TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 652 - 821 | 6.2e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 881 - 948 | 5.5e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 1185 - 1366 | 2.9e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 1303 - 1389 | 1.4e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 2067, 2838, 3077 |
| Acc36I | ACCTGC | 1 cut(s) | 2862 |
| AccB1I | GGYRCC | 1 cut(s) | 2026 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3260 |
| AccII | CGCG | 1 cut(s) | 3592 |
| AciI | CCGC | 5 cut(s) | 184, 198, 1754, 3592, 4055 |
| AclI | AACGTT | 1 cut(s) | 1004 |
| AclWI | GGATC | 7 cut(s) | 392, 1785, 3165, 3178, 3501, 3573, 3612 |
| AcoI | YGGCCR | 1 cut(s) | 1929 |
| AcuI | CTGAAG | 2 cut(s) | 289, 2457 |
| AdeI | CACNNNGTG | 1 cut(s) | 2501 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 273, 2036, 2588, 3016, 3260, 3627 |
| AflIII | ACRYGT | 2 cut(s) | 3103, 4393 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3236 |
| AjiI | CACGTC | 1 cut(s) | 3104 |
| AjnI | CCWGG | 4 cut(s) | 393, 871, 2103, 2857 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 4057, 4089 |
| Alw21I | GWGCWC | 2 cut(s) | 339, 3581 |
| Alw26I | GTCTC | 3 cut(s) | 1139, 1641, 1694 |
| AlwI | GGATC | 7 cut(s) | 392, 1785, 3165, 3178, 3501, 3573, 3612 |
| AoxI | GGCC | 3 cut(s) | 45, 346, 1929 |
| ApeKI | GCWGC | 1 cut(s) | 2334 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1241, 1273 |
| AseI | ATTAAT | 5 cut(s) | 56, 1445, 1449, 3383, 4253 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 3363, 3453, 4056, 4362 |
| AspS9I | GGNCC | 1 cut(s) | 2404 |
| AsuHPI | GGTGA | 8 cut(s) | 256, 672, 730, 1561, 2003, 2206, 2339, 2690 |
| AsuII | TTCGAA | 2 cut(s) | 1636, 2608 |
| AvaII | GGWCC | 1 cut(s) | 2404 |
| BaeGI | GKGCMC | 1 cut(s) | 2029 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2178, 2211 |
| BalI | TGGCCA | 1 cut(s) | 1931 |
| BamHI | GGATCC | 1 cut(s) | 3170 |
| BanI | GGYRCC | 1 cut(s) | 2026 |
| BanII | GRGCYC | 2 cut(s) | 339, 1372 |
| BauI | CACGAG | 2 cut(s) | 243, 350 |
| BbsI | GAAGAC | 1 cut(s) | 2424 |
| Bbv12I | GWGCWC | 2 cut(s) | 339, 3581 |
| BbvI | GCAGC | 1 cut(s) | 2346 |
| BccI | CCATC | 7 cut(s) | 276, 590, 1212, 2774, 3018, 3049, 3679 |
| BciT130I | CCWGG | 4 cut(s) | 395, 873, 2105, 2859 |
| BclI | TGATCA | 2 cut(s) | 1426, 2343 |
| BcoDI | GTCTC | 3 cut(s) | 1139, 1641, 1694 |
| BfuAI | ACCTGC | 1 cut(s) | 2862 |
| BglII | AGATCT | 1 cut(s) | 1890 |
| BisI | GCNGC | 1 cut(s) | 2335 |
| BlsI | GCNGC | 1 cut(s) | 2336 |
| BmcAI | AGTACT | 2 cut(s) | 1905, 2751 |
| Bme1390I | CCNGG | 4 cut(s) | 395, 873, 2105, 2859 |
| Bme18I | GGWCC | 1 cut(s) | 2404 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3236 |
| BmgBI | CACGTC | 1 cut(s) | 3104 |
| BmgT120I | GGNCC | 1 cut(s) | 2404 |
| BmiI | GGNNCC | 6 cut(s) | 321, 1369, 2028, 3172, 3820, 4215 |
| BmrFI | CCNGG | 4 cut(s) | 395, 873, 2105, 2859 |
| BmrI | ACTGGG | 2 cut(s) | 250, 1934 |
| BmsI | GCATC | 5 cut(s) | 857, 975, 2623, 2787, 3199 |
| BmuI | ACTGGG | 2 cut(s) | 250, 1934 |
| BpiI | GAAGAC | 1 cut(s) | 2424 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4133 |
| Bpu14I | TTCGAA | 2 cut(s) | 1636, 2608 |
| BpuEI | CTTGAG | 6 cut(s) | 2453, 2502, 2718, 2975, 3641, 4289 |
| BsaAI | YACGTR | 4 cut(s) | 417, 2183, 3500, 4169 |
| BsaJI | CCNNGG | 4 cut(s) | 83, 393, 471, 871 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 273, 2036, 2588, 3016, 3260, 3627 |
| Bse118I | RCCGGY | 1 cut(s) | 539 |
| Bse1I | ACTGG | 4 cut(s) | 256, 330, 1655, 1940 |
| Bse3DI | GCAATG | 2 cut(s) | 2643, 2658 |
| BseBI | CCWGG | 4 cut(s) | 395, 873, 2105, 2859 |
| BseDI | CCNNGG | 4 cut(s) | 83, 393, 471, 871 |
| BseGI | GGATG | 7 cut(s) | 179, 370, 582, 2287, 2635, 3060, 3223 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 273, 2036, 2588, 3016, 3260, 3627 |
| BseMI | GCAATG | 2 cut(s) | 2643, 2658 |
| BseMII | CTCAG | 6 cut(s) | 92, 858, 1908, 3382, 4010, 4395 |
| BseNI | ACTGG | 4 cut(s) | 256, 330, 1655, 1940 |
| BseRI | GAGGAG | 6 cut(s) | 1116, 1123, 1194, 1238, 1567, 1710 |
| BseSI | GKGCMC | 1 cut(s) | 2029 |
| BseXI | GCAGC | 1 cut(s) | 2346 |
| BsgI | GTGCAG | 2 cut(s) | 1704, 3490 |
| Bsh1236I | CGCG | 1 cut(s) | 3592 |
| BshFI | GGCC | 3 cut(s) | 47, 348, 1931 |
| BshNI | GGYRCC | 1 cut(s) | 2026 |
| BsiHKAI | GWGCWC | 2 cut(s) | 339, 3581 |
| BsiSI | CCGG | 1 cut(s) | 540 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 273, 2036, 2588, 3016, 3260, 3627 |
| BsmAI | GTCTC | 3 cut(s) | 1139, 1641, 1694 |
| BsmBI | CGTCTC | 1 cut(s) | 1139 |
| BsmI | GAATGC | 3 cut(s) | 2455, 2767, 3986 |
| BsnI | GGCC | 3 cut(s) | 47, 348, 1931 |
| Bsp119I | TTCGAA | 2 cut(s) | 1636, 2608 |
| Bsp1286I | GDGCHC | 4 cut(s) | 339, 1372, 2029, 3581 |
| Bsp1407I | TGTACA | 3 cut(s) | 2895, 3336, 4396 |
| BspACI | CCGC | 5 cut(s) | 184, 198, 1754, 3592, 4055 |
| BspANI | GGCC | 3 cut(s) | 47, 348, 1931 |
| BspCNI | CTCAG | 6 cut(s) | 93, 857, 1907, 3381, 4011, 4396 |
| BspFNI | CGCG | 1 cut(s) | 3592 |
| BspHI | TCATGA | 1 cut(s) | 2884 |
| BspLI | GGNNCC | 6 cut(s) | 321, 1369, 2028, 3172, 3820, 4215 |
| BspMI | ACCTGC | 1 cut(s) | 2862 |
| BspPI | GGATC | 7 cut(s) | 392, 1785, 3165, 3178, 3501, 3573, 3612 |
| BspT104I | TTCGAA | 2 cut(s) | 1636, 2608 |
| BspT107I | GGYRCC | 1 cut(s) | 2026 |
| BsrDI | GCAATG | 2 cut(s) | 2643, 2658 |
| BsrFI | RCCGGY | 1 cut(s) | 539 |
| BsrGI | TGTACA | 3 cut(s) | 2895, 3336, 4396 |
| BsrI | ACTGG | 4 cut(s) | 256, 330, 1655, 1940 |
| BssAI | RCCGGY | 1 cut(s) | 539 |
| BssECI | CCNNGG | 4 cut(s) | 83, 393, 471, 871 |
| BssSI | CACGAG | 2 cut(s) | 243, 350 |
| BssT1I | CCWWGG | 1 cut(s) | 471 |
| Bst2BI | CACGAG | 2 cut(s) | 243, 350 |
| Bst2UI | CCWGG | 4 cut(s) | 395, 873, 2105, 2859 |
| Bst4CI | ACNGT | 9 cut(s) | 84, 137, 224, 684, 1496, 1819, 3083, 3260, 3866 |
| Bst6I | CTCTTC | 6 cut(s) | 1130, 1708, 1959, 1968, 2169, 4228 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2501, 2806 |
| BstAUI | TGTACA | 3 cut(s) | 2895, 3336, 4396 |
| BstBAI | YACGTR | 4 cut(s) | 417, 2183, 3500, 4169 |
| BstBI | TTCGAA | 2 cut(s) | 1636, 2608 |
| BstC8I | GCNNGC | 5 cut(s) | 405, 541, 838, 2665, 3926 |
| BstDSI | CCRYGG | 1 cut(s) | 83 |
| BstEII | GGTNACC | 1 cut(s) | 262 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2586 |
| BstF5I | GGATG | 7 cut(s) | 179, 370, 582, 2287, 2635, 3060, 3223 |
| BstFNI | CGCG | 1 cut(s) | 3592 |
| BstMAI | GTCTC | 3 cut(s) | 1139, 1641, 1694 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 2501, 2806, 3886 |
| BstNI | CCWGG | 4 cut(s) | 395, 873, 2105, 2859 |
| BstNSI | RCATGY | 2 cut(s) | 2667, 4397 |
| BstPI | GGTNACC | 1 cut(s) | 262 |
| BstSCI | CCNGG | 4 cut(s) | 393, 871, 2103, 2857 |
| BstSLI | GKGCMC | 1 cut(s) | 2029 |
| BstUI | CGCG | 1 cut(s) | 3592 |
| BstV1I | GCAGC | 1 cut(s) | 2346 |
| BstV2I | GAAGAC | 1 cut(s) | 2424 |
| BstX2I | RGATCY | 6 cut(s) | 1777, 1890, 3170, 3493, 3565, 3617 |
| BstYI | RGATCY | 6 cut(s) | 1777, 1890, 3170, 3493, 3565, 3617 |
| BsuRI | GGCC | 3 cut(s) | 47, 348, 1931 |
| BtgI | CCRYGG | 1 cut(s) | 83 |
| BtrI | CACGTC | 1 cut(s) | 3104 |
| BtsCI | GGATG | 7 cut(s) | 179, 370, 582, 2287, 2635, 3060, 3223 |
| BtsIMutI | CAGTG | 6 cut(s) | 263, 337, 1422, 1501, 2850, 3265 |
| BveI | ACCTGC | 1 cut(s) | 2862 |
| Cac8I | GCNNGC | 5 cut(s) | 405, 541, 838, 2665, 3926 |
| CciI | TCATGA | 1 cut(s) | 2884 |
| Cfr10I | RCCGGY | 1 cut(s) | 539 |
| Cfr13I | GGNCC | 1 cut(s) | 2404 |
| CseI | GACGC | 1 cut(s) | 4138 |
| DraI | TTTAAA | 6 cut(s) | 453, 601, 1282, 3306, 3429, 4249 |
| DraIII | CACNNNGTG | 1 cut(s) | 2501 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3236 |
| EaeI | YGGCCR | 1 cut(s) | 1929 |
| Eam1104I | CTCTTC | 6 cut(s) | 1130, 1708, 1959, 1968, 2169, 4228 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3236 |
| EarI | CTCTTC | 6 cut(s) | 1130, 1708, 1959, 1968, 2169, 4228 |
| Ecl136II | GAGCTC | 1 cut(s) | 337 |
| Eco130I | CCWWGG | 1 cut(s) | 471 |
| Eco147I | AGGCCT | 1 cut(s) | 348 |
| Eco24I | GRGCYC | 2 cut(s) | 339, 1372 |
| Eco47I | GGWCC | 1 cut(s) | 2404 |
| Eco53kI | GAGCTC | 1 cut(s) | 337 |
| Eco57I | CTGAAG | 2 cut(s) | 289, 2457 |
| Eco91I | GGTNACC | 1 cut(s) | 262 |
| EcoICRI | GAGCTC | 1 cut(s) | 337 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2586 |
| EcoO65I | GGTNACC | 1 cut(s) | 262 |
| EcoRI | GAATTC | 2 cut(s) | 1291, 3440 |
| EcoRII | CCWGG | 4 cut(s) | 393, 871, 2103, 2857 |
| EcoT14I | CCWWGG | 1 cut(s) | 471 |
| EcoT22I | ATGCAT | 2 cut(s) | 2802, 3986 |
| EcoT38I | GRGCYC | 2 cut(s) | 339, 1372 |
| ErhI | CCWWGG | 1 cut(s) | 471 |
| Esp3I | CGTCTC | 1 cut(s) | 1139 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2246, 2278 |
| FauI | CCCGC | 1 cut(s) | 191 |
| FbaI | TGATCA | 2 cut(s) | 1426, 2343 |
| Fnu4HI | GCNGC | 1 cut(s) | 2335 |
| FokI | GGATG | 7 cut(s) | 166, 377, 569, 2294, 2642, 3067, 3210 |
| FriOI | GRGCYC | 2 cut(s) | 339, 1372 |
| Fsp4HI | GCNGC | 1 cut(s) | 2335 |
| GluI | GCNGC | 1 cut(s) | 2335 |
| HaeIII | GGCC | 3 cut(s) | 47, 348, 1931 |
| HapII | CCGG | 1 cut(s) | 540 |
| HgaI | GACGC | 1 cut(s) | 4138 |
| HincII | GTYRAC | 1 cut(s) | 4000 |
| HindII | GTYRAC | 1 cut(s) | 4000 |
| HindIII | AAGCTT | 3 cut(s) | 838, 3410, 3584 |
| HpaII | CCGG | 1 cut(s) | 540 |
| HphI | GGTGA | 8 cut(s) | 256, 672, 730, 1561, 2003, 2206, 2339, 2690 |
| Hpy166II | GTNNAC | 6 cut(s) | 80, 420, 2896, 3149, 3339, 4000 |
| Hpy188I | TCNGA | 9 cut(s) | 9, 102, 308, 1480, 1516, 2476, 3856, 4383, 4405 |
| Hpy8I | GTNNAC | 6 cut(s) | 80, 420, 2896, 3149, 3339, 4000 |
| Hpy99I | CGWCG | 1 cut(s) | 4132 |
| HpyAV | CCTTC | 9 cut(s) | 301, 418, 476, 1662, 2084, 2132, 2481, 2774, 3747 |
| HpyCH4III | ACNGT | 9 cut(s) | 84, 137, 224, 684, 1496, 1819, 3083, 3260, 3866 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 2501, 2806, 3886 |
| KroI | GCCGGC | 1 cut(s) | 539 |
| KroNI | GCCGGC | 1 cut(s) | 541 |
| Ksp22I | TGATCA | 2 cut(s) | 1426, 2343 |
| LmnI | GCTCC | 3 cut(s) | 342, 1367, 2290 |
| Lsp1109I | GCAGC | 1 cut(s) | 2346 |
| LweI | GCATC | 5 cut(s) | 857, 975, 2623, 2787, 3199 |
| MaeIII | GTNAC | 6 cut(s) | 175, 262, 523, 3196, 3500, 3866 |
| MfeI | CAATTG | 3 cut(s) | 2049, 2073, 2317 |
| MflI | RGATCY | 6 cut(s) | 1777, 1890, 3170, 3493, 3565, 3617 |
| MhlI | GDGCHC | 4 cut(s) | 339, 1372, 2029, 3581 |
| MlsI | TGGCCA | 1 cut(s) | 1931 |
| MluNI | TGGCCA | 1 cut(s) | 1931 |
| MlyI | GAGTC | 2 cut(s) | 1432, 2155 |
| MmeI | TCCRAC | 4 cut(s) | 742, 1309, 1924, 3517 |
| Mox20I | TGGCCA | 1 cut(s) | 1931 |
| Mph1103I | ATGCAT | 2 cut(s) | 2802, 3986 |
| MroNI | GCCGGC | 1 cut(s) | 539 |
| MroXI | GAANNNNTTC | 4 cut(s) | 3363, 3453, 4056, 4362 |
| MscI | TGGCCA | 1 cut(s) | 1931 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1795, 2139, 2889, 3875 |
| Msp20I | TGGCCA | 1 cut(s) | 1931 |
| MspI | CCGG | 1 cut(s) | 540 |
| MspR9I | CCNGG | 4 cut(s) | 395, 873, 2105, 2859 |
| MunI | CAATTG | 3 cut(s) | 2049, 2073, 2317 |
| Mva1269I | GAATGC | 3 cut(s) | 2455, 2767, 3986 |
| MvaI | CCWGG | 4 cut(s) | 395, 873, 2105, 2859 |
| MvnI | CGCG | 1 cut(s) | 3592 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 2501, 2806, 3886 |
| NaeI | GCCGGC | 1 cut(s) | 541 |
| NgoMIV | GCCGGC | 1 cut(s) | 539 |
| NlaIV | GGNNCC | 6 cut(s) | 321, 1369, 2028, 3172, 3820, 4215 |
| NmuCI | GTSAC | 5 cut(s) | 175, 262, 523, 3500, 3866 |
| NsiI | ATGCAT | 2 cut(s) | 2802, 3986 |
| NspI | RCATGY | 2 cut(s) | 2667, 4397 |
| NspV | TTCGAA | 2 cut(s) | 1636, 2608 |
| PacI | TTAATTAA | 2 cut(s) | 1449, 2973 |
| PaeI | GCATGC | 1 cut(s) | 2667 |
| PagI | TCATGA | 1 cut(s) | 2884 |
| PceI | AGGCCT | 1 cut(s) | 348 |
| PciI | ACATGT | 1 cut(s) | 4393 |
| PctI | GAATGC | 3 cut(s) | 2455, 2767, 3986 |
| PdiI | GCCGGC | 1 cut(s) | 541 |
| PdmI | GAANNNNTTC | 4 cut(s) | 3363, 3453, 4056, 4362 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3260 |
| PkrI | GCNGC | 1 cut(s) | 2336 |
| PleI | GAGTC | 2 cut(s) | 1432, 2155 |
| PpsI | GAGTC | 2 cut(s) | 1432, 2155 |
| Ppu21I | YACGTR | 4 cut(s) | 417, 2183, 3500, 4169 |
| PscI | ACATGT | 1 cut(s) | 4393 |
| PshBI | ATTAAT | 5 cut(s) | 56, 1445, 1449, 3383, 4253 |
| PsiI | TTATAA | 3 cut(s) | 2067, 2838, 3077 |
| Psp124BI | GAGCTC | 1 cut(s) | 339 |
| Psp1406I | AACGTT | 1 cut(s) | 1004 |
| Psp6I | CCWGG | 4 cut(s) | 393, 871, 2103, 2857 |
| PspEI | GGTNACC | 1 cut(s) | 262 |
| PspGI | CCWGG | 4 cut(s) | 393, 871, 2103, 2857 |
| PspN4I | GGNNCC | 6 cut(s) | 321, 1369, 2028, 3172, 3820, 4215 |
| PspPI | GGNCC | 1 cut(s) | 2404 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4362, 4394 |
| PsuI | RGATCY | 6 cut(s) | 1777, 1890, 3170, 3493, 3565, 3617 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1795, 2139, 2889, 3875 |
| SacI | GAGCTC | 1 cut(s) | 339 |
| SatI | GCNGC | 1 cut(s) | 2335 |
| Sau96I | GGNCC | 1 cut(s) | 2404 |
| ScaI | AGTACT | 2 cut(s) | 1905, 2751 |
| SchI | GAGTC | 2 cut(s) | 1432, 2155 |
| ScrFI | CCNGG | 4 cut(s) | 395, 873, 2105, 2859 |
| SduI | GDGCHC | 4 cut(s) | 339, 1372, 2029, 3581 |
| SfaNI | GCATC | 5 cut(s) | 857, 975, 2623, 2787, 3199 |
| SfuI | TTCGAA | 2 cut(s) | 1636, 2608 |
| SinI | GGWCC | 1 cut(s) | 2404 |
| SmiI | ATTTAAAT | 2 cut(s) | 3429, 4249 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1795, 2139, 2889, 3875 |
| SmlI | CTYRAG | 6 cut(s) | 2432, 2517, 2733, 2954, 3656, 4268 |
| SmoI | CTYRAG | 6 cut(s) | 2432, 2517, 2733, 2954, 3656, 4268 |
| SphI | GCATGC | 1 cut(s) | 2667 |
| SseBI | AGGCCT | 1 cut(s) | 348 |
| SsiI | CCGC | 5 cut(s) | 184, 198, 1754, 3592, 4055 |
| SspI | AATATT | 2 cut(s) | 2706, 3178 |
| SstI | GAGCTC | 1 cut(s) | 339 |
| StuI | AGGCCT | 1 cut(s) | 348 |
| StyD4I | CCNGG | 4 cut(s) | 393, 871, 2103, 2857 |
| StyI | CCWWGG | 1 cut(s) | 471 |
| SwaI | ATTTAAAT | 2 cut(s) | 3429, 4249 |
| TaaI | ACNGT | 9 cut(s) | 84, 137, 224, 684, 1496, 1819, 3083, 3260, 3866 |
| TaqI | TCGA | 9 cut(s) | 851, 1619, 1636, 1899, 2032, 2388, 2608, 3918, 3953 |
| TatI | WGTACW | 7 cut(s) | 132, 1482, 1903, 2749, 2895, 3336, 4396 |
| TscAI | CASTG | 6 cut(s) | 263, 337, 1429, 1501, 2857, 3265 |
| TseFI | GTSAC | 5 cut(s) | 175, 262, 523, 3500, 3866 |
| TseI | GCWGC | 1 cut(s) | 2334 |
| Tsp45I | GTSAC | 5 cut(s) | 175, 262, 523, 3500, 3866 |
| TspGWI | ACGGA | 6 cut(s) | 332, 1757, 2232, 2517, 3874, 4370 |
| TspRI | CASTG | 6 cut(s) | 263, 337, 1429, 1501, 2857, 3265 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3260 |
| VpaK11BI | GGWCC | 1 cut(s) | 2404 |
| VspI | ATTAAT | 5 cut(s) | 56, 1445, 1449, 3383, 4253 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2586 |
| XbaI | TCTAGA | 2 cut(s) | 4048, 4084 |
| XceI | RCATGY | 2 cut(s) | 2667, 4397 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 749 |
| XmnI | GAANNNNTTC | 4 cut(s) | 3363, 3453, 4056, 4362 |
| ZrmI | AGTACT | 2 cut(s) | 1905, 2751 |
| Zsp2I | ATGCAT | 2 cut(s) | 2802, 3986 |