TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 22 - 191 | 1.4e-52 | TIR domain |
| TIR_2 | PF13676 | 24 - 120 | 4.1e-14 | TIR domain |
| NB-ARC | PF00931 | 218 - 374 | 2.2e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 442 - 514 | 5.7e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 633 - 815 | 8.7e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 791 - 879 | 3.6e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 799 - 1008 | 4.9e-16 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1718, 3652 |
| Acc36I | ACCTGC | 1 cut(s) | 3377 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1572, 3420 |
| AccBSI | CCGCTC | 2 cut(s) | 504, 2907 |
| AccI | GTMKAC | 3 cut(s) | 658, 970, 2385 |
| AccII | CGCG | 1 cut(s) | 2762 |
| AccIII | TCCGGA | 1 cut(s) | 3621 |
| AcoI | YGGCCR | 3 cut(s) | 3, 335, 3482 |
| AcuI | CTGAAG | 2 cut(s) | 2079, 2694 |
| AcvI | CACGTG | 1 cut(s) | 2822 |
| AcyI | GRCGYC | 1 cut(s) | 2775 |
| AfaI | GTAC | 6 cut(s) | 568, 1776, 1999, 2212, 2489, 2630 |
| AfeI | AGCGCT | 1 cut(s) | 1197 |
| AflIII | ACRYGT | 1 cut(s) | 3518 |
| AgeI | ACCGGT | 2 cut(s) | 50, 3243 |
| AhlI | ACTAGT | 1 cut(s) | 289 |
| AjnI | CCWGG | 4 cut(s) | 1552, 2337, 2374, 3632 |
| AleI | CACNNNNGTG | 1 cut(s) | 1219 |
| Alw21I | GWGCWC | 2 cut(s) | 3123, 3132 |
| Alw26I | GTCTC | 5 cut(s) | 55, 375, 550, 3061, 3413 |
| Alw44I | GTGCAC | 1 cut(s) | 3119 |
| Ama87I | CYCGRG | 1 cut(s) | 499 |
| Aor13HI | TCCGGA | 1 cut(s) | 3621 |
| Aor51HI | AGCGCT | 1 cut(s) | 1197 |
| AoxI | GGCC | 5 cut(s) | 3, 335, 1183, 1458, 3482 |
| ApaLI | GTGCAC | 1 cut(s) | 3119 |
| ApeKI | GCWGC | 7 cut(s) | 458, 473, 716, 753, 1857, 2910, 3454 |
| AsiGI | ACCGGT | 2 cut(s) | 50, 3243 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 204, 291, 2679 |
| AspLEI | GCGC | 2 cut(s) | 1198, 2846 |
| AspS9I | GGNCC | 3 cut(s) | 946, 1459, 3574 |
| AsuHPI | GGTGA | 8 cut(s) | 404, 662, 2009, 2222, 2294, 2327, 2749, 3233 |
| AsuII | TTCGAA | 1 cut(s) | 2996 |
| AvaI | CYCGRG | 1 cut(s) | 499 |
| AvaII | GGWCC | 2 cut(s) | 946, 3574 |
| AxyI | CCTNAGG | 1 cut(s) | 2888 |
| BaeGI | GKGCMC | 2 cut(s) | 2821, 3123 |
| BalI | TGGCCA | 2 cut(s) | 5, 3484 |
| BamHI | GGATCC | 4 cut(s) | 355, 2102, 2243, 2315 |
| BanII | GRGCYC | 1 cut(s) | 3132 |
| BauI | CACGAG | 1 cut(s) | 2914 |
| BbrPI | CACGTG | 1 cut(s) | 2822 |
| BbsI | GAAGAC | 2 cut(s) | 238, 3606 |
| Bbv12I | GWGCWC | 2 cut(s) | 3123, 3132 |
| BbvI | GCAGC | 7 cut(s) | 460, 470, 703, 740, 1869, 2897, 3441 |
| BccI | CCATC | 6 cut(s) | 14, 444, 740, 1253, 3040, 3085 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 242, 276, 2902, 2936 |
| BciT130I | CCWGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| BciVI | GTATCC | 1 cut(s) | 88 |
| BclI | TGATCA | 1 cut(s) | 3388 |
| BcoDI | GTCTC | 5 cut(s) | 55, 375, 550, 3061, 3413 |
| BcuI | ACTAGT | 1 cut(s) | 289 |
| BfaI | CTAG | 6 cut(s) | 290, 836, 1073, 1434, 1505, 1937 |
| BfoI | RGCGCY | 2 cut(s) | 1199, 2847 |
| BfuAI | ACCTGC | 1 cut(s) | 3377 |
| BfuI | GTATCC | 1 cut(s) | 88 |
| BglII | AGATCT | 1 cut(s) | 2578 |
| BlpI | GCTNAGC | 1 cut(s) | 3126 |
| Bme1390I | CCNGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| Bme18I | GGWCC | 2 cut(s) | 946, 3574 |
| BmeT110I | CYCGRG | 1 cut(s) | 499 |
| BmgT120I | GGNCC | 3 cut(s) | 946, 1459, 3574 |
| BmiI | GGNNCC | 8 cut(s) | 357, 2104, 2245, 2317, 2730, 3201, 3575, 3626 |
| BmrFI | CCNGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| BpiI | GAAGAC | 2 cut(s) | 238, 3606 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 445, 477, 3119, 3151 |
| BpmI | CTGGAG | 4 cut(s) | 2410, 2453, 2633, 3085 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3126 |
| Bpu14I | TTCGAA | 1 cut(s) | 2996 |
| BpuEI | CTTGAG | 3 cut(s) | 1164, 2500, 3560 |
| Bsa29I | ATCGAT | 1 cut(s) | 940 |
| BsaAI | YACGTR | 2 cut(s) | 2822, 3519 |
| BsaBI | GATNNNNATC | 2 cut(s) | 171, 936 |
| BsaHI | GRCGYC | 1 cut(s) | 2775 |
| BsaI | GGTCTC | 1 cut(s) | 550 |
| BsaJI | CCNNGG | 3 cut(s) | 179, 301, 3633 |
| BsaWI | WCCGGW | 4 cut(s) | 50, 592, 3243, 3621 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 786, 816, 3058, 3088 |
| Bse118I | RCCGGY | 3 cut(s) | 50, 2955, 3243 |
| Bse1I | ACTGG | 8 cut(s) | 949, 1043, 1326, 2058, 2130, 2393, 2500, 3182 |
| Bse21I | CCTNAGG | 1 cut(s) | 2888 |
| Bse3DI | GCAATG | 3 cut(s) | 1353, 2507, 3503 |
| Bse8I | GATNNNNATC | 2 cut(s) | 171, 936 |
| BseAI | TCCGGA | 1 cut(s) | 3621 |
| BseBI | CCWGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| BseCI | ATCGAT | 1 cut(s) | 940 |
| BseDI | CCNNGG | 3 cut(s) | 179, 301, 3633 |
| BseJI | GATNNNNATC | 2 cut(s) | 171, 936 |
| BseMI | GCAATG | 3 cut(s) | 1353, 2507, 3503 |
| BseMII | CTCAG | 5 cut(s) | 68, 2879, 3117, 3167, 3409 |
| BseNI | ACTGG | 8 cut(s) | 949, 1043, 1326, 2058, 2130, 2393, 2500, 3182 |
| BseRI | GAGGAG | 4 cut(s) | 25, 2096, 2309, 3056 |
| BseSI | GKGCMC | 2 cut(s) | 2821, 3123 |
| BseXI | GCAGC | 7 cut(s) | 460, 470, 703, 740, 1869, 2897, 3441 |
| BsgI | GTGCAG | 3 cut(s) | 1243, 2896, 3440 |
| Bsh1236I | CGCG | 1 cut(s) | 2762 |
| BshFI | GGCC | 5 cut(s) | 5, 337, 1185, 1460, 3484 |
| BshTI | ACCGGT | 2 cut(s) | 50, 3243 |
| BshVI | ATCGAT | 1 cut(s) | 940 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3123, 3132 |
| BsiHKCI | CYCGRG | 1 cut(s) | 499 |
| BsiSI | CCGG | 5 cut(s) | 51, 593, 2956, 3244, 3622 |
| BslFI | GGGAC | 2 cut(s) | 2681, 3299 |
| BsmAI | GTCTC | 5 cut(s) | 55, 375, 550, 3061, 3413 |
| BsmFI | GGGAC | 2 cut(s) | 2681, 3299 |
| BsmI | GAATGC | 4 cut(s) | 263, 2357, 2433, 2870 |
| BsnI | GGCC | 5 cut(s) | 5, 337, 1185, 1460, 3484 |
| Bso31I | GGTCTC | 1 cut(s) | 550 |
| BsoBI | CYCGRG | 1 cut(s) | 499 |
| Bsp119I | TTCGAA | 1 cut(s) | 2996 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2821, 3123, 3132 |
| Bsp13I | TCCGGA | 1 cut(s) | 3621 |
| Bsp1407I | TGTACA | 2 cut(s) | 1997, 2210 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3126 |
| BspANI | GGCC | 5 cut(s) | 5, 337, 1185, 1460, 3484 |
| BspCNI | CTCAG | 5 cut(s) | 69, 2880, 3118, 3166, 3408 |
| BspDI | ATCGAT | 1 cut(s) | 940 |
| BspEI | TCCGGA | 1 cut(s) | 3621 |
| BspFNI | CGCG | 1 cut(s) | 2762 |
| BspHI | TCATGA | 2 cut(s) | 1081, 1531 |
| BspLI | GGNNCC | 8 cut(s) | 357, 2104, 2245, 2317, 2730, 3201, 3575, 3626 |
| BspMI | ACCTGC | 1 cut(s) | 3377 |
| BspQI | GCTCTTC | 1 cut(s) | 3137 |
| BspT104I | TTCGAA | 1 cut(s) | 2996 |
| BspTNI | GGTCTC | 1 cut(s) | 550 |
| BsrBI | CCGCTC | 2 cut(s) | 504, 2907 |
| BsrDI | GCAATG | 3 cut(s) | 1353, 2507, 3503 |
| BsrFI | RCCGGY | 3 cut(s) | 50, 2955, 3243 |
| BsrGI | TGTACA | 2 cut(s) | 1997, 2210 |
| BsrI | ACTGG | 8 cut(s) | 949, 1043, 1326, 2058, 2130, 2393, 2500, 3182 |
| BssAI | RCCGGY | 3 cut(s) | 50, 2955, 3243 |
| BssECI | CCNNGG | 3 cut(s) | 179, 301, 3633 |
| BssNAI | GTATAC | 1 cut(s) | 659 |
| BssNI | GRCGYC | 1 cut(s) | 2775 |
| BssSI | CACGAG | 1 cut(s) | 2914 |
| BssT1I | CCWWGG | 2 cut(s) | 179, 301 |
| Bst1107I | GTATAC | 1 cut(s) | 659 |
| Bst2BI | CACGAG | 1 cut(s) | 2914 |
| Bst2UI | CCWGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| Bst4CI | ACNGT | 5 cut(s) | 107, 1734, 2420, 3381, 3420 |
| Bst6I | CTCTTC | 4 cut(s) | 534, 1284, 1530, 3137 |
| BstACI | GRCGYC | 1 cut(s) | 2775 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1501, 1854 |
| BstAUI | TGTACA | 2 cut(s) | 1997, 2210 |
| BstBAI | YACGTR | 2 cut(s) | 2822, 3519 |
| BstBI | TTCGAA | 1 cut(s) | 2996 |
| BstC8I | GCNNGC | 6 cut(s) | 506, 1248, 1360, 1796, 1850, 3123 |
| BstFNI | CGCG | 1 cut(s) | 2762 |
| BstH2I | RGCGCY | 2 cut(s) | 1199, 2847 |
| BstHHI | GCGC | 2 cut(s) | 1198, 2846 |
| BstMAI | GTCTC | 5 cut(s) | 55, 375, 550, 3061, 3413 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 716, 1501, 1549, 1854, 3127, 3505 |
| BstNI | CCWGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| BstNSI | RCATGY | 4 cut(s) | 625, 1362, 1481, 1852 |
| BstSCI | CCNGG | 4 cut(s) | 1552, 2337, 2374, 3632 |
| BstSLI | GKGCMC | 2 cut(s) | 2821, 3123 |
| BstUI | CGCG | 1 cut(s) | 2762 |
| BstV1I | GCAGC | 7 cut(s) | 460, 470, 703, 740, 1869, 2897, 3441 |
| BstV2I | GAAGAC | 2 cut(s) | 238, 3606 |
| BstZ17I | GTATAC | 1 cut(s) | 659 |
| Bsu15I | ATCGAT | 1 cut(s) | 940 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2888 |
| BsuI | GTATCC | 1 cut(s) | 88 |
| BsuRI | GGCC | 5 cut(s) | 5, 337, 1185, 1460, 3484 |
| BsuTUI | ATCGAT | 1 cut(s) | 940 |
| BtsIMutI | CAGTG | 6 cut(s) | 1050, 1247, 1319, 2493, 3403, 3425 |
| BveI | ACCTGC | 1 cut(s) | 3377 |
| Cac8I | GCNNGC | 6 cut(s) | 506, 1248, 1360, 1796, 1850, 3123 |
| CciI | TCATGA | 2 cut(s) | 1081, 1531 |
| CfoI | GCGC | 2 cut(s) | 1198, 2846 |
| Cfr10I | RCCGGY | 3 cut(s) | 50, 2955, 3243 |
| Cfr13I | GGNCC | 3 cut(s) | 946, 1459, 3574 |
| ClaI | ATCGAT | 1 cut(s) | 940 |
| CseI | GACGC | 2 cut(s) | 2783, 3488 |
| Csp6I | GTAC | 6 cut(s) | 567, 1775, 1998, 2211, 2488, 2629 |
| CspAI | ACCGGT | 2 cut(s) | 50, 3243 |
| CviQI | GTAC | 6 cut(s) | 567, 1775, 1998, 2211, 2488, 2629 |
| DraI | TTTAAA | 2 cut(s) | 2007, 2220 |
| EaeI | YGGCCR | 3 cut(s) | 3, 335, 3482 |
| Eam1104I | CTCTTC | 4 cut(s) | 534, 1284, 1530, 3137 |
| EarI | CTCTTC | 4 cut(s) | 534, 1284, 1530, 3137 |
| Ecl136II | GAGCTC | 1 cut(s) | 3130 |
| Eco130I | CCWWGG | 2 cut(s) | 179, 301 |
| Eco147I | AGGCCT | 1 cut(s) | 1185 |
| Eco24I | GRGCYC | 1 cut(s) | 3132 |
| Eco31I | GGTCTC | 1 cut(s) | 550 |
| Eco32I | GATATC | 1 cut(s) | 2528 |
| Eco47I | GGWCC | 2 cut(s) | 946, 3574 |
| Eco47III | AGCGCT | 1 cut(s) | 1197 |
| Eco53kI | GAGCTC | 1 cut(s) | 3130 |
| Eco57I | CTGAAG | 2 cut(s) | 2079, 2694 |
| Eco72I | CACGTG | 1 cut(s) | 2822 |
| Eco81I | CCTNAGG | 1 cut(s) | 2888 |
| Eco88I | CYCGRG | 1 cut(s) | 499 |
| EcoICRI | GAGCTC | 1 cut(s) | 3130 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1459 |
| EcoRII | CCWGG | 4 cut(s) | 1552, 2337, 2374, 3632 |
| EcoRV | GATATC | 1 cut(s) | 2528 |
| EcoT14I | CCWWGG | 2 cut(s) | 179, 301 |
| EcoT22I | ATGCAT | 3 cut(s) | 265, 1497, 2870 |
| EcoT38I | GRGCYC | 1 cut(s) | 3132 |
| ErhI | CCWWGG | 2 cut(s) | 179, 301 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 609, 641 |
| FaqI | GGGAC | 2 cut(s) | 2681, 3299 |
| FauI | CCCGC | 4 cut(s) | 497, 882, 1764, 1803 |
| FbaI | TGATCA | 1 cut(s) | 3388 |
| FblI | GTMKAC | 3 cut(s) | 658, 970, 2385 |
| FriOI | GRGCYC | 1 cut(s) | 3132 |
| FspBI | CTAG | 6 cut(s) | 290, 836, 1073, 1434, 1505, 1937 |
| GlaI | GCGC | 2 cut(s) | 1197, 2845 |
| GsuI | CTGGAG | 4 cut(s) | 2410, 2453, 2633, 3085 |
| HaeII | RGCGCY | 2 cut(s) | 1199, 2847 |
| HaeIII | GGCC | 5 cut(s) | 5, 337, 1185, 1460, 3484 |
| HapII | CCGG | 5 cut(s) | 51, 593, 2956, 3244, 3622 |
| HgaI | GACGC | 2 cut(s) | 2783, 3488 |
| HhaI | GCGC | 2 cut(s) | 1198, 2846 |
| Hin1I | GRCGYC | 1 cut(s) | 2775 |
| Hin6I | GCGC | 2 cut(s) | 1196, 2844 |
| HinP1I | GCGC | 2 cut(s) | 1196, 2844 |
| HincII | GTYRAC | 3 cut(s) | 805, 1159, 2386 |
| HindII | GTYRAC | 3 cut(s) | 805, 1159, 2386 |
| HindIII | AAGCTT | 5 cut(s) | 1086, 2042, 2114, 2255, 2327 |
| HpaI | GTTAAC | 1 cut(s) | 1159 |
| HpaII | CCGG | 5 cut(s) | 51, 593, 2956, 3244, 3622 |
| HphI | GGTGA | 8 cut(s) | 404, 662, 2009, 2222, 2294, 2327, 2749, 3233 |
| Hpy99I | CGWCG | 1 cut(s) | 2777 |
| HpyCH4III | ACNGT | 5 cut(s) | 107, 1734, 2420, 3381, 3420 |
| HpyCH4IV | ACGT | 9 cut(s) | 366, 565, 1669, 1722, 2749, 2821, 3518, 3603, 3647 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 716, 1501, 1549, 1854, 3127, 3505 |
| HpySE526I | ACGT | 9 cut(s) | 366, 565, 1669, 1722, 2749, 2821, 3518, 3603, 3647 |
| Hsp92I | GRCGYC | 1 cut(s) | 2775 |
| HspAI | GCGC | 2 cut(s) | 1196, 2844 |
| Kpn2I | TCCGGA | 1 cut(s) | 3621 |
| Ksp22I | TGATCA | 1 cut(s) | 3388 |
| KspAI | GTTAAC | 1 cut(s) | 1159 |
| LguI | GCTCTTC | 1 cut(s) | 3137 |
| LmnI | GCTCC | 2 cut(s) | 2728, 3016 |
| Lsp1109I | GCAGC | 7 cut(s) | 460, 470, 703, 740, 1869, 2897, 3441 |
| MaeI | CTAG | 6 cut(s) | 290, 836, 1073, 1434, 1505, 1937 |
| MaeII | ACGT | 9 cut(s) | 366, 565, 1669, 1722, 2749, 2821, 3518, 3603, 3647 |
| MaeIII | GTNAC | 6 cut(s) | 1310, 1415, 1622, 1787, 2553, 2750 |
| MbiI | CCGCTC | 2 cut(s) | 504, 2907 |
| MfeI | CAATTG | 4 cut(s) | 11, 705, 729, 1766 |
| MhlI | GDGCHC | 3 cut(s) | 2821, 3123, 3132 |
| MlsI | TGGCCA | 2 cut(s) | 5, 3484 |
| MluNI | TGGCCA | 2 cut(s) | 5, 3484 |
| MmeI | TCCRAC | 8 cut(s) | 383, 2008, 2080, 2221, 2293, 2529, 2708, 3420 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 3484 |
| Mph1103I | ATGCAT | 3 cut(s) | 265, 1497, 2870 |
| MroI | TCCGGA | 1 cut(s) | 3621 |
| MroXI | GAANNNNTTC | 3 cut(s) | 204, 291, 2679 |
| MscI | TGGCCA | 2 cut(s) | 5, 3484 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1219, 1584, 3396 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 3484 |
| MspA1I | CMGCKG | 3 cut(s) | 990, 2780, 3216 |
| MspI | CCGG | 5 cut(s) | 51, 593, 2956, 3244, 3622 |
| MspR9I | CCNGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| MunI | CAATTG | 4 cut(s) | 11, 705, 729, 1766 |
| Mva1269I | GAATGC | 4 cut(s) | 263, 2357, 2433, 2870 |
| MvaI | CCWGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| MvnI | CGCG | 1 cut(s) | 2762 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 716, 1501, 1549, 1854, 3127, 3505 |
| NlaIV | GGNNCC | 8 cut(s) | 357, 2104, 2245, 2317, 2730, 3201, 3575, 3626 |
| NmuCI | GTSAC | 1 cut(s) | 2750 |
| NsiI | ATGCAT | 3 cut(s) | 265, 1497, 2870 |
| NspI | RCATGY | 4 cut(s) | 625, 1362, 1481, 1852 |
| NspV | TTCGAA | 1 cut(s) | 2996 |
| OliI | CACNNNNGTG | 1 cut(s) | 1219 |
| PaeI | GCATGC | 2 cut(s) | 1362, 1852 |
| PaeR7I | CTCGAG | 1 cut(s) | 499 |
| PagI | TCATGA | 2 cut(s) | 1081, 1531 |
| PceI | AGGCCT | 1 cut(s) | 1185 |
| PciSI | GCTCTTC | 1 cut(s) | 3137 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 249 |
| PctI | GAATGC | 4 cut(s) | 263, 2357, 2433, 2870 |
| PdmI | GAANNNNTTC | 3 cut(s) | 204, 291, 2679 |
| PflFI | GACNNNGTC | 1 cut(s) | 3072 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1572, 3420 |
| PinAI | ACCGGT | 2 cut(s) | 50, 3243 |
| PmaCI | CACGTG | 1 cut(s) | 2822 |
| PmlI | CACGTG | 1 cut(s) | 2822 |
| Ppu21I | YACGTR | 2 cut(s) | 2822, 3519 |
| PsiI | TTATAA | 2 cut(s) | 1718, 3652 |
| Psp124BI | GAGCTC | 1 cut(s) | 3132 |
| Psp6I | CCWGG | 4 cut(s) | 1552, 2337, 2374, 3632 |
| PspCI | CACGTG | 1 cut(s) | 2822 |
| PspGI | CCWGG | 4 cut(s) | 1552, 2337, 2374, 3632 |
| PspN4I | GGNNCC | 8 cut(s) | 357, 2104, 2245, 2317, 2730, 3201, 3575, 3626 |
| PspPI | GGNCC | 3 cut(s) | 946, 1459, 3574 |
| PsyI | GACNNNGTC | 1 cut(s) | 3072 |
| PvuII | CAGCTG | 1 cut(s) | 3216 |
| RsaI | GTAC | 6 cut(s) | 568, 1776, 1999, 2212, 2489, 2630 |
| RsaNI | GTAC | 6 cut(s) | 567, 1775, 1998, 2211, 2488, 2629 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1219, 1584, 3396 |
| SacI | GAGCTC | 1 cut(s) | 3132 |
| SalI | GTCGAC | 1 cut(s) | 2384 |
| SapI | GCTCTTC | 1 cut(s) | 3137 |
| Sau96I | GGNCC | 3 cut(s) | 946, 1459, 3574 |
| ScrFI | CCNGG | 4 cut(s) | 1554, 2339, 2376, 3634 |
| SduI | GDGCHC | 3 cut(s) | 2821, 3123, 3132 |
| Sfr274I | CTCGAG | 1 cut(s) | 499 |
| SfuI | TTCGAA | 1 cut(s) | 2996 |
| SinI | GGWCC | 2 cut(s) | 946, 3574 |
| SlaI | CTCGAG | 1 cut(s) | 499 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1219, 1584, 3396 |
| SmlI | CTYRAG | 4 cut(s) | 499, 1179, 2479, 3539 |
| SmoI | CTYRAG | 4 cut(s) | 499, 1179, 2479, 3539 |
| SpeI | ACTAGT | 1 cut(s) | 289 |
| SphI | GCATGC | 2 cut(s) | 1362, 1852 |
| SseBI | AGGCCT | 1 cut(s) | 1185 |
| SspI | AATATT | 2 cut(s) | 1401, 3355 |
| SspMI | CTAG | 6 cut(s) | 290, 836, 1073, 1434, 1505, 1937 |
| SstI | GAGCTC | 1 cut(s) | 3132 |
| StuI | AGGCCT | 1 cut(s) | 1185 |
| StyD4I | CCNGG | 4 cut(s) | 1552, 2337, 2374, 3632 |
| StyI | CCWWGG | 2 cut(s) | 179, 301 |
| TaaI | ACNGT | 5 cut(s) | 107, 1734, 2420, 3381, 3420 |
| TaiI | ACGT | 9 cut(s) | 369, 568, 1672, 1725, 2752, 2824, 3521, 3606, 3650 |
| TaqI | TCGA | 7 cut(s) | 500, 940, 1449, 2385, 2996, 3139, 3523 |
| TatI | WGTACW | 2 cut(s) | 1997, 2210 |
| TauI | GCSGC | 5 cut(s) | 993, 1863, 2734, 2780, 2910 |
| TscAI | CASTG | 6 cut(s) | 1050, 1247, 1326, 2500, 3403, 3425 |
| TseFI | GTSAC | 1 cut(s) | 2750 |
| TseI | GCWGC | 7 cut(s) | 458, 473, 716, 753, 1857, 2910, 3454 |
| Tsp45I | GTSAC | 1 cut(s) | 2750 |
| TspGWI | ACGGA | 3 cut(s) | 377, 1081, 3547 |
| TspRI | CASTG | 6 cut(s) | 1050, 1247, 1326, 2500, 3403, 3425 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3072 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1572, 3420 |
| VneI | GTGCAC | 1 cut(s) | 3119 |
| VpaK11BI | GGWCC | 2 cut(s) | 946, 3574 |
| XceI | RCATGY | 4 cut(s) | 625, 1362, 1481, 1852 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 577, 743 |
| XhoI | CTCGAG | 1 cut(s) | 499 |
| XmiI | GTMKAC | 3 cut(s) | 658, 970, 2385 |
| XmnI | GAANNNNTTC | 3 cut(s) | 204, 291, 2679 |
| XspI | CTAG | 6 cut(s) | 290, 836, 1073, 1434, 1505, 1937 |
| Zsp2I | ATGCAT | 3 cut(s) | 265, 1497, 2870 |