TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1522 |
| AccII | CGCG | 2 cut(s) | 106, 1548 |
| AclWI | GGATC | 7 cut(s) | 12, 235, 353, 1174, 1290, 1775, 1875 |
| AcoI | YGGCCR | 2 cut(s) | 121, 1708 |
| AcsI | RAATTY | 2 cut(s) | 1623, 1873 |
| AcuI | CTGAAG | 2 cut(s) | 73, 866 |
| AfaI | GTAC | 2 cut(s) | 131, 1601 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 23, 1385, 1504, 1706 |
| AflII | CTTAAG | 1 cut(s) | 1817 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1849 |
| AjnI | CCWGG | 4 cut(s) | 210, 387, 759, 1863 |
| Alw21I | GWGCWC | 2 cut(s) | 210, 1056 |
| Alw26I | GTCTC | 4 cut(s) | 1394, 1836, 1941, 2003 |
| AlwI | GGATC | 7 cut(s) | 12, 235, 353, 1174, 1290, 1775, 1875 |
| AoxI | GGCC | 6 cut(s) | 121, 385, 1020, 1410, 1708, 1921 |
| ApeKI | GCWGC | 4 cut(s) | 325, 458, 473, 1747 |
| ApoI | RAATTY | 2 cut(s) | 1623, 1873 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1299, 1482 |
| AspLEI | GCGC | 3 cut(s) | 106, 108, 1518 |
| AspS9I | GGNCC | 3 cut(s) | 385, 944, 1020 |
| AsuHPI | GGTGA | 3 cut(s) | 107, 401, 407 |
| AvaII | GGWCC | 1 cut(s) | 944 |
| AxyI | CCTNAGG | 1 cut(s) | 989 |
| BalI | TGGCCA | 1 cut(s) | 123 |
| BanII | GRGCYC | 3 cut(s) | 210, 997, 1056 |
| BauI | CACGAG | 1 cut(s) | 612 |
| BbsI | GAAGAC | 3 cut(s) | 627, 657, 1470 |
| Bbv12I | GWGCWC | 2 cut(s) | 210, 1056 |
| BbvI | GCAGC | 4 cut(s) | 337, 470, 485, 1734 |
| BccI | CCATC | 3 cut(s) | 370, 497, 1604 |
| BceAI | ACGGC | 1 cut(s) | 1794 |
| BciT130I | CCWGG | 4 cut(s) | 212, 389, 761, 1865 |
| BclI | TGATCA | 1 cut(s) | 1036 |
| BcoDI | GTCTC | 4 cut(s) | 1394, 1836, 1941, 2003 |
| BfaI | CTAG | 2 cut(s) | 1940, 1955 |
| BfmI | CTRYAG | 1 cut(s) | 1748 |
| BfrI | CTTAAG | 1 cut(s) | 1817 |
| BglII | AGATCT | 2 cut(s) | 300, 1171 |
| BisI | GCNGC | 4 cut(s) | 326, 459, 474, 1748 |
| BlsI | GCNGC | 4 cut(s) | 327, 460, 475, 1749 |
| Bme1390I | CCNGG | 4 cut(s) | 212, 389, 761, 1865 |
| Bme18I | GGWCC | 1 cut(s) | 944 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1849 |
| BmgT120I | GGNCC | 3 cut(s) | 385, 944, 1020 |
| BmiI | GGNNCC | 2 cut(s) | 28, 1021 |
| BmrFI | CCNGG | 4 cut(s) | 212, 389, 761, 1865 |
| BmsI | GCATC | 6 cut(s) | 91, 275, 388, 1195, 1437, 1893 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1492 |
| BpiI | GAAGAC | 3 cut(s) | 627, 657, 1470 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 33 |
| BpmI | CTGGAG | 1 cut(s) | 945 |
| Bpu10I | CCTNAGC | 1 cut(s) | 413 |
| BpuEI | CTTGAG | 1 cut(s) | 1577 |
| BsaBI | GATNNNNATC | 1 cut(s) | 174 |
| BsaI | GGTCTC | 1 cut(s) | 1394 |
| BsaJI | CCNNGG | 1 cut(s) | 1023 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 23, 1385, 1504, 1706 |
| Bse118I | RCCGGY | 1 cut(s) | 1710 |
| Bse1I | ACTGG | 2 cut(s) | 124, 1924 |
| Bse21I | CCTNAGG | 1 cut(s) | 989 |
| Bse8I | GATNNNNATC | 1 cut(s) | 174 |
| BseBI | CCWGG | 4 cut(s) | 212, 389, 761, 1865 |
| BseDI | CCNNGG | 1 cut(s) | 1023 |
| BseGI | GGATG | 7 cut(s) | 106, 292, 1099, 1198, 1293, 1452, 1696 |
| BseJI | GATNNNNATC | 1 cut(s) | 174 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 23, 1385, 1504, 1706 |
| BseMII | CTCAG | 4 cut(s) | 74, 513, 1107, 1917 |
| BseNI | ACTGG | 2 cut(s) | 124, 1924 |
| BsePI | GCGCGC | 1 cut(s) | 104 |
| BseRI | GAGGAG | 1 cut(s) | 201 |
| BseXI | GCAGC | 4 cut(s) | 337, 470, 485, 1734 |
| Bsh1236I | CGCG | 2 cut(s) | 106, 1548 |
| BshFI | GGCC | 6 cut(s) | 123, 387, 1022, 1412, 1710, 1923 |
| BsiHKAI | GWGCWC | 2 cut(s) | 210, 1056 |
| BsiSI | CCGG | 1 cut(s) | 1711 |
| BslFI | GGGAC | 1 cut(s) | 1480 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 23, 1385, 1504, 1706 |
| BsmAI | GTCTC | 4 cut(s) | 1394, 1836, 1941, 2003 |
| BsmFI | GGGAC | 1 cut(s) | 1480 |
| BsmI | GAATGC | 2 cut(s) | 1070, 2006 |
| BsnI | GGCC | 6 cut(s) | 123, 387, 1022, 1412, 1710, 1923 |
| Bso31I | GGTCTC | 1 cut(s) | 1394 |
| Bsp1286I | GDGCHC | 3 cut(s) | 210, 997, 1056 |
| Bsp1407I | TGTACA | 1 cut(s) | 129 |
| Bsp68I | TCGCGA | 1 cut(s) | 1548 |
| BspANI | GGCC | 6 cut(s) | 123, 387, 1022, 1412, 1710, 1923 |
| BspCNI | CTCAG | 4 cut(s) | 75, 512, 1108, 1916 |
| BspFNI | CGCG | 2 cut(s) | 106, 1548 |
| BspHI | TCATGA | 2 cut(s) | 2034, 2051 |
| BspLI | GGNNCC | 2 cut(s) | 28, 1021 |
| BspMAI | CTGCAG | 1 cut(s) | 1752 |
| BspPI | GGATC | 7 cut(s) | 12, 235, 353, 1174, 1290, 1775, 1875 |
| BspQI | GCTCTTC | 1 cut(s) | 1061 |
| BspTI | CTTAAG | 1 cut(s) | 1817 |
| BspTNI | GGTCTC | 1 cut(s) | 1394 |
| BsrFI | RCCGGY | 1 cut(s) | 1710 |
| BsrGI | TGTACA | 1 cut(s) | 129 |
| BsrI | ACTGG | 2 cut(s) | 124, 1924 |
| BssAI | RCCGGY | 1 cut(s) | 1710 |
| BssECI | CCNNGG | 1 cut(s) | 1023 |
| BssHII | GCGCGC | 1 cut(s) | 104 |
| BssSI | CACGAG | 1 cut(s) | 612 |
| BssT1I | CCWWGG | 1 cut(s) | 1023 |
| Bst2BI | CACGAG | 1 cut(s) | 612 |
| Bst2UI | CCWGG | 4 cut(s) | 212, 389, 761, 1865 |
| Bst4CI | ACNGT | 2 cut(s) | 1527, 1736 |
| Bst6I | CTCTTC | 4 cut(s) | 37, 43, 49, 1061 |
| BstAFI | CTTAAG | 1 cut(s) | 1817 |
| BstAUI | TGTACA | 1 cut(s) | 129 |
| BstC8I | GCNNGC | 2 cut(s) | 106, 1712 |
| BstF5I | GGATG | 7 cut(s) | 106, 292, 1099, 1198, 1293, 1452, 1696 |
| BstFNI | CGCG | 2 cut(s) | 106, 1548 |
| BstHHI | GCGC | 3 cut(s) | 106, 108, 1518 |
| BstMAI | GTCTC | 4 cut(s) | 1394, 1836, 1941, 2003 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 263 |
| BstNI | CCWGG | 4 cut(s) | 212, 389, 761, 1865 |
| BstNSI | RCATGY | 1 cut(s) | 1317 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1492 |
| BstSCI | CCNGG | 4 cut(s) | 210, 387, 759, 1863 |
| BstSFI | CTRYAG | 1 cut(s) | 1748 |
| BstUI | CGCG | 2 cut(s) | 106, 1548 |
| BstV1I | GCAGC | 4 cut(s) | 337, 470, 485, 1734 |
| BstV2I | GAAGAC | 3 cut(s) | 627, 657, 1470 |
| BstX2I | RGATCY | 5 cut(s) | 4, 300, 358, 1171, 1867 |
| BstYI | RGATCY | 5 cut(s) | 4, 300, 358, 1171, 1867 |
| Bsu36I | CCTNAGG | 1 cut(s) | 989 |
| BsuRI | GGCC | 6 cut(s) | 123, 387, 1022, 1412, 1710, 1923 |
| BtsCI | GGATG | 7 cut(s) | 106, 292, 1099, 1198, 1293, 1452, 1696 |
| BtsIMutI | CAGTG | 2 cut(s) | 117, 1917 |
| BtuMI | TCGCGA | 1 cut(s) | 1548 |
| Cac8I | GCNNGC | 2 cut(s) | 106, 1712 |
| CciI | TCATGA | 2 cut(s) | 2034, 2051 |
| CfoI | GCGC | 3 cut(s) | 106, 108, 1518 |
| Cfr10I | RCCGGY | 1 cut(s) | 1710 |
| Cfr13I | GGNCC | 3 cut(s) | 385, 944, 1020 |
| Csp6I | GTAC | 2 cut(s) | 130, 1600 |
| CviQI | GTAC | 2 cut(s) | 130, 1600 |
| DraI | TTTAAA | 1 cut(s) | 1324 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1849 |
| EaeI | YGGCCR | 2 cut(s) | 121, 1708 |
| Eam1104I | CTCTTC | 4 cut(s) | 37, 43, 49, 1061 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1849 |
| EarI | CTCTTC | 4 cut(s) | 37, 43, 49, 1061 |
| Ecl136II | GAGCTC | 2 cut(s) | 208, 1054 |
| Eco130I | CCWWGG | 1 cut(s) | 1023 |
| Eco147I | AGGCCT | 1 cut(s) | 1412 |
| Eco24I | GRGCYC | 3 cut(s) | 210, 997, 1056 |
| Eco31I | GGTCTC | 1 cut(s) | 1394 |
| Eco32I | GATATC | 1 cut(s) | 549 |
| Eco47I | GGWCC | 1 cut(s) | 944 |
| Eco53kI | GAGCTC | 2 cut(s) | 208, 1054 |
| Eco57I | CTGAAG | 2 cut(s) | 73, 866 |
| Eco81I | CCTNAGG | 1 cut(s) | 989 |
| EcoICRI | GAGCTC | 2 cut(s) | 208, 1054 |
| EcoRI | GAATTC | 1 cut(s) | 1623 |
| EcoRII | CCWGG | 4 cut(s) | 210, 387, 759, 1863 |
| EcoRV | GATATC | 1 cut(s) | 549 |
| EcoT14I | CCWWGG | 1 cut(s) | 1023 |
| EcoT22I | ATGCAT | 3 cut(s) | 1072, 1210, 1452 |
| EcoT38I | GRGCYC | 3 cut(s) | 210, 997, 1056 |
| ErhI | CCWWGG | 1 cut(s) | 1023 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 266, 298, 612, 644, 1287, 1319 |
| FaqI | GGGAC | 1 cut(s) | 1480 |
| FbaI | TGATCA | 1 cut(s) | 1036 |
| FblI | GTMKAC | 1 cut(s) | 1522 |
| Fnu4HI | GCNGC | 4 cut(s) | 326, 459, 474, 1748 |
| FokI | GGATG | 7 cut(s) | 113, 299, 1106, 1205, 1300, 1459, 1683 |
| FriOI | GRGCYC | 3 cut(s) | 210, 997, 1056 |
| Fsp4HI | GCNGC | 4 cut(s) | 326, 459, 474, 1748 |
| FspBI | CTAG | 2 cut(s) | 1940, 1955 |
| GlaI | GCGC | 3 cut(s) | 105, 107, 1517 |
| GluI | GCNGC | 4 cut(s) | 326, 459, 474, 1748 |
| GsuI | CTGGAG | 1 cut(s) | 945 |
| HaeIII | GGCC | 6 cut(s) | 123, 387, 1022, 1412, 1710, 1923 |
| HapII | CCGG | 1 cut(s) | 1711 |
| HhaI | GCGC | 3 cut(s) | 106, 108, 1518 |
| Hin6I | GCGC | 3 cut(s) | 104, 106, 1516 |
| HinP1I | GCGC | 3 cut(s) | 104, 106, 1516 |
| HincII | GTYRAC | 2 cut(s) | 145, 1814 |
| HindII | GTYRAC | 2 cut(s) | 145, 1814 |
| HindIII | AAGCTT | 2 cut(s) | 1044, 1648 |
| HpaI | GTTAAC | 1 cut(s) | 145 |
| HpaII | CCGG | 1 cut(s) | 1711 |
| HphI | GGTGA | 3 cut(s) | 107, 401, 407 |
| Hpy166II | GTNNAC | 6 cut(s) | 66, 145, 337, 721, 1523, 1814 |
| Hpy8I | GTNNAC | 6 cut(s) | 66, 145, 337, 721, 1523, 1814 |
| HpyAV | CCTTC | 6 cut(s) | 172, 218, 433, 448, 1710, 2021 |
| HpyCH4III | ACNGT | 2 cut(s) | 1527, 1736 |
| HpyCH4IV | ACGT | 2 cut(s) | 1002, 1087 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 263 |
| HpySE526I | ACGT | 2 cut(s) | 1002, 1087 |
| HspAI | GCGC | 3 cut(s) | 104, 106, 1516 |
| KroI | GCCGGC | 1 cut(s) | 1710 |
| KroNI | GCCGGC | 1 cut(s) | 1712 |
| Ksp22I | TGATCA | 1 cut(s) | 1036 |
| KspAI | GTTAAC | 1 cut(s) | 145 |
| LguI | GCTCTTC | 1 cut(s) | 1061 |
| LmnI | GCTCC | 4 cut(s) | 26, 205, 213, 1663 |
| Lsp1109I | GCAGC | 4 cut(s) | 337, 470, 485, 1734 |
| LweI | GCATC | 6 cut(s) | 91, 275, 388, 1195, 1437, 1893 |
| MaeI | CTAG | 2 cut(s) | 1940, 1955 |
| MaeII | ACGT | 2 cut(s) | 1002, 1087 |
| MaeIII | GTNAC | 7 cut(s) | 814, 1265, 1328, 1367, 1717, 1893, 1963 |
| MfeI | CAATTG | 1 cut(s) | 402 |
| MflI | RGATCY | 5 cut(s) | 4, 300, 358, 1171, 1867 |
| MhlI | GDGCHC | 3 cut(s) | 210, 997, 1056 |
| MlsI | TGGCCA | 1 cut(s) | 123 |
| MluNI | TGGCCA | 1 cut(s) | 123 |
| MlyI | GAGTC | 2 cut(s) | 1502, 1873 |
| MmeI | TCCRAC | 4 cut(s) | 431, 580, 882, 1888 |
| Mox20I | TGGCCA | 1 cut(s) | 123 |
| Mph1103I | ATGCAT | 3 cut(s) | 1072, 1210, 1452 |
| MroNI | GCCGGC | 1 cut(s) | 1710 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1299, 1482 |
| MscI | TGGCCA | 1 cut(s) | 123 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2011, 2039 |
| Msp20I | TGGCCA | 1 cut(s) | 123 |
| MspCI | CTTAAG | 1 cut(s) | 1817 |
| MspI | CCGG | 1 cut(s) | 1711 |
| MspR9I | CCNGG | 4 cut(s) | 212, 389, 761, 1865 |
| MunI | CAATTG | 1 cut(s) | 402 |
| Mva1269I | GAATGC | 2 cut(s) | 1070, 2006 |
| MvaI | CCWGG | 4 cut(s) | 212, 389, 761, 1865 |
| MvnI | CGCG | 2 cut(s) | 106, 1548 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 263 |
| NaeI | GCCGGC | 1 cut(s) | 1712 |
| NgoMIV | GCCGGC | 1 cut(s) | 1710 |
| NlaIV | GGNNCC | 2 cut(s) | 28, 1021 |
| NmuCI | GTSAC | 4 cut(s) | 814, 1367, 1717, 1963 |
| NruI | TCGCGA | 1 cut(s) | 1548 |
| NsiI | ATGCAT | 3 cut(s) | 1072, 1210, 1452 |
| NspI | RCATGY | 1 cut(s) | 1317 |
| PagI | TCATGA | 2 cut(s) | 2034, 2051 |
| PauI | GCGCGC | 1 cut(s) | 104 |
| PceI | AGGCCT | 1 cut(s) | 1412 |
| PciSI | GCTCTTC | 1 cut(s) | 1061 |
| PctI | GAATGC | 2 cut(s) | 1070, 2006 |
| PdiI | GCCGGC | 1 cut(s) | 1712 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1299, 1482 |
| PfoI | TCCNGGA | 1 cut(s) | 210 |
| PkrI | GCNGC | 4 cut(s) | 327, 460, 475, 1749 |
| PleI | GAGTC | 2 cut(s) | 1501, 1873 |
| PpsI | GAGTC | 2 cut(s) | 1501, 1873 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1492 |
| Psp124BI | GAGCTC | 2 cut(s) | 210, 1056 |
| Psp6I | CCWGG | 4 cut(s) | 210, 387, 759, 1863 |
| PspGI | CCWGG | 4 cut(s) | 210, 387, 759, 1863 |
| PspN4I | GGNNCC | 2 cut(s) | 28, 1021 |
| PspPI | GGNCC | 3 cut(s) | 385, 944, 1020 |
| PstI | CTGCAG | 1 cut(s) | 1752 |
| PsuI | RGATCY | 5 cut(s) | 4, 300, 358, 1171, 1867 |
| PteI | GCGCGC | 1 cut(s) | 104 |
| RruI | TCGCGA | 1 cut(s) | 1548 |
| RsaI | GTAC | 2 cut(s) | 131, 1601 |
| RsaNI | GTAC | 2 cut(s) | 130, 1600 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2011, 2039 |
| SacI | GAGCTC | 2 cut(s) | 210, 1056 |
| SapI | GCTCTTC | 1 cut(s) | 1061 |
| SatI | GCNGC | 4 cut(s) | 326, 459, 474, 1748 |
| Sau96I | GGNCC | 3 cut(s) | 385, 944, 1020 |
| SchI | GAGTC | 2 cut(s) | 1502, 1873 |
| ScrFI | CCNGG | 4 cut(s) | 212, 389, 761, 1865 |
| SduI | GDGCHC | 3 cut(s) | 210, 997, 1056 |
| SfaNI | GCATC | 6 cut(s) | 91, 275, 388, 1195, 1437, 1893 |
| SfcI | CTRYAG | 1 cut(s) | 1748 |
| SinI | GGWCC | 1 cut(s) | 944 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2011, 2039 |
| SmlI | CTYRAG | 2 cut(s) | 1556, 1817 |
| SmoI | CTYRAG | 2 cut(s) | 1556, 1817 |
| SseBI | AGGCCT | 1 cut(s) | 1412 |
| SspI | AATATT | 1 cut(s) | 1951 |
| SspMI | CTAG | 2 cut(s) | 1940, 1955 |
| SstI | GAGCTC | 2 cut(s) | 210, 1056 |
| StuI | AGGCCT | 1 cut(s) | 1412 |
| StyD4I | CCNGG | 4 cut(s) | 210, 387, 759, 1863 |
| StyI | CCWWGG | 1 cut(s) | 1023 |
| TaaI | ACNGT | 2 cut(s) | 1527, 1736 |
| TaiI | ACGT | 2 cut(s) | 1005, 1090 |
| TaqI | TCGA | 1 cut(s) | 1486 |
| TatI | WGTACW | 1 cut(s) | 129 |
| TscAI | CASTG | 2 cut(s) | 124, 1924 |
| TseFI | GTSAC | 4 cut(s) | 814, 1367, 1717, 1963 |
| TseI | GCWGC | 4 cut(s) | 325, 458, 473, 1747 |
| Tsp45I | GTSAC | 4 cut(s) | 814, 1367, 1717, 1963 |
| TspGWI | ACGGA | 2 cut(s) | 1115, 1134 |
| TspRI | CASTG | 2 cut(s) | 124, 1924 |
| Vha464I | CTTAAG | 1 cut(s) | 1817 |
| VpaK11BI | GGWCC | 1 cut(s) | 944 |
| XapI | RAATTY | 2 cut(s) | 1623, 1873 |
| XbaI | TCTAGA | 1 cut(s) | 1954 |
| XceI | RCATGY | 1 cut(s) | 1317 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1967 |
| XmiI | GTMKAC | 1 cut(s) | 1522 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1299, 1482 |
| XspI | CTAG | 2 cut(s) | 1940, 1955 |
| Zsp2I | ATGCAT | 3 cut(s) | 1072, 1210, 1452 |