TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 24 - 192 | 1.5e-54 | TIR domain |
| TIR_2 | PF13676 | 27 - 121 | 1.1e-14 | TIR domain |
| NB-ARC | PF00931 | 203 - 375 | 4e-19 | NB-ARC domain |
| ATPase_2 | PF01637 | 205 - 319 | 1e-06 | ATPase domain predominantly from Archaea |
| WHD_ROQ1 | PF23282 | 446 - 514 | 4.9e-21 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 642 - 832 | 1.6e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 664 - 747 | 4.6e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 26 |
| AccBSI | CCGCTC | 1 cut(s) | 2338 |
| AccI | GTMKAC | 2 cut(s) | 1567, 1843 |
| AccII | CGCG | 2 cut(s) | 106, 1593 |
| AciI | CCGC | 5 cut(s) | 1950, 2027, 2338, 2496, 3014 |
| AclWI | GGATC | 7 cut(s) | 12, 235, 353, 650, 954, 1991, 2019 |
| AcoI | YGGCCR | 1 cut(s) | 2556 |
| AcuI | CTGAAG | 5 cut(s) | 73, 908, 1074, 1672, 2691 |
| AcvI | CACGTG | 1 cut(s) | 2366 |
| AcyI | GRCGYC | 1 cut(s) | 27 |
| AdeI | CACNNNGTG | 1 cut(s) | 854 |
| AfaI | GTAC | 2 cut(s) | 131, 2181 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 23, 1430, 1774, 2594, 2904, 3053 |
| AflII | CTTAAG | 1 cut(s) | 2030 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2062 |
| AjnI | CCWGG | 5 cut(s) | 387, 759, 1543, 1749, 1884 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2673, 2705 |
| AleI | CACNNNNGTG | 1 cut(s) | 1854 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1780, 1812 |
| Alw21I | GWGCWC | 1 cut(s) | 1098 |
| Alw26I | GTCTC | 5 cut(s) | 1439, 1828, 2049, 2154, 2482 |
| AlwI | GGATC | 7 cut(s) | 12, 235, 353, 650, 954, 1991, 2019 |
| AoxI | GGCC | 7 cut(s) | 121, 385, 1455, 1859, 2134, 2556, 3097 |
| ApaI | GGGCCC | 1 cut(s) | 1863 |
| ApeKI | GCWGC | 2 cut(s) | 458, 473 |
| AseI | ATTAAT | 1 cut(s) | 1959 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1344, 1527, 2274 |
| AspLEI | GCGC | 2 cut(s) | 29, 108 |
| AspS9I | GGNCC | 6 cut(s) | 385, 937, 986, 1777, 1859, 1860 |
| AsuHPI | GGTGA | 7 cut(s) | 401, 407, 1385, 1559, 2474, 2577, 2719 |
| AvaII | GGWCC | 3 cut(s) | 937, 986, 1777 |
| BaeGI | GKGCMC | 1 cut(s) | 1863 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2163, 2196 |
| BalI | TGGCCA | 1 cut(s) | 2558 |
| BanI | GGYRCC | 1 cut(s) | 26 |
| BanII | GRGCYC | 2 cut(s) | 1098, 1863 |
| BauI | CACGAG | 2 cut(s) | 612, 2508 |
| BbrPI | CACGTG | 1 cut(s) | 2366 |
| BbsI | GAAGAC | 3 cut(s) | 627, 657, 1515 |
| Bbv12I | GWGCWC | 1 cut(s) | 1098 |
| BbvI | GCAGC | 2 cut(s) | 460, 470 |
| BccI | CCATC | 8 cut(s) | 497, 1643, 1721, 2105, 2191, 2369, 2605, 3078 |
| BceAI | ACGGC | 3 cut(s) | 1050, 2649, 2718 |
| BciT130I | CCWGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| BciVI | GTATCC | 1 cut(s) | 1725 |
| BclI | TGATCA | 1 cut(s) | 3075 |
| BcoDI | GTCTC | 5 cut(s) | 1439, 1828, 2049, 2154, 2482 |
| BfaI | CTAG | 2 cut(s) | 852, 2078 |
| BfoI | RGCGCY | 1 cut(s) | 30 |
| BfrI | CTTAAG | 1 cut(s) | 2030 |
| BfuI | GTATCC | 1 cut(s) | 1725 |
| BglII | AGATCT | 3 cut(s) | 300, 1213, 2080 |
| BisI | GCNGC | 5 cut(s) | 459, 474, 2339, 2497, 3014 |
| BlsI | GCNGC | 5 cut(s) | 460, 475, 2340, 2498, 3015 |
| Bme1390I | CCNGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| Bme18I | GGWCC | 3 cut(s) | 937, 986, 1777 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2062 |
| BmgT120I | GGNCC | 6 cut(s) | 385, 937, 986, 1777, 1859, 1860 |
| BmiI | GGNNCC | 5 cut(s) | 28, 1185, 1778, 1861, 2599 |
| BmrFI | CCNGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| BmsI | GCATC | 6 cut(s) | 64, 275, 388, 1240, 1482, 2961 |
| BpiI | GAAGAC | 3 cut(s) | 627, 657, 1515 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 33, 445, 477 |
| BpmI | CTGGAG | 2 cut(s) | 987, 1949 |
| Bpu10I | CCTNAGC | 1 cut(s) | 413 |
| BsaAI | YACGTR | 1 cut(s) | 2366 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2229 |
| BsaHI | GRCGYC | 1 cut(s) | 27 |
| BsaI | GGTCTC | 1 cut(s) | 1439 |
| BsaJI | CCNNGG | 3 cut(s) | 1543, 1829, 1885 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 618, 648, 786, 816, 1825, 1855, 2944, 2974 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 23, 1430, 1774, 2594, 2904, 3053 |
| Bse1I | ACTGG | 6 cut(s) | 1768, 1790, 2137, 2289, 2726, 2940 |
| Bse3DI | GCAATG | 2 cut(s) | 2201, 2329 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2229 |
| BseBI | CCWGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| BseDI | CCNNGG | 3 cut(s) | 1543, 1829, 1885 |
| BseGI | GGATG | 9 cut(s) | 292, 508, 1141, 1243, 1497, 1591, 2746, 2758, 2976 |
| BseJI | GATNNNNATC | 1 cut(s) | 2229 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 23, 1430, 1774, 2594, 2904, 3053 |
| BseMI | GCAATG | 2 cut(s) | 2201, 2329 |
| BseMII | CTCAG | 2 cut(s) | 74, 1149 |
| BseNI | ACTGG | 6 cut(s) | 1768, 1790, 2137, 2289, 2726, 2940 |
| BseRI | GAGGAG | 1 cut(s) | 201 |
| BseSI | GKGCMC | 1 cut(s) | 1863 |
| BseXI | GCAGC | 2 cut(s) | 460, 470 |
| BseYI | CCCAGC | 1 cut(s) | 3060 |
| BsgI | GTGCAG | 3 cut(s) | 117, 1832, 1849 |
| Bsh1236I | CGCG | 2 cut(s) | 106, 1593 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1808 |
| BshFI | GGCC | 7 cut(s) | 123, 387, 1457, 1861, 2136, 2558, 3099 |
| BshNI | GGYRCC | 1 cut(s) | 26 |
| BsiEI | CGRYCG | 1 cut(s) | 1808 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1098 |
| BsiSI | CCGG | 1 cut(s) | 2485 |
| BslFI | GGGAC | 2 cut(s) | 1525, 2819 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 23, 1430, 1774, 2594, 2904, 3053 |
| BsmAI | GTCTC | 5 cut(s) | 1439, 1828, 2049, 2154, 2482 |
| BsmFI | GGGAC | 2 cut(s) | 1525, 2819 |
| BsmI | GAATGC | 1 cut(s) | 2704 |
| BsnI | GGCC | 7 cut(s) | 123, 387, 1457, 1861, 2136, 2558, 3099 |
| Bso31I | GGTCTC | 1 cut(s) | 1439 |
| Bsp120I | GGGCCC | 1 cut(s) | 1859 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1098, 1863 |
| Bsp1407I | TGTACA | 1 cut(s) | 129 |
| Bsp68I | TCGCGA | 1 cut(s) | 1593 |
| BspACI | CCGC | 5 cut(s) | 1950, 2027, 2338, 2496, 3014 |
| BspANI | GGCC | 7 cut(s) | 123, 387, 1457, 1861, 2136, 2558, 3099 |
| BspCNI | CTCAG | 2 cut(s) | 75, 1150 |
| BspFNI | CGCG | 2 cut(s) | 106, 1593 |
| BspLI | GGNNCC | 5 cut(s) | 28, 1185, 1778, 1861, 2599 |
| BspPI | GGATC | 7 cut(s) | 12, 235, 353, 650, 954, 1991, 2019 |
| BspQI | GCTCTTC | 1 cut(s) | 1103 |
| BspT107I | GGYRCC | 1 cut(s) | 26 |
| BspTI | CTTAAG | 1 cut(s) | 2030 |
| BspTNI | GGTCTC | 1 cut(s) | 1439 |
| BsrBI | CCGCTC | 1 cut(s) | 2338 |
| BsrDI | GCAATG | 2 cut(s) | 2201, 2329 |
| BsrGI | TGTACA | 1 cut(s) | 129 |
| BsrI | ACTGG | 6 cut(s) | 1768, 1790, 2137, 2289, 2726, 2940 |
| BssECI | CCNNGG | 3 cut(s) | 1543, 1829, 1885 |
| BssNAI | GTATAC | 1 cut(s) | 1844 |
| BssNI | GRCGYC | 1 cut(s) | 27 |
| BssSI | CACGAG | 2 cut(s) | 612, 2508 |
| BssT1I | CCWWGG | 1 cut(s) | 1829 |
| Bst1107I | GTATAC | 1 cut(s) | 1844 |
| Bst2BI | CACGAG | 2 cut(s) | 612, 2508 |
| Bst2UI | CCWGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| Bst4CI | ACNGT | 3 cut(s) | 1572, 2162, 2589 |
| Bst6I | CTCTTC | 4 cut(s) | 37, 43, 1103, 2558 |
| BstACI | GRCGYC | 1 cut(s) | 27 |
| BstAFI | CTTAAG | 1 cut(s) | 2030 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 263 |
| BstAUI | TGTACA | 1 cut(s) | 129 |
| BstBAI | YACGTR | 1 cut(s) | 2366 |
| BstC8I | GCNNGC | 3 cut(s) | 471, 2027, 2336 |
| BstDEI | CTNAG | 9 cut(s) | 8, 83, 413, 828, 899, 919, 1158, 1925, 2084 |
| BstF5I | GGATG | 9 cut(s) | 292, 508, 1141, 1243, 1497, 1591, 2746, 2758, 2976 |
| BstFNI | CGCG | 2 cut(s) | 106, 1593 |
| BstH2I | RGCGCY | 1 cut(s) | 30 |
| BstHHI | GCGC | 2 cut(s) | 29, 108 |
| BstMAI | GTCTC | 5 cut(s) | 1439, 1828, 2049, 2154, 2482 |
| BstMCI | CGRYCG | 1 cut(s) | 1808 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 263 |
| BstNI | CCWGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| BstNSI | RCATGY | 1 cut(s) | 1362 |
| BstSCI | CCNGG | 5 cut(s) | 387, 759, 1543, 1749, 1884 |
| BstSLI | GKGCMC | 1 cut(s) | 1863 |
| BstUI | CGCG | 2 cut(s) | 106, 1593 |
| BstV1I | GCAGC | 2 cut(s) | 460, 470 |
| BstV2I | GAAGAC | 3 cut(s) | 627, 657, 1515 |
| BstX2I | RGATCY | 6 cut(s) | 4, 300, 358, 1213, 2011, 2080 |
| BstYI | RGATCY | 6 cut(s) | 4, 300, 358, 1213, 2011, 2080 |
| BstZ17I | GTATAC | 1 cut(s) | 1844 |
| BsuI | GTATCC | 1 cut(s) | 1725 |
| BsuRI | GGCC | 7 cut(s) | 123, 387, 1457, 1861, 2136, 2558, 3099 |
| BtsCI | GGATG | 9 cut(s) | 292, 508, 1141, 1243, 1497, 1591, 2746, 2758, 2976 |
| BtsI | GCAGTG | 1 cut(s) | 2479 |
| BtsIMutI | CAGTG | 7 cut(s) | 314, 1783, 2130, 2158, 2282, 2479, 2933 |
| BtuMI | TCGCGA | 1 cut(s) | 1593 |
| Cac8I | GCNNGC | 3 cut(s) | 471, 2027, 2336 |
| CfoI | GCGC | 2 cut(s) | 29, 108 |
| Cfr13I | GGNCC | 6 cut(s) | 385, 937, 986, 1777, 1859, 1860 |
| Csp6I | GTAC | 2 cut(s) | 130, 2180 |
| CviQI | GTAC | 2 cut(s) | 130, 2180 |
| DdeI | CTNAG | 9 cut(s) | 8, 83, 413, 828, 899, 919, 1158, 1925, 2084 |
| DinI | GGCGCC | 1 cut(s) | 28 |
| DraI | TTTAAA | 2 cut(s) | 1369, 1717 |
| DraIII | CACNNNGTG | 1 cut(s) | 854 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2062 |
| EaeI | YGGCCR | 1 cut(s) | 2556 |
| Eam1104I | CTCTTC | 4 cut(s) | 37, 43, 1103, 2558 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2062 |
| EarI | CTCTTC | 4 cut(s) | 37, 43, 1103, 2558 |
| Ecl136II | GAGCTC | 1 cut(s) | 1096 |
| Eco130I | CCWWGG | 1 cut(s) | 1829 |
| Eco147I | AGGCCT | 1 cut(s) | 1457 |
| Eco24I | GRGCYC | 2 cut(s) | 1098, 1863 |
| Eco31I | GGTCTC | 1 cut(s) | 1439 |
| Eco32I | GATATC | 3 cut(s) | 549, 1274, 2126 |
| Eco47I | GGWCC | 3 cut(s) | 937, 986, 1777 |
| Eco53kI | GAGCTC | 1 cut(s) | 1096 |
| Eco57I | CTGAAG | 5 cut(s) | 73, 908, 1074, 1672, 2691 |
| Eco72I | CACGTG | 1 cut(s) | 2366 |
| EcoICRI | GAGCTC | 1 cut(s) | 1096 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1777, 1860 |
| EcoRI | GAATTC | 2 cut(s) | 1897, 2675 |
| EcoRII | CCWGG | 5 cut(s) | 387, 759, 1543, 1749, 1884 |
| EcoRV | GATATC | 3 cut(s) | 549, 1274, 2126 |
| EcoT14I | CCWWGG | 1 cut(s) | 1829 |
| EcoT22I | ATGCAT | 4 cut(s) | 268, 1255, 1497, 2203 |
| EcoT38I | GRGCYC | 2 cut(s) | 1098, 1863 |
| EgeI | GGCGCC | 1 cut(s) | 28 |
| EheI | GGCGCC | 1 cut(s) | 28 |
| ErhI | CCWWGG | 1 cut(s) | 1829 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 266, 298, 416, 448, 1332, 1364 |
| FaqI | GGGAC | 2 cut(s) | 1525, 2819 |
| FauI | CCCGC | 1 cut(s) | 2034 |
| FauNDI | CATATG | 1 cut(s) | 663 |
| FbaI | TGATCA | 1 cut(s) | 3075 |
| FblI | GTMKAC | 2 cut(s) | 1567, 1843 |
| Fnu4HI | GCNGC | 5 cut(s) | 459, 474, 2339, 2497, 3014 |
| FokI | GGATG | 9 cut(s) | 299, 515, 1148, 1250, 1504, 1598, 2753, 2765, 2983 |
| FriOI | GRGCYC | 2 cut(s) | 1098, 1863 |
| Fsp4HI | GCNGC | 5 cut(s) | 459, 474, 2339, 2497, 3014 |
| FspBI | CTAG | 2 cut(s) | 852, 2078 |
| GlaI | GCGC | 2 cut(s) | 28, 107 |
| GluI | GCNGC | 5 cut(s) | 459, 474, 2339, 2497, 3014 |
| GsaI | CCCAGC | 1 cut(s) | 3064 |
| GsuI | CTGGAG | 2 cut(s) | 987, 1949 |
| HaeII | RGCGCY | 1 cut(s) | 30 |
| HaeIII | GGCC | 7 cut(s) | 123, 387, 1457, 1861, 2136, 2558, 3099 |
| HapII | CCGG | 1 cut(s) | 2485 |
| HhaI | GCGC | 2 cut(s) | 29, 108 |
| Hin1I | GRCGYC | 1 cut(s) | 27 |
| Hin6I | GCGC | 2 cut(s) | 27, 106 |
| HinP1I | GCGC | 2 cut(s) | 27, 106 |
| HincII | GTYRAC | 2 cut(s) | 145, 2643 |
| HindII | GTYRAC | 2 cut(s) | 145, 2643 |
| HindIII | AAGCTT | 3 cut(s) | 1086, 1684, 1922 |
| HpaI | GTTAAC | 1 cut(s) | 145 |
| HpaII | CCGG | 1 cut(s) | 2485 |
| HphI | GGTGA | 7 cut(s) | 401, 407, 1385, 1559, 2474, 2577, 2719 |
| Hpy99I | CGWCG | 2 cut(s) | 367, 1682 |
| HpyCH4III | ACNGT | 3 cut(s) | 1572, 2162, 2589 |
| HpyCH4IV | ACGT | 3 cut(s) | 1168, 2209, 2365 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 263 |
| HpyF3I | CTNAG | 9 cut(s) | 8, 83, 413, 828, 899, 919, 1158, 1925, 2084 |
| HpySE526I | ACGT | 3 cut(s) | 1168, 2209, 2365 |
| Hsp92I | GRCGYC | 1 cut(s) | 27 |
| HspAI | GCGC | 2 cut(s) | 27, 106 |
| KasI | GGCGCC | 1 cut(s) | 26 |
| Ksp22I | TGATCA | 1 cut(s) | 3075 |
| KspAI | GTTAAC | 1 cut(s) | 145 |
| LguI | GCTCTTC | 1 cut(s) | 1103 |
| LmnI | GCTCC | 2 cut(s) | 205, 639 |
| Lsp1109I | GCAGC | 2 cut(s) | 460, 470 |
| LweI | GCATC | 6 cut(s) | 64, 275, 388, 1240, 1482, 2961 |
| MaeI | CTAG | 2 cut(s) | 852, 2078 |
| MaeII | ACGT | 3 cut(s) | 1168, 2209, 2365 |
| MaeIII | GTNAC | 8 cut(s) | 856, 1310, 1373, 1412, 1649, 2106, 2248, 2851 |
| MbiI | CCGCTC | 1 cut(s) | 2338 |
| MfeI | CAATTG | 2 cut(s) | 402, 2800 |
| MflI | RGATCY | 6 cut(s) | 4, 300, 358, 1213, 2011, 2080 |
| MhlI | GDGCHC | 2 cut(s) | 1098, 1863 |
| MlsI | TGGCCA | 1 cut(s) | 2558 |
| MluNI | TGGCCA | 1 cut(s) | 2558 |
| Mly113I | GGCGCC | 1 cut(s) | 27 |
| MlyI | GAGTC | 4 cut(s) | 1547, 1923, 2484, 3075 |
| MmeI | TCCRAC | 4 cut(s) | 345, 431, 580, 2448 |
| Mox20I | TGGCCA | 1 cut(s) | 2558 |
| Mph1103I | ATGCAT | 4 cut(s) | 268, 1255, 1497, 2203 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1344, 1527, 2274 |
| MscI | TGGCCA | 1 cut(s) | 2558 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1405, 1490, 1854 |
| Msp20I | TGGCCA | 1 cut(s) | 2558 |
| MspA1I | CMGCKG | 1 cut(s) | 1950 |
| MspCI | CTTAAG | 1 cut(s) | 2030 |
| MspI | CCGG | 1 cut(s) | 2485 |
| MspR9I | CCNGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| MunI | CAATTG | 2 cut(s) | 402, 2800 |
| Mva1269I | GAATGC | 1 cut(s) | 2704 |
| MvaI | CCWGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| MvnI | CGCG | 2 cut(s) | 106, 1593 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 263 |
| NarI | GGCGCC | 1 cut(s) | 27 |
| NdeI | CATATG | 1 cut(s) | 663 |
| NlaIV | GGNNCC | 5 cut(s) | 28, 1185, 1778, 1861, 2599 |
| NmuCI | GTSAC | 4 cut(s) | 856, 1373, 1412, 2851 |
| NruI | TCGCGA | 1 cut(s) | 1593 |
| NsiI | ATGCAT | 4 cut(s) | 268, 1255, 1497, 2203 |
| NspI | RCATGY | 1 cut(s) | 1362 |
| OliI | CACNNNNGTG | 1 cut(s) | 1854 |
| PceI | AGGCCT | 1 cut(s) | 1457 |
| PciSI | GCTCTTC | 1 cut(s) | 1103 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1814 |
| PctI | GAATGC | 1 cut(s) | 2704 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1344, 1527, 2274 |
| PkrI | GCNGC | 5 cut(s) | 460, 475, 2340, 2498, 3015 |
| Ple19I | CGATCG | 1 cut(s) | 1808 |
| PleI | GAGTC | 4 cut(s) | 1546, 1923, 2484, 3074 |
| PluTI | GGCGCC | 1 cut(s) | 30 |
| PmaCI | CACGTG | 1 cut(s) | 2366 |
| PmlI | CACGTG | 1 cut(s) | 2366 |
| PpsI | GAGTC | 4 cut(s) | 1546, 1923, 2484, 3074 |
| Ppu21I | YACGTR | 1 cut(s) | 2366 |
| PpuMI | RGGWCCY | 1 cut(s) | 1777 |
| PshBI | ATTAAT | 1 cut(s) | 1959 |
| Psp124BI | GAGCTC | 1 cut(s) | 1098 |
| Psp5II | RGGWCCY | 1 cut(s) | 1777 |
| Psp6I | CCWGG | 5 cut(s) | 387, 759, 1543, 1749, 1884 |
| PspCI | CACGTG | 1 cut(s) | 2366 |
| PspFI | CCCAGC | 1 cut(s) | 3060 |
| PspGI | CCWGG | 5 cut(s) | 387, 759, 1543, 1749, 1884 |
| PspN4I | GGNNCC | 5 cut(s) | 28, 1185, 1778, 1861, 2599 |
| PspOMI | GGGCCC | 1 cut(s) | 1859 |
| PspPI | GGNCC | 6 cut(s) | 385, 937, 986, 1777, 1859, 1860 |
| PspPPI | RGGWCCY | 1 cut(s) | 1777 |
| PsuI | RGATCY | 6 cut(s) | 4, 300, 358, 1213, 2011, 2080 |
| PvuI | CGATCG | 1 cut(s) | 1808 |
| RruI | TCGCGA | 1 cut(s) | 1593 |
| RsaI | GTAC | 2 cut(s) | 131, 2181 |
| RsaNI | GTAC | 2 cut(s) | 130, 2180 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1405, 1490, 1854 |
| SacI | GAGCTC | 1 cut(s) | 1098 |
| SapI | GCTCTTC | 1 cut(s) | 1103 |
| SatI | GCNGC | 5 cut(s) | 459, 474, 2339, 2497, 3014 |
| Sau96I | GGNCC | 6 cut(s) | 385, 937, 986, 1777, 1859, 1860 |
| SchI | GAGTC | 4 cut(s) | 1547, 1923, 2484, 3075 |
| ScrFI | CCNGG | 5 cut(s) | 389, 761, 1545, 1751, 1886 |
| SduI | GDGCHC | 2 cut(s) | 1098, 1863 |
| SfaNI | GCATC | 6 cut(s) | 64, 275, 388, 1240, 1482, 2961 |
| SfoI | GGCGCC | 1 cut(s) | 28 |
| SinI | GGWCC | 3 cut(s) | 937, 986, 1777 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1405, 1490, 1854 |
| SmlI | CTYRAG | 1 cut(s) | 2030 |
| SmoI | CTYRAG | 1 cut(s) | 2030 |
| SseBI | AGGCCT | 1 cut(s) | 1457 |
| SsiI | CCGC | 5 cut(s) | 1950, 2027, 2338, 2496, 3014 |
| SspDI | GGCGCC | 1 cut(s) | 26 |
| SspI | AATATT | 1 cut(s) | 345 |
| SspMI | CTAG | 2 cut(s) | 852, 2078 |
| SstI | GAGCTC | 1 cut(s) | 1098 |
| StuI | AGGCCT | 1 cut(s) | 1457 |
| StyD4I | CCNGG | 5 cut(s) | 387, 759, 1543, 1749, 1884 |
| StyI | CCWWGG | 1 cut(s) | 1829 |
| TaaI | ACNGT | 3 cut(s) | 1572, 2162, 2589 |
| TaiI | ACGT | 3 cut(s) | 1171, 2212, 2368 |
| TaqI | TCGA | 6 cut(s) | 213, 1722, 2186, 2696, 2992, 3004 |
| TatI | WGTACW | 1 cut(s) | 129 |
| TauI | GCSGC | 3 cut(s) | 2341, 2499, 3016 |
| TscAI | CASTG | 7 cut(s) | 314, 1790, 2137, 2165, 2289, 2486, 2940 |
| TseFI | GTSAC | 4 cut(s) | 856, 1373, 1412, 2851 |
| TseI | GCWGC | 2 cut(s) | 458, 473 |
| Tsp45I | GTSAC | 4 cut(s) | 856, 1373, 1412, 2851 |
| TspGWI | ACGGA | 5 cut(s) | 351, 1176, 1634, 1695, 2388 |
| TspRI | CASTG | 7 cut(s) | 314, 1790, 2137, 2165, 2289, 2486, 2940 |
| Vha464I | CTTAAG | 1 cut(s) | 2030 |
| VpaK11BI | GGWCC | 3 cut(s) | 937, 986, 1777 |
| VspI | ATTAAT | 1 cut(s) | 1959 |
| XceI | RCATGY | 1 cut(s) | 1362 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2608 |
| XmiI | GTMKAC | 2 cut(s) | 1567, 1843 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1344, 1527, 2274 |
| XspI | CTAG | 2 cut(s) | 852, 2078 |
| Zsp2I | ATGCAT | 4 cut(s) | 268, 1255, 1497, 2203 |