TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 521 |
| AclI | AACGTT | 1 cut(s) | 205 |
| AclWI | GGATC | 1 cut(s) | 408 |
| AcsI | RAATTY | 2 cut(s) | 221, 244 |
| AdeI | CACNNNGTG | 1 cut(s) | 41 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 555 |
| AgsI | TTSAA | 5 cut(s) | 202, 221, 233, 250, 390 |
| AjiI | CACGTC | 1 cut(s) | 365 |
| AjnI | CCWGG | 1 cut(s) | 157 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 153, 185 |
| AluBI | AGCT | 1 cut(s) | 101 |
| AluI | AGCT | 1 cut(s) | 101 |
| Alw26I | GTCTC | 1 cut(s) | 371 |
| AlwI | GGATC | 1 cut(s) | 408 |
| ApeKI | GCWGC | 1 cut(s) | 412 |
| ApoI | RAATTY | 2 cut(s) | 221, 244 |
| AspLEI | GCGC | 2 cut(s) | 521, 523 |
| AspS9I | GGNCC | 1 cut(s) | 484 |
| AsuII | TTCGAA | 1 cut(s) | 211 |
| AsuNHI | GCTAGC | 1 cut(s) | 97 |
| AvaII | GGWCC | 1 cut(s) | 484 |
| BbvI | GCAGC | 1 cut(s) | 399 |
| BccI | CCATC | 2 cut(s) | 7, 60 |
| BciT130I | CCWGG | 1 cut(s) | 159 |
| BclI | TGATCA | 1 cut(s) | 289 |
| BcoDI | GTCTC | 1 cut(s) | 371 |
| BfaI | CTAG | 1 cut(s) | 98 |
| BisI | GCNGC | 1 cut(s) | 413 |
| BlsI | GCNGC | 1 cut(s) | 414 |
| Bme1390I | CCNGG | 1 cut(s) | 159 |
| Bme18I | GGWCC | 1 cut(s) | 484 |
| BmgBI | CACGTC | 1 cut(s) | 365 |
| BmgT120I | GGNCC | 1 cut(s) | 484 |
| BmiI | GGNNCC | 1 cut(s) | 171 |
| BmrFI | CCNGG | 1 cut(s) | 159 |
| BmsI | GCATC | 1 cut(s) | 574 |
| BmtI | GCTAGC | 1 cut(s) | 101 |
| Bpu14I | TTCGAA | 1 cut(s) | 211 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 555 |
| Bse3DI | GCAATG | 1 cut(s) | 461 |
| BseBI | CCWGG | 1 cut(s) | 159 |
| BseGI | GGATG | 2 cut(s) | 84, 544 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 555 |
| BseMI | GCAATG | 1 cut(s) | 461 |
| BsePI | GCGCGC | 1 cut(s) | 519 |
| BseXI | GCAGC | 1 cut(s) | 399 |
| Bsh1236I | CGCG | 1 cut(s) | 521 |
| BslFI | GGGAC | 1 cut(s) | 269 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 555 |
| BsmAI | GTCTC | 1 cut(s) | 371 |
| BsmBI | CGTCTC | 1 cut(s) | 371 |
| BsmFI | GGGAC | 1 cut(s) | 269 |
| Bsp119I | TTCGAA | 1 cut(s) | 211 |
| Bsp143I | GATC | 3 cut(s) | 103, 289, 400 |
| BspFNI | CGCG | 1 cut(s) | 521 |
| BspLI | GGNNCC | 1 cut(s) | 171 |
| BspOI | GCTAGC | 1 cut(s) | 101 |
| BspPI | GGATC | 1 cut(s) | 408 |
| BspT104I | TTCGAA | 1 cut(s) | 211 |
| BsrDI | GCAATG | 1 cut(s) | 461 |
| BssHII | GCGCGC | 1 cut(s) | 519 |
| BssMI | GATC | 3 cut(s) | 103, 289, 400 |
| Bst2UI | CCWGG | 1 cut(s) | 159 |
| Bst4CI | ACNGT | 1 cut(s) | 378 |
| Bst6I | CTCTTC | 2 cut(s) | 113, 157 |
| BstBI | TTCGAA | 1 cut(s) | 211 |
| BstC8I | GCNNGC | 2 cut(s) | 99, 521 |
| BstF5I | GGATG | 2 cut(s) | 84, 544 |
| BstFNI | CGCG | 1 cut(s) | 521 |
| BstHHI | GCGC | 2 cut(s) | 521, 523 |
| BstKTI | GATC | 3 cut(s) | 106, 292, 403 |
| BstMAI | GTCTC | 1 cut(s) | 371 |
| BstMBI | GATC | 3 cut(s) | 103, 289, 400 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 463 |
| BstNI | CCWGG | 1 cut(s) | 159 |
| BstSCI | CCNGG | 1 cut(s) | 157 |
| BstUI | CGCG | 1 cut(s) | 521 |
| BstV1I | GCAGC | 1 cut(s) | 399 |
| BtrI | CACGTC | 1 cut(s) | 365 |
| BtsCI | GGATG | 2 cut(s) | 84, 544 |
| Cac8I | GCNNGC | 2 cut(s) | 99, 521 |
| CfoI | GCGC | 2 cut(s) | 521, 523 |
| Cfr13I | GGNCC | 1 cut(s) | 484 |
| CseI | GACGC | 2 cut(s) | 103, 446 |
| CviAII | CATG | 1 cut(s) | 404 |
| CviJI | RGCY | 5 cut(s) | 47, 101, 141, 272, 412 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 101, 141, 272, 412 |
| DpnI | GATC | 3 cut(s) | 105, 291, 402 |
| DpnII | GATC | 3 cut(s) | 103, 289, 400 |
| DraIII | CACNNNGTG | 1 cut(s) | 41 |
| Eam1104I | CTCTTC | 2 cut(s) | 113, 157 |
| EarI | CTCTTC | 2 cut(s) | 113, 157 |
| Eco47I | GGWCC | 1 cut(s) | 484 |
| EcoRII | CCWGG | 1 cut(s) | 157 |
| Esp3I | CGTCTC | 1 cut(s) | 371 |
| FaeI | CATG | 1 cut(s) | 407 |
| FaqI | GGGAC | 1 cut(s) | 269 |
| FatI | CATG | 1 cut(s) | 403 |
| FbaI | TGATCA | 1 cut(s) | 289 |
| Fnu4HI | GCNGC | 1 cut(s) | 413 |
| FokI | GGATG | 2 cut(s) | 91, 531 |
| Fsp4HI | GCNGC | 1 cut(s) | 413 |
| FspBI | CTAG | 1 cut(s) | 98 |
| GlaI | GCGC | 2 cut(s) | 520, 522 |
| GluI | GCNGC | 1 cut(s) | 413 |
| HgaI | GACGC | 2 cut(s) | 103, 446 |
| HhaI | GCGC | 2 cut(s) | 521, 523 |
| Hin1II | CATG | 1 cut(s) | 407 |
| Hin6I | GCGC | 2 cut(s) | 519, 521 |
| HinP1I | GCGC | 2 cut(s) | 519, 521 |
| HinfI | GANTC | 1 cut(s) | 395 |
| Hpy166II | GTNNAC | 1 cut(s) | 52 |
| Hpy188I | TCNGA | 4 cut(s) | 65, 400, 481, 502 |
| Hpy188III | TCNNGA | 1 cut(s) | 368 |
| Hpy8I | GTNNAC | 1 cut(s) | 52 |
| HpyAV | CCTTC | 1 cut(s) | 207 |
| HpyCH4III | ACNGT | 1 cut(s) | 378 |
| HpyCH4IV | ACGT | 2 cut(s) | 205, 364 |
| HpyCH4V | TGCA | 5 cut(s) | 301, 415, 567, 587, 595 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 463 |
| HpySE526I | ACGT | 2 cut(s) | 205, 364 |
| Hsp92II | CATG | 1 cut(s) | 407 |
| HspAI | GCGC | 2 cut(s) | 519, 521 |
| Ksp22I | TGATCA | 1 cut(s) | 289 |
| Kzo9I | GATC | 3 cut(s) | 103, 289, 400 |
| LpnPI | CCDG | 7 cut(s) | 16, 52, 144, 171, 249, 340, 509 |
| Lsp1109I | GCAGC | 1 cut(s) | 399 |
| LweI | GCATC | 1 cut(s) | 574 |
| MaeI | CTAG | 1 cut(s) | 98 |
| MaeII | ACGT | 2 cut(s) | 205, 364 |
| MalI | GATC | 3 cut(s) | 105, 291, 402 |
| MboI | GATC | 3 cut(s) | 103, 289, 400 |
| MboII | GAAGA | 3 cut(s) | 100, 117, 174 |
| MfeI | CAATTG | 1 cut(s) | 590 |
| MluCI | AATT | 6 cut(s) | 25, 147, 221, 244, 538, 590 |
| MlyI | GAGTC | 1 cut(s) | 404 |
| MmeI | TCCRAC | 2 cut(s) | 71, 378 |
| MnlI | CCTC | 4 cut(s) | 37, 160, 475, 549 |
| MseI | TTAA | 2 cut(s) | 240, 327 |
| MslI | CAYNNNNRTG | 1 cut(s) | 345 |
| MspR9I | CCNGG | 1 cut(s) | 159 |
| MunI | CAATTG | 1 cut(s) | 590 |
| MvaI | CCWGG | 1 cut(s) | 159 |
| MvnI | CGCG | 1 cut(s) | 521 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 463 |
| NdeII | GATC | 3 cut(s) | 103, 289, 400 |
| NheI | GCTAGC | 1 cut(s) | 97 |
| NlaIII | CATG | 1 cut(s) | 407 |
| NlaIV | GGNNCC | 1 cut(s) | 171 |
| NspV | TTCGAA | 1 cut(s) | 211 |
| PauI | GCGCGC | 1 cut(s) | 519 |
| PfoI | TCCNGGA | 1 cut(s) | 157 |
| PkrI | GCNGC | 1 cut(s) | 414 |
| PleI | GAGTC | 1 cut(s) | 403 |
| PpsI | GAGTC | 1 cut(s) | 403 |
| Psp1406I | AACGTT | 1 cut(s) | 205 |
| Psp6I | CCWGG | 1 cut(s) | 157 |
| PspGI | CCWGG | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 1 cut(s) | 171 |
| PspPI | GGNCC | 1 cut(s) | 484 |
| PteI | GCGCGC | 1 cut(s) | 519 |
| RseI | CAYNNNNRTG | 1 cut(s) | 345 |
| SaqAI | TTAA | 2 cut(s) | 240, 327 |
| SatI | GCNGC | 1 cut(s) | 413 |
| Sau3AI | GATC | 3 cut(s) | 103, 289, 400 |
| Sau96I | GGNCC | 1 cut(s) | 484 |
| SchI | GAGTC | 1 cut(s) | 404 |
| ScrFI | CCNGG | 1 cut(s) | 159 |
| SetI | ASST | 6 cut(s) | 103, 171, 208, 218, 367, 609 |
| SfaNI | GCATC | 1 cut(s) | 574 |
| SfuI | TTCGAA | 1 cut(s) | 211 |
| SinI | GGWCC | 1 cut(s) | 484 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 345 |
| Sse9I | AATT | 6 cut(s) | 25, 147, 221, 244, 538, 590 |
| SspMI | CTAG | 1 cut(s) | 98 |
| StyD4I | CCNGG | 1 cut(s) | 157 |
| TaaI | ACNGT | 1 cut(s) | 378 |
| TaiI | ACGT | 2 cut(s) | 208, 367 |
| TaqI | TCGA | 3 cut(s) | 151, 211, 369 |
| TaqII | GACCGA | 1 cut(s) | 501 |
| TasI | AATT | 6 cut(s) | 25, 147, 221, 244, 538, 590 |
| Tru1I | TTAA | 2 cut(s) | 240, 327 |
| Tru9I | TTAA | 2 cut(s) | 240, 327 |
| TseI | GCWGC | 1 cut(s) | 412 |
| TspDTI | ATGAA | 3 cut(s) | 20, 329, 363 |
| VpaK11BI | GGWCC | 1 cut(s) | 484 |
| XapI | RAATTY | 2 cut(s) | 221, 244 |
| XspI | CTAG | 1 cut(s) | 98 |