s) | 744 |
| PaqCI | CACCTGC | 1 cut(s) | 3050 |
| PceI | AGGCCT | 1 cut(s) | 1451 |
| PciSI | GCTCTTC | 1 cut(s) | 1097 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1992 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1338, 1521, 2625 |
| PfeI | GAWTC | 8 cut(s) | 317, 838, 870, 1177, 1282, 2621, 2795, 3019 |
| PfoI | TCCNGGA | 1 cut(s) | 3004 |
| PinAI | ACCGGT | 1 cut(s) | 2635 |
| PkrI | GCNGC | 4 cut(s) | 460, 475, 2691, 2947 |
| Ple19I | CGATCG | 1 cut(s) | 1802 |
| PleI | GAGTC | 5 cut(s) | 1046, 2152, 2755, 2832, 2950 |
| PpsI | GAGTC | 5 cut(s) | 1046, 2152, 2755, 2832, 2950 |
| Ppu21I | YACGTR | 1 cut(s) | 1028 |
| PpuMI | RGGWCCY | 1 cut(s) | 1777 |
| PshBI | ATTAAT | 2 cut(s) | 3062, 3180 |
| PsiI | TTATAA | 1 cut(s) | 2232 |
| Psp5II | RGGWCCY | 1 cut(s) | 1777 |
| Psp6I | CCWGG | 3 cut(s) | 387, 1815, 2142 |
| PspGI | CCWGG | 3 cut(s) | 387, 1815, 2142 |
| PspN4I | GGNNCC | 4 cut(s) | 19, 1778, 2087, 2911 |
| PspPI | GGNCC | 3 cut(s) | 385, 980, 1777 |
| PspPPI | RGGWCCY | 1 cut(s) | 1777 |
| PstI | CTGCAG | 1 cut(s) | 2031 |
| PvuI | CGATCG | 1 cut(s) | 1802 |
| RsaI | GTAC | 3 cut(s) | 131, 2247, 2532 |
| RsaNI | GTAC | 3 cut(s) | 130, 2246, 2531 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1484 |
| SacII | CCGCGG | 1 cut(s) | 2690 |
| SapI | GCTCTTC | 1 cut(s) | 1097 |
| SatI | GCNGC | 4 cut(s) | 459, 474, 2690, 2946 |
| Sau96I | GGNCC | 3 cut(s) | 385, 980, 1777 |
| SchI | GAGTC | 5 cut(s) | 1047, 2152, 2756, 2832, 2950 |
| ScrFI | CCNGG | 4 cut(s) | 389, 1817, 2144, 3006 |
| SduI | GDGCHC | 2 cut(s) | 1033, 3016 |
| SfaNI | GCATC | 9 cut(s) | 275, 1476, 1638, 1722, 2265, 2291, 2440, 2550, 2576 |
| SfcI | CTRYAG | 1 cut(s) | 2027 |
| Sfr303I | CCGCGG | 1 cut(s) | 2690 |
| SfuI | TTCGAA | 1 cut(s) | 744 |
| SgrBI | CCGCGG | 1 cut(s) | 2690 |
| SinI | GGWCC | 2 cut(s) | 980, 1777 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1484 |
| SmlI | CTYRAG | 6 cut(s) | 629, 1595, 1771, 2096, 2381, 3155 |
| SmoI | CTYRAG | 6 cut(s) | 629, 1595, 1771, 2096, 2381, 3155 |
| SpeI | ACTAGT | 2 cut(s) | 1810, 2825 |
| SseBI | AGGCCT | 1 cut(s) | 1451 |
| SsiI | CCGC | 6 cut(s) | 687, 2298, 2583, 2687, 2689, 2945 |
| SspMI | CTAG | 3 cut(s) | 1811, 2573, 2826 |
| StuI | AGGCCT | 1 cut(s) | 1451 |
| StyD4I | CCNGG | 4 cut(s) | 387, 1815, 2142, 3004 |
| StyI | CCWWGG | 4 cut(s) | 1033, 1873, 2751, 2913 |
| TaaI | ACNGT | 7 cut(s) | 859, 877, 1673, 2228, 2513, 2901, 3221 |
| TaiI | ACGT | 4 cut(s) | 1030, 1165, 2278, 2563 |
| TaqII | GACCGA | 1 cut(s) | 2798 |
| TatI | WGTACW | 1 cut(s) | 129 |
| TauI | GCSGC | 2 cut(s) | 2692, 2948 |
| TfiI | GAWTC | 8 cut(s) | 317, 838, 870, 1177, 1282, 2621, 2795, 3019 |
| TscAI | CASTG | 7 cut(s) | 124, 862, 880, 2203, 2231, 2488, 2516 |
| TseFI | GTSAC | 4 cut(s) | 850, 1367, 1406, 3160 |
| TseI | GCWGC | 2 cut(s) | 458, 473 |
| Tsp45I | GTSAC | 4 cut(s) | 850, 1367, 1406, 3160 |
| TspGWI | ACGGA | 4 cut(s) | 351, 1170, 1628, 1706 |
| TspRI | CASTG | 7 cut(s) | 124, 862, 880, 2203, 2231, 2488, 2516 |
| Vha464I | CTTAAG | 3 cut(s) | 629, 2096, 2381 |
| VpaK11BI | GGWCC | 2 cut(s) | 980, 1777 |
| VspI | ATTAAT | 2 cut(s) | 3062, 3180 |
| XbaI | TCTAGA | 1 cut(s) | 2572 |
| XceI | RCATGY | 2 cut(s) | 1356, 1394 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2920 |
| XmiI | GTMKAC | 1 cut(s) | 720 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1338, 1521, 2625 |
| XspI | CTAG | 3 cut(s) | 1811, 2573, 2826 |
| Zsp2I | ATGCAT | 2 cut(s) | 268, 1491 |