TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 708 |
| AatII | GACGTC | 1 cut(s) | 339 |
| AclWI | GGATC | 3 cut(s) | 414, 532, 545 |
| AcsI | RAATTY | 5 cut(s) | 46, 128, 215, 238, 508 |
| AcyI | GRCGYC | 1 cut(s) | 336 |
| AfaI | GTAC | 1 cut(s) | 684 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 660 |
| AgsI | TTSAA | 6 cut(s) | 127, 215, 227, 244, 440, 611 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 245, 277 |
| AluBI | AGCT | 5 cut(s) | 180, 292, 531, 580, 696 |
| AluI | AGCT | 5 cut(s) | 180, 292, 531, 580, 696 |
| Alw26I | GTCTC | 2 cut(s) | 28, 371 |
| AlwI | GGATC | 3 cut(s) | 414, 532, 545 |
| AoxI | GGCC | 2 cut(s) | 264, 516 |
| ApeKI | GCWGC | 1 cut(s) | 713 |
| ApoI | RAATTY | 5 cut(s) | 46, 128, 215, 238, 508 |
| AseI | ATTAAT | 1 cut(s) | 495 |
| AspS9I | GGNCC | 2 cut(s) | 265, 516 |
| AsuHPI | GGTGA | 2 cut(s) | 360, 592 |
| BamHI | GGATCC | 1 cut(s) | 537 |
| BbsI | GAAGAC | 1 cut(s) | 570 |
| BccI | CCATC | 4 cut(s) | 7, 52, 380, 630 |
| BcoDI | GTCTC | 2 cut(s) | 28, 371 |
| BfmI | CTRYAG | 2 cut(s) | 419, 697 |
| BisI | GCNGC | 1 cut(s) | 714 |
| BlsI | GCNGC | 1 cut(s) | 715 |
| BmgT120I | GGNCC | 2 cut(s) | 265, 516 |
| BmiI | GGNNCC | 3 cut(s) | 165, 517, 539 |
| BmsI | GCATC | 1 cut(s) | 211 |
| BpiI | GAAGAC | 1 cut(s) | 570 |
| BpmI | CTGGAG | 1 cut(s) | 52 |
| BsaHI | GRCGYC | 1 cut(s) | 336 |
| BsaJI | CCNNGG | 1 cut(s) | 195 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 25, 55 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 660 |
| Bse1I | ACTGG | 1 cut(s) | 146 |
| Bse3DI | GCAATG | 1 cut(s) | 464 |
| BseDI | CCNNGG | 1 cut(s) | 195 |
| BseGI | GGATG | 1 cut(s) | 641 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 660 |
| BseMI | GCAATG | 1 cut(s) | 464 |
| BseMII | CTCAG | 2 cut(s) | 68, 131 |
| BseNI | ACTGG | 1 cut(s) | 146 |
| BseRI | GAGGAG | 1 cut(s) | 23 |
| BsgI | GTGCAG | 1 cut(s) | 609 |
| BshFI | GGCC | 2 cut(s) | 266, 518 |
| BslFI | GGGAC | 1 cut(s) | 653 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 660 |
| BsmAI | GTCTC | 2 cut(s) | 28, 371 |
| BsmFI | GGGAC | 1 cut(s) | 653 |
| BsnI | GGCC | 2 cut(s) | 266, 518 |
| Bsp1407I | TGTACA | 1 cut(s) | 682 |
| Bsp143I | GATC | 3 cut(s) | 91, 406, 537 |
| BspANI | GGCC | 2 cut(s) | 266, 518 |
| BspCNI | CTCAG | 2 cut(s) | 67, 130 |
| BspLI | GGNNCC | 3 cut(s) | 165, 517, 539 |
| BspPI | GGATC | 3 cut(s) | 414, 532, 545 |
| BsrDI | GCAATG | 1 cut(s) | 464 |
| BsrGI | TGTACA | 1 cut(s) | 682 |
| BsrI | ACTGG | 1 cut(s) | 146 |
| BssECI | CCNNGG | 1 cut(s) | 195 |
| BssMI | GATC | 3 cut(s) | 91, 406, 537 |
| BssNI | GRCGYC | 1 cut(s) | 336 |
| BssT1I | CCWWGG | 1 cut(s) | 195 |
| Bst4CI | ACNGT | 3 cut(s) | 210, 384, 423 |
| Bst6I | CTCTTC | 1 cut(s) | 101 |
| BstACI | GRCGYC | 1 cut(s) | 336 |
| BstAUI | TGTACA | 1 cut(s) | 682 |
| BstC8I | GCNNGC | 1 cut(s) | 520 |
| BstDEI | CTNAG | 2 cut(s) | 54, 117 |
| BstF5I | GGATG | 1 cut(s) | 641 |
| BstKTI | GATC | 3 cut(s) | 94, 409, 540 |
| BstMAI | GTCTC | 2 cut(s) | 28, 371 |
| BstMBI | GATC | 3 cut(s) | 91, 406, 537 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 59, 466, 528 |
| BstSFI | CTRYAG | 2 cut(s) | 419, 697 |
| BstV2I | GAAGAC | 1 cut(s) | 570 |
| BstX2I | RGATCY | 1 cut(s) | 537 |
| BstYI | RGATCY | 1 cut(s) | 537 |
| BsuRI | GGCC | 2 cut(s) | 266, 518 |
| BtsCI | GGATG | 1 cut(s) | 641 |
| Cac8I | GCNNGC | 1 cut(s) | 520 |
| Cfr13I | GGNCC | 2 cut(s) | 265, 516 |
| CseI | GACGC | 2 cut(s) | 95, 449 |
| Csp6I | GTAC | 1 cut(s) | 683 |
| CviAII | CATG | 1 cut(s) | 410 |
| CviJI | RGCY | 9 cut(s) | 53, 180, 266, 292, 418, 518, 531, 580, 696 |
| CviKI_1 | RGCY | 9 cut(s) | 53, 180, 266, 292, 418, 518, 531, 580, 696 |
| CviQI | GTAC | 1 cut(s) | 683 |
| DdeI | CTNAG | 2 cut(s) | 54, 117 |
| DpnI | GATC | 3 cut(s) | 93, 408, 539 |
| DpnII | GATC | 3 cut(s) | 91, 406, 537 |
| Eam1104I | CTCTTC | 1 cut(s) | 101 |
| EarI | CTCTTC | 1 cut(s) | 101 |
| Eco130I | CCWWGG | 1 cut(s) | 195 |
| EcoO109I | RGGNCCY | 1 cut(s) | 516 |
| EcoRI | GAATTC | 1 cut(s) | 508 |
| EcoT14I | CCWWGG | 1 cut(s) | 195 |
| ErhI | CCWWGG | 1 cut(s) | 195 |
| FaeI | CATG | 1 cut(s) | 413 |
| FaqI | GGGAC | 1 cut(s) | 653 |
| FatI | CATG | 1 cut(s) | 409 |
| Fnu4HI | GCNGC | 1 cut(s) | 714 |
| FokI | GGATG | 1 cut(s) | 648 |
| Fsp4HI | GCNGC | 1 cut(s) | 714 |
| GluI | GCNGC | 1 cut(s) | 714 |
| GsuI | CTGGAG | 1 cut(s) | 52 |
| HaeIII | GGCC | 2 cut(s) | 266, 518 |
| HgaI | GACGC | 2 cut(s) | 95, 449 |
| Hin1I | GRCGYC | 1 cut(s) | 336 |
| Hin1II | CATG | 1 cut(s) | 413 |
| HinfI | GANTC | 6 cut(s) | 36, 105, 191, 401, 486, 614 |
| HphI | GGTGA | 2 cut(s) | 360, 592 |
| Hpy166II | GTNNAC | 1 cut(s) | 85 |
| Hpy188I | TCNGA | 2 cut(s) | 57, 406 |
| Hpy188III | TCNNGA | 2 cut(s) | 102, 376 |
| Hpy8I | GTNNAC | 1 cut(s) | 85 |
| HpyCH4III | ACNGT | 3 cut(s) | 210, 384, 423 |
| HpyCH4IV | ACGT | 2 cut(s) | 336, 567 |
| HpyCH4V | TGCA | 3 cut(s) | 236, 590, 713 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 59, 466, 528 |
| HpyF3I | CTNAG | 2 cut(s) | 54, 117 |
| HpySE526I | ACGT | 2 cut(s) | 336, 567 |
| Hsp92I | GRCGYC | 1 cut(s) | 336 |
| Hsp92II | CATG | 1 cut(s) | 413 |
| Kzo9I | GATC | 3 cut(s) | 91, 406, 537 |
| LpnPI | CCDG | 5 cut(s) | 16, 159, 243, 498, 532 |
| LweI | GCATC | 1 cut(s) | 211 |
| MaeII | ACGT | 2 cut(s) | 336, 567 |
| MalI | GATC | 3 cut(s) | 93, 408, 539 |
| MboI | GATC | 3 cut(s) | 91, 406, 537 |
| MboII | GAAGA | 7 cut(s) | 83, 88, 105, 371, 517, 575, 623 |
| MflI | RGATCY | 1 cut(s) | 537 |
| MluCI | AATT | 9 cut(s) | 25, 46, 122, 128, 135, 215, 238, 508, 643 |
| MlyI | GAGTC | 4 cut(s) | 30, 99, 410, 495 |
| MmeI | TCCRAC | 1 cut(s) | 384 |
| MnlI | CCTC | 6 cut(s) | 73, 154, 278, 608, 622, 654 |
| MseI | TTAA | 3 cut(s) | 477, 495, 524 |
| MspA1I | CMGCKG | 1 cut(s) | 180 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 59, 466, 528 |
| NdeII | GATC | 3 cut(s) | 91, 406, 537 |
| NlaIII | CATG | 1 cut(s) | 413 |
| NlaIV | GGNNCC | 3 cut(s) | 165, 517, 539 |
| PfeI | GAWTC | 2 cut(s) | 191, 614 |
| PflFI | GACNNNGTC | 2 cut(s) | 39, 382 |
| PkrI | GCNGC | 1 cut(s) | 715 |
| PleI | GAGTC | 4 cut(s) | 30, 99, 409, 494 |
| PpsI | GAGTC | 4 cut(s) | 30, 99, 409, 494 |
| PshBI | ATTAAT | 1 cut(s) | 495 |
| PsiI | TTATAA | 1 cut(s) | 708 |
| PspN4I | GGNNCC | 3 cut(s) | 165, 517, 539 |
| PspPI | GGNCC | 2 cut(s) | 265, 516 |
| PsuI | RGATCY | 1 cut(s) | 537 |
| PsyI | GACNNNGTC | 2 cut(s) | 39, 382 |
| PvuII | CAGCTG | 1 cut(s) | 180 |
| RsaI | GTAC | 1 cut(s) | 684 |
| RsaNI | GTAC | 1 cut(s) | 683 |
| SaqAI | TTAA | 3 cut(s) | 477, 495, 524 |
| SatI | GCNGC | 1 cut(s) | 714 |
| Sau3AI | GATC | 3 cut(s) | 91, 406, 537 |
| Sau96I | GGNCC | 2 cut(s) | 265, 516 |
| SchI | GAGTC | 4 cut(s) | 30, 99, 410, 495 |
| SfaNI | GCATC | 1 cut(s) | 211 |
| SfcI | CTRYAG | 2 cut(s) | 419, 697 |
| Sse9I | AATT | 9 cut(s) | 25, 46, 122, 128, 135, 215, 238, 508, 643 |
| StyI | CCWWGG | 1 cut(s) | 195 |
| TaaI | ACNGT | 3 cut(s) | 210, 384, 423 |
| TaiI | ACGT | 2 cut(s) | 339, 570 |
| TaqI | TCGA | 4 cut(s) | 103, 375, 484, 649 |
| TasI | AATT | 9 cut(s) | 25, 46, 122, 128, 135, 215, 238, 508, 643 |
| TatI | WGTACW | 1 cut(s) | 682 |
| TfiI | GAWTC | 2 cut(s) | 191, 614 |
| Tru1I | TTAA | 3 cut(s) | 477, 495, 524 |
| Tru9I | TTAA | 3 cut(s) | 477, 495, 524 |
| TseI | GCWGC | 1 cut(s) | 713 |
| TspDTI | ATGAA | 3 cut(s) | 121, 576, 590 |
| TspGWI | ACGGA | 2 cut(s) | 575, 648 |
| Tth111I | GACNNNGTC | 2 cut(s) | 39, 382 |
| VspI | ATTAAT | 1 cut(s) | 495 |
| XapI | RAATTY | 5 cut(s) | 46, 128, 215, 238, 508 |
| ZraI | GACGTC | 1 cut(s) | 337 |