TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 105 - 273 | 7.5e-54 | TIR domain |
| TIR_2 | PF13676 | 107 - 202 | 1.7e-14 | TIR domain |
| NB-ARC | PF00931 | 284 - 457 | 8.1e-20 | NB-ARC domain |
| ATPase_2 | PF01637 | 288 - 400 | 1e-06 | ATPase domain predominantly from Archaea |
| WHD_ROQ1 | PF23282 | 524 - 598 | 9.9e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_Zer-1 | PF25013 | 715 - 785 | 4.1e-06 | Zer-1-like, Leucine-rich repeats |
| LRR_14 | PF23598 | 758 - 869 | 5.7e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 788 - 873 | 1e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1153 |
| AccI | GTMKAC | 1 cut(s) | 1819 |
| AccII | CGCG | 1 cut(s) | 349 |
| AccIII | TCCGGA | 1 cut(s) | 1375 |
| AciI | CCGC | 3 cut(s) | 90, 930, 2399 |
| AclI | AACGTT | 1 cut(s) | 1922 |
| AclWI | GGATC | 7 cut(s) | 261, 478, 596, 1459, 1575, 2363, 2460 |
| AcoI | YGGCCR | 2 cut(s) | 43, 2287 |
| AcsI | RAATTY | 7 cut(s) | 206, 1061, 1962, 2071, 2158, 2202, 2513 |
| AcuI | CTGAAG | 2 cut(s) | 316, 1151 |
| AfaI | GTAC | 1 cut(s) | 2553 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 69, 138, 272, 1153, 2026, 2285 |
| AflII | CTTAAG | 1 cut(s) | 2402 |
| AgeI | ACCGGT | 1 cut(s) | 2659 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2434 |
| AhlI | ACTAGT | 1 cut(s) | 2128 |
| AjiI | CACGTC | 1 cut(s) | 1901 |
| AjnI | CCWGG | 2 cut(s) | 453, 1002 |
| AleI | CACNNNNGTG | 3 cut(s) | 33, 2106, 2684 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2032, 2064 |
| Alw21I | GWGCWC | 3 cut(s) | 453, 1282, 1341 |
| Alw26I | GTCTC | 4 cut(s) | 1254, 1679, 2297, 2421 |
| Alw44I | GTGCAC | 1 cut(s) | 1278 |
| AlwI | GGATC | 7 cut(s) | 261, 478, 596, 1459, 1575, 2363, 2460 |
| Aor13HI | TCCGGA | 1 cut(s) | 1375 |
| AoxI | GGCC | 7 cut(s) | 43, 364, 628, 2111, 2191, 2287, 2506 |
| ApaI | GGGCCC | 1 cut(s) | 2115 |
| ApaLI | GTGCAC | 1 cut(s) | 1278 |
| ApeKI | GCWGC | 5 cut(s) | 701, 716, 2098, 2335, 2607 |
| ApoI | RAATTY | 7 cut(s) | 206, 1061, 1962, 2071, 2158, 2202, 2513 |
| AsiGI | ACCGGT | 1 cut(s) | 2659 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1584, 1779, 2646 |
| AspLEI | GCGC | 1 cut(s) | 351 |
| AspS9I | GGNCC | 7 cut(s) | 72, 628, 1180, 1229, 2029, 2111, 2112 |
| AsuHPI | GGTGA | 3 cut(s) | 163, 350, 650 |
| AvaII | GGWCC | 4 cut(s) | 72, 1180, 1229, 2029 |
| BaeGI | GKGCMC | 2 cut(s) | 1282, 2115 |
| BanII | GRGCYC | 3 cut(s) | 453, 1341, 2115 |
| BauI | CACGAG | 1 cut(s) | 855 |
| BbsI | GAAGAC | 3 cut(s) | 870, 1767, 1785 |
| Bbv12I | GWGCWC | 3 cut(s) | 453, 1282, 1341 |
| BbvI | GCAGC | 5 cut(s) | 713, 728, 2085, 2322, 2594 |
| BccI | CCATC | 8 cut(s) | 32, 103, 207, 740, 1991, 2183, 2477, 2563 |
| BceAI | ACGGC | 1 cut(s) | 2274 |
| BciT130I | CCWGG | 2 cut(s) | 455, 1004 |
| BciVI | GTATCC | 1 cut(s) | 337 |
| BclI | TGATCA | 1 cut(s) | 772 |
| BcoDI | GTCTC | 4 cut(s) | 1254, 1679, 2297, 2421 |
| BcuI | ACTAGT | 1 cut(s) | 2128 |
| BfaI | CTAG | 3 cut(s) | 935, 1757, 2129 |
| BfmI | CTRYAG | 2 cut(s) | 1052, 2336 |
| BfrI | CTTAAG | 1 cut(s) | 2402 |
| BfuI | GTATCC | 1 cut(s) | 337 |
| BglII | AGATCT | 2 cut(s) | 543, 1456 |
| BisI | GCNGC | 5 cut(s) | 702, 717, 2099, 2336, 2608 |
| BlpI | GCTNAGC | 2 cut(s) | 651, 656 |
| BlsI | GCNGC | 5 cut(s) | 703, 718, 2100, 2337, 2609 |
| Bme1390I | CCNGG | 2 cut(s) | 455, 1004 |
| Bme18I | GGWCC | 4 cut(s) | 72, 1180, 1229, 2029 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2434 |
| BmgBI | CACGTC | 1 cut(s) | 1901 |
| BmgT120I | GGNCC | 7 cut(s) | 72, 628, 1180, 1229, 2029, 2111, 2112 |
| BmiI | GGNNCC | 4 cut(s) | 61, 277, 2030, 2113 |
| BmrFI | CCNGG | 2 cut(s) | 455, 1004 |
| BmsI | GCATC | 8 cut(s) | 74, 518, 839, 1480, 1734, 1896, 2031, 2571 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1789 |
| BpiI | GAAGAC | 3 cut(s) | 870, 1767, 1785 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 250, 282 |
| BpmI | CTGGAG | 2 cut(s) | 1230, 2606 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 651, 656 |
| BpuEI | CTTGAG | 1 cut(s) | 1874 |
| BsaJI | CCNNGG | 1 cut(s) | 249 |
| BsaWI | WCCGGW | 3 cut(s) | 1375, 1865, 2659 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1029, 1059, 1986, 2016 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 69, 138, 272, 1153, 2026, 2285 |
| Bse118I | RCCGGY | 1 cut(s) | 2659 |
| Bse1I | ACTGG | 3 cut(s) | 2020, 2042, 2509 |
| BseAI | TCCGGA | 1 cut(s) | 1375 |
| BseBI | CCWGG | 2 cut(s) | 455, 1004 |
| BseDI | CCNNGG | 1 cut(s) | 249 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 69, 138, 272, 1153, 2026, 2285 |
| BseMII | CTCAG | 6 cut(s) | 78, 248, 317, 665, 2332, 2470 |
| BseNI | ACTGG | 3 cut(s) | 2020, 2042, 2509 |
| BseRI | GAGGAG | 5 cut(s) | 52, 215, 444, 891, 2643 |
| BseSI | GKGCMC | 2 cut(s) | 1282, 2115 |
| BseXI | GCAGC | 5 cut(s) | 713, 728, 2085, 2322, 2594 |
| BsgI | GTGCAG | 2 cut(s) | 2084, 2101 |
| Bsh1236I | CGCG | 1 cut(s) | 349 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2060 |
| BshFI | GGCC | 7 cut(s) | 45, 366, 630, 2113, 2193, 2289, 2508 |
| BshTI | ACCGGT | 1 cut(s) | 2659 |
| BsiEI | CGRYCG | 1 cut(s) | 2060 |
| BsiHKAI | GWGCWC | 3 cut(s) | 453, 1282, 1341 |
| BsiSI | CCGG | 5 cut(s) | 139, 1376, 1866, 1932, 2660 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 69, 138, 272, 1153, 2026, 2285 |
| BsmAI | GTCTC | 4 cut(s) | 1254, 1679, 2297, 2421 |
| BsmBI | CGTCTC | 1 cut(s) | 2297 |
| BsnI | GGCC | 7 cut(s) | 45, 366, 630, 2113, 2193, 2289, 2508 |
| Bsp120I | GGGCCC | 1 cut(s) | 2111 |
| Bsp1286I | GDGCHC | 4 cut(s) | 453, 1282, 1341, 2115 |
| Bsp13I | TCCGGA | 1 cut(s) | 1375 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 651, 656 |
| Bsp19I | CCATGG | 1 cut(s) | 249 |
| BspACI | CCGC | 3 cut(s) | 90, 930, 2399 |
| BspANI | GGCC | 7 cut(s) | 45, 366, 630, 2113, 2193, 2289, 2508 |
| BspCNI | CTCAG | 6 cut(s) | 77, 249, 318, 664, 2331, 2469 |
| BspEI | TCCGGA | 1 cut(s) | 1375 |
| BspFNI | CGCG | 1 cut(s) | 349 |
| BspLI | GGNNCC | 4 cut(s) | 61, 277, 2030, 2113 |
| BspMAI | CTGCAG | 1 cut(s) | 2340 |
| BspPI | GGATC | 7 cut(s) | 261, 478, 596, 1459, 1575, 2363, 2460 |
| BspTI | CTTAAG | 1 cut(s) | 2402 |
| BsrFI | RCCGGY | 1 cut(s) | 2659 |
| BsrI | ACTGG | 3 cut(s) | 2020, 2042, 2509 |
| BssAI | RCCGGY | 1 cut(s) | 2659 |
| BssECI | CCNNGG | 1 cut(s) | 249 |
| BssSI | CACGAG | 1 cut(s) | 855 |
| BssT1I | CCWWGG | 1 cut(s) | 249 |
| Bst2BI | CACGAG | 1 cut(s) | 855 |
| Bst2UI | CCWGG | 2 cut(s) | 455, 1004 |
| Bst4CI | ACNGT | 7 cut(s) | 879, 1126, 1194, 1721, 1824, 2186, 2235 |
| Bst6I | CTCTTC | 2 cut(s) | 286, 292 |
| BstAFI | CTTAAG | 1 cut(s) | 2402 |
| BstC8I | GCNNGC | 2 cut(s) | 58, 2399 |
| BstDSI | CCRYGG | 1 cut(s) | 249 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 67 |
| BstFNI | CGCG | 1 cut(s) | 349 |
| BstHHI | GCGC | 1 cut(s) | 351 |
| BstMAI | GTCTC | 4 cut(s) | 1254, 1679, 2297, 2421 |
| BstMCI | CGRYCG | 1 cut(s) | 2060 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 84, 506, 2484 |
| BstNI | CCWGG | 2 cut(s) | 455, 1004 |
| BstNSI | RCATGY | 2 cut(s) | 96, 1602 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1789 |
| BstSCI | CCNGG | 2 cut(s) | 453, 1002 |
| BstSFI | CTRYAG | 2 cut(s) | 1052, 2336 |
| BstSLI | GKGCMC | 2 cut(s) | 1282, 2115 |
| BstUI | CGCG | 1 cut(s) | 349 |
| BstV1I | GCAGC | 5 cut(s) | 713, 728, 2085, 2322, 2594 |
| BstV2I | GAAGAC | 3 cut(s) | 870, 1767, 1785 |
| BstX2I | RGATCY | 5 cut(s) | 253, 543, 601, 1456, 2452 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 35 |
| BstYI | RGATCY | 5 cut(s) | 253, 543, 601, 1456, 2452 |
| BsuI | GTATCC | 1 cut(s) | 337 |
| BsuRI | GGCC | 7 cut(s) | 45, 366, 630, 2113, 2193, 2289, 2508 |
| BtgI | CCRYGG | 1 cut(s) | 249 |
| BtrI | CACGTC | 1 cut(s) | 1901 |
| BtsIMutI | CAGTG | 4 cut(s) | 72, 1122, 1726, 2502 |
| Cac8I | GCNNGC | 2 cut(s) | 58, 2399 |
| CfoI | GCGC | 1 cut(s) | 351 |
| Cfr10I | RCCGGY | 1 cut(s) | 2659 |
| Cfr13I | GGNCC | 7 cut(s) | 72, 628, 1180, 1229, 2029, 2111, 2112 |
| CseI | GACGC | 1 cut(s) | 905 |
| Csp6I | GTAC | 1 cut(s) | 2552 |
| CspAI | ACCGGT | 1 cut(s) | 2659 |
| CviQI | GTAC | 1 cut(s) | 2552 |
| DraI | TTTAAA | 2 cut(s) | 988, 1609 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2434 |
| EaeI | YGGCCR | 2 cut(s) | 43, 2287 |
| Eam1104I | CTCTTC | 2 cut(s) | 286, 292 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2434 |
| EarI | CTCTTC | 2 cut(s) | 286, 292 |
| EciI | GGCGGA | 1 cut(s) | 945 |
| Ecl136II | GAGCTC | 2 cut(s) | 451, 1339 |
| Eco130I | CCWWGG | 1 cut(s) | 249 |
| Eco24I | GRGCYC | 3 cut(s) | 453, 1341, 2115 |
| Eco47I | GGWCC | 4 cut(s) | 72, 1180, 1229, 2029 |
| Eco53kI | GAGCTC | 2 cut(s) | 451, 1339 |
| Eco57I | CTGAAG | 2 cut(s) | 316, 1151 |
| EcoICRI | GAGCTC | 2 cut(s) | 451, 1339 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 67 |
| EcoO109I | RGGNCCY | 3 cut(s) | 72, 2029, 2112 |
| EcoRI | GAATTC | 1 cut(s) | 2202 |
| EcoRII | CCWGG | 2 cut(s) | 453, 1002 |
| EcoT14I | CCWWGG | 1 cut(s) | 249 |
| EcoT22I | ATGCAT | 3 cut(s) | 1495, 1749, 2046 |
| EcoT38I | GRGCYC | 3 cut(s) | 453, 1341, 2115 |
| ErhI | CCWWGG | 1 cut(s) | 249 |
| Esp3I | CGTCTC | 1 cut(s) | 2297 |
| FauI | CCCGC | 1 cut(s) | 2406 |
| FauNDI | CATATG | 1 cut(s) | 1033 |
| FbaI | TGATCA | 1 cut(s) | 772 |
| FblI | GTMKAC | 1 cut(s) | 1819 |
| Fnu4HI | GCNGC | 5 cut(s) | 702, 717, 2099, 2336, 2608 |
| FriOI | GRGCYC | 3 cut(s) | 453, 1341, 2115 |
| Fsp4HI | GCNGC | 5 cut(s) | 702, 717, 2099, 2336, 2608 |
| FspBI | CTAG | 3 cut(s) | 935, 1757, 2129 |
| GlaI | GCGC | 1 cut(s) | 350 |
| GluI | GCNGC | 5 cut(s) | 702, 717, 2099, 2336, 2608 |
| GsuI | CTGGAG | 2 cut(s) | 1230, 2606 |
| HaeIII | GGCC | 7 cut(s) | 45, 366, 630, 2113, 2193, 2289, 2508 |
| HapII | CCGG | 5 cut(s) | 139, 1376, 1866, 1932, 2660 |
| HgaI | GACGC | 1 cut(s) | 905 |
| HhaI | GCGC | 1 cut(s) | 351 |
| Hin6I | GCGC | 1 cut(s) | 349 |
| HinP1I | GCGC | 1 cut(s) | 349 |
| HincII | GTYRAC | 1 cut(s) | 388 |
| HindII | GTYRAC | 1 cut(s) | 388 |
| HindIII | AAGCTT | 5 cut(s) | 117, 1329, 1936, 2300, 2615 |
| HpaI | GTTAAC | 1 cut(s) | 388 |
| HpaII | CCGG | 5 cut(s) | 139, 1376, 1866, 1932, 2660 |
| HphI | GGTGA | 3 cut(s) | 163, 350, 650 |
| Hpy166II | GTNNAC | 8 cut(s) | 309, 388, 580, 964, 1180, 1280, 1820, 2134 |
| Hpy8I | GTNNAC | 8 cut(s) | 309, 388, 580, 964, 1180, 1280, 1820, 2134 |
| Hpy99I | CGWCG | 2 cut(s) | 610, 2086 |
| HpyAV | CCTTC | 9 cut(s) | 415, 461, 619, 676, 691, 1109, 1366, 1763, 2289 |
| HpyCH4III | ACNGT | 7 cut(s) | 879, 1126, 1194, 1721, 1824, 2186, 2235 |
| HpyCH4IV | ACGT | 5 cut(s) | 1411, 1848, 1900, 1922, 2581 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 84, 506, 2484 |
| HpySE526I | ACGT | 5 cut(s) | 1411, 1848, 1900, 1922, 2581 |
| HspAI | GCGC | 1 cut(s) | 349 |
| Kpn2I | TCCGGA | 1 cut(s) | 1375 |
| Ksp22I | TGATCA | 1 cut(s) | 772 |
| KspAI | GTTAAC | 1 cut(s) | 388 |
| LmnI | GCTCC | 7 cut(s) | 65, 92, 275, 448, 456, 904, 2242 |
| Lsp1109I | GCAGC | 5 cut(s) | 713, 728, 2085, 2322, 2594 |
| LweI | GCATC | 8 cut(s) | 74, 518, 839, 1480, 1734, 1896, 2031, 2571 |
| MaeI | CTAG | 3 cut(s) | 935, 1757, 2129 |
| MaeII | ACGT | 5 cut(s) | 1411, 1848, 1900, 1922, 2581 |
| MaeIII | GTNAC | 5 cut(s) | 151, 1099, 1652, 1721, 2620 |
| MfeI | CAATTG | 2 cut(s) | 645, 1184 |
| MflI | RGATCY | 5 cut(s) | 253, 543, 601, 1456, 2452 |
| MhlI | GDGCHC | 4 cut(s) | 453, 1282, 1341, 2115 |
| MlyI | GAGTC | 2 cut(s) | 1799, 2116 |
| MmeI | TCCRAC | 6 cut(s) | 588, 823, 2105, 2160, 2473, 2654 |
| Mph1103I | ATGCAT | 3 cut(s) | 1495, 1749, 2046 |
| MroI | TCCGGA | 1 cut(s) | 1375 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1584, 1779, 2646 |
| MslI | CAYNNNNRTG | 3 cut(s) | 33, 2106, 2684 |
| MspCI | CTTAAG | 1 cut(s) | 2402 |
| MspI | CCGG | 5 cut(s) | 139, 1376, 1866, 1932, 2660 |
| MspR9I | CCNGG | 2 cut(s) | 455, 1004 |
| MssI | GTTTAAAC | 1 cut(s) | 988 |
| MunI | CAATTG | 2 cut(s) | 645, 1184 |
| MvaI | CCWGG | 2 cut(s) | 455, 1004 |
| MvnI | CGCG | 1 cut(s) | 349 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 84, 506, 2484 |
| NcoI | CCATGG | 1 cut(s) | 249 |
| NdeI | CATATG | 1 cut(s) | 1033 |
| NlaIV | GGNNCC | 4 cut(s) | 61, 277, 2030, 2113 |
| NmuCI | GTSAC | 4 cut(s) | 151, 1099, 1652, 1721 |
| NsiI | ATGCAT | 3 cut(s) | 1495, 1749, 2046 |
| NspI | RCATGY | 2 cut(s) | 96, 1602 |
| OliI | CACNNNNGTG | 3 cut(s) | 33, 2106, 2684 |
| PacI | TTAATTAA | 1 cut(s) | 1704 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2066 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1584, 1779, 2646 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1153 |
| PfoI | TCCNGGA | 1 cut(s) | 453 |
| PinAI | ACCGGT | 1 cut(s) | 2659 |
| PkrI | GCNGC | 5 cut(s) | 703, 718, 2100, 2337, 2609 |
| Ple19I | CGATCG | 1 cut(s) | 2060 |
| PleI | GAGTC | 2 cut(s) | 1798, 2116 |
| PmeI | GTTTAAAC | 1 cut(s) | 988 |
| PpsI | GAGTC | 2 cut(s) | 1798, 2116 |
| PpuMI | RGGWCCY | 2 cut(s) | 72, 2029 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1789 |
| Psp124BI | GAGCTC | 2 cut(s) | 453, 1341 |
| Psp1406I | AACGTT | 1 cut(s) | 1922 |
| Psp5II | RGGWCCY | 2 cut(s) | 72, 2029 |
| Psp6I | CCWGG | 2 cut(s) | 453, 1002 |
| PspGI | CCWGG | 2 cut(s) | 453, 1002 |
| PspN4I | GGNNCC | 4 cut(s) | 61, 277, 2030, 2113 |
| PspOMI | GGGCCC | 1 cut(s) | 2111 |
| PspPI | GGNCC | 7 cut(s) | 72, 628, 1180, 1229, 2029, 2111, 2112 |
| PspPPI | RGGWCCY | 2 cut(s) | 72, 2029 |
| PstI | CTGCAG | 1 cut(s) | 2340 |
| PsuI | RGATCY | 5 cut(s) | 253, 543, 601, 1456, 2452 |
| PvuI | CGATCG | 1 cut(s) | 2060 |
| RsaI | GTAC | 1 cut(s) | 2553 |
| RsaNI | GTAC | 1 cut(s) | 2552 |
| RseI | CAYNNNNRTG | 3 cut(s) | 33, 2106, 2684 |
| SacI | GAGCTC | 2 cut(s) | 453, 1341 |
| SatI | GCNGC | 5 cut(s) | 702, 717, 2099, 2336, 2608 |
| Sau96I | GGNCC | 7 cut(s) | 72, 628, 1180, 1229, 2029, 2111, 2112 |
| SchI | GAGTC | 2 cut(s) | 1799, 2116 |
| ScrFI | CCNGG | 2 cut(s) | 455, 1004 |
| SduI | GDGCHC | 4 cut(s) | 453, 1282, 1341, 2115 |
| SfaNI | GCATC | 8 cut(s) | 74, 518, 839, 1480, 1734, 1896, 2031, 2571 |
| SfcI | CTRYAG | 2 cut(s) | 1052, 2336 |
| SinI | GGWCC | 4 cut(s) | 72, 1180, 1229, 2029 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 33, 2106, 2684 |
| SmlI | CTYRAG | 2 cut(s) | 1853, 2402 |
| SmoI | CTYRAG | 2 cut(s) | 1853, 2402 |
| SpeI | ACTAGT | 1 cut(s) | 2128 |
| SsiI | CCGC | 3 cut(s) | 90, 930, 2399 |
| SspI | AATATT | 1 cut(s) | 588 |
| SspMI | CTAG | 3 cut(s) | 935, 1757, 2129 |
| SstI | GAGCTC | 2 cut(s) | 453, 1341 |
| StyD4I | CCNGG | 2 cut(s) | 453, 1002 |
| StyI | CCWWGG | 1 cut(s) | 249 |
| TaaI | ACNGT | 7 cut(s) | 879, 1126, 1194, 1721, 1824, 2186, 2235 |
| TaiI | ACGT | 5 cut(s) | 1414, 1851, 1903, 1925, 2584 |
| TaqI | TCGA | 7 cut(s) | 9, 82, 1783, 2034, 2295, 2421, 2558 |
| TaqII | GACCGA | 1 cut(s) | 1118 |
| TscAI | CASTG | 4 cut(s) | 72, 1129, 1726, 2509 |
| TseFI | GTSAC | 4 cut(s) | 151, 1099, 1652, 1721 |
| TseI | GCWGC | 5 cut(s) | 701, 716, 2098, 2335, 2607 |
| Tsp45I | GTSAC | 4 cut(s) | 151, 1099, 1652, 1721 |
| TspGWI | ACGGA | 3 cut(s) | 594, 1419, 1886 |
| TspRI | CASTG | 4 cut(s) | 72, 1129, 1726, 2509 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1153 |
| Vha464I | CTTAAG | 1 cut(s) | 2402 |
| VneI | GTGCAC | 1 cut(s) | 1278 |
| VpaK11BI | GGWCC | 4 cut(s) | 72, 1180, 1229, 2029 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 67 |
| XapI | RAATTY | 7 cut(s) | 206, 1061, 1962, 2071, 2158, 2202, 2513 |
| XbaI | TCTAGA | 1 cut(s) | 1756 |
| XceI | RCATGY | 2 cut(s) | 96, 1602 |
| XmiI | GTMKAC | 1 cut(s) | 1819 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1584, 1779, 2646 |
| XspI | CTAG | 3 cut(s) | 935, 1757, 2129 |
| Zsp2I | ATGCAT | 3 cut(s) | 1495, 1749, 2046 |