TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3840 |
| AatII | GACGTC | 1 cut(s) | 976 |
| Acc36I | ACCTGC | 2 cut(s) | 1357, 3840 |
| Acc65I | GGTACC | 1 cut(s) | 1607 |
| AccB1I | GGYRCC | 3 cut(s) | 725, 1607, 2829 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1009 |
| AccI | GTMKAC | 2 cut(s) | 1063, 2806 |
| AccII | CGCG | 2 cut(s) | 2336, 3885 |
| AciI | CCGC | 4 cut(s) | 434, 1342, 2054, 2777 |
| AclI | AACGTT | 1 cut(s) | 2231 |
| AclWI | GGATC | 9 cut(s) | 262, 320, 559, 817, 1020, 2451, 2520, 3858, 3864 |
| AcoI | YGGCCR | 2 cut(s) | 525, 795 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AcyI | GRCGYC | 1 cut(s) | 973 |
| AfaI | GTAC | 5 cut(s) | 511, 533, 1569, 1609, 3984 |
| AfeI | AGCGCT | 1 cut(s) | 103 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 243, 1009, 1955, 2839, 3313 |
| AflII | CTTAAG | 1 cut(s) | 2389 |
| AflIII | ACRYGT | 4 cut(s) | 580, 2334, 2538, 3722 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 2130, 3031, 3322 |
| AjnI | CCWGG | 4 cut(s) | 1002, 1400, 1477, 1780 |
| AleI | CACNNNNGTG | 1 cut(s) | 3464 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 582, 614, 3411, 3443 |
| Alw21I | GWGCWC | 1 cut(s) | 2100 |
| Alw26I | GTCTC | 9 cut(s) | 964, 2003, 2315, 2343, 3007, 3040, 3083, 3141, 3416 |
| Alw44I | GTGCAC | 1 cut(s) | 2096 |
| AlwI | GGATC | 9 cut(s) | 262, 320, 559, 817, 1020, 2451, 2520, 3858, 3864 |
| Ama87I | CYCGRG | 2 cut(s) | 3415, 3778 |
| Aor51HI | AGCGCT | 1 cut(s) | 103 |
| AoxI | GGCC | 7 cut(s) | 88, 525, 621, 795, 1117, 1383, 1712 |
| ApaLI | GTGCAC | 1 cut(s) | 2096 |
| ApeKI | GCWGC | 4 cut(s) | 419, 1184, 1995, 3938 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1269 |
| Asp718I | GGTACC | 1 cut(s) | 1607 |
| AspA2I | CCTAGG | 1 cut(s) | 3521 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 5 cut(s) | 403, 621, 1000, 1384, 3826 |
| AsuC2I | CCSGG | 4 cut(s) | 827, 3255, 3416, 3417 |
| AvaI | CYCGRG | 2 cut(s) | 3415, 3778 |
| AvaII | GGWCC | 3 cut(s) | 403, 1000, 3826 |
| AvrII | CCTAGG | 1 cut(s) | 3521 |
| BaeGI | GKGCMC | 3 cut(s) | 1662, 2100, 2834 |
| BalI | TGGCCA | 2 cut(s) | 527, 797 |
| BanI | GGYRCC | 3 cut(s) | 725, 1607, 2829 |
| BauI | CACGAG | 1 cut(s) | 552 |
| BbsI | GAAGAC | 4 cut(s) | 1979, 2723, 3879, 4059 |
| Bbv12I | GWGCWC | 1 cut(s) | 2100 |
| BbvI | GCAGC | 4 cut(s) | 431, 1171, 1982, 3950 |
| BceAI | ACGGC | 1 cut(s) | 3382 |
| BciT130I | CCWGG | 4 cut(s) | 1004, 1402, 1479, 1782 |
| BciVI | GTATCC | 2 cut(s) | 61, 3211 |
| BclI | TGATCA | 7 cut(s) | 6, 139, 883, 2932, 3700, 3910, 3991 |
| BcnI | CCSGG | 4 cut(s) | 827, 3255, 3416, 3417 |
| BcoDI | GTCTC | 9 cut(s) | 964, 2003, 2315, 2343, 3007, 3040, 3083, 3141, 3416 |
| BfaI | CTAG | 7 cut(s) | 807, 1353, 1430, 1916, 2816, 2880, 3522 |
| BfmI | CTRYAG | 3 cut(s) | 910, 3743, 3942 |
| BfoI | RGCGCY | 1 cut(s) | 105 |
| BfrI | CTTAAG | 1 cut(s) | 2389 |
| BfuAI | ACCTGC | 2 cut(s) | 1357, 3840 |
| BfuI | GTATCC | 2 cut(s) | 61, 3211 |
| BisI | GCNGC | 7 cut(s) | 420, 435, 1185, 1342, 1996, 2777, 3939 |
| BlnI | CCTAGG | 1 cut(s) | 3521 |
| BlsI | GCNGC | 7 cut(s) | 421, 436, 1186, 1343, 1997, 2778, 3940 |
| Bme1390I | CCNGG | 8 cut(s) | 827, 1004, 1402, 1479, 1782, 3255, 3416, 3417 |
| Bme18I | GGWCC | 3 cut(s) | 403, 1000, 3826 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 2130, 3031, 3322 |
| BmeT110I | CYCGRG | 2 cut(s) | 3415, 3778 |
| BmgT120I | GGNCC | 5 cut(s) | 403, 621, 1000, 1384, 3826 |
| BmiI | GGNNCC | 8 cut(s) | 622, 727, 1609, 2048, 2058, 2831, 3827, 4026 |
| BmrFI | CCNGG | 8 cut(s) | 827, 1004, 1402, 1479, 1782, 3255, 3416, 3417 |
| BmrI | ACTGGG | 1 cut(s) | 530 |
| BmuI | ACTGGG | 1 cut(s) | 530 |
| BpiI | GAAGAC | 4 cut(s) | 1979, 2723, 3879, 4059 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1209, 1241 |
| BpmI | CTGGAG | 1 cut(s) | 1689 |
| BpuEI | CTTGAG | 4 cut(s) | 1013, 1717, 2027, 2096 |
| BpuMI | CCSGG | 4 cut(s) | 827, 3255, 3416, 3417 |
| Bsa29I | ATCGAT | 1 cut(s) | 2966 |
| BsaAI | YACGTR | 2 cut(s) | 581, 764 |
| BsaBI | GATNNNNATC | 5 cut(s) | 882, 2428, 3515, 3855, 3993 |
| BsaHI | GRCGYC | 1 cut(s) | 973 |
| BsaI | GGTCTC | 1 cut(s) | 3007 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 243, 1009, 1955, 2839, 3313 |
| Bse118I | RCCGGY | 1 cut(s) | 623 |
| Bse1I | ACTGG | 5 cut(s) | 308, 459, 536, 2844, 3240 |
| Bse3DI | GCAATG | 3 cut(s) | 1165, 1278, 4092 |
| Bse8I | GATNNNNATC | 5 cut(s) | 882, 2428, 3515, 3855, 3993 |
| BseBI | CCWGG | 4 cut(s) | 1004, 1402, 1479, 1782 |
| BseCI | ATCGAT | 1 cut(s) | 2966 |
| BseJI | GATNNNNATC | 5 cut(s) | 882, 2428, 3515, 3855, 3993 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 243, 1009, 1955, 2839, 3313 |
| BseMI | GCAATG | 3 cut(s) | 1165, 1278, 4092 |
| BseMII | CTCAG | 5 cut(s) | 41, 160, 959, 3942, 4091 |
| BseNI | ACTGG | 5 cut(s) | 308, 459, 536, 2844, 3240 |
| BseRI | GAGGAG | 2 cut(s) | 168, 2883 |
| BseSI | GKGCMC | 3 cut(s) | 1662, 2100, 2834 |
| BseXI | GCAGC | 4 cut(s) | 431, 1171, 1982, 3950 |
| BseYI | CCCAGC | 3 cut(s) | 1655, 2958, 3082 |
| BsgI | GTGCAG | 1 cut(s) | 298 |
| Bsh1236I | CGCG | 2 cut(s) | 2336, 3885 |
| BshFI | GGCC | 7 cut(s) | 90, 527, 623, 797, 1119, 1385, 1714 |
| BshNI | GGYRCC | 3 cut(s) | 725, 1607, 2829 |
| BshVI | ATCGAT | 1 cut(s) | 2966 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2100 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3415, 3778 |
| BsiSI | CCGG | 4 cut(s) | 624, 826, 3254, 3416 |
| BslFI | GGGAC | 2 cut(s) | 3270, 3619 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 243, 1009, 1955, 2839, 3313 |
| BsmAI | GTCTC | 9 cut(s) | 964, 2003, 2315, 2343, 3007, 3040, 3083, 3141, 3416 |
| BsmBI | CGTCTC | 2 cut(s) | 964, 2343 |
| BsmFI | GGGAC | 2 cut(s) | 3270, 3619 |
| BsmI | GAATGC | 3 cut(s) | 389, 1051, 2155 |
| BsnI | GGCC | 7 cut(s) | 90, 527, 623, 797, 1119, 1385, 1714 |
| Bso31I | GGTCTC | 1 cut(s) | 3007 |
| BsoBI | CYCGRG | 2 cut(s) | 3415, 3778 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1662, 2100, 2834 |
| Bsp19I | CCATGG | 1 cut(s) | 29 |
| BspACI | CCGC | 4 cut(s) | 434, 1342, 2054, 2777 |
| BspANI | GGCC | 7 cut(s) | 90, 527, 623, 797, 1119, 1385, 1714 |
| BspCNI | CTCAG | 5 cut(s) | 42, 159, 960, 3941, 4092 |
| BspDI | ATCGAT | 1 cut(s) | 2966 |
| BspFNI | CGCG | 2 cut(s) | 2336, 3885 |
| BspHI | TCATGA | 5 cut(s) | 379, 1018, 1504, 3697, 3859 |
| BspLI | GGNNCC | 8 cut(s) | 622, 727, 1609, 2048, 2058, 2831, 3827, 4026 |
| BspMI | ACCTGC | 2 cut(s) | 1357, 3840 |
| BspPI | GGATC | 9 cut(s) | 262, 320, 559, 817, 1020, 2451, 2520, 3858, 3864 |
| BspT107I | GGYRCC | 3 cut(s) | 725, 1607, 2829 |
| BspTI | CTTAAG | 1 cut(s) | 2389 |
| BspTNI | GGTCTC | 1 cut(s) | 3007 |
| BsrDI | GCAATG | 3 cut(s) | 1165, 1278, 4092 |
| BsrFI | RCCGGY | 1 cut(s) | 623 |
| BsrI | ACTGG | 5 cut(s) | 308, 459, 536, 2844, 3240 |
| BssAI | RCCGGY | 1 cut(s) | 623 |
| BssNI | GRCGYC | 1 cut(s) | 973 |
| BssSI | CACGAG | 1 cut(s) | 552 |
| BssT1I | CCWWGG | 9 cut(s) | 29, 1114, 2181, 2319, 2454, 2592, 3204, 3307, 3521 |
| Bst2BI | CACGAG | 1 cut(s) | 552 |
| Bst2UI | CCWGG | 4 cut(s) | 1004, 1402, 1479, 1782 |
| BstACI | GRCGYC | 1 cut(s) | 973 |
| BstAFI | CTTAAG | 1 cut(s) | 2389 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1426 |
| BstBAI | YACGTR | 2 cut(s) | 581, 764 |
| BstC8I | GCNNGC | 3 cut(s) | 3088, 3883, 4063 |
| BstDSI | CCRYGG | 1 cut(s) | 29 |
| BstFNI | CGCG | 2 cut(s) | 2336, 3885 |
| BstH2I | RGCGCY | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstMAI | GTCTC | 9 cut(s) | 964, 2003, 2315, 2343, 3007, 3040, 3083, 3141, 3416 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 803, 1426, 3663, 3944, 4091 |
| BstNI | CCWGG | 4 cut(s) | 1004, 1402, 1479, 1782 |
| BstNSI | RCATGY | 4 cut(s) | 1287, 1627, 3383, 3726 |
| BstSCI | CCNGG | 8 cut(s) | 825, 1002, 1400, 1477, 1780, 3253, 3414, 3415 |
| BstSFI | CTRYAG | 3 cut(s) | 910, 3743, 3942 |
| BstSLI | GKGCMC | 3 cut(s) | 1662, 2100, 2834 |
| BstUI | CGCG | 2 cut(s) | 2336, 3885 |
| BstV1I | GCAGC | 4 cut(s) | 431, 1171, 1982, 3950 |
| BstV2I | GAAGAC | 4 cut(s) | 1979, 2723, 3879, 4059 |
| BstX2I | RGATCY | 4 cut(s) | 267, 564, 2443, 2512 |
| BstYI | RGATCY | 4 cut(s) | 267, 564, 2443, 2512 |
| Bsu15I | ATCGAT | 1 cut(s) | 2966 |
| BsuI | GTATCC | 2 cut(s) | 61, 3211 |
| BsuRI | GGCC | 7 cut(s) | 90, 527, 623, 797, 1119, 1385, 1714 |
| BsuTUI | ATCGAT | 1 cut(s) | 2966 |
| BtgI | CCRYGG | 1 cut(s) | 29 |
| BtsIMutI | CAGTG | 5 cut(s) | 281, 466, 1254, 2788, 3003 |
| BveI | ACCTGC | 2 cut(s) | 1357, 3840 |
| Cac8I | GCNNGC | 3 cut(s) | 3088, 3883, 4063 |
| CciI | TCATGA | 5 cut(s) | 379, 1018, 1504, 3697, 3859 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Cfr10I | RCCGGY | 1 cut(s) | 623 |
| Cfr13I | GGNCC | 5 cut(s) | 403, 621, 1000, 1384, 3826 |
| Cfr9I | CCCGGG | 1 cut(s) | 3415 |
| ClaI | ATCGAT | 1 cut(s) | 2966 |
| CseI | GACGC | 4 cut(s) | 98, 2325, 2342, 2477 |
| Csp6I | GTAC | 5 cut(s) | 510, 532, 1568, 1608, 3983 |
| CviQI | GTAC | 5 cut(s) | 510, 532, 1568, 1608, 3983 |
| DraI | TTTAAA | 1 cut(s) | 1054 |
| DriI | GACNNNNNGTC | 3 cut(s) | 2130, 3031, 3322 |
| EaeI | YGGCCR | 2 cut(s) | 525, 795 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 2130, 3031, 3322 |
| Eco130I | CCWWGG | 9 cut(s) | 29, 1114, 2181, 2319, 2454, 2592, 3204, 3307, 3521 |
| Eco147I | AGGCCT | 1 cut(s) | 1119 |
| Eco31I | GGTCTC | 1 cut(s) | 3007 |
| Eco32I | GATATC | 1 cut(s) | 3785 |
| Eco47I | GGWCC | 3 cut(s) | 403, 1000, 3826 |
| Eco47III | AGCGCT | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| Eco88I | CYCGRG | 2 cut(s) | 3415, 3778 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1384 |
| EcoRII | CCWGG | 4 cut(s) | 1002, 1400, 1477, 1780 |
| EcoRV | GATATC | 1 cut(s) | 3785 |
| EcoT14I | CCWWGG | 9 cut(s) | 29, 1114, 2181, 2319, 2454, 2592, 3204, 3307, 3521 |
| EcoT22I | ATGCAT | 2 cut(s) | 235, 1422 |
| ErhI | CCWWGG | 9 cut(s) | 29, 1114, 2181, 2319, 2454, 2592, 3204, 3307, 3521 |
| Esp3I | CGTCTC | 2 cut(s) | 964, 2343 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 233, 265, 1051, 1083 |
| FaqI | GGGAC | 2 cut(s) | 3270, 3619 |
| FbaI | TGATCA | 7 cut(s) | 6, 139, 883, 2932, 3700, 3910, 3991 |
| FblI | GTMKAC | 2 cut(s) | 1063, 2806 |
| Fnu4HI | GCNGC | 7 cut(s) | 420, 435, 1185, 1342, 1996, 2777, 3939 |
| Fsp4HI | GCNGC | 7 cut(s) | 420, 435, 1185, 1342, 1996, 2777, 3939 |
| FspBI | CTAG | 7 cut(s) | 807, 1353, 1430, 1916, 2816, 2880, 3522 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GluI | GCNGC | 7 cut(s) | 420, 435, 1185, 1342, 1996, 2777, 3939 |
| GsaI | CCCAGC | 3 cut(s) | 1659, 2962, 3086 |
| GsuI | CTGGAG | 1 cut(s) | 1689 |
| HaeII | RGCGCY | 1 cut(s) | 105 |
| HaeIII | GGCC | 7 cut(s) | 90, 527, 623, 797, 1119, 1385, 1714 |
| HapII | CCGG | 4 cut(s) | 624, 826, 3254, 3416 |
| HgaI | GACGC | 4 cut(s) | 98, 2325, 2342, 2477 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1I | GRCGYC | 1 cut(s) | 973 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HincII | GTYRAC | 1 cut(s) | 1064 |
| HindII | GTYRAC | 1 cut(s) | 1064 |
| HindIII | AAGCTT | 3 cut(s) | 572, 1031, 1332 |
| HpaII | CCGG | 4 cut(s) | 624, 826, 3254, 3416 |
| Hpy99I | CGWCG | 1 cut(s) | 2558 |
| HpyCH4IV | ACGT | 8 cut(s) | 580, 763, 973, 1096, 1368, 2231, 2538, 2803 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 803, 1426, 3663, 3944, 4091 |
| HpySE526I | ACGT | 8 cut(s) | 580, 763, 973, 1096, 1368, 2231, 2538, 2803 |
| Hsp92I | GRCGYC | 1 cut(s) | 973 |
| HspAI | GCGC | 1 cut(s) | 102 |
| KpnI | GGTACC | 1 cut(s) | 1611 |
| Ksp22I | TGATCA | 7 cut(s) | 6, 139, 883, 2932, 3700, 3910, 3991 |
| LmnI | GCTCC | 4 cut(s) | 1992, 2398, 3739, 3813 |
| Lsp1109I | GCAGC | 4 cut(s) | 431, 1171, 1982, 3950 |
| MaeI | CTAG | 7 cut(s) | 807, 1353, 1430, 1916, 2816, 2880, 3522 |
| MaeII | ACGT | 8 cut(s) | 580, 763, 973, 1096, 1368, 2231, 2538, 2803 |
| MaeIII | GTNAC | 5 cut(s) | 905, 1235, 1464, 2842, 3613 |
| MflI | RGATCY | 4 cut(s) | 267, 564, 2443, 2512 |
| MhlI | GDGCHC | 3 cut(s) | 1662, 2100, 2834 |
| MlsI | TGGCCA | 2 cut(s) | 527, 797 |
| MluI | ACGCGT | 1 cut(s) | 2334 |
| MluNI | TGGCCA | 2 cut(s) | 527, 797 |
| MlyI | GAGTC | 7 cut(s) | 1472, 1795, 1993, 2117, 2119, 3695, 3920 |
| MmeI | TCCRAC | 4 cut(s) | 1936, 2012, 2652, 4061 |
| Mox20I | TGGCCA | 2 cut(s) | 527, 797 |
| Mph1103I | ATGCAT | 2 cut(s) | 235, 1422 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1269 |
| MscI | TGGCCA | 2 cut(s) | 527, 797 |
| MslI | CAYNNNNRTG | 8 cut(s) | 131, 1415, 1509, 3317, 3464, 3702, 3864, 3999 |
| Msp20I | TGGCCA | 2 cut(s) | 527, 797 |
| MspA1I | CMGCKG | 1 cut(s) | 3941 |
| MspCI | CTTAAG | 1 cut(s) | 2389 |
| MspI | CCGG | 4 cut(s) | 624, 826, 3254, 3416 |
| MspR9I | CCNGG | 8 cut(s) | 827, 1004, 1402, 1479, 1782, 3255, 3416, 3417 |
| Mva1269I | GAATGC | 3 cut(s) | 389, 1051, 2155 |
| MvaI | CCWGG | 4 cut(s) | 1004, 1402, 1479, 1782 |
| MvnI | CGCG | 2 cut(s) | 2336, 3885 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 803, 1426, 3663, 3944, 4091 |
| NciI | CCSGG | 4 cut(s) | 827, 3255, 3416, 3417 |
| NcoI | CCATGG | 1 cut(s) | 29 |
| NlaIV | GGNNCC | 8 cut(s) | 622, 727, 1609, 2048, 2058, 2831, 3827, 4026 |
| NmuCI | GTSAC | 3 cut(s) | 905, 1464, 3613 |
| NsiI | ATGCAT | 2 cut(s) | 235, 1422 |
| NspI | RCATGY | 4 cut(s) | 1287, 1627, 3383, 3726 |
| OliI | CACNNNNGTG | 1 cut(s) | 3464 |
| PaeR7I | CTCGAG | 1 cut(s) | 3778 |
| PagI | TCATGA | 5 cut(s) | 379, 1018, 1504, 3697, 3859 |
| PaqCI | CACCTGC | 1 cut(s) | 3840 |
| PceI | AGGCCT | 1 cut(s) | 1119 |
| PciI | ACATGT | 1 cut(s) | 3722 |
| PctI | GAATGC | 3 cut(s) | 389, 1051, 2155 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1269 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1009 |
| PfoI | TCCNGGA | 3 cut(s) | 825, 1002, 3253 |
| PkrI | GCNGC | 7 cut(s) | 421, 436, 1186, 1343, 1997, 2778, 3940 |
| PleI | GAGTC | 7 cut(s) | 1471, 1794, 1992, 2116, 2119, 3694, 3920 |
| PpsI | GAGTC | 7 cut(s) | 1471, 1794, 1992, 2116, 2119, 3694, 3920 |
| Ppu21I | YACGTR | 2 cut(s) | 581, 764 |
| PscI | ACATGT | 1 cut(s) | 3722 |
| Psp1406I | AACGTT | 1 cut(s) | 2231 |
| Psp6I | CCWGG | 4 cut(s) | 1002, 1400, 1477, 1780 |
| PspFI | CCCAGC | 3 cut(s) | 1655, 2958, 3082 |
| PspGI | CCWGG | 4 cut(s) | 1002, 1400, 1477, 1780 |
| PspN4I | GGNNCC | 8 cut(s) | 622, 727, 1609, 2048, 2058, 2831, 3827, 4026 |
| PspPI | GGNCC | 5 cut(s) | 403, 621, 1000, 1384, 3826 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1086, 1118, 1752, 1784 |
| PsuI | RGATCY | 4 cut(s) | 267, 564, 2443, 2512 |
| PvuII | CAGCTG | 1 cut(s) | 3941 |
| RsaI | GTAC | 5 cut(s) | 511, 533, 1569, 1609, 3984 |
| RsaNI | GTAC | 5 cut(s) | 510, 532, 1568, 1608, 3983 |
| RseI | CAYNNNNRTG | 8 cut(s) | 131, 1415, 1509, 3317, 3464, 3702, 3864, 3999 |
| SalI | GTCGAC | 1 cut(s) | 1062 |
| SatI | GCNGC | 7 cut(s) | 420, 435, 1185, 1342, 1996, 2777, 3939 |
| Sau96I | GGNCC | 5 cut(s) | 403, 621, 1000, 1384, 3826 |
| SchI | GAGTC | 7 cut(s) | 1472, 1795, 1993, 2117, 2119, 3695, 3920 |
| ScrFI | CCNGG | 8 cut(s) | 827, 1004, 1402, 1479, 1782, 3255, 3416, 3417 |
| SduI | GDGCHC | 3 cut(s) | 1662, 2100, 2834 |
| SfcI | CTRYAG | 3 cut(s) | 910, 3743, 3942 |
| Sfr274I | CTCGAG | 1 cut(s) | 3778 |
| SinI | GGWCC | 3 cut(s) | 403, 1000, 3826 |
| SlaI | CTCGAG | 1 cut(s) | 3778 |
| SmaI | CCCGGG | 1 cut(s) | 3417 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 131, 1415, 1509, 3317, 3464, 3702, 3864, 3999 |
| SmlI | CTYRAG | 6 cut(s) | 1028, 1696, 2006, 2075, 2389, 3778 |
| SmoI | CTYRAG | 6 cut(s) | 1028, 1696, 2006, 2075, 2389, 3778 |
| SseBI | AGGCCT | 1 cut(s) | 1119 |
| SsiI | CCGC | 4 cut(s) | 434, 1342, 2054, 2777 |
| SspI | AATATT | 1 cut(s) | 1537 |
| SspMI | CTAG | 7 cut(s) | 807, 1353, 1430, 1916, 2816, 2880, 3522 |
| StuI | AGGCCT | 1 cut(s) | 1119 |
| StyD4I | CCNGG | 8 cut(s) | 825, 1002, 1400, 1477, 1780, 3253, 3414, 3415 |
| StyI | CCWWGG | 9 cut(s) | 29, 1114, 2181, 2319, 2454, 2592, 3204, 3307, 3521 |
| TaiI | ACGT | 8 cut(s) | 583, 766, 976, 1099, 1371, 2234, 2541, 2806 |
| TatI | WGTACW | 2 cut(s) | 509, 3982 |
| TauI | GCSGC | 3 cut(s) | 437, 1344, 2779 |
| TscAI | CASTG | 5 cut(s) | 281, 466, 1261, 2788, 3003 |
| TseFI | GTSAC | 3 cut(s) | 905, 1464, 3613 |
| TseI | GCWGC | 4 cut(s) | 419, 1184, 1995, 3938 |
| Tsp45I | GTSAC | 3 cut(s) | 905, 1464, 3613 |
| TspGWI | ACGGA | 1 cut(s) | 2805 |
| TspMI | CCCGGG | 1 cut(s) | 3415 |
| TspRI | CASTG | 5 cut(s) | 281, 466, 1261, 2788, 3003 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1009 |
| Vha464I | CTTAAG | 1 cut(s) | 2389 |
| VneI | GTGCAC | 1 cut(s) | 2096 |
| VpaK11BI | GGWCC | 3 cut(s) | 403, 1000, 3826 |
| XbaI | TCTAGA | 2 cut(s) | 1915, 2815 |
| XceI | RCATGY | 4 cut(s) | 1287, 1627, 3383, 3726 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 247, 3587 |
| XhoI | CTCGAG | 1 cut(s) | 3778 |
| XmaI | CCCGGG | 1 cut(s) | 3415 |
| XmaJI | CCTAGG | 1 cut(s) | 3521 |
| XmiI | GTMKAC | 2 cut(s) | 1063, 2806 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1269 |
| XspI | CTAG | 7 cut(s) | 807, 1353, 1430, 1916, 2816, 2880, 3522 |
| ZraI | GACGTC | 1 cut(s) | 974 |
| Zsp2I | ATGCAT | 2 cut(s) | 235, 1422 |