TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 87 - 252 | 9.6e-54 | TIR domain |
| TIR_2 | PF13676 | 89 - 185 | 8.6e-15 | TIR domain |
| NB-ARC | PF00931 | 270 - 439 | 7.2e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 507 - 578 | 6.3e-24 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_RPS2 | PF23247 | 625 - 756 | 1.1e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_13 | PF23286 | 697 - 880 | 7.3e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2973 |
| Acc65I | GGTACC | 1 cut(s) | 3336 |
| AccB1I | GGYRCC | 2 cut(s) | 172, 3336 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1705 |
| AccII | CGCG | 2 cut(s) | 2538, 3488 |
| AccIII | TCCGGA | 1 cut(s) | 694 |
| AciI | CCGC | 2 cut(s) | 3010, 3527 |
| AclWI | GGATC | 7 cut(s) | 95, 1140, 1852, 2469, 2852, 3303, 3437 |
| AcoI | YGGCCR | 1 cut(s) | 310 |
| AcsI | RAATTY | 8 cut(s) | 1271, 1303, 1464, 1951, 2559, 2896, 2911, 3164 |
| AcuI | CTGAAG | 1 cut(s) | 540 |
| AfaI | GTAC | 8 cut(s) | 127, 639, 1613, 1785, 2358, 2713, 2805, 3338 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 189, 218, 468, 989, 1327, 1705 |
| AflIII | ACRYGT | 5 cut(s) | 293, 1786, 2495, 3593, 3667 |
| AgeI | ACCGGT | 1 cut(s) | 2359 |
| AhlI | ACTAGT | 2 cut(s) | 3211, 3379 |
| AjnI | CCWGG | 1 cut(s) | 2809 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2903, 2935, 3464, 3496 |
| AleI | CACNNNNGTG | 1 cut(s) | 170 |
| Alw21I | GWGCWC | 2 cut(s) | 1638, 3615 |
| Alw26I | GTCTC | 1 cut(s) | 2126 |
| AlwI | GGATC | 7 cut(s) | 95, 1140, 1852, 2469, 2852, 3303, 3437 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2265 |
| Ama87I | CYCGRG | 1 cut(s) | 2129 |
| Aor13HI | TCCGGA | 1 cut(s) | 694 |
| AoxI | GGCC | 5 cut(s) | 3, 310, 530, 1375, 2151 |
| ApeKI | GCWGC | 6 cut(s) | 323, 579, 2220, 2604, 3082, 3467 |
| ApoI | RAATTY | 8 cut(s) | 1271, 1303, 1464, 1951, 2559, 2896, 2911, 3164 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 510, 542 |
| AsiGI | ACCGGT | 1 cut(s) | 2359 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1014, 1307, 1464, 2911, 3306 |
| Asp718I | GGTACC | 1 cut(s) | 3336 |
| AspLEI | GCGC | 1 cut(s) | 3357 |
| AspS9I | GGNCC | 6 cut(s) | 214, 392, 531, 631, 1181, 2647 |
| AsuC2I | CCSGG | 6 cut(s) | 635, 812, 1185, 1746, 1931, 3063 |
| AsuHPI | GGTGA | 5 cut(s) | 296, 559, 1725, 1760, 3422 |
| AvaI | CYCGRG | 1 cut(s) | 2129 |
| AvaII | GGWCC | 5 cut(s) | 214, 392, 631, 1181, 2647 |
| AxyI | CCTNAGG | 1 cut(s) | 1326 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 629, 662 |
| BalI | TGGCCA | 1 cut(s) | 312 |
| BanI | GGYRCC | 2 cut(s) | 172, 3336 |
| BanII | GRGCYC | 2 cut(s) | 2529, 3615 |
| BauI | CACGAG | 1 cut(s) | 804 |
| BbsI | GAAGAC | 2 cut(s) | 335, 2352 |
| Bbv12I | GWGCWC | 2 cut(s) | 1638, 3615 |
| BbvCI | CCTCAGC | 1 cut(s) | 588 |
| BbvI | GCAGC | 6 cut(s) | 310, 591, 2232, 2591, 3069, 3479 |
| BccI | CCATC | 4 cut(s) | 678, 2731, 2945, 3469 |
| BceAI | ACGGC | 1 cut(s) | 188 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 437, 471, 1052, 1086, 2110, 2144 |
| BciT130I | CCWGG | 1 cut(s) | 2811 |
| BciVI | GTATCC | 1 cut(s) | 795 |
| BclI | TGATCA | 3 cut(s) | 2767, 3244, 3391 |
| BcnI | CCSGG | 6 cut(s) | 635, 812, 1185, 1746, 1931, 3063 |
| BcoDI | GTCTC | 1 cut(s) | 2126 |
| BcuI | ACTAGT | 2 cut(s) | 3211, 3379 |
| BfaI | CTAG | 6 cut(s) | 12, 1209, 2186, 3005, 3212, 3380 |
| BfmI | CTRYAG | 2 cut(s) | 789, 3083 |
| BfuI | GTATCC | 1 cut(s) | 795 |
| BglII | AGATCT | 2 cut(s) | 3259, 3500 |
| BisI | GCNGC | 7 cut(s) | 324, 580, 2221, 2605, 3083, 3468, 3528 |
| BlpI | GCTNAGC | 1 cut(s) | 1052 |
| BlsI | GCNGC | 7 cut(s) | 325, 581, 2222, 2606, 3084, 3469, 3529 |
| BmcAI | AGTACT | 1 cut(s) | 127 |
| Bme1390I | CCNGG | 7 cut(s) | 635, 812, 1185, 1746, 1931, 2811, 3063 |
| Bme18I | GGWCC | 5 cut(s) | 214, 392, 631, 1181, 2647 |
| BmeT110I | CYCGRG | 1 cut(s) | 2129 |
| BmgT120I | GGNCC | 6 cut(s) | 214, 392, 531, 631, 1181, 2647 |
| BmiI | GGNNCC | 4 cut(s) | 174, 2158, 3338, 3364 |
| BmrFI | CCNGG | 7 cut(s) | 635, 812, 1185, 1746, 1931, 2811, 3063 |
| BmrI | ACTGGG | 2 cut(s) | 1610, 3124 |
| BmsI | GCATC | 6 cut(s) | 607, 1432, 2232, 2750, 2857, 3021 |
| BmuI | ACTGGG | 2 cut(s) | 1610, 3124 |
| BpiI | GAAGAC | 2 cut(s) | 335, 2352 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 640, 672 |
| Bpu10I | CCTNAGC | 3 cut(s) | 105, 588, 2370 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1052 |
| BpuEI | CTTGAG | 4 cut(s) | 292, 1124, 2273, 2693 |
| BpuMI | CCSGG | 6 cut(s) | 635, 812, 1185, 1746, 1931, 3063 |
| Bsa29I | ATCGAT | 1 cut(s) | 931 |
| BsaAI | YACGTR | 1 cut(s) | 296 |
| BsaBI | GATNNNNATC | 3 cut(s) | 24, 1131, 1218 |
| BsaI | GGTCTC | 1 cut(s) | 2126 |
| BsaJI | CCNNGG | 7 cut(s) | 30, 168, 217, 2160, 3062, 3358, 3366 |
| BsaWI | WCCGGW | 5 cut(s) | 211, 694, 2359, 2795, 3222 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3657, 3687 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 189, 218, 468, 989, 1327, 1705 |
| Bse118I | RCCGGY | 1 cut(s) | 2359 |
| Bse1I | ACTGG | 5 cut(s) | 313, 801, 1616, 1861, 3119 |
| Bse21I | CCTNAGG | 1 cut(s) | 1326 |
| Bse3DI | GCAATG | 2 cut(s) | 600, 1063 |
| Bse8I | GATNNNNATC | 3 cut(s) | 24, 1131, 1218 |
| BseAI | TCCGGA | 1 cut(s) | 694 |
| BseBI | CCWGG | 1 cut(s) | 2811 |
| BseCI | ATCGAT | 1 cut(s) | 931 |
| BseDI | CCNNGG | 7 cut(s) | 30, 168, 217, 2160, 3062, 3358, 3366 |
| BseGI | GGATG | 9 cut(s) | 40, 492, 689, 1336, 1594, 1783, 2303, 2731, 2848 |
| BseJI | GATNNNNATC | 3 cut(s) | 24, 1131, 1218 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 189, 218, 468, 989, 1327, 1705 |
| BseMI | GCAATG | 2 cut(s) | 600, 1063 |
| BseMII | CTCAG | 7 cut(s) | 101, 579, 677, 1043, 1953, 2361, 2853 |
| BseNI | ACTGG | 5 cut(s) | 313, 801, 1616, 1861, 3119 |
| BseRI | GAGGAG | 1 cut(s) | 3665 |
| BseXI | GCAGC | 6 cut(s) | 310, 591, 2232, 2591, 3069, 3479 |
| BsgI | GTGCAG | 2 cut(s) | 632, 1059 |
| Bsh1236I | CGCG | 2 cut(s) | 2538, 3488 |
| BshFI | GGCC | 5 cut(s) | 5, 312, 532, 1377, 2153 |
| BshNI | GGYRCC | 2 cut(s) | 172, 3336 |
| BshTI | ACCGGT | 1 cut(s) | 2359 |
| BshVI | ATCGAT | 1 cut(s) | 931 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1638, 3615 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2129 |
| BslFI | GGGAC | 3 cut(s) | 191, 1633, 2408 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 189, 218, 468, 989, 1327, 1705 |
| BsmAI | GTCTC | 1 cut(s) | 2126 |
| BsmFI | GGGAC | 3 cut(s) | 191, 1633, 2408 |
| BsmI | GAATGC | 2 cut(s) | 205, 2699 |
| BsnI | GGCC | 5 cut(s) | 5, 312, 532, 1377, 2153 |
| Bso31I | GGTCTC | 1 cut(s) | 2126 |
| BsoBI | CYCGRG | 1 cut(s) | 2129 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1638, 2529, 3615 |
| Bsp13I | TCCGGA | 1 cut(s) | 694 |
| Bsp1407I | TGTACA | 1 cut(s) | 1783 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1052 |
| Bsp19I | CCATGG | 1 cut(s) | 2160 |
| BspACI | CCGC | 2 cut(s) | 3010, 3527 |
| BspANI | GGCC | 5 cut(s) | 5, 312, 532, 1377, 2153 |
| BspCNI | CTCAG | 7 cut(s) | 102, 580, 676, 1044, 1952, 2362, 2854 |
| BspDI | ATCGAT | 1 cut(s) | 931 |
| BspEI | TCCGGA | 1 cut(s) | 694 |
| BspFNI | CGCG | 2 cut(s) | 2538, 3488 |
| BspHI | TCATGA | 3 cut(s) | 1999, 3040, 3298 |
| BspLI | GGNNCC | 4 cut(s) | 174, 2158, 3338, 3364 |
| BspMAI | CTGCAG | 1 cut(s) | 3087 |
| BspPI | GGATC | 7 cut(s) | 95, 1140, 1852, 2469, 2852, 3303, 3437 |
| BspQI | GCTCTTC | 1 cut(s) | 3129 |
| BspT107I | GGYRCC | 2 cut(s) | 172, 3336 |
| BspTNI | GGTCTC | 1 cut(s) | 2126 |
| BsrDI | GCAATG | 2 cut(s) | 600, 1063 |
| BsrFI | RCCGGY | 1 cut(s) | 2359 |
| BsrGI | TGTACA | 1 cut(s) | 1783 |
| BsrI | ACTGG | 5 cut(s) | 313, 801, 1616, 1861, 3119 |
| BssAI | RCCGGY | 1 cut(s) | 2359 |
| BssECI | CCNNGG | 7 cut(s) | 30, 168, 217, 2160, 3062, 3358, 3366 |
| BssSI | CACGAG | 1 cut(s) | 804 |
| BssT1I | CCWWGG | 5 cut(s) | 30, 217, 2160, 3358, 3366 |
| Bst2BI | CACGAG | 1 cut(s) | 804 |
| Bst2UI | CCWGG | 1 cut(s) | 2811 |
| Bst4CI | ACNGT | 5 cut(s) | 130, 365, 898, 1396, 3126 |
| Bst6I | CTCTTC | 6 cut(s) | 378, 1020, 1425, 1848, 2217, 3129 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2594 |
| BstAUI | TGTACA | 1 cut(s) | 1783 |
| BstBAI | YACGTR | 1 cut(s) | 296 |
| BstC8I | GCNNGC | 2 cut(s) | 1356, 2669 |
| BstDSI | CCRYGG | 1 cut(s) | 2160 |
| BstF5I | GGATG | 9 cut(s) | 40, 492, 689, 1336, 1594, 1783, 2303, 2731, 2848 |
| BstFNI | CGCG | 2 cut(s) | 2538, 3488 |
| BstHHI | GCGC | 1 cut(s) | 3357 |
| BstMAI | GTCTC | 1 cut(s) | 2126 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1684, 2594, 2930, 3118 |
| BstNI | CCWGG | 1 cut(s) | 2811 |
| BstNSI | RCATGY | 5 cut(s) | 1554, 1790, 2499, 3597, 3671 |
| BstSCI | CCNGG | 7 cut(s) | 633, 810, 1183, 1744, 1929, 2809, 3061 |
| BstSFI | CTRYAG | 2 cut(s) | 789, 3083 |
| BstUI | CGCG | 2 cut(s) | 2538, 3488 |
| BstV1I | GCAGC | 6 cut(s) | 310, 591, 2232, 2591, 3069, 3479 |
| BstV2I | GAAGAC | 2 cut(s) | 335, 2352 |
| BstX2I | RGATCY | 6 cut(s) | 100, 1857, 2461, 3259, 3429, 3500 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 252, 3651 |
| BstYI | RGATCY | 6 cut(s) | 100, 1857, 2461, 3259, 3429, 3500 |
| Bsu15I | ATCGAT | 1 cut(s) | 931 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1326 |
| BsuI | GTATCC | 1 cut(s) | 795 |
| BsuRI | GGCC | 5 cut(s) | 5, 312, 532, 1377, 2153 |
| BsuTUI | ATCGAT | 1 cut(s) | 931 |
| BtgI | CCRYGG | 1 cut(s) | 2160 |
| BtsCI | GGATG | 9 cut(s) | 40, 492, 689, 1336, 1594, 1783, 2303, 2731, 2848 |
| BtsI | GCAGTG | 1 cut(s) | 1638 |
| BtsIMutI | CAGTG | 6 cut(s) | 1623, 1638, 2093, 2908, 3112, 3131 |
| Cac8I | GCNNGC | 2 cut(s) | 1356, 2669 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2265 |
| CciI | TCATGA | 3 cut(s) | 1999, 3040, 3298 |
| CfoI | GCGC | 1 cut(s) | 3357 |
| Cfr10I | RCCGGY | 1 cut(s) | 2359 |
| Cfr13I | GGNCC | 6 cut(s) | 214, 392, 531, 631, 1181, 2647 |
| ClaI | ATCGAT | 1 cut(s) | 931 |
| CseI | GACGC | 3 cut(s) | 447, 1712, 3494 |
| Csp6I | GTAC | 8 cut(s) | 126, 638, 1612, 1784, 2357, 2712, 2804, 3337 |
| CspAI | ACCGGT | 1 cut(s) | 2359 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2062, 2097, 3171, 3206 |
| CviQI | GTAC | 8 cut(s) | 126, 638, 1612, 1784, 2357, 2712, 2804, 3337 |
| EaeI | YGGCCR | 1 cut(s) | 310 |
| Eam1104I | CTCTTC | 6 cut(s) | 378, 1020, 1425, 1848, 2217, 3129 |
| EarI | CTCTTC | 6 cut(s) | 378, 1020, 1425, 1848, 2217, 3129 |
| Ecl136II | GAGCTC | 1 cut(s) | 3613 |
| Eco130I | CCWWGG | 5 cut(s) | 30, 217, 2160, 3358, 3366 |
| Eco147I | AGGCCT | 1 cut(s) | 1377 |
| Eco24I | GRGCYC | 2 cut(s) | 2529, 3615 |
| Eco31I | GGTCTC | 1 cut(s) | 2126 |
| Eco32I | GATATC | 1 cut(s) | 739 |
| Eco47I | GGWCC | 5 cut(s) | 214, 392, 631, 1181, 2647 |
| Eco53kI | GAGCTC | 1 cut(s) | 3613 |
| Eco57I | CTGAAG | 1 cut(s) | 540 |
| Eco81I | CCTNAGG | 1 cut(s) | 1326 |
| Eco88I | CYCGRG | 1 cut(s) | 2129 |
| EcoICRI | GAGCTC | 1 cut(s) | 3613 |
| EcoRI | GAATTC | 3 cut(s) | 1303, 1464, 2911 |
| EcoRII | CCWGG | 1 cut(s) | 2809 |
| EcoRV | GATATC | 1 cut(s) | 739 |
| EcoT14I | CCWWGG | 5 cut(s) | 30, 217, 2160, 3358, 3366 |
| EcoT22I | ATGCAT | 4 cut(s) | 600, 822, 1447, 1689 |
| EcoT38I | GRGCYC | 2 cut(s) | 2529, 3615 |
| ErhI | CCWWGG | 5 cut(s) | 30, 217, 2160, 3358, 3366 |
| FaqI | GGGAC | 3 cut(s) | 191, 1633, 2408 |
| FauNDI | CATATG | 1 cut(s) | 2241 |
| FbaI | TGATCA | 3 cut(s) | 2767, 3244, 3391 |
| Fnu4HI | GCNGC | 7 cut(s) | 324, 580, 2221, 2605, 3083, 3468, 3528 |
| FokI | GGATG | 9 cut(s) | 47, 479, 696, 1343, 1601, 1790, 2290, 2738, 2835 |
| FriOI | GRGCYC | 2 cut(s) | 2529, 3615 |
| Fsp4HI | GCNGC | 7 cut(s) | 324, 580, 2221, 2605, 3083, 3468, 3528 |
| FspBI | CTAG | 6 cut(s) | 12, 1209, 2186, 3005, 3212, 3380 |
| GlaI | GCGC | 1 cut(s) | 3356 |
| GluI | GCNGC | 7 cut(s) | 324, 580, 2221, 2605, 3083, 3468, 3528 |
| HaeIII | GGCC | 5 cut(s) | 5, 312, 532, 1377, 2153 |
| HgaI | GACGC | 3 cut(s) | 447, 1712, 3494 |
| HhaI | GCGC | 1 cut(s) | 3357 |
| Hin6I | GCGC | 1 cut(s) | 3355 |
| HinP1I | GCGC | 1 cut(s) | 3355 |
| HincII | GTYRAC | 2 cut(s) | 2295, 2515 |
| HindII | GTYRAC | 2 cut(s) | 2295, 2515 |
| HindIII | AAGCTT | 3 cut(s) | 94, 1281, 2024 |
| HpaI | GTTAAC | 1 cut(s) | 2515 |
| HphI | GGTGA | 5 cut(s) | 296, 559, 1725, 1760, 3422 |
| Hpy166II | GTNNAC | 5 cut(s) | 82, 1751, 2295, 2445, 2515 |
| Hpy8I | GTNNAC | 5 cut(s) | 82, 1751, 2295, 2445, 2515 |
| HpyCH4III | ACNGT | 5 cut(s) | 130, 365, 898, 1396, 3126 |
| HpyCH4IV | ACGT | 3 cut(s) | 295, 3325, 3551 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1684, 2594, 2930, 3118 |
| HpySE526I | ACGT | 3 cut(s) | 295, 3325, 3551 |
| HspAI | GCGC | 1 cut(s) | 3355 |
| Kpn2I | TCCGGA | 1 cut(s) | 694 |
| KpnI | GGTACC | 1 cut(s) | 3340 |
| Ksp22I | TGATCA | 3 cut(s) | 2767, 3244, 3391 |
| KspAI | GTTAAC | 1 cut(s) | 2515 |
| LguI | GCTCTTC | 1 cut(s) | 3129 |
| LmnI | GCTCC | 4 cut(s) | 2357, 2679, 3362, 3610 |
| Lsp1109I | GCAGC | 6 cut(s) | 310, 591, 2232, 2591, 3069, 3479 |
| LweI | GCATC | 6 cut(s) | 607, 1432, 2232, 2750, 2857, 3021 |
| MaeI | CTAG | 6 cut(s) | 12, 1209, 2186, 3005, 3212, 3380 |
| MaeII | ACGT | 3 cut(s) | 295, 3325, 3551 |
| MaeIII | GTNAC | 3 cut(s) | 257, 1604, 3373 |
| MfeI | CAATTG | 1 cut(s) | 921 |
| MflI | RGATCY | 6 cut(s) | 100, 1857, 2461, 3259, 3429, 3500 |
| MhlI | GDGCHC | 3 cut(s) | 1638, 2529, 3615 |
| MlsI | TGGCCA | 1 cut(s) | 312 |
| MluNI | TGGCCA | 1 cut(s) | 312 |
| MlyI | GAGTC | 3 cut(s) | 428, 2397, 2801 |
| MmeI | TCCRAC | 6 cut(s) | 1280, 1990, 2516, 2600, 2876, 3232 |
| Mox20I | TGGCCA | 1 cut(s) | 312 |
| Mph1103I | ATGCAT | 4 cut(s) | 600, 822, 1447, 1689 |
| MroI | TCCGGA | 1 cut(s) | 694 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1014, 1307, 1464, 2911, 3306 |
| MscI | TGGCCA | 1 cut(s) | 312 |
| MslI | CAYNNNNRTG | 4 cut(s) | 170, 318, 603, 1776 |
| Msp20I | TGGCCA | 1 cut(s) | 312 |
| MspR9I | CCNGG | 7 cut(s) | 635, 812, 1185, 1746, 1931, 2811, 3063 |
| MunI | CAATTG | 1 cut(s) | 921 |
| Mva1269I | GAATGC | 2 cut(s) | 205, 2699 |
| MvaI | CCWGG | 1 cut(s) | 2811 |
| MvnI | CGCG | 2 cut(s) | 2538, 3488 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1684, 2594, 2930, 3118 |
| NciI | CCSGG | 6 cut(s) | 635, 812, 1185, 1746, 1931, 3063 |
| NcoI | CCATGG | 1 cut(s) | 2160 |
| NdeI | CATATG | 1 cut(s) | 2241 |
| NlaIV | GGNNCC | 4 cut(s) | 174, 2158, 3338, 3364 |
| NmuCI | GTSAC | 1 cut(s) | 1604 |
| NsiI | ATGCAT | 4 cut(s) | 600, 822, 1447, 1689 |
| NspI | RCATGY | 5 cut(s) | 1554, 1790, 2499, 3597, 3671 |
| OliI | CACNNNNGTG | 1 cut(s) | 170 |
| PaeR7I | CTCGAG | 1 cut(s) | 2129 |
| PagI | TCATGA | 3 cut(s) | 1999, 3040, 3298 |
| PceI | AGGCCT | 1 cut(s) | 1377 |
| PciI | ACATGT | 4 cut(s) | 1786, 2495, 3593, 3667 |
| PciSI | GCTCTTC | 1 cut(s) | 3129 |
| PctI | GAATGC | 2 cut(s) | 205, 2699 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1014, 1307, 1464, 2911, 3306 |
| PfeI | GAWTC | 8 cut(s) | 509, 550, 707, 800, 1730, 1996, 2003, 2425 |
| PflFI | GACNNNGTC | 1 cut(s) | 3493 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1705 |
| PfoI | TCCNGGA | 3 cut(s) | 810, 1929, 2809 |
| PinAI | ACCGGT | 1 cut(s) | 2359 |
| PkrI | GCNGC | 7 cut(s) | 325, 581, 2222, 2606, 3084, 3469, 3529 |
| PleI | GAGTC | 3 cut(s) | 427, 2396, 2800 |
| PpsI | GAGTC | 3 cut(s) | 427, 2396, 2800 |
| Ppu21I | YACGTR | 1 cut(s) | 296 |
| PscI | ACATGT | 4 cut(s) | 1786, 2495, 3593, 3667 |
| PsiI | TTATAA | 1 cut(s) | 2973 |
| Psp124BI | GAGCTC | 1 cut(s) | 3615 |
| Psp6I | CCWGG | 1 cut(s) | 2809 |
| PspGI | CCWGG | 1 cut(s) | 2809 |
| PspN4I | GGNNCC | 4 cut(s) | 174, 2158, 3338, 3364 |
| PspPI | GGNCC | 6 cut(s) | 214, 392, 531, 631, 1181, 2647 |
| PstI | CTGCAG | 1 cut(s) | 3087 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2265 |
| PsuI | RGATCY | 6 cut(s) | 100, 1857, 2461, 3259, 3429, 3500 |
| PsyI | GACNNNGTC | 1 cut(s) | 3493 |
| RsaI | GTAC | 8 cut(s) | 127, 639, 1613, 1785, 2358, 2713, 2805, 3338 |
| RsaNI | GTAC | 8 cut(s) | 126, 638, 1612, 1784, 2357, 2712, 2804, 3337 |
| RseI | CAYNNNNRTG | 4 cut(s) | 170, 318, 603, 1776 |
| SacI | GAGCTC | 1 cut(s) | 3615 |
| SapI | GCTCTTC | 1 cut(s) | 3129 |
| SatI | GCNGC | 7 cut(s) | 324, 580, 2221, 2605, 3083, 3468, 3528 |
| Sau96I | GGNCC | 6 cut(s) | 214, 392, 531, 631, 1181, 2647 |
| ScaI | AGTACT | 1 cut(s) | 127 |
| SchI | GAGTC | 3 cut(s) | 428, 2397, 2801 |
| ScrFI | CCNGG | 7 cut(s) | 635, 812, 1185, 1746, 1931, 2811, 3063 |
| SduI | GDGCHC | 3 cut(s) | 1638, 2529, 3615 |
| SfaNI | GCATC | 6 cut(s) | 607, 1432, 2232, 2750, 2857, 3021 |
| SfcI | CTRYAG | 2 cut(s) | 789, 3083 |
| Sfr274I | CTCGAG | 1 cut(s) | 2129 |
| SinI | GGWCC | 5 cut(s) | 214, 392, 631, 1181, 2647 |
| SlaI | CTCGAG | 1 cut(s) | 2129 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 170, 318, 603, 1776 |
| SmlI | CTYRAG | 5 cut(s) | 271, 1139, 2129, 2252, 2672 |
| SmoI | CTYRAG | 5 cut(s) | 271, 1139, 2129, 2252, 2672 |
| SpeI | ACTAGT | 2 cut(s) | 3211, 3379 |
| SseBI | AGGCCT | 1 cut(s) | 1377 |
| SsiI | CCGC | 2 cut(s) | 3010, 3527 |
| SspI | AATATT | 3 cut(s) | 727, 2321, 2821 |
| SspMI | CTAG | 6 cut(s) | 12, 1209, 2186, 3005, 3212, 3380 |
| SstI | GAGCTC | 1 cut(s) | 3615 |
| StuI | AGGCCT | 1 cut(s) | 1377 |
| StyD4I | CCNGG | 7 cut(s) | 633, 810, 1183, 1744, 1929, 2809, 3061 |
| StyI | CCWWGG | 5 cut(s) | 30, 217, 2160, 3358, 3366 |
| TaaI | ACNGT | 5 cut(s) | 130, 365, 898, 1396, 3126 |
| TaiI | ACGT | 3 cut(s) | 298, 3328, 3554 |
| TaqI | TCGA | 7 cut(s) | 931, 1062, 1822, 2130, 2386, 2790, 2915 |
| TaqII | GACCGA | 1 cut(s) | 1335 |
| TatI | WGTACW | 4 cut(s) | 125, 1783, 2711, 2803 |
| TauI | GCSGC | 1 cut(s) | 3530 |
| TfiI | GAWTC | 8 cut(s) | 509, 550, 707, 800, 1730, 1996, 2003, 2425 |
| TscAI | CASTG | 6 cut(s) | 1623, 1638, 2100, 2908, 3119, 3131 |
| TseFI | GTSAC | 1 cut(s) | 1604 |
| TseI | GCWGC | 6 cut(s) | 323, 579, 2220, 2604, 3082, 3467 |
| Tsp45I | GTSAC | 1 cut(s) | 1604 |
| TspGWI | ACGGA | 2 cut(s) | 1371, 2344 |
| TspRI | CASTG | 6 cut(s) | 1623, 1638, 2100, 2908, 3119, 3131 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3493 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1705 |
| VpaK11BI | GGWCC | 5 cut(s) | 214, 392, 631, 1181, 2647 |
| XapI | RAATTY | 8 cut(s) | 1271, 1303, 1464, 1951, 2559, 2896, 2911, 3164 |
| XbaI | TCTAGA | 1 cut(s) | 2185 |
| XceI | RCATGY | 5 cut(s) | 1554, 1790, 2499, 3597, 3671 |
| XhoI | CTCGAG | 1 cut(s) | 2129 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1014, 1307, 1464, 2911, 3306 |
| XspI | CTAG | 6 cut(s) | 12, 1209, 2186, 3005, 3212, 3380 |
| ZrmI | AGTACT | 1 cut(s) | 127 |
| Zsp2I | ATGCAT | 4 cut(s) | 600, 822, 1447, 1689 |