TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 24 - 189 | 1.5e-55 | TIR domain |
| TIR_2 | PF13676 | 26 - 122 | 1.1e-15 | TIR domain |
| NB-ARC | PF00931 | 207 - 376 | 3.8e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 444 - 515 | 6.9e-21 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 706 - 886 | 3.2e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 926, 1394 |
| Acc65I | GGTACC | 1 cut(s) | 3357 |
| AccB1I | GGYRCC | 1 cut(s) | 3357 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2737 |
| AccI | GTMKAC | 2 cut(s) | 131, 3030 |
| AccII | CGCG | 2 cut(s) | 2559, 3014 |
| AccIII | TCCGGA | 1 cut(s) | 505 |
| AciI | CCGC | 1 cut(s) | 995 |
| AclWI | GGATC | 7 cut(s) | 356, 369, 872, 951, 1663, 3324, 3467 |
| AcoI | YGGCCR | 1 cut(s) | 121 |
| AcuI | CTGAAG | 4 cut(s) | 351, 1704, 2417, 2678 |
| AfaI | GTAC | 7 cut(s) | 423, 1424, 1790, 2379, 2826, 3359, 3474 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 279, 800, 1138, 2737, 2791 |
| AflIII | ACRYGT | 3 cut(s) | 104, 1597, 3012 |
| AhlI | ACTAGT | 1 cut(s) | 3232 |
| AjnI | CCWGG | 2 cut(s) | 444, 2830 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2924, 2956 |
| Alw21I | GWGCWC | 1 cut(s) | 1449 |
| Alw26I | GTCTC | 2 cut(s) | 2409, 3136 |
| AlwI | GGATC | 7 cut(s) | 356, 369, 872, 951, 1663, 3324, 3467 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2286 |
| Aor13HI | TCCGGA | 1 cut(s) | 505 |
| AoxI | GGCC | 5 cut(s) | 121, 341, 1186, 1636, 2172 |
| ApeKI | GCWGC | 5 cut(s) | 390, 479, 2241, 2266, 2625 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 321, 353 |
| AseI | ATTAAT | 1 cut(s) | 3036 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 825, 1118, 1275, 2580, 2932, 3327 |
| Asp718I | GGTACC | 1 cut(s) | 3357 |
| AspLEI | GCGC | 2 cut(s) | 1489, 3378 |
| AspS9I | GGNCC | 4 cut(s) | 203, 342, 442, 2668 |
| AsuC2I | CCSGG | 4 cut(s) | 623, 1557, 1952, 3084 |
| AsuHPI | GGTGA | 6 cut(s) | 107, 1536, 1571, 2337, 3053, 3452 |
| AvaII | GGWCC | 3 cut(s) | 203, 442, 2668 |
| AxyI | CCTNAGG | 1 cut(s) | 1137 |
| BalI | TGGCCA | 1 cut(s) | 123 |
| BamHI | GGATCC | 1 cut(s) | 361 |
| BanI | GGYRCC | 1 cut(s) | 3357 |
| BauI | CACGAG | 2 cut(s) | 615, 3062 |
| BbsI | GAAGAC | 3 cut(s) | 146, 1518, 2373 |
| Bbv12I | GWGCWC | 1 cut(s) | 1449 |
| BbvCI | CCTCAGC | 1 cut(s) | 399 |
| BbvI | GCAGC | 5 cut(s) | 402, 491, 2253, 2278, 2612 |
| BccI | CCATC | 4 cut(s) | 450, 489, 2752, 3566 |
| BciT130I | CCWGG | 2 cut(s) | 446, 2832 |
| BciVI | GTATCC | 1 cut(s) | 606 |
| BclI | TGATCA | 4 cut(s) | 2788, 2878, 3265, 3412 |
| BcnI | CCSGG | 4 cut(s) | 623, 1557, 1952, 3084 |
| BcoDI | GTCTC | 2 cut(s) | 2409, 3136 |
| BcuI | ACTAGT | 1 cut(s) | 3232 |
| BfaI | CTAG | 4 cut(s) | 483, 1020, 2207, 3233 |
| BfmI | CTRYAG | 1 cut(s) | 600 |
| BfuI | GTATCC | 1 cut(s) | 606 |
| BglII | AGATCT | 2 cut(s) | 549, 3280 |
| BisI | GCNGC | 5 cut(s) | 391, 480, 2242, 2267, 2626 |
| BlpI | GCTNAGC | 1 cut(s) | 863 |
| BlsI | GCNGC | 5 cut(s) | 392, 481, 2243, 2268, 2627 |
| Bme1390I | CCNGG | 6 cut(s) | 446, 623, 1557, 1952, 2832, 3084 |
| Bme18I | GGWCC | 3 cut(s) | 203, 442, 2668 |
| BmgT120I | GGNCC | 4 cut(s) | 203, 342, 442, 2668 |
| BmiI | GGNNCC | 5 cut(s) | 363, 1778, 2035, 2179, 3359 |
| BmrFI | CCNGG | 6 cut(s) | 446, 623, 1557, 1952, 2832, 3084 |
| BmrI | ACTGGG | 1 cut(s) | 1421 |
| BmsI | GCATC | 6 cut(s) | 278, 418, 1243, 2253, 2771, 2878 |
| BmuI | ACTGGG | 1 cut(s) | 1421 |
| BpiI | GAAGAC | 3 cut(s) | 146, 1518, 2373 |
| BpmI | CTGGAG | 1 cut(s) | 2171 |
| Bpu10I | CCTNAGC | 1 cut(s) | 399 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 863 |
| BpuEI | CTTGAG | 4 cut(s) | 103, 329, 935, 2294 |
| BpuMI | CCSGG | 4 cut(s) | 623, 1557, 1952, 3084 |
| Bsa29I | ATCGAT | 1 cut(s) | 742 |
| BsaAI | YACGTR | 1 cut(s) | 107 |
| BsaBI | GATNNNNATC | 3 cut(s) | 177, 942, 1909 |
| BsaJI | CCNNGG | 3 cut(s) | 2181, 3083, 3379 |
| BsaWI | WCCGGW | 2 cut(s) | 505, 3243 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 279, 800, 1138, 2737, 2791 |
| Bse1I | ACTGG | 4 cut(s) | 124, 612, 1427, 1930 |
| Bse21I | CCTNAGG | 1 cut(s) | 1137 |
| Bse3DI | GCAATG | 3 cut(s) | 411, 874, 1356 |
| Bse8I | GATNNNNATC | 3 cut(s) | 177, 942, 1909 |
| BseAI | TCCGGA | 1 cut(s) | 505 |
| BseBI | CCWGG | 2 cut(s) | 446, 2832 |
| BseCI | ATCGAT | 1 cut(s) | 742 |
| BseDI | CCNNGG | 3 cut(s) | 2181, 3083, 3379 |
| BseJI | GATNNNNATC | 3 cut(s) | 177, 942, 1909 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 279, 800, 1138, 2737, 2791 |
| BseMI | GCAATG | 3 cut(s) | 411, 874, 1356 |
| BseMII | CTCAG | 4 cut(s) | 390, 854, 1723, 1974 |
| BseNI | ACTGG | 4 cut(s) | 124, 612, 1427, 1930 |
| BseRI | GAGGAG | 1 cut(s) | 287 |
| BseXI | GCAGC | 5 cut(s) | 402, 491, 2253, 2278, 2612 |
| BsgI | GTGCAG | 1 cut(s) | 470 |
| Bsh1236I | CGCG | 2 cut(s) | 2559, 3014 |
| BshFI | GGCC | 5 cut(s) | 123, 343, 1188, 1638, 2174 |
| BshNI | GGYRCC | 1 cut(s) | 3357 |
| BshVI | ATCGAT | 1 cut(s) | 742 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1449 |
| BsiSI | CCGG | 7 cut(s) | 506, 622, 1556, 1952, 2175, 3083, 3244 |
| BslFI | GGGAC | 1 cut(s) | 1444 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 279, 800, 1138, 2737, 2791 |
| BsmAI | GTCTC | 2 cut(s) | 2409, 3136 |
| BsmFI | GGGAC | 1 cut(s) | 1444 |
| BsmI | GAATGC | 1 cut(s) | 2720 |
| BsnI | GGCC | 5 cut(s) | 123, 343, 1188, 1638, 2174 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1449 |
| Bsp13I | TCCGGA | 1 cut(s) | 505 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 863 |
| Bsp19I | CCATGG | 1 cut(s) | 2181 |
| BspACI | CCGC | 1 cut(s) | 995 |
| BspANI | GGCC | 5 cut(s) | 123, 343, 1188, 1638, 2174 |
| BspCNI | CTCAG | 4 cut(s) | 391, 855, 1722, 1973 |
| BspDI | ATCGAT | 1 cut(s) | 742 |
| BspEI | TCCGGA | 1 cut(s) | 505 |
| BspFNI | CGCG | 2 cut(s) | 2559, 3014 |
| BspHI | TCATGA | 2 cut(s) | 2020, 2881 |
| BspLI | GGNNCC | 5 cut(s) | 363, 1778, 2035, 2179, 3359 |
| BspPI | GGATC | 7 cut(s) | 356, 369, 872, 951, 1663, 3324, 3467 |
| BspQI | GCTCTTC | 1 cut(s) | 3150 |
| BspT107I | GGYRCC | 1 cut(s) | 3357 |
| BsrDI | GCAATG | 3 cut(s) | 411, 874, 1356 |
| BsrI | ACTGG | 4 cut(s) | 124, 612, 1427, 1930 |
| BssECI | CCNNGG | 3 cut(s) | 2181, 3083, 3379 |
| BssNAI | GTATAC | 1 cut(s) | 132 |
| BssSI | CACGAG | 2 cut(s) | 615, 3062 |
| BssT1I | CCWWGG | 2 cut(s) | 2181, 3379 |
| Bst1107I | GTATAC | 1 cut(s) | 132 |
| Bst2BI | CACGAG | 2 cut(s) | 615, 3062 |
| Bst2UI | CCWGG | 2 cut(s) | 446, 2832 |
| Bst4CI | ACNGT | 5 cut(s) | 426, 709, 1207, 1884, 3147 |
| Bst6I | CTCTTC | 8 cut(s) | 37, 189, 540, 831, 1236, 1659, 2238, 3150 |
| BstBAI | YACGTR | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 3 cut(s) | 7, 1167, 1735 |
| BstDSI | CCRYGG | 1 cut(s) | 2181 |
| BstFNI | CGCG | 2 cut(s) | 2559, 3014 |
| BstHHI | GCGC | 2 cut(s) | 1489, 3378 |
| BstMAI | GTCTC | 2 cut(s) | 2409, 3136 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1495 |
| BstNI | CCWGG | 2 cut(s) | 446, 2832 |
| BstNSI | RCATGY | 4 cut(s) | 1365, 1601, 2464, 3531 |
| BstSCI | CCNGG | 6 cut(s) | 444, 621, 1555, 1950, 2830, 3082 |
| BstSFI | CTRYAG | 1 cut(s) | 600 |
| BstUI | CGCG | 2 cut(s) | 2559, 3014 |
| BstV1I | GCAGC | 5 cut(s) | 402, 491, 2253, 2278, 2612 |
| BstV2I | GAAGAC | 3 cut(s) | 146, 1518, 2373 |
| BstX2I | RGATCY | 5 cut(s) | 361, 549, 1668, 3280, 3459 |
| BstYI | RGATCY | 5 cut(s) | 361, 549, 1668, 3280, 3459 |
| BstZ17I | GTATAC | 1 cut(s) | 132 |
| Bsu15I | ATCGAT | 1 cut(s) | 742 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1137 |
| BsuI | GTATCC | 1 cut(s) | 606 |
| BsuRI | GGCC | 5 cut(s) | 123, 343, 1188, 1638, 2174 |
| BsuTUI | ATCGAT | 1 cut(s) | 742 |
| BtgI | CCRYGG | 1 cut(s) | 2181 |
| BtsI | GCAGTG | 1 cut(s) | 1449 |
| BtsIMutI | CAGTG | 8 cut(s) | 1434, 1449, 1923, 2114, 2702, 2824, 2929, 3152 |
| Cac8I | GCNNGC | 3 cut(s) | 7, 1167, 1735 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2286 |
| CciI | TCATGA | 2 cut(s) | 2020, 2881 |
| CfoI | GCGC | 2 cut(s) | 1489, 3378 |
| Cfr13I | GGNCC | 4 cut(s) | 203, 342, 442, 2668 |
| ClaI | ATCGAT | 1 cut(s) | 742 |
| CseI | GACGC | 1 cut(s) | 1523 |
| CsiI | ACCWGGT | 1 cut(s) | 444 |
| Csp6I | GTAC | 7 cut(s) | 422, 1423, 1789, 2378, 2825, 3358, 3473 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2083, 2118 |
| CviQI | GTAC | 7 cut(s) | 422, 1423, 1789, 2378, 2825, 3358, 3473 |
| EaeI | YGGCCR | 1 cut(s) | 121 |
| Eam1104I | CTCTTC | 8 cut(s) | 37, 189, 540, 831, 1236, 1659, 2238, 3150 |
| EarI | CTCTTC | 8 cut(s) | 37, 189, 540, 831, 1236, 1659, 2238, 3150 |
| Eco130I | CCWWGG | 2 cut(s) | 2181, 3379 |
| Eco147I | AGGCCT | 2 cut(s) | 1188, 1638 |
| Eco47I | GGWCC | 3 cut(s) | 203, 442, 2668 |
| Eco57I | CTGAAG | 4 cut(s) | 351, 1704, 2417, 2678 |
| Eco81I | CCTNAGG | 1 cut(s) | 1137 |
| EcoRI | GAATTC | 3 cut(s) | 1114, 1275, 2932 |
| EcoRII | CCWGG | 2 cut(s) | 444, 2830 |
| EcoT14I | CCWWGG | 2 cut(s) | 2181, 3379 |
| EcoT22I | ATGCAT | 5 cut(s) | 271, 411, 633, 1258, 1500 |
| ErhI | CCWWGG | 2 cut(s) | 2181, 3379 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 810, 842, 1287, 1319, 1448, 1480, 3147, 3179 |
| FaqI | GGGAC | 1 cut(s) | 1444 |
| FauI | CCCGC | 1 cut(s) | 988 |
| FauNDI | CATATG | 1 cut(s) | 2262 |
| FbaI | TGATCA | 4 cut(s) | 2788, 2878, 3265, 3412 |
| FblI | GTMKAC | 2 cut(s) | 131, 3030 |
| Fnu4HI | GCNGC | 5 cut(s) | 391, 480, 2242, 2267, 2626 |
| Fsp4HI | GCNGC | 5 cut(s) | 391, 480, 2242, 2267, 2626 |
| FspBI | CTAG | 4 cut(s) | 483, 1020, 2207, 3233 |
| GlaI | GCGC | 2 cut(s) | 1488, 3377 |
| GluI | GCNGC | 5 cut(s) | 391, 480, 2242, 2267, 2626 |
| GsuI | CTGGAG | 1 cut(s) | 2171 |
| HaeIII | GGCC | 5 cut(s) | 123, 343, 1188, 1638, 2174 |
| HapII | CCGG | 7 cut(s) | 506, 622, 1556, 1952, 2175, 3083, 3244 |
| HgaI | GACGC | 1 cut(s) | 1523 |
| HhaI | GCGC | 2 cut(s) | 1489, 3378 |
| Hin6I | GCGC | 2 cut(s) | 1487, 3376 |
| HinP1I | GCGC | 2 cut(s) | 1487, 3376 |
| HincII | GTYRAC | 1 cut(s) | 2316 |
| HindII | GTYRAC | 1 cut(s) | 2316 |
| HindIII | AAGCTT | 3 cut(s) | 1092, 2045, 3216 |
| HpaII | CCGG | 7 cut(s) | 506, 622, 1556, 1952, 2175, 3083, 3244 |
| HphI | GGTGA | 6 cut(s) | 107, 1536, 1571, 2337, 3053, 3452 |
| Hpy166II | GTNNAC | 6 cut(s) | 132, 1562, 2316, 2466, 3031, 3061 |
| Hpy8I | GTNNAC | 6 cut(s) | 132, 1562, 2316, 2466, 3031, 3061 |
| HpyCH4III | ACNGT | 5 cut(s) | 426, 709, 1207, 1884, 3147 |
| HpyCH4IV | ACGT | 4 cut(s) | 106, 1564, 1873, 3346 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1495 |
| HpySE526I | ACGT | 4 cut(s) | 106, 1564, 1873, 3346 |
| HspAI | GCGC | 2 cut(s) | 1487, 3376 |
| Kpn2I | TCCGGA | 1 cut(s) | 505 |
| KpnI | GGTACC | 1 cut(s) | 3361 |
| Ksp22I | TGATCA | 4 cut(s) | 2788, 2878, 3265, 3412 |
| LguI | GCTCTTC | 1 cut(s) | 3150 |
| LmnI | GCTCC | 2 cut(s) | 2378, 2700 |
| Lsp1109I | GCAGC | 5 cut(s) | 402, 491, 2253, 2278, 2612 |
| LweI | GCATC | 6 cut(s) | 278, 418, 1243, 2253, 2771, 2878 |
| MabI | ACCWGGT | 1 cut(s) | 444 |
| MaeI | CTAG | 4 cut(s) | 483, 1020, 2207, 3233 |
| MaeII | ACGT | 4 cut(s) | 106, 1564, 1873, 3346 |
| MaeIII | GTNAC | 3 cut(s) | 68, 1415, 2050 |
| MfeI | CAATTG | 2 cut(s) | 732, 812 |
| MflI | RGATCY | 5 cut(s) | 361, 549, 1668, 3280, 3459 |
| MhlI | GDGCHC | 1 cut(s) | 1449 |
| MlsI | TGGCCA | 1 cut(s) | 123 |
| MluI | ACGCGT | 1 cut(s) | 3012 |
| MluNI | TGGCCA | 1 cut(s) | 123 |
| MlyI | GAGTC | 4 cut(s) | 239, 2418, 3036, 3393 |
| MmeI | TCCRAC | 6 cut(s) | 1091, 1723, 2392, 2537, 2897, 3253 |
| Mox20I | TGGCCA | 1 cut(s) | 123 |
| Mph1103I | ATGCAT | 5 cut(s) | 271, 411, 633, 1258, 1500 |
| MroI | TCCGGA | 1 cut(s) | 505 |
| MroXI | GAANNNNTTC | 6 cut(s) | 825, 1118, 1275, 2580, 2932, 3327 |
| MscI | TGGCCA | 1 cut(s) | 123 |
| MslI | CAYNNNNRTG | 3 cut(s) | 414, 1587, 1677 |
| Msp20I | TGGCCA | 1 cut(s) | 123 |
| MspI | CCGG | 7 cut(s) | 506, 622, 1556, 1952, 2175, 3083, 3244 |
| MspR9I | CCNGG | 6 cut(s) | 446, 623, 1557, 1952, 2832, 3084 |
| MunI | CAATTG | 2 cut(s) | 732, 812 |
| Mva1269I | GAATGC | 1 cut(s) | 2720 |
| MvaI | CCWGG | 2 cut(s) | 446, 2832 |
| MvnI | CGCG | 2 cut(s) | 2559, 3014 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1495 |
| NciI | CCSGG | 4 cut(s) | 623, 1557, 1952, 3084 |
| NcoI | CCATGG | 1 cut(s) | 2181 |
| NdeI | CATATG | 1 cut(s) | 2262 |
| NlaIV | GGNNCC | 5 cut(s) | 363, 1778, 2035, 2179, 3359 |
| NmuCI | GTSAC | 2 cut(s) | 1415, 2050 |
| NsiI | ATGCAT | 5 cut(s) | 271, 411, 633, 1258, 1500 |
| NspI | RCATGY | 4 cut(s) | 1365, 1601, 2464, 3531 |
| PagI | TCATGA | 2 cut(s) | 2020, 2881 |
| PceI | AGGCCT | 2 cut(s) | 1188, 1638 |
| PciI | ACATGT | 1 cut(s) | 1597 |
| PciSI | GCTCTTC | 1 cut(s) | 3150 |
| PctI | GAATGC | 1 cut(s) | 2720 |
| PdmI | GAANNNNTTC | 6 cut(s) | 825, 1118, 1275, 2580, 2932, 3327 |
| PflFI | GACNNNGTC | 1 cut(s) | 2056 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2737 |
| PfoI | TCCNGGA | 3 cut(s) | 621, 1950, 2830 |
| PkrI | GCNGC | 5 cut(s) | 392, 481, 2243, 2268, 2627 |
| PleI | GAGTC | 4 cut(s) | 238, 2417, 3035, 3392 |
| PpsI | GAGTC | 4 cut(s) | 238, 2417, 3035, 3392 |
| Ppu21I | YACGTR | 1 cut(s) | 107 |
| PscI | ACATGT | 1 cut(s) | 1597 |
| PshBI | ATTAAT | 1 cut(s) | 3036 |
| PsiI | TTATAA | 2 cut(s) | 926, 1394 |
| Psp6I | CCWGG | 2 cut(s) | 444, 2830 |
| PspGI | CCWGG | 2 cut(s) | 444, 2830 |
| PspN4I | GGNNCC | 5 cut(s) | 363, 1778, 2035, 2179, 3359 |
| PspPI | GGNCC | 4 cut(s) | 203, 342, 442, 2668 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2286 |
| PsuI | RGATCY | 5 cut(s) | 361, 549, 1668, 3280, 3459 |
| PsyI | GACNNNGTC | 1 cut(s) | 2056 |
| RsaI | GTAC | 7 cut(s) | 423, 1424, 1790, 2379, 2826, 3359, 3474 |
| RsaNI | GTAC | 7 cut(s) | 422, 1423, 1789, 2378, 2825, 3358, 3473 |
| RseI | CAYNNNNRTG | 3 cut(s) | 414, 1587, 1677 |
| SapI | GCTCTTC | 1 cut(s) | 3150 |
| SatI | GCNGC | 5 cut(s) | 391, 480, 2242, 2267, 2626 |
| Sau96I | GGNCC | 4 cut(s) | 203, 342, 442, 2668 |
| SchI | GAGTC | 4 cut(s) | 239, 2418, 3036, 3393 |
| ScrFI | CCNGG | 6 cut(s) | 446, 623, 1557, 1952, 2832, 3084 |
| SduI | GDGCHC | 1 cut(s) | 1449 |
| SexAI | ACCWGGT | 1 cut(s) | 444 |
| SfaNI | GCATC | 6 cut(s) | 278, 418, 1243, 2253, 2771, 2878 |
| SfcI | CTRYAG | 1 cut(s) | 600 |
| SinI | GGWCC | 3 cut(s) | 203, 442, 2668 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 414, 1587, 1677 |
| SmlI | CTYRAG | 4 cut(s) | 82, 308, 950, 2273 |
| SmoI | CTYRAG | 4 cut(s) | 82, 308, 950, 2273 |
| SpeI | ACTAGT | 1 cut(s) | 3232 |
| SseBI | AGGCCT | 2 cut(s) | 1188, 1638 |
| SsiI | CCGC | 1 cut(s) | 995 |
| SspI | AATATT | 3 cut(s) | 538, 2842, 3051 |
| SspMI | CTAG | 4 cut(s) | 483, 1020, 2207, 3233 |
| StuI | AGGCCT | 2 cut(s) | 1188, 1638 |
| StyD4I | CCNGG | 6 cut(s) | 444, 621, 1555, 1950, 2830, 3082 |
| StyI | CCWWGG | 2 cut(s) | 2181, 3379 |
| TaaI | ACNGT | 5 cut(s) | 426, 709, 1207, 1884, 3147 |
| TaiI | ACGT | 4 cut(s) | 109, 1567, 1876, 3349 |
| TaqII | GACCGA | 1 cut(s) | 1146 |
| TatI | WGTACW | 1 cut(s) | 2824 |
| TscAI | CASTG | 8 cut(s) | 1434, 1449, 1930, 2121, 2702, 2824, 2929, 3152 |
| TseFI | GTSAC | 2 cut(s) | 1415, 2050 |
| TseI | GCWGC | 5 cut(s) | 390, 479, 2241, 2266, 2625 |
| Tsp45I | GTSAC | 2 cut(s) | 1415, 2050 |
| TspGWI | ACGGA | 1 cut(s) | 2365 |
| TspRI | CASTG | 8 cut(s) | 1434, 1449, 1930, 2121, 2702, 2824, 2929, 3152 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2056 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2737 |
| VpaK11BI | GGWCC | 3 cut(s) | 203, 442, 2668 |
| VspI | ATTAAT | 1 cut(s) | 3036 |
| XbaI | TCTAGA | 1 cut(s) | 2206 |
| XceI | RCATGY | 4 cut(s) | 1365, 1601, 2464, 3531 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 283 |
| XmiI | GTMKAC | 2 cut(s) | 131, 3030 |
| XmnI | GAANNNNTTC | 6 cut(s) | 825, 1118, 1275, 2580, 2932, 3327 |
| XspI | CTAG | 4 cut(s) | 483, 1020, 2207, 3233 |
| Zsp2I | ATGCAT | 5 cut(s) | 271, 411, 633, 1258, 1500 |