TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 17 - 179 | 2.4e-55 | TIR domain |
| TIR_2 | PF13676 | 19 - 114 | 4.9e-16 | TIR domain |
| NB-ARC | PF00931 | 202 - 366 | 1.3e-22 | NB-ARC domain |
| NACHT | PF05729 | 215 - 360 | 7.3e-08 | NACHT domain |
| WHD_ROQ1 | PF23282 | 441 - 509 | 1.3e-13 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 705, 1703 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 272 |
| Acc16I | TGCGCA | 1 cut(s) | 717 |
| Acc36I | ACCTGC | 1 cut(s) | 1542 |
| AccII | CGCG | 1 cut(s) | 380 |
| AccIII | TCCGGA | 1 cut(s) | 668 |
| AcoI | YGGCCR | 2 cut(s) | 3, 567 |
| AcsI | RAATTY | 4 cut(s) | 213, 460, 874, 1695 |
| AcuI | CTGAAG | 1 cut(s) | 969 |
| AdeI | CACNNNGTG | 1 cut(s) | 1139 |
| AfaI | GTAC | 6 cut(s) | 351, 543, 600, 1284, 1431, 1603 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1643 |
| AflIII | ACRYGT | 2 cut(s) | 378, 1729 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 476 |
| AjiI | CACGTC | 1 cut(s) | 1730 |
| AjnI | CCWGG | 4 cut(s) | 741, 1304, 1537, 1642 |
| Alw21I | GWGCWC | 2 cut(s) | 273, 429 |
| Alw26I | GTCTC | 1 cut(s) | 348 |
| Aor13HI | TCCGGA | 1 cut(s) | 668 |
| AoxI | GGCC | 4 cut(s) | 3, 567, 778, 1159 |
| ApeKI | GCWGC | 1 cut(s) | 1633 |
| ApoI | RAATTY | 4 cut(s) | 213, 460, 874, 1695 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1106, 1138 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1091 |
| AspLEI | GCGC | 1 cut(s) | 718 |
| AspS9I | GGNCC | 1 cut(s) | 1042 |
| AsuHPI | GGTGA | 3 cut(s) | 386, 619, 1518 |
| AsuII | TTCGAA | 2 cut(s) | 1125, 1397 |
| AvaII | GGWCC | 1 cut(s) | 1042 |
| BalI | TGGCCA | 2 cut(s) | 5, 569 |
| BanII | GRGCYC | 1 cut(s) | 273 |
| BbsI | GAAGAC | 1 cut(s) | 495 |
| Bbv12I | GWGCWC | 2 cut(s) | 273, 429 |
| BbvI | GCAGC | 1 cut(s) | 1620 |
| BccI | CCATC | 4 cut(s) | 542, 623, 1454, 1675 |
| BciT130I | CCWGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| BciVI | GTATCC | 1 cut(s) | 73 |
| BclI | TGATCA | 1 cut(s) | 981 |
| BcoDI | GTCTC | 1 cut(s) | 348 |
| BfaI | CTAG | 3 cut(s) | 182, 782, 1334 |
| BfuAI | ACCTGC | 1 cut(s) | 1542 |
| BfuI | GTATCC | 1 cut(s) | 73 |
| BglII | AGATCT | 1 cut(s) | 528 |
| BisI | GCNGC | 1 cut(s) | 1634 |
| BlsI | GCNGC | 1 cut(s) | 1635 |
| BmcAI | AGTACT | 3 cut(s) | 543, 1284, 1431 |
| Bme1390I | CCNGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| Bme18I | GGWCC | 1 cut(s) | 1042 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 476 |
| BmgBI | CACGTC | 1 cut(s) | 1730 |
| BmgT120I | GGNCC | 1 cut(s) | 1042 |
| BmrFI | CCNGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| BmrI | ACTGGG | 1 cut(s) | 572 |
| BmsI | GCATC | 3 cut(s) | 254, 1291, 1467 |
| BmuI | ACTGGG | 1 cut(s) | 572 |
| BpiI | GAAGAC | 1 cut(s) | 495 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 427, 459 |
| BpmI | CTGGAG | 1 cut(s) | 1095 |
| Bpu14I | TTCGAA | 2 cut(s) | 1125, 1397 |
| BpuEI | CTTGAG | 4 cut(s) | 413, 1091, 1140, 1398 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1575 |
| BsaJI | CCNNGG | 2 cut(s) | 405, 1305 |
| BsaWI | WCCGGW | 1 cut(s) | 668 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 171, 201, 768, 798 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1643 |
| Bse1I | ACTGG | 3 cut(s) | 90, 320, 578 |
| Bse3DI | GCAATG | 1 cut(s) | 1338 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1575 |
| BseAI | TCCGGA | 1 cut(s) | 668 |
| BseBI | CCWGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| BseDI | CCNNGG | 2 cut(s) | 405, 1305 |
| BseGI | GGATG | 4 cut(s) | 472, 665, 925, 1315 |
| BseJI | GATNNNNATC | 1 cut(s) | 1575 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1643 |
| BseMI | GCAATG | 1 cut(s) | 1338 |
| BseMII | CTCAG | 1 cut(s) | 1428 |
| BseNI | ACTGG | 3 cut(s) | 90, 320, 578 |
| BseRI | GAGGAG | 2 cut(s) | 179, 180 |
| BseXI | GCAGC | 1 cut(s) | 1620 |
| Bsh1236I | CGCG | 1 cut(s) | 380 |
| BshFI | GGCC | 4 cut(s) | 5, 569, 780, 1161 |
| BsiHKAI | GWGCWC | 2 cut(s) | 273, 429 |
| BsiSI | CCGG | 1 cut(s) | 669 |
| BslFI | GGGAC | 1 cut(s) | 676 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1643 |
| BsmAI | GTCTC | 1 cut(s) | 348 |
| BsmBI | CGTCTC | 1 cut(s) | 348 |
| BsmFI | GGGAC | 1 cut(s) | 676 |
| BsmI | GAATGC | 3 cut(s) | 1093, 1447, 1666 |
| BsnI | GGCC | 4 cut(s) | 5, 569, 780, 1161 |
| Bsp119I | TTCGAA | 2 cut(s) | 1125, 1397 |
| Bsp1286I | GDGCHC | 2 cut(s) | 273, 429 |
| Bsp13I | TCCGGA | 1 cut(s) | 668 |
| Bsp143I | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| BspANI | GGCC | 4 cut(s) | 5, 569, 780, 1161 |
| BspCNI | CTCAG | 1 cut(s) | 1429 |
| BspEI | TCCGGA | 1 cut(s) | 668 |
| BspFNI | CGCG | 1 cut(s) | 380 |
| BspHI | TCATGA | 1 cut(s) | 1564 |
| BspMI | ACCTGC | 1 cut(s) | 1542 |
| BspT104I | TTCGAA | 2 cut(s) | 1125, 1397 |
| BsrDI | GCAATG | 1 cut(s) | 1338 |
| BsrI | ACTGG | 3 cut(s) | 90, 320, 578 |
| BssECI | CCNNGG | 2 cut(s) | 405, 1305 |
| BssMI | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| BssT1I | CCWWGG | 1 cut(s) | 405 |
| Bst2UI | CCWGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| Bst4CI | ACNGT | 2 cut(s) | 342, 1709 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstBI | TTCGAA | 2 cut(s) | 1125, 1397 |
| BstC8I | GCNNGC | 3 cut(s) | 1224, 1345, 1717 |
| BstDEI | CTNAG | 3 cut(s) | 446, 806, 1437 |
| BstF5I | GGATG | 4 cut(s) | 472, 665, 925, 1315 |
| BstFNI | CGCG | 1 cut(s) | 380 |
| BstHHI | GCGC | 1 cut(s) | 718 |
| BstKTI | GATC | 6 cut(s) | 103, 151, 531, 984, 1035, 1216 |
| BstMAI | GTCTC | 1 cut(s) | 348 |
| BstMBI | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 972, 1442 |
| BstNI | CCWGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| BstNSI | RCATGY | 2 cut(s) | 1347, 1719 |
| BstSCI | CCNGG | 4 cut(s) | 741, 1304, 1537, 1642 |
| BstUI | CGCG | 1 cut(s) | 380 |
| BstV1I | GCAGC | 1 cut(s) | 1620 |
| BstV2I | GAAGAC | 1 cut(s) | 495 |
| BstX2I | RGATCY | 1 cut(s) | 528 |
| BstYI | RGATCY | 1 cut(s) | 528 |
| BsuI | GTATCC | 1 cut(s) | 73 |
| BsuRI | GGCC | 4 cut(s) | 5, 569, 780, 1161 |
| BtrI | CACGTC | 1 cut(s) | 1730 |
| BtsCI | GGATG | 4 cut(s) | 472, 665, 925, 1315 |
| BveI | ACCTGC | 1 cut(s) | 1542 |
| Cac8I | GCNNGC | 3 cut(s) | 1224, 1345, 1717 |
| CciI | TCATGA | 1 cut(s) | 1564 |
| CfoI | GCGC | 1 cut(s) | 718 |
| Cfr13I | GGNCC | 1 cut(s) | 1042 |
| CseI | GACGC | 1 cut(s) | 386 |
| CsiI | ACCWGGT | 1 cut(s) | 1642 |
| Csp6I | GTAC | 6 cut(s) | 350, 542, 599, 1283, 1430, 1602 |
| CviQI | GTAC | 6 cut(s) | 350, 542, 599, 1283, 1430, 1602 |
| DdeI | CTNAG | 3 cut(s) | 446, 806, 1437 |
| DpnI | GATC | 6 cut(s) | 102, 150, 530, 983, 1034, 1215 |
| DpnII | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| DraIII | CACNNNGTG | 1 cut(s) | 1139 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 272 |
| DriI | GACNNNNNGTC | 1 cut(s) | 476 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 272 |
| EaeI | YGGCCR | 2 cut(s) | 3, 567 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 476 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| Ecl136II | GAGCTC | 1 cut(s) | 271 |
| Eco130I | CCWWGG | 1 cut(s) | 405 |
| Eco147I | AGGCCT | 2 cut(s) | 780, 1161 |
| Eco24I | GRGCYC | 1 cut(s) | 273 |
| Eco47I | GGWCC | 1 cut(s) | 1042 |
| Eco53kI | GAGCTC | 1 cut(s) | 271 |
| Eco57I | CTGAAG | 1 cut(s) | 969 |
| EcoICRI | GAGCTC | 1 cut(s) | 271 |
| EcoRII | CCWGG | 4 cut(s) | 741, 1304, 1537, 1642 |
| EcoT14I | CCWWGG | 1 cut(s) | 405 |
| EcoT22I | ATGCAT | 3 cut(s) | 247, 1482, 1717 |
| EcoT38I | GRGCYC | 1 cut(s) | 273 |
| ErhI | CCWWGG | 1 cut(s) | 405 |
| Esp3I | CGTCTC | 1 cut(s) | 348 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 515, 547, 884, 916 |
| FaqI | GGGAC | 1 cut(s) | 676 |
| FbaI | TGATCA | 1 cut(s) | 981 |
| Fnu4HI | GCNGC | 1 cut(s) | 1634 |
| FokI | GGATG | 4 cut(s) | 459, 652, 932, 1322 |
| FriOI | GRGCYC | 1 cut(s) | 273 |
| Fsp4HI | GCNGC | 1 cut(s) | 1634 |
| FspBI | CTAG | 3 cut(s) | 182, 782, 1334 |
| FspI | TGCGCA | 1 cut(s) | 717 |
| GlaI | GCGC | 1 cut(s) | 717 |
| GluI | GCNGC | 1 cut(s) | 1634 |
| GsuI | CTGGAG | 1 cut(s) | 1095 |
| HaeIII | GGCC | 4 cut(s) | 5, 569, 780, 1161 |
| HapII | CCGG | 1 cut(s) | 669 |
| HgaI | GACGC | 1 cut(s) | 386 |
| HhaI | GCGC | 1 cut(s) | 718 |
| Hin6I | GCGC | 1 cut(s) | 716 |
| HinP1I | GCGC | 1 cut(s) | 716 |
| HincII | GTYRAC | 1 cut(s) | 155 |
| HindII | GTYRAC | 1 cut(s) | 155 |
| HindIII | AAGCTT | 3 cut(s) | 114, 614, 1669 |
| HinfI | GANTC | 9 cut(s) | 132, 206, 280, 296, 895, 1013, 1023, 1244, 1523 |
| HpaII | CCGG | 1 cut(s) | 669 |
| HphI | GGTGA | 3 cut(s) | 386, 619, 1518 |
| Hpy166II | GTNNAC | 2 cut(s) | 155, 384 |
| Hpy188I | TCNGA | 4 cut(s) | 539, 788, 1097, 1290 |
| Hpy8I | GTNNAC | 2 cut(s) | 155, 384 |
| Hpy99I | CGWCG | 1 cut(s) | 645 |
| HpyAV | CCTTC | 6 cut(s) | 48, 151, 415, 722, 1172, 1247 |
| HpyCH4III | ACNGT | 2 cut(s) | 342, 1709 |
| HpyCH4IV | ACGT | 3 cut(s) | 1138, 1546, 1729 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 972, 1442 |
| HpyF3I | CTNAG | 3 cut(s) | 446, 806, 1437 |
| HpySE526I | ACGT | 3 cut(s) | 1138, 1546, 1729 |
| HspAI | GCGC | 1 cut(s) | 716 |
| Kpn2I | TCCGGA | 1 cut(s) | 668 |
| Ksp22I | TGATCA | 1 cut(s) | 981 |
| Kzo9I | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| LmnI | GCTCC | 2 cut(s) | 928, 1630 |
| Lsp1109I | GCAGC | 1 cut(s) | 1620 |
| LweI | GCATC | 3 cut(s) | 254, 1291, 1467 |
| MabI | ACCWGGT | 1 cut(s) | 1642 |
| MaeI | CTAG | 3 cut(s) | 182, 782, 1334 |
| MaeII | ACGT | 3 cut(s) | 1138, 1546, 1729 |
| MaeIII | GTNAC | 2 cut(s) | 374, 1377 |
| MalI | GATC | 6 cut(s) | 102, 150, 530, 983, 1034, 1215 |
| MboI | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| MfeI | CAATTG | 4 cut(s) | 198, 687, 711, 955 |
| MflI | RGATCY | 1 cut(s) | 528 |
| MhlI | GDGCHC | 2 cut(s) | 273, 429 |
| MlsI | TGGCCA | 2 cut(s) | 5, 569 |
| MluI | ACGCGT | 1 cut(s) | 378 |
| MluNI | TGGCCA | 2 cut(s) | 5, 569 |
| MlyI | GAGTC | 2 cut(s) | 215, 1032 |
| MmeI | TCCRAC | 2 cut(s) | 562, 811 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 569 |
| Mph1103I | ATGCAT | 3 cut(s) | 247, 1482, 1717 |
| MroI | TCCGGA | 1 cut(s) | 668 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1091 |
| MscI | TGGCCA | 2 cut(s) | 5, 569 |
| MseI | TTAA | 8 cut(s) | 522, 816, 902, 935, 1079, 1176, 1388, 1738 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1569, 1625 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 569 |
| MspI | CCGG | 1 cut(s) | 669 |
| MspR9I | CCNGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| MunI | CAATTG | 4 cut(s) | 198, 687, 711, 955 |
| Mva1269I | GAATGC | 3 cut(s) | 1093, 1447, 1666 |
| MvaI | CCWGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| MvnI | CGCG | 1 cut(s) | 380 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 972, 1442 |
| NdeII | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| NmuCI | GTSAC | 1 cut(s) | 374 |
| NsbI | TGCGCA | 1 cut(s) | 717 |
| NsiI | ATGCAT | 3 cut(s) | 247, 1482, 1717 |
| NspI | RCATGY | 2 cut(s) | 1347, 1719 |
| NspV | TTCGAA | 2 cut(s) | 1125, 1397 |
| PaeI | GCATGC | 2 cut(s) | 1347, 1719 |
| PagI | TCATGA | 1 cut(s) | 1564 |
| PceI | AGGCCT | 2 cut(s) | 780, 1161 |
| PctI | GAATGC | 3 cut(s) | 1093, 1447, 1666 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1091 |
| PfeI | GAWTC | 7 cut(s) | 132, 280, 296, 895, 1013, 1244, 1523 |
| PkrI | GCNGC | 1 cut(s) | 1635 |
| PleI | GAGTC | 2 cut(s) | 214, 1031 |
| PpsI | GAGTC | 2 cut(s) | 214, 1031 |
| PsiI | TTATAA | 2 cut(s) | 705, 1703 |
| Psp124BI | GAGCTC | 1 cut(s) | 273 |
| Psp6I | CCWGG | 4 cut(s) | 741, 1304, 1537, 1642 |
| PspGI | CCWGG | 4 cut(s) | 741, 1304, 1537, 1642 |
| PspPI | GGNCC | 1 cut(s) | 1042 |
| PsuI | RGATCY | 1 cut(s) | 528 |
| RsaI | GTAC | 6 cut(s) | 351, 543, 600, 1284, 1431, 1603 |
| RsaNI | GTAC | 6 cut(s) | 350, 542, 599, 1283, 1430, 1602 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1569, 1625 |
| SacI | GAGCTC | 1 cut(s) | 273 |
| SaqAI | TTAA | 8 cut(s) | 522, 816, 902, 935, 1079, 1176, 1388, 1738 |
| SatI | GCNGC | 1 cut(s) | 1634 |
| Sau3AI | GATC | 6 cut(s) | 100, 148, 528, 981, 1032, 1213 |
| Sau96I | GGNCC | 1 cut(s) | 1042 |
| ScaI | AGTACT | 3 cut(s) | 543, 1284, 1431 |
| SchI | GAGTC | 2 cut(s) | 215, 1032 |
| ScrFI | CCNGG | 4 cut(s) | 743, 1306, 1539, 1644 |
| SduI | GDGCHC | 2 cut(s) | 273, 429 |
| SexAI | ACCWGGT | 1 cut(s) | 1642 |
| SfaNI | GCATC | 3 cut(s) | 254, 1291, 1467 |
| SfuI | TTCGAA | 2 cut(s) | 1125, 1397 |
| SinI | GGWCC | 1 cut(s) | 1042 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1569, 1625 |
| SmlI | CTYRAG | 4 cut(s) | 392, 1070, 1155, 1413 |
| SmoI | CTYRAG | 4 cut(s) | 392, 1070, 1155, 1413 |
| SphI | GCATGC | 2 cut(s) | 1347, 1719 |
| SseBI | AGGCCT | 2 cut(s) | 780, 1161 |
| SspI | AATATT | 1 cut(s) | 1386 |
| SspMI | CTAG | 3 cut(s) | 182, 782, 1334 |
| SstI | GAGCTC | 1 cut(s) | 273 |
| StuI | AGGCCT | 2 cut(s) | 780, 1161 |
| StyD4I | CCNGG | 4 cut(s) | 741, 1304, 1537, 1642 |
| StyI | CCWWGG | 1 cut(s) | 405 |
| TaaI | ACNGT | 2 cut(s) | 342, 1709 |
| TaiI | ACGT | 3 cut(s) | 1141, 1549, 1732 |
| TaqI | TCGA | 5 cut(s) | 754, 853, 1026, 1125, 1397 |
| TatI | WGTACW | 3 cut(s) | 541, 1282, 1429 |
| TfiI | GAWTC | 7 cut(s) | 132, 280, 296, 895, 1013, 1244, 1523 |
| Tru1I | TTAA | 8 cut(s) | 522, 816, 902, 935, 1079, 1176, 1388, 1738 |
| Tru9I | TTAA | 8 cut(s) | 522, 816, 902, 935, 1079, 1176, 1388, 1738 |
| TseFI | GTSAC | 1 cut(s) | 374 |
| TseI | GCWGC | 1 cut(s) | 1633 |
| Tsp45I | GTSAC | 1 cut(s) | 374 |
| TspDTI | ATGAA | 8 cut(s) | 30, 133, 510, 936, 1119, 1266, 1553, 1581 |
| TspGWI | ACGGA | 2 cut(s) | 789, 1155 |
| VpaK11BI | GGWCC | 1 cut(s) | 1042 |
| XapI | RAATTY | 4 cut(s) | 213, 460, 874, 1695 |
| XceI | RCATGY | 2 cut(s) | 1347, 1719 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1091 |
| XspI | CTAG | 3 cut(s) | 182, 782, 1334 |
| ZrmI | AGTACT | 3 cut(s) | 543, 1284, 1431 |
| Zsp2I | ATGCAT | 3 cut(s) | 247, 1482, 1717 |