TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 25, 502 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 22 |
| AclI | AACGTT | 1 cut(s) | 111 |
| AclWI | GGATC | 2 cut(s) | 41, 518 |
| AcsI | RAATTY | 1 cut(s) | 646 |
| AcuI | CTGAAG | 1 cut(s) | 360 |
| AcyI | GRCGYC | 1 cut(s) | 239 |
| AdeI | CACNNNGTG | 1 cut(s) | 444 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 22 |
| AgsI | TTSAA | 4 cut(s) | 389, 396, 451, 547 |
| AluBI | AGCT | 7 cut(s) | 127, 135, 302, 383, 457, 555, 618 |
| AluI | AGCT | 7 cut(s) | 127, 135, 302, 383, 457, 555, 618 |
| Alw21I | GWGCWC | 1 cut(s) | 459 |
| Alw26I | GTCTC | 1 cut(s) | 255 |
| AlwI | GGATC | 2 cut(s) | 41, 518 |
| Ama87I | CYCGRG | 2 cut(s) | 183, 303 |
| ApeKI | GCWGC | 1 cut(s) | 127 |
| ApoI | RAATTY | 1 cut(s) | 646 |
| AspS9I | GGNCC | 1 cut(s) | 13 |
| AvaI | CYCGRG | 2 cut(s) | 183, 303 |
| AvaII | GGWCC | 1 cut(s) | 13 |
| BanI | GGYRCC | 2 cut(s) | 25, 502 |
| BanII | GRGCYC | 1 cut(s) | 459 |
| BbsI | GAAGAC | 1 cut(s) | 132 |
| Bbv12I | GWGCWC | 1 cut(s) | 459 |
| BbvI | GCAGC | 1 cut(s) | 114 |
| BcoDI | GTCTC | 1 cut(s) | 255 |
| BfaI | CTAG | 3 cut(s) | 153, 374, 636 |
| BisI | GCNGC | 1 cut(s) | 128 |
| BlsI | GCNGC | 1 cut(s) | 129 |
| Bme18I | GGWCC | 1 cut(s) | 13 |
| BmeT110I | CYCGRG | 2 cut(s) | 183, 303 |
| BmgT120I | GGNCC | 1 cut(s) | 13 |
| BmiI | GGNNCC | 2 cut(s) | 27, 504 |
| BpiI | GAAGAC | 1 cut(s) | 132 |
| BsaHI | GRCGYC | 1 cut(s) | 239 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 22 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 22 |
| BseXI | GCAGC | 1 cut(s) | 114 |
| BseYI | CCCAGC | 2 cut(s) | 174, 657 |
| BshNI | GGYRCC | 2 cut(s) | 25, 502 |
| BsiHKAI | GWGCWC | 1 cut(s) | 459 |
| BsiHKCI | CYCGRG | 2 cut(s) | 183, 303 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 22 |
| BsmAI | GTCTC | 1 cut(s) | 255 |
| BsmBI | CGTCTC | 1 cut(s) | 255 |
| BsoBI | CYCGRG | 2 cut(s) | 183, 303 |
| Bsp1286I | GDGCHC | 1 cut(s) | 459 |
| Bsp143I | GATC | 2 cut(s) | 46, 523 |
| BspLI | GGNNCC | 2 cut(s) | 27, 504 |
| BspPI | GGATC | 2 cut(s) | 41, 518 |
| BspT107I | GGYRCC | 2 cut(s) | 25, 502 |
| BssMI | GATC | 2 cut(s) | 46, 523 |
| BssNI | GRCGYC | 1 cut(s) | 239 |
| Bst4CI | ACNGT | 3 cut(s) | 201, 228, 587 |
| Bst6I | CTCTTC | 3 cut(s) | 239, 336, 600 |
| BstACI | GRCGYC | 1 cut(s) | 239 |
| BstDEI | CTNAG | 1 cut(s) | 9 |
| BstKTI | GATC | 2 cut(s) | 49, 526 |
| BstMAI | GTCTC | 1 cut(s) | 255 |
| BstMBI | GATC | 2 cut(s) | 46, 523 |
| BstV1I | GCAGC | 1 cut(s) | 114 |
| BstV2I | GAAGAC | 1 cut(s) | 132 |
| BstX2I | RGATCY | 1 cut(s) | 523 |
| BstYI | RGATCY | 1 cut(s) | 523 |
| Cfr13I | GGNCC | 1 cut(s) | 13 |
| CseI | GACGC | 1 cut(s) | 247 |
| CviAII | CATG | 2 cut(s) | 441, 578 |
| CviJI | RGCY | 8 cut(s) | 127, 135, 174, 302, 383, 457, 555, 618 |
| CviKI_1 | RGCY | 8 cut(s) | 127, 135, 174, 302, 383, 457, 555, 618 |
| DdeI | CTNAG | 1 cut(s) | 9 |
| DpnI | GATC | 2 cut(s) | 48, 525 |
| DpnII | GATC | 2 cut(s) | 46, 523 |
| DraI | TTTAAA | 1 cut(s) | 486 |
| DraIII | CACNNNGTG | 1 cut(s) | 444 |
| Eam1104I | CTCTTC | 3 cut(s) | 239, 336, 600 |
| EarI | CTCTTC | 3 cut(s) | 239, 336, 600 |
| Ecl136II | GAGCTC | 1 cut(s) | 457 |
| Eco24I | GRGCYC | 1 cut(s) | 459 |
| Eco47I | GGWCC | 1 cut(s) | 13 |
| Eco53kI | GAGCTC | 1 cut(s) | 457 |
| Eco57I | CTGAAG | 1 cut(s) | 360 |
| Eco88I | CYCGRG | 2 cut(s) | 183, 303 |
| EcoICRI | GAGCTC | 1 cut(s) | 457 |
| EcoT38I | GRGCYC | 1 cut(s) | 459 |
| Esp3I | CGTCTC | 1 cut(s) | 255 |
| FaeI | CATG | 2 cut(s) | 444, 581 |
| FaiI | YATR | 7 cut(s) | 332, 429, 442, 479, 516, 579, 675 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 124, 156, 539, 571 |
| FatI | CATG | 2 cut(s) | 440, 577 |
| Fnu4HI | GCNGC | 1 cut(s) | 128 |
| FriOI | GRGCYC | 1 cut(s) | 459 |
| Fsp4HI | GCNGC | 1 cut(s) | 128 |
| FspBI | CTAG | 3 cut(s) | 153, 374, 636 |
| GluI | GCNGC | 1 cut(s) | 128 |
| GsaI | CCCAGC | 2 cut(s) | 178, 661 |
| HgaI | GACGC | 1 cut(s) | 247 |
| Hin1I | GRCGYC | 1 cut(s) | 239 |
| Hin1II | CATG | 2 cut(s) | 444, 581 |
| HincII | GTYRAC | 1 cut(s) | 115 |
| HindII | GTYRAC | 1 cut(s) | 115 |
| HindIII | AAGCTT | 1 cut(s) | 553 |
| HinfI | GANTC | 6 cut(s) | 179, 335, 392, 465, 639, 662 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 4 cut(s) | 55, 340, 421, 464 |
| Hpy188III | TCNNGA | 5 cut(s) | 183, 305, 389, 469, 666 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| Hpy99I | CGWCG | 1 cut(s) | 163 |
| HpyAV | CCTTC | 1 cut(s) | 541 |
| HpyCH4III | ACNGT | 3 cut(s) | 201, 228, 587 |
| HpyCH4IV | ACGT | 1 cut(s) | 111 |
| HpyCH4V | TGCA | 1 cut(s) | 130 |
| HpyF3I | CTNAG | 1 cut(s) | 9 |
| HpySE526I | ACGT | 1 cut(s) | 111 |
| Hsp92I | GRCGYC | 1 cut(s) | 239 |
| Hsp92II | CATG | 2 cut(s) | 444, 581 |
| Kzo9I | GATC | 2 cut(s) | 46, 523 |
| LmnI | GCTCC | 1 cut(s) | 307 |
| LpnPI | CCDG | 7 cut(s) | 29, 121, 156, 160, 482, 604, 643 |
| Lsp1109I | GCAGC | 1 cut(s) | 114 |
| MaeI | CTAG | 3 cut(s) | 153, 374, 636 |
| MaeII | ACGT | 1 cut(s) | 111 |
| MaeIII | GTNAC | 1 cut(s) | 640 |
| MalI | GATC | 2 cut(s) | 48, 525 |
| MboI | GATC | 2 cut(s) | 46, 523 |
| MboII | GAAGA | 6 cut(s) | 132, 256, 353, 426, 575, 617 |
| MflI | RGATCY | 1 cut(s) | 523 |
| MhlI | GDGCHC | 1 cut(s) | 459 |
| MluCI | AATT | 3 cut(s) | 206, 541, 646 |
| MlyI | GAGTC | 1 cut(s) | 648 |
| MmeI | TCCRAC | 2 cut(s) | 183, 328 |
| MnlI | CCTC | 3 cut(s) | 61, 337, 601 |
| MseI | TTAA | 1 cut(s) | 485 |
| NdeII | GATC | 2 cut(s) | 46, 523 |
| NlaIII | CATG | 2 cut(s) | 444, 581 |
| NlaIV | GGNNCC | 2 cut(s) | 27, 504 |
| NmuCI | GTSAC | 1 cut(s) | 640 |
| PfeI | GAWTC | 5 cut(s) | 179, 335, 392, 465, 662 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 22 |
| PkrI | GCNGC | 1 cut(s) | 129 |
| PleI | GAGTC | 1 cut(s) | 647 |
| PpsI | GAGTC | 1 cut(s) | 647 |
| Psp124BI | GAGCTC | 1 cut(s) | 459 |
| Psp1406I | AACGTT | 1 cut(s) | 111 |
| PspFI | CCCAGC | 2 cut(s) | 174, 657 |
| PspN4I | GGNNCC | 2 cut(s) | 27, 504 |
| PspPI | GGNCC | 1 cut(s) | 13 |
| PsuI | RGATCY | 1 cut(s) | 523 |
| SacI | GAGCTC | 1 cut(s) | 459 |
| SaqAI | TTAA | 1 cut(s) | 485 |
| SatI | GCNGC | 1 cut(s) | 128 |
| Sau3AI | GATC | 2 cut(s) | 46, 523 |
| Sau96I | GGNCC | 1 cut(s) | 13 |
| SchI | GAGTC | 1 cut(s) | 648 |
| SduI | GDGCHC | 1 cut(s) | 459 |
| SinI | GGWCC | 1 cut(s) | 13 |
| Sse9I | AATT | 3 cut(s) | 206, 541, 646 |
| SspMI | CTAG | 3 cut(s) | 153, 374, 636 |
| SstI | GAGCTC | 1 cut(s) | 459 |
| TaaI | ACNGT | 3 cut(s) | 201, 228, 587 |
| TaiI | ACGT | 1 cut(s) | 114 |
| TaqI | TCGA | 3 cut(s) | 45, 404, 665 |
| TasI | AATT | 3 cut(s) | 206, 541, 646 |
| TfiI | GAWTC | 5 cut(s) | 179, 335, 392, 465, 662 |
| Tru1I | TTAA | 1 cut(s) | 485 |
| Tru9I | TTAA | 1 cut(s) | 485 |
| TseFI | GTSAC | 1 cut(s) | 640 |
| TseI | GCWGC | 1 cut(s) | 127 |
| Tsp45I | GTSAC | 1 cut(s) | 640 |
| TspDTI | ATGAA | 3 cut(s) | 111, 531, 594 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 22 |
| VpaK11BI | GGWCC | 1 cut(s) | 13 |
| XapI | RAATTY | 1 cut(s) | 646 |
| XspI | CTAG | 3 cut(s) | 153, 374, 636 |