TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 227 |
| AccBSI | CCGCTC | 1 cut(s) | 817 |
| AciI | CCGC | 7 cut(s) | 815, 1052, 1155, 1473, 1516, 1805, 1878 |
| AcsI | RAATTY | 9 cut(s) | 400, 496, 692, 1019, 1065, 1169, 1284, 1559, 1653 |
| AcuI | CTGAAG | 1 cut(s) | 836 |
| AcyI | GRCGYC | 1 cut(s) | 1801 |
| AdeI | CACNNNGTG | 1 cut(s) | 1891 |
| AfaI | GTAC | 2 cut(s) | 187, 1671 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 539, 874, 1356 |
| AflII | CTTAAG | 1 cut(s) | 590 |
| AhlI | ACTAGT | 4 cut(s) | 343, 1036, 1145, 1672 |
| AjnI | CCWGG | 3 cut(s) | 295, 1865, 1887 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1589, 1621 |
| AleI | CACNNNNGTG | 1 cut(s) | 792 |
| Alw26I | GTCTC | 2 cut(s) | 649, 1354 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1339 |
| Ama87I | CYCGRG | 1 cut(s) | 572 |
| AoxI | GGCC | 1 cut(s) | 293 |
| ApeKI | GCWGC | 3 cut(s) | 1744, 1807, 1875 |
| ApoI | RAATTY | 9 cut(s) | 400, 496, 692, 1019, 1065, 1169, 1284, 1559, 1653 |
| AseI | ATTAAT | 1 cut(s) | 234 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 36 |
| AsuHPI | GGTGA | 6 cut(s) | 42, 913, 1007, 1787, 1877, 1903 |
| AsuII | TTCGAA | 1 cut(s) | 1047 |
| AvaI | CYCGRG | 1 cut(s) | 572 |
| BanII | GRGCYC | 1 cut(s) | 1735 |
| BauI | CACGAG | 2 cut(s) | 1184, 1734 |
| BbsI | GAAGAC | 2 cut(s) | 1142, 1640 |
| BbvI | GCAGC | 3 cut(s) | 1731, 1794, 1862 |
| BccI | CCATC | 3 cut(s) | 328, 682, 734 |
| BceAI | ACGGC | 1 cut(s) | 970 |
| BciT130I | CCWGG | 3 cut(s) | 297, 1867, 1889 |
| BclI | TGATCA | 1 cut(s) | 1009 |
| BcoDI | GTCTC | 2 cut(s) | 649, 1354 |
| BcuI | ACTAGT | 4 cut(s) | 343, 1036, 1145, 1672 |
| BfaI | CTAG | 5 cut(s) | 344, 1037, 1146, 1673, 1952 |
| BfrI | CTTAAG | 1 cut(s) | 590 |
| BisI | GCNGC | 3 cut(s) | 1745, 1808, 1876 |
| BlpI | GCTNAGC | 1 cut(s) | 818 |
| BlsI | GCNGC | 3 cut(s) | 1746, 1809, 1877 |
| BmcAI | AGTACT | 2 cut(s) | 187, 1671 |
| Bme1390I | CCNGG | 3 cut(s) | 297, 1867, 1889 |
| BmeT110I | CYCGRG | 1 cut(s) | 572 |
| BmiI | GGNNCC | 1 cut(s) | 284 |
| BmrFI | CCNGG | 3 cut(s) | 297, 1867, 1889 |
| BmrI | ACTGGG | 1 cut(s) | 132 |
| BmsI | GCATC | 6 cut(s) | 49, 153, 165, 381, 1049, 1884 |
| BmuI | ACTGGG | 1 cut(s) | 132 |
| BpiI | GAAGAC | 2 cut(s) | 1142, 1640 |
| BpmI | CTGGAG | 3 cut(s) | 35, 270, 1378 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 818 |
| Bpu14I | TTCGAA | 1 cut(s) | 1047 |
| BpuEI | CTTGAG | 2 cut(s) | 202, 680 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1008 |
| BsaHI | GRCGYC | 1 cut(s) | 1801 |
| BsaJI | CCNNGG | 1 cut(s) | 1865 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 539, 874, 1356 |
| Bse1I | ACTGG | 3 cut(s) | 127, 274, 296 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1008 |
| BseBI | CCWGG | 3 cut(s) | 297, 1867, 1889 |
| BseDI | CCNNGG | 1 cut(s) | 1865 |
| BseGI | GGATG | 5 cut(s) | 320, 529, 693, 797, 1064 |
| BseJI | GATNNNNATC | 1 cut(s) | 1008 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 539, 874, 1356 |
| BseMII | CTCAG | 3 cut(s) | 397, 513, 832 |
| BseNI | ACTGG | 3 cut(s) | 127, 274, 296 |
| BseRI | GAGGAG | 1 cut(s) | 1693 |
| BseXI | GCAGC | 3 cut(s) | 1731, 1794, 1862 |
| BseYI | CCCAGC | 1 cut(s) | 304 |
| BsgI | GTGCAG | 1 cut(s) | 1730 |
| BshFI | GGCC | 1 cut(s) | 295 |
| BsiHKCI | CYCGRG | 1 cut(s) | 572 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 539, 874, 1356 |
| BsmAI | GTCTC | 2 cut(s) | 649, 1354 |
| BsmI | GAATGC | 2 cut(s) | 197, 1475 |
| BsnI | GGCC | 1 cut(s) | 295 |
| BsoBI | CYCGRG | 1 cut(s) | 572 |
| Bsp119I | TTCGAA | 1 cut(s) | 1047 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1735 |
| Bsp143I | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 818 |
| BspACI | CCGC | 7 cut(s) | 815, 1052, 1155, 1473, 1516, 1805, 1878 |
| BspANI | GGCC | 1 cut(s) | 295 |
| BspCNI | CTCAG | 3 cut(s) | 396, 514, 831 |
| BspHI | TCATGA | 1 cut(s) | 88 |
| BspLI | GGNNCC | 1 cut(s) | 284 |
| BspT104I | TTCGAA | 1 cut(s) | 1047 |
| BspTI | CTTAAG | 1 cut(s) | 590 |
| BsrBI | CCGCTC | 1 cut(s) | 817 |
| BsrI | ACTGG | 3 cut(s) | 127, 274, 296 |
| BssECI | CCNNGG | 1 cut(s) | 1865 |
| BssMI | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| BssNI | GRCGYC | 1 cut(s) | 1801 |
| BssSI | CACGAG | 2 cut(s) | 1184, 1734 |
| Bst2BI | CACGAG | 2 cut(s) | 1184, 1734 |
| Bst2UI | CCWGG | 3 cut(s) | 297, 1867, 1889 |
| Bst4CI | ACNGT | 7 cut(s) | 368, 911, 995, 1076, 1251, 1365, 1554 |
| Bst6I | CTCTTC | 2 cut(s) | 1448, 1902 |
| BstACI | GRCGYC | 1 cut(s) | 1801 |
| BstAFI | CTTAAG | 1 cut(s) | 590 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstBI | TTCGAA | 1 cut(s) | 1047 |
| BstC8I | GCNNGC | 4 cut(s) | 64, 241, 1159, 1624 |
| BstDEI | CTNAG | 4 cut(s) | 383, 422, 522, 818 |
| BstF5I | GGATG | 5 cut(s) | 320, 529, 693, 797, 1064 |
| BstKTI | GATC | 6 cut(s) | 760, 1012, 1126, 1423, 1441, 1996 |
| BstMAI | GTCTC | 2 cut(s) | 649, 1354 |
| BstMBI | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 10, 72, 1163, 1807 |
| BstNI | CCWGG | 3 cut(s) | 297, 1867, 1889 |
| BstSCI | CCNGG | 3 cut(s) | 295, 1865, 1887 |
| BstV1I | GCAGC | 3 cut(s) | 1731, 1794, 1862 |
| BstV2I | GAAGAC | 2 cut(s) | 1142, 1640 |
| BsuRI | GGCC | 1 cut(s) | 295 |
| BtsCI | GGATG | 5 cut(s) | 320, 529, 693, 797, 1064 |
| BtsIMutI | CAGTG | 2 cut(s) | 1340, 1486 |
| Cac8I | GCNNGC | 4 cut(s) | 64, 241, 1159, 1624 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1339 |
| CciI | TCATGA | 1 cut(s) | 88 |
| CseI | GACGC | 2 cut(s) | 1099, 1790 |
| CsiI | ACCWGGT | 1 cut(s) | 1887 |
| Csp6I | GTAC | 2 cut(s) | 186, 1670 |
| CviQI | GTAC | 2 cut(s) | 186, 1670 |
| DdeI | CTNAG | 4 cut(s) | 383, 422, 522, 818 |
| DpnI | GATC | 6 cut(s) | 759, 1011, 1125, 1422, 1440, 1995 |
| DpnII | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| DraI | TTTAAA | 1 cut(s) | 199 |
| DraIII | CACNNNGTG | 1 cut(s) | 1891 |
| Eam1104I | CTCTTC | 2 cut(s) | 1448, 1902 |
| EarI | CTCTTC | 2 cut(s) | 1448, 1902 |
| Eco24I | GRGCYC | 1 cut(s) | 1735 |
| Eco57I | CTGAAG | 1 cut(s) | 836 |
| Eco88I | CYCGRG | 1 cut(s) | 572 |
| EcoRI | GAATTC | 1 cut(s) | 692 |
| EcoRII | CCWGG | 3 cut(s) | 295, 1865, 1887 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 1735 |
| FauI | CCCGC | 1 cut(s) | 1162 |
| FbaI | TGATCA | 1 cut(s) | 1009 |
| Fnu4HI | GCNGC | 3 cut(s) | 1745, 1808, 1876 |
| FokI | GGATG | 5 cut(s) | 307, 516, 700, 804, 1071 |
| FriOI | GRGCYC | 1 cut(s) | 1735 |
| Fsp4HI | GCNGC | 3 cut(s) | 1745, 1808, 1876 |
| FspBI | CTAG | 5 cut(s) | 344, 1037, 1146, 1673, 1952 |
| GluI | GCNGC | 3 cut(s) | 1745, 1808, 1876 |
| GsaI | CCCAGC | 1 cut(s) | 308 |
| GsuI | CTGGAG | 3 cut(s) | 35, 270, 1378 |
| HaeIII | GGCC | 1 cut(s) | 295 |
| HgaI | GACGC | 2 cut(s) | 1099, 1790 |
| Hin1I | GRCGYC | 1 cut(s) | 1801 |
| HincII | GTYRAC | 2 cut(s) | 613, 1726 |
| HindII | GTYRAC | 2 cut(s) | 613, 1726 |
| HindIII | AAGCTT | 2 cut(s) | 554, 1118 |
| HinfI | GANTC | 8 cut(s) | 47, 300, 393, 543, 808, 847, 1469, 1713 |
| HphI | GGTGA | 6 cut(s) | 42, 913, 1007, 1787, 1877, 1903 |
| Hpy166II | GTNNAC | 6 cut(s) | 562, 613, 1034, 1042, 1726, 1885 |
| Hpy8I | GTNNAC | 6 cut(s) | 562, 613, 1034, 1042, 1726, 1885 |
| Hpy99I | CGWCG | 1 cut(s) | 2001 |
| HpyAV | CCTTC | 6 cut(s) | 543, 678, 750, 1049, 1127, 1586 |
| HpyCH4III | ACNGT | 7 cut(s) | 368, 911, 995, 1076, 1251, 1365, 1554 |
| HpyCH4IV | ACGT | 2 cut(s) | 70, 929 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 10, 72, 1163, 1807 |
| HpyF3I | CTNAG | 4 cut(s) | 383, 422, 522, 818 |
| HpySE526I | ACGT | 2 cut(s) | 70, 929 |
| Hsp92I | GRCGYC | 1 cut(s) | 1801 |
| Ksp22I | TGATCA | 1 cut(s) | 1009 |
| Kzo9I | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| Lsp1109I | GCAGC | 3 cut(s) | 1731, 1794, 1862 |
| LweI | GCATC | 6 cut(s) | 49, 153, 165, 381, 1049, 1884 |
| MabI | ACCWGGT | 1 cut(s) | 1887 |
| MaeI | CTAG | 5 cut(s) | 344, 1037, 1146, 1673, 1952 |
| MaeII | ACGT | 2 cut(s) | 70, 929 |
| MaeIII | GTNAC | 5 cut(s) | 48, 525, 983, 1087, 1828 |
| MalI | GATC | 6 cut(s) | 759, 1011, 1125, 1422, 1440, 1995 |
| MbiI | CCGCTC | 1 cut(s) | 817 |
| MboI | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| MfeI | CAATTG | 1 cut(s) | 747 |
| MhlI | GDGCHC | 1 cut(s) | 1735 |
| MlyI | GAGTC | 2 cut(s) | 56, 1478 |
| MmeI | TCCRAC | 3 cut(s) | 348, 520, 950 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 36 |
| MslI | CAYNNNNRTG | 4 cut(s) | 93, 710, 792, 993 |
| MspA1I | CMGCKG | 2 cut(s) | 1524, 1807 |
| MspCI | CTTAAG | 1 cut(s) | 590 |
| MspR9I | CCNGG | 3 cut(s) | 297, 1867, 1889 |
| MunI | CAATTG | 1 cut(s) | 747 |
| Mva1269I | GAATGC | 2 cut(s) | 197, 1475 |
| MvaI | CCWGG | 3 cut(s) | 297, 1867, 1889 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 10, 72, 1163, 1807 |
| NdeII | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| NlaIV | GGNNCC | 1 cut(s) | 284 |
| NmuCI | GTSAC | 2 cut(s) | 48, 1087 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspV | TTCGAA | 1 cut(s) | 1047 |
| OliI | CACNNNNGTG | 1 cut(s) | 792 |
| PaeR7I | CTCGAG | 1 cut(s) | 572 |
| PagI | TCATGA | 1 cut(s) | 88 |
| PctI | GAATGC | 2 cut(s) | 197, 1475 |
| PdmI | GAANNNNTTC | 1 cut(s) | 36 |
| PfeI | GAWTC | 6 cut(s) | 300, 393, 543, 808, 847, 1713 |
| PkrI | GCNGC | 3 cut(s) | 1746, 1809, 1877 |
| PleI | GAGTC | 2 cut(s) | 55, 1477 |
| PpsI | GAGTC | 2 cut(s) | 55, 1477 |
| PshBI | ATTAAT | 1 cut(s) | 234 |
| PsiI | TTATAA | 1 cut(s) | 227 |
| Psp6I | CCWGG | 3 cut(s) | 295, 1865, 1887 |
| PspFI | CCCAGC | 1 cut(s) | 304 |
| PspGI | CCWGG | 3 cut(s) | 295, 1865, 1887 |
| PspN4I | GGNNCC | 1 cut(s) | 284 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1339 |
| PvuII | CAGCTG | 1 cut(s) | 1524 |
| RsaI | GTAC | 2 cut(s) | 187, 1671 |
| RsaNI | GTAC | 2 cut(s) | 186, 1670 |
| RseI | CAYNNNNRTG | 4 cut(s) | 93, 710, 792, 993 |
| SatI | GCNGC | 3 cut(s) | 1745, 1808, 1876 |
| Sau3AI | GATC | 6 cut(s) | 757, 1009, 1123, 1420, 1438, 1993 |
| ScaI | AGTACT | 2 cut(s) | 187, 1671 |
| SchI | GAGTC | 2 cut(s) | 56, 1478 |
| ScrFI | CCNGG | 3 cut(s) | 297, 1867, 1889 |
| SduI | GDGCHC | 1 cut(s) | 1735 |
| SexAI | ACCWGGT | 1 cut(s) | 1887 |
| SfaNI | GCATC | 6 cut(s) | 49, 153, 165, 381, 1049, 1884 |
| Sfr274I | CTCGAG | 1 cut(s) | 572 |
| SfuI | TTCGAA | 1 cut(s) | 1047 |
| SlaI | CTCGAG | 1 cut(s) | 572 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 93, 710, 792, 993 |
| SmlI | CTYRAG | 4 cut(s) | 181, 572, 590, 659 |
| SmoI | CTYRAG | 4 cut(s) | 181, 572, 590, 659 |
| SpeI | ACTAGT | 4 cut(s) | 343, 1036, 1145, 1672 |
| SsiI | CCGC | 7 cut(s) | 815, 1052, 1155, 1473, 1516, 1805, 1878 |
| SspMI | CTAG | 5 cut(s) | 344, 1037, 1146, 1673, 1952 |
| StyD4I | CCNGG | 3 cut(s) | 295, 1865, 1887 |
| TaaI | ACNGT | 7 cut(s) | 368, 911, 995, 1076, 1251, 1365, 1554 |
| TaiI | ACGT | 2 cut(s) | 73, 932 |
| TaqI | TCGA | 5 cut(s) | 573, 1047, 1549, 1825, 1996 |
| TaqII | GACCGA | 2 cut(s) | 1364, 1691 |
| TatI | WGTACW | 2 cut(s) | 185, 1669 |
| TfiI | GAWTC | 6 cut(s) | 300, 393, 543, 808, 847, 1713 |
| TscAI | CASTG | 2 cut(s) | 1340, 1486 |
| TseFI | GTSAC | 2 cut(s) | 48, 1087 |
| TseI | GCWGC | 3 cut(s) | 1744, 1807, 1875 |
| Tsp45I | GTSAC | 2 cut(s) | 48, 1087 |
| TspGWI | ACGGA | 3 cut(s) | 804, 1746, 1958 |
| TspRI | CASTG | 2 cut(s) | 1340, 1486 |
| Vha464I | CTTAAG | 1 cut(s) | 590 |
| VspI | ATTAAT | 1 cut(s) | 234 |
| XapI | RAATTY | 9 cut(s) | 400, 496, 692, 1019, 1065, 1169, 1284, 1559, 1653 |
| XhoI | CTCGAG | 1 cut(s) | 572 |
| XmnI | GAANNNNTTC | 1 cut(s) | 36 |
| XspI | CTAG | 5 cut(s) | 344, 1037, 1146, 1673, 1952 |
| ZrmI | AGTACT | 2 cut(s) | 187, 1671 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |