TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 166 - 265 | 2.6e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1339 |
| Acc36I | ACCTGC | 1 cut(s) | 1339 |
| AccII | CGCG | 1 cut(s) | 1216 |
| AclWI | GGATC | 5 cut(s) | 354, 400, 659, 1110, 1206 |
| AcoI | YGGCCR | 1 cut(s) | 1144 |
| AcsI | RAATTY | 3 cut(s) | 253, 277, 632 |
| AcuI | CTGAAG | 1 cut(s) | 301 |
| AfaI | GTAC | 1 cut(s) | 510 |
| AfeI | AGCGCT | 1 cut(s) | 492 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 626 |
| AflIII | ACRYGT | 3 cut(s) | 269, 505, 968 |
| AjnI | CCWGG | 2 cut(s) | 36, 957 |
| AluBI | AGCT | 6 cut(s) | 265, 502, 694, 1079, 1263, 1325 |
| AluI | AGCT | 6 cut(s) | 265, 502, 694, 1079, 1263, 1325 |
| Alw26I | GTCTC | 2 cut(s) | 96, 667 |
| AlwI | GGATC | 5 cut(s) | 354, 400, 659, 1110, 1206 |
| Aor51HI | AGCGCT | 1 cut(s) | 492 |
| AoxI | GGCC | 5 cut(s) | 143, 758, 955, 1144, 1420 |
| ApeKI | GCWGC | 2 cut(s) | 941, 1322 |
| ApoI | RAATTY | 3 cut(s) | 253, 277, 632 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1011, 1043 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 917 |
| AspLEI | GCGC | 1 cut(s) | 493 |
| AspS9I | GGNCC | 3 cut(s) | 34, 72, 759 |
| AsuC2I | CCSGG | 1 cut(s) | 897 |
| AsuHPI | GGTGA | 1 cut(s) | 1265 |
| AvaII | GGWCC | 2 cut(s) | 34, 72 |
| BalI | TGGCCA | 1 cut(s) | 1146 |
| BbvI | GCAGC | 2 cut(s) | 928, 1334 |
| BccI | CCATC | 3 cut(s) | 778, 835, 1097 |
| BceAI | ACGGC | 1 cut(s) | 1363 |
| BciT130I | CCWGG | 2 cut(s) | 38, 959 |
| BclI | TGATCA | 1 cut(s) | 1249 |
| BcnI | CCSGG | 1 cut(s) | 897 |
| BcoDI | GTCTC | 2 cut(s) | 96, 667 |
| BfaI | CTAG | 5 cut(s) | 350, 488, 779, 1352, 1424 |
| BfoI | RGCGCY | 1 cut(s) | 494 |
| BfuAI | ACCTGC | 1 cut(s) | 1339 |
| BisI | GCNGC | 2 cut(s) | 942, 1323 |
| BlsI | GCNGC | 2 cut(s) | 943, 1324 |
| Bme1390I | CCNGG | 3 cut(s) | 38, 897, 959 |
| Bme18I | GGWCC | 2 cut(s) | 34, 72 |
| BmgT120I | GGNCC | 3 cut(s) | 34, 72, 759 |
| BmiI | GGNNCC | 2 cut(s) | 909, 920 |
| BmrFI | CCNGG | 3 cut(s) | 38, 897, 959 |
| BmsI | GCATC | 1 cut(s) | 413 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1260, 1292 |
| BpmI | CTGGAG | 3 cut(s) | 120, 422, 761 |
| BpuEI | CTTGAG | 2 cut(s) | 580, 731 |
| BpuMI | CCSGG | 1 cut(s) | 897 |
| BsaAI | YACGTR | 1 cut(s) | 272 |
| BsaJI | CCNNGG | 1 cut(s) | 647 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 101, 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 626 |
| Bse1I | ACTGG | 4 cut(s) | 124, 744, 1026, 1410 |
| Bse3DI | GCAATG | 2 cut(s) | 155, 391 |
| BseBI | CCWGG | 2 cut(s) | 38, 959 |
| BseDI | CCNNGG | 1 cut(s) | 647 |
| BseGI | GGATG | 1 cut(s) | 530 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 626 |
| BseMI | GCAATG | 2 cut(s) | 155, 391 |
| BseNI | ACTGG | 4 cut(s) | 124, 744, 1026, 1410 |
| BseXI | GCAGC | 2 cut(s) | 928, 1334 |
| BsgI | GTGCAG | 1 cut(s) | 993 |
| Bsh1236I | CGCG | 1 cut(s) | 1216 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1075 |
| BshFI | GGCC | 5 cut(s) | 145, 760, 957, 1146, 1422 |
| BsiEI | CGRYCG | 1 cut(s) | 1075 |
| BsiSI | CCGG | 1 cut(s) | 897 |
| BslFI | GGGAC | 1 cut(s) | 258 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 626 |
| BsmAI | GTCTC | 2 cut(s) | 96, 667 |
| BsmFI | GGGAC | 1 cut(s) | 258 |
| BsnI | GGCC | 5 cut(s) | 145, 760, 957, 1146, 1422 |
| BspANI | GGCC | 5 cut(s) | 145, 760, 957, 1146, 1422 |
| BspFNI | CGCG | 1 cut(s) | 1216 |
| BspLI | GGNNCC | 2 cut(s) | 909, 920 |
| BspMI | ACCTGC | 1 cut(s) | 1339 |
| BspPI | GGATC | 5 cut(s) | 354, 400, 659, 1110, 1206 |
| BsrDI | GCAATG | 2 cut(s) | 155, 391 |
| BsrI | ACTGG | 4 cut(s) | 124, 744, 1026, 1410 |
| BssECI | CCNNGG | 1 cut(s) | 647 |
| BssT1I | CCWWGG | 1 cut(s) | 647 |
| Bst2UI | CCWGG | 2 cut(s) | 38, 959 |
| Bst4CI | ACNGT | 5 cut(s) | 479, 818, 1130, 1208, 1226 |
| BstBAI | YACGTR | 1 cut(s) | 272 |
| BstDEI | CTNAG | 2 cut(s) | 11, 677 |
| BstF5I | GGATG | 1 cut(s) | 530 |
| BstFNI | CGCG | 1 cut(s) | 1216 |
| BstH2I | RGCGCY | 1 cut(s) | 494 |
| BstHHI | GCGC | 1 cut(s) | 493 |
| BstMAI | GTCTC | 2 cut(s) | 96, 667 |
| BstMCI | CGRYCG | 1 cut(s) | 1075 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 142, 499, 1331, 1375 |
| BstNI | CCWGG | 2 cut(s) | 38, 959 |
| BstNSI | RCATGY | 2 cut(s) | 509, 972 |
| BstSCI | CCNGG | 3 cut(s) | 36, 895, 957 |
| BstUI | CGCG | 1 cut(s) | 1216 |
| BstV1I | GCAGC | 2 cut(s) | 928, 1334 |
| BstX2I | RGATCY | 3 cut(s) | 346, 405, 1115 |
| BstYI | RGATCY | 3 cut(s) | 346, 405, 1115 |
| BsuRI | GGCC | 5 cut(s) | 145, 760, 957, 1146, 1422 |
| BtsCI | GGATG | 1 cut(s) | 530 |
| BtsIMutI | CAGTG | 4 cut(s) | 325, 737, 1222, 1403 |
| BveI | ACCTGC | 1 cut(s) | 1339 |
| CfoI | GCGC | 1 cut(s) | 493 |
| Cfr13I | GGNCC | 3 cut(s) | 34, 72, 759 |
| CseI | GACGC | 1 cut(s) | 1142 |
| Csp6I | GTAC | 1 cut(s) | 509 |
| CviAII | CATG | 5 cut(s) | 381, 467, 506, 832, 969 |
| CviQI | GTAC | 1 cut(s) | 509 |
| DdeI | CTNAG | 2 cut(s) | 11, 677 |
| EaeI | YGGCCR | 1 cut(s) | 1144 |
| Eco130I | CCWWGG | 1 cut(s) | 647 |
| Eco147I | AGGCCT | 1 cut(s) | 957 |
| Eco47I | GGWCC | 2 cut(s) | 34, 72 |
| Eco47III | AGCGCT | 1 cut(s) | 492 |
| Eco57I | CTGAAG | 1 cut(s) | 301 |
| EcoO109I | RGGNCCY | 1 cut(s) | 34 |
| EcoRII | CCWGG | 2 cut(s) | 36, 957 |
| EcoT14I | CCWWGG | 1 cut(s) | 647 |
| ErhI | CCWWGG | 1 cut(s) | 647 |
| FaeI | CATG | 5 cut(s) | 384, 470, 509, 835, 972 |
| FaqI | GGGAC | 1 cut(s) | 258 |
| FatI | CATG | 5 cut(s) | 380, 466, 505, 831, 968 |
| FauNDI | CATATG | 2 cut(s) | 1149, 1280 |
| FbaI | TGATCA | 1 cut(s) | 1249 |
| Fnu4HI | GCNGC | 2 cut(s) | 942, 1323 |
| FokI | GGATG | 1 cut(s) | 537 |
| Fsp4HI | GCNGC | 2 cut(s) | 942, 1323 |
| FspBI | CTAG | 5 cut(s) | 350, 488, 779, 1352, 1424 |
| GlaI | GCGC | 1 cut(s) | 492 |
| GluI | GCNGC | 2 cut(s) | 942, 1323 |
| GsuI | CTGGAG | 3 cut(s) | 120, 422, 761 |
| HaeII | RGCGCY | 1 cut(s) | 494 |
| HaeIII | GGCC | 5 cut(s) | 145, 760, 957, 1146, 1422 |
| HapII | CCGG | 1 cut(s) | 897 |
| HgaI | GACGC | 1 cut(s) | 1142 |
| HhaI | GCGC | 1 cut(s) | 493 |
| Hin1II | CATG | 5 cut(s) | 384, 470, 509, 835, 972 |
| Hin6I | GCGC | 1 cut(s) | 491 |
| HinP1I | GCGC | 1 cut(s) | 491 |
| HincII | GTYRAC | 1 cut(s) | 640 |
| HindII | GTYRAC | 1 cut(s) | 640 |
| HinfI | GANTC | 8 cut(s) | 7, 89, 225, 293, 556, 685, 734, 1400 |
| HpaII | CCGG | 1 cut(s) | 897 |
| HphI | GGTGA | 1 cut(s) | 1265 |
| Hpy166II | GTNNAC | 3 cut(s) | 199, 640, 1273 |
| Hpy188I | TCNGA | 7 cut(s) | 175, 544, 867, 912, 1113, 1158, 1177 |
| Hpy188III | TCNNGA | 8 cut(s) | 99, 212, 303, 401, 473, 560, 689, 1446 |
| Hpy8I | GTNNAC | 3 cut(s) | 199, 640, 1273 |
| Hpy99I | CGWCG | 1 cut(s) | 1378 |
| HpyAV | CCTTC | 1 cut(s) | 925 |
| HpyCH4III | ACNGT | 5 cut(s) | 479, 818, 1130, 1208, 1226 |
| HpyCH4IV | ACGT | 3 cut(s) | 247, 271, 1416 |
| HpyCH4V | TGCA | 5 cut(s) | 160, 185, 384, 669, 974 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 142, 499, 1331, 1375 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 677 |
| HpySE526I | ACGT | 3 cut(s) | 247, 271, 1416 |
| Hsp92II | CATG | 5 cut(s) | 384, 470, 509, 835, 972 |
| HspAI | GCGC | 1 cut(s) | 491 |
| Ksp22I | TGATCA | 1 cut(s) | 1249 |
| LmnI | GCTCC | 1 cut(s) | 1330 |
| Lsp1109I | GCAGC | 2 cut(s) | 928, 1334 |
| LweI | GCATC | 1 cut(s) | 413 |
| MaeI | CTAG | 5 cut(s) | 350, 488, 779, 1352, 1424 |
| MaeII | ACGT | 3 cut(s) | 247, 271, 1416 |
| MaeIII | GTNAC | 4 cut(s) | 390, 473, 599, 812 |
| MboII | GAAGA | 4 cut(s) | 16, 531, 850, 1400 |
| MfeI | CAATTG | 2 cut(s) | 1140, 1383 |
| MflI | RGATCY | 3 cut(s) | 346, 405, 1115 |
| MlsI | TGGCCA | 1 cut(s) | 1146 |
| MluNI | TGGCCA | 1 cut(s) | 1146 |
| MlyI | GAGTC | 1 cut(s) | 565 |
| MmeI | TCCRAC | 3 cut(s) | 144, 324, 1157 |
| Mox20I | TGGCCA | 1 cut(s) | 1146 |
| MroXI | GAANNNNTTC | 1 cut(s) | 917 |
| MscI | TGGCCA | 1 cut(s) | 1146 |
| MseI | TTAA | 2 cut(s) | 281, 578 |
| MslI | CAYNNNNRTG | 2 cut(s) | 471, 967 |
| Msp20I | TGGCCA | 1 cut(s) | 1146 |
| MspI | CCGG | 1 cut(s) | 897 |
| MspR9I | CCNGG | 3 cut(s) | 38, 897, 959 |
| MunI | CAATTG | 2 cut(s) | 1140, 1383 |
| MvaI | CCWGG | 2 cut(s) | 38, 959 |
| MvnI | CGCG | 1 cut(s) | 1216 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 142, 499, 1331, 1375 |
| NciI | CCSGG | 1 cut(s) | 897 |
| NdeI | CATATG | 2 cut(s) | 1149, 1280 |
| NlaIII | CATG | 5 cut(s) | 384, 470, 509, 835, 972 |
| NlaIV | GGNNCC | 2 cut(s) | 909, 920 |
| NmeAIII | GCCGAG | 1 cut(s) | 606 |
| NmuCI | GTSAC | 1 cut(s) | 473 |
| NspI | RCATGY | 2 cut(s) | 509, 972 |
| PaqCI | CACCTGC | 1 cut(s) | 1339 |
| PceI | AGGCCT | 1 cut(s) | 957 |
| PciI | ACATGT | 2 cut(s) | 505, 968 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1370 |
| PdmI | GAANNNNTTC | 1 cut(s) | 917 |
| PfeI | GAWTC | 7 cut(s) | 7, 89, 225, 293, 685, 734, 1400 |
| PkrI | GCNGC | 2 cut(s) | 943, 1324 |
| Ple19I | CGATCG | 1 cut(s) | 1075 |
| PleI | GAGTC | 1 cut(s) | 564 |
| PpsI | GAGTC | 1 cut(s) | 564 |
| Ppu21I | YACGTR | 1 cut(s) | 272 |
| PpuMI | RGGWCCY | 1 cut(s) | 34 |
| PscI | ACATGT | 2 cut(s) | 505, 968 |
| Psp5II | RGGWCCY | 1 cut(s) | 34 |
| Psp6I | CCWGG | 2 cut(s) | 36, 957 |
| PspGI | CCWGG | 2 cut(s) | 36, 957 |
| PspN4I | GGNNCC | 2 cut(s) | 909, 920 |
| PspPI | GGNCC | 3 cut(s) | 34, 72, 759 |
| PspPPI | RGGWCCY | 1 cut(s) | 34 |
| PsuI | RGATCY | 3 cut(s) | 346, 405, 1115 |
| PvuI | CGATCG | 1 cut(s) | 1075 |
| RsaI | GTAC | 1 cut(s) | 510 |
| RsaNI | GTAC | 1 cut(s) | 509 |
| RseI | CAYNNNNRTG | 2 cut(s) | 471, 967 |
| SaqAI | TTAA | 2 cut(s) | 281, 578 |
| SatI | GCNGC | 2 cut(s) | 942, 1323 |
| Sau96I | GGNCC | 3 cut(s) | 34, 72, 759 |
| SchI | GAGTC | 1 cut(s) | 565 |
| ScrFI | CCNGG | 3 cut(s) | 38, 897, 959 |
| SfaNI | GCATC | 1 cut(s) | 413 |
| SinI | GGWCC | 2 cut(s) | 34, 72 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 471, 967 |
| SmlI | CTYRAG | 2 cut(s) | 595, 710 |
| SmoI | CTYRAG | 2 cut(s) | 595, 710 |
| SseBI | AGGCCT | 1 cut(s) | 957 |
| SspI | AATATT | 3 cut(s) | 208, 850, 1301 |
| SspMI | CTAG | 5 cut(s) | 350, 488, 779, 1352, 1424 |
| StuI | AGGCCT | 1 cut(s) | 957 |
| StyD4I | CCNGG | 3 cut(s) | 36, 895, 957 |
| StyI | CCWWGG | 1 cut(s) | 647 |
| TaaI | ACNGT | 5 cut(s) | 479, 818, 1130, 1208, 1226 |
| TaiI | ACGT | 3 cut(s) | 250, 274, 1419 |
| TaqI | TCGA | 3 cut(s) | 654, 1075, 1228 |
| TatI | WGTACW | 1 cut(s) | 508 |
| TfiI | GAWTC | 7 cut(s) | 7, 89, 225, 293, 685, 734, 1400 |
| Tru1I | TTAA | 2 cut(s) | 281, 578 |
| Tru9I | TTAA | 2 cut(s) | 281, 578 |
| TscAI | CASTG | 4 cut(s) | 325, 744, 1229, 1410 |
| TseFI | GTSAC | 1 cut(s) | 473 |
| TseI | GCWGC | 2 cut(s) | 941, 1322 |
| Tsp45I | GTSAC | 1 cut(s) | 473 |
| TspDTI | ATGAA | 8 cut(s) | 17, 102, 290, 538, 963, 1194, 1271, 1311 |
| TspGWI | ACGGA | 1 cut(s) | 159 |
| TspRI | CASTG | 4 cut(s) | 325, 744, 1229, 1410 |
| VpaK11BI | GGWCC | 2 cut(s) | 34, 72 |
| XapI | RAATTY | 3 cut(s) | 253, 277, 632 |
| XceI | RCATGY | 2 cut(s) | 509, 972 |
| XmnI | GAANNNNTTC | 1 cut(s) | 917 |
| XspI | CTAG | 5 cut(s) | 350, 488, 779, 1352, 1424 |