regulation of response to stimulus
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 434 |
| AciI | CCGC | 2 cut(s) | 166, 432 |
| AclI | AACGTT | 1 cut(s) | 399 |
| AclWI | GGATC | 1 cut(s) | 323 |
| AdeI | CACNNNGTG | 1 cut(s) | 249 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 34 |
| AgsI | TTSAA | 1 cut(s) | 256 |
| AjiI | CACGTC | 1 cut(s) | 406 |
| AluBI | AGCT | 5 cut(s) | 107, 178, 371, 423, 474 |
| AluI | AGCT | 5 cut(s) | 107, 178, 371, 423, 474 |
| Alw21I | GWGCWC | 1 cut(s) | 180 |
| AlwI | GGATC | 1 cut(s) | 323 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 447 |
| Ama87I | CYCGRG | 1 cut(s) | 350 |
| ApeKI | GCWGC | 1 cut(s) | 5 |
| AspS9I | GGNCC | 1 cut(s) | 429 |
| AsuC2I | CCSGG | 1 cut(s) | 460 |
| AvaI | CYCGRG | 1 cut(s) | 350 |
| AvaII | GGWCC | 1 cut(s) | 429 |
| BanII | GRGCYC | 1 cut(s) | 180 |
| BauI | CACGAG | 1 cut(s) | 263 |
| BbsI | GAAGAC | 2 cut(s) | 75, 153 |
| Bbv12I | GWGCWC | 1 cut(s) | 180 |
| BccI | CCATC | 1 cut(s) | 102 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 67, 101 |
| BcnI | CCSGG | 1 cut(s) | 460 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 1 cut(s) | 460 |
| Bme18I | GGWCC | 1 cut(s) | 429 |
| BmeT110I | CYCGRG | 1 cut(s) | 350 |
| BmgBI | CACGTC | 1 cut(s) | 406 |
| BmgT120I | GGNCC | 1 cut(s) | 429 |
| BmrFI | CCNGG | 1 cut(s) | 460 |
| BmsI | GCATC | 2 cut(s) | 130, 456 |
| BpiI | GAAGAC | 2 cut(s) | 75, 153 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 418, 450 |
| BpmI | CTGGAG | 1 cut(s) | 445 |
| BpuMI | CCSGG | 1 cut(s) | 460 |
| BsaJI | CCNNGG | 1 cut(s) | 28 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 34 |
| BseDI | CCNNGG | 1 cut(s) | 28 |
| BseGI | GGATG | 2 cut(s) | 239, 468 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 34 |
| BseMII | CTCAG | 1 cut(s) | 166 |
| BsgI | GTGCAG | 1 cut(s) | 437 |
| Bsh1285I | CGRYCG | 1 cut(s) | 166 |
| BsiEI | CGRYCG | 1 cut(s) | 166 |
| BsiHKAI | GWGCWC | 1 cut(s) | 180 |
| BsiHKCI | CYCGRG | 1 cut(s) | 350 |
| BsiSI | CCGG | 1 cut(s) | 459 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 34 |
| BsmI | GAATGC | 1 cut(s) | 284 |
| BsoBI | CYCGRG | 1 cut(s) | 350 |
| Bsp1286I | GDGCHC | 1 cut(s) | 180 |
| Bsp143I | GATC | 1 cut(s) | 328 |
| BspACI | CCGC | 2 cut(s) | 166, 432 |
| BspCNI | CTCAG | 1 cut(s) | 165 |
| BspPI | GGATC | 1 cut(s) | 323 |
| BspQI | GCTCTTC | 1 cut(s) | 441 |
| BsrBI | CCGCTC | 1 cut(s) | 434 |
| BssECI | CCNNGG | 1 cut(s) | 28 |
| BssMI | GATC | 1 cut(s) | 328 |
| BssSI | CACGAG | 1 cut(s) | 263 |
| BssT1I | CCWWGG | 1 cut(s) | 28 |
| Bst2BI | CACGAG | 1 cut(s) | 263 |
| Bst6I | CTCTTC | 1 cut(s) | 441 |
| BstC8I | GCNNGC | 1 cut(s) | 448 |
| BstDEI | CTNAG | 1 cut(s) | 152 |
| BstF5I | GGATG | 2 cut(s) | 239, 468 |
| BstKTI | GATC | 1 cut(s) | 331 |
| BstMBI | GATC | 1 cut(s) | 328 |
| BstMCI | CGRYCG | 1 cut(s) | 166 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 90 |
| BstSCI | CCNGG | 1 cut(s) | 458 |
| BstV2I | GAAGAC | 2 cut(s) | 75, 153 |
| BtrI | CACGTC | 1 cut(s) | 406 |
| BtsCI | GGATG | 2 cut(s) | 239, 468 |
| Cac8I | GCNNGC | 1 cut(s) | 448 |
| CaiI | CAGNNNCTG | 1 cut(s) | 447 |
| Cfr13I | GGNCC | 1 cut(s) | 429 |
| CseI | GACGC | 1 cut(s) | 101 |
| CviAII | CATG | 2 cut(s) | 246, 383 |
| CviJI | RGCY | 9 cut(s) | 5, 84, 93, 107, 178, 371, 423, 446, 474 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 84, 93, 107, 178, 371, 423, 446, 474 |
| DdeI | CTNAG | 1 cut(s) | 152 |
| DpnI | GATC | 1 cut(s) | 330 |
| DpnII | GATC | 1 cut(s) | 328 |
| DraIII | CACNNNGTG | 1 cut(s) | 249 |
| Eam1104I | CTCTTC | 1 cut(s) | 441 |
| EarI | CTCTTC | 1 cut(s) | 441 |
| Ecl136II | GAGCTC | 1 cut(s) | 178 |
| Eco130I | CCWWGG | 1 cut(s) | 28 |
| Eco24I | GRGCYC | 1 cut(s) | 180 |
| Eco47I | GGWCC | 1 cut(s) | 429 |
| Eco53kI | GAGCTC | 1 cut(s) | 178 |
| Eco88I | CYCGRG | 1 cut(s) | 350 |
| EcoICRI | GAGCTC | 1 cut(s) | 178 |
| EcoT14I | CCWWGG | 1 cut(s) | 28 |
| EcoT38I | GRGCYC | 1 cut(s) | 180 |
| ErhI | CCWWGG | 1 cut(s) | 28 |
| FaeI | CATG | 2 cut(s) | 249, 386 |
| FaiI | YATR | 3 cut(s) | 234, 247, 384 |
| FatI | CATG | 2 cut(s) | 245, 382 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| FokI | GGATG | 2 cut(s) | 226, 475 |
| FriOI | GRGCYC | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| GluI | GCNGC | 1 cut(s) | 6 |
| GsuI | CTGGAG | 1 cut(s) | 445 |
| HapII | CCGG | 1 cut(s) | 459 |
| HgaI | GACGC | 1 cut(s) | 101 |
| Hin1II | CATG | 2 cut(s) | 249, 386 |
| HincII | GTYRAC | 1 cut(s) | 403 |
| HindII | GTYRAC | 1 cut(s) | 403 |
| HindIII | AAGCTT | 1 cut(s) | 369 |
| HinfI | GANTC | 2 cut(s) | 190, 197 |
| HpaII | CCGG | 1 cut(s) | 459 |
| Hpy166II | GTNNAC | 2 cut(s) | 347, 403 |
| Hpy188I | TCNGA | 3 cut(s) | 117, 155, 175 |
| Hpy188III | TCNNGA | 2 cut(s) | 181, 194 |
| Hpy8I | GTNNAC | 2 cut(s) | 347, 403 |
| HpyAV | CCTTC | 3 cut(s) | 142, 380, 403 |
| HpyCH4IV | ACGT | 2 cut(s) | 399, 405 |
| HpyCH4V | TGCA | 5 cut(s) | 282, 365, 418, 450, 469 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 90 |
| HpyF3I | CTNAG | 1 cut(s) | 152 |
| HpySE526I | ACGT | 2 cut(s) | 399, 405 |
| Hsp92II | CATG | 2 cut(s) | 249, 386 |
| Kzo9I | GATC | 1 cut(s) | 328 |
| LguI | GCTCTTC | 1 cut(s) | 441 |
| LmnI | GCTCC | 1 cut(s) | 183 |
| LpnPI | CCDG | 6 cut(s) | 194, 311, 409, 454, 460, 472 |
| LweI | GCATC | 2 cut(s) | 130, 456 |
| MaeII | ACGT | 2 cut(s) | 399, 405 |
| MalI | GATC | 1 cut(s) | 330 |
| MbiI | CCGCTC | 1 cut(s) | 434 |
| MboI | GATC | 1 cut(s) | 328 |
| MboII | GAAGA | 7 cut(s) | 3, 6, 9, 12, 80, 158, 428 |
| MhlI | GDGCHC | 1 cut(s) | 180 |
| MluCI | AATT | 2 cut(s) | 451, 485 |
| MlyI | GAGTC | 1 cut(s) | 206 |
| MnlI | CCTC | 5 cut(s) | 56, 161, 346, 406, 420 |
| MslI | CAYNNNNRTG | 1 cut(s) | 244 |
| MspI | CCGG | 1 cut(s) | 459 |
| MspR9I | CCNGG | 1 cut(s) | 460 |
| Mva1269I | GAATGC | 1 cut(s) | 284 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 90 |
| NciI | CCSGG | 1 cut(s) | 460 |
| NdeII | GATC | 1 cut(s) | 328 |
| NlaIII | CATG | 2 cut(s) | 249, 386 |
| PaeR7I | CTCGAG | 1 cut(s) | 350 |
| PciSI | GCTCTTC | 1 cut(s) | 441 |
| PctI | GAATGC | 1 cut(s) | 284 |
| PfeI | GAWTC | 1 cut(s) | 190 |
| PfoI | TCCNGGA | 1 cut(s) | 458 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| Psp124BI | GAGCTC | 1 cut(s) | 180 |
| Psp1406I | AACGTT | 1 cut(s) | 399 |
| PspPI | GGNCC | 1 cut(s) | 429 |
| PspXI | VCTCGAGB | 1 cut(s) | 350 |
| PstNI | CAGNNNCTG | 1 cut(s) | 447 |
| RseI | CAYNNNNRTG | 1 cut(s) | 244 |
| SacI | GAGCTC | 1 cut(s) | 180 |
| SapI | GCTCTTC | 1 cut(s) | 441 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 1 cut(s) | 328 |
| Sau96I | GGNCC | 1 cut(s) | 429 |
| SchI | GAGTC | 1 cut(s) | 206 |
| ScrFI | CCNGG | 1 cut(s) | 460 |
| SduI | GDGCHC | 1 cut(s) | 180 |
| SfaNI | GCATC | 2 cut(s) | 130, 456 |
| Sfr274I | CTCGAG | 1 cut(s) | 350 |
| SinI | GGWCC | 1 cut(s) | 429 |
| SlaI | CTCGAG | 1 cut(s) | 350 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 244 |
| SmlI | CTYRAG | 1 cut(s) | 350 |
| SmoI | CTYRAG | 1 cut(s) | 350 |
| Sse9I | AATT | 2 cut(s) | 451, 485 |
| SsiI | CCGC | 2 cut(s) | 166, 432 |
| SspI | AATATT | 1 cut(s) | 340 |
| SstI | GAGCTC | 1 cut(s) | 180 |
| StyD4I | CCNGG | 1 cut(s) | 458 |
| StyI | CCWWGG | 1 cut(s) | 28 |
| TaiI | ACGT | 2 cut(s) | 402, 408 |
| TaqI | TCGA | 4 cut(s) | 193, 209, 327, 351 |
| TasI | AATT | 2 cut(s) | 451, 485 |
| TfiI | GAWTC | 1 cut(s) | 190 |
| TseI | GCWGC | 1 cut(s) | 5 |
| TspDTI | ATGAA | 4 cut(s) | 40, 124, 228, 399 |
| TspGWI | ACGGA | 1 cut(s) | 321 |
| VpaK11BI | GGWCC | 1 cut(s) | 429 |
| XhoI | CTCGAG | 1 cut(s) | 350 |