TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 711 |
| AarI | CACCTGC | 1 cut(s) | 2339 |
| Acc36I | ACCTGC | 1 cut(s) | 2339 |
| Acc65I | GGTACC | 1 cut(s) | 53 |
| AccB1I | GGYRCC | 1 cut(s) | 53 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2131 |
| AccI | GTMKAC | 1 cut(s) | 372 |
| AccII | CGCG | 1 cut(s) | 142 |
| AccIII | TCCGGA | 1 cut(s) | 2317 |
| AciI | CCGC | 4 cut(s) | 2053, 2546, 2598, 2613 |
| AclWI | GGATC | 1 cut(s) | 389 |
| AcoI | YGGCCR | 1 cut(s) | 2216 |
| AcsI | RAATTY | 8 cut(s) | 270, 728, 1602, 1611, 2161, 2395, 2576, 2691 |
| AcuI | CTGAAG | 2 cut(s) | 1128, 1386 |
| AcvI | CACGTG | 1 cut(s) | 1170 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 312, 1048, 1860, 2131, 2265 |
| AflII | CTTAAG | 1 cut(s) | 1781 |
| AflIII | ACRYGT | 1 cut(s) | 1167 |
| AgeI | ACCGGT | 1 cut(s) | 2000 |
| AjiI | CACGTC | 1 cut(s) | 2143 |
| AjnI | CCWGG | 4 cut(s) | 1441, 2177, 2242, 2389 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 949, 981 |
| AluBI | AGCT | 5 cut(s) | 485, 622, 1578, 1930, 2610 |
| AluI | AGCT | 5 cut(s) | 485, 622, 1578, 1930, 2610 |
| Alw21I | GWGCWC | 3 cut(s) | 8, 1497, 2434 |
| Alw26I | GTCTC | 5 cut(s) | 603, 812, 828, 1660, 2202 |
| Alw44I | GTGCAC | 1 cut(s) | 1493 |
| AlwI | GGATC | 1 cut(s) | 389 |
| Ama87I | CYCGRG | 2 cut(s) | 1739, 2273 |
| Aor13HI | TCCGGA | 1 cut(s) | 2317 |
| AoxI | GGCC | 8 cut(s) | 18, 157, 211, 784, 1347, 2216, 2256, 2644 |
| ApaLI | GTGCAC | 1 cut(s) | 1493 |
| ApeKI | GCWGC | 1 cut(s) | 2610 |
| ApoI | RAATTY | 8 cut(s) | 270, 728, 1602, 1611, 2161, 2395, 2576, 2691 |
| AseI | ATTAAT | 1 cut(s) | 2484 |
| AsiGI | ACCGGT | 1 cut(s) | 2000 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 505, 1113, 1266, 1577 |
| Asp718I | GGTACC | 1 cut(s) | 53 |
| AspA2I | CCTAGG | 1 cut(s) | 1721 |
| AspLEI | GCGC | 2 cut(s) | 144, 242 |
| AspS9I | GGNCC | 5 cut(s) | 18, 934, 1348, 2256, 2667 |
| AsuHPI | GGTGA | 5 cut(s) | 1079, 1631, 1758, 2164, 2320 |
| AvaI | CYCGRG | 2 cut(s) | 1739, 2273 |
| AvaII | GGWCC | 2 cut(s) | 934, 2667 |
| AvrII | CCTAGG | 1 cut(s) | 1721 |
| BaeGI | GKGCMC | 1 cut(s) | 1497 |
| BanI | GGYRCC | 1 cut(s) | 53 |
| BanII | GRGCYC | 1 cut(s) | 1853 |
| BauI | CACGAG | 1 cut(s) | 1002 |
| BbrPI | CACGTG | 1 cut(s) | 1170 |
| BbsI | GAAGAC | 2 cut(s) | 485, 1589 |
| Bbv12I | GWGCWC | 3 cut(s) | 8, 1497, 2434 |
| BbvI | GCAGC | 1 cut(s) | 2597 |
| BccI | CCATC | 8 cut(s) | 203, 406, 468, 1309, 1625, 1738, 2227, 2596 |
| BceAI | ACGGC | 5 cut(s) | 1555, 2202, 2282, 2540, 2611 |
| BciT130I | CCWGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| BciVI | GTATCC | 1 cut(s) | 130 |
| BcoDI | GTCTC | 5 cut(s) | 603, 812, 828, 1660, 2202 |
| BfaI | CTAG | 8 cut(s) | 824, 1121, 1244, 1397, 1722, 1865, 2289, 2435 |
| BfmI | CTRYAG | 3 cut(s) | 797, 1925, 1951 |
| BfrI | CTTAAG | 1 cut(s) | 1781 |
| BfuAI | ACCTGC | 1 cut(s) | 2339 |
| BfuI | GTATCC | 1 cut(s) | 130 |
| BglII | AGATCT | 2 cut(s) | 535, 1867 |
| BisI | GCNGC | 3 cut(s) | 2053, 2546, 2611 |
| BlnI | CCTAGG | 1 cut(s) | 1721 |
| BlsI | GCNGC | 3 cut(s) | 2054, 2547, 2612 |
| Bme1390I | CCNGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| Bme18I | GGWCC | 2 cut(s) | 934, 2667 |
| BmeT110I | CYCGRG | 2 cut(s) | 1739, 2273 |
| BmgBI | CACGTC | 1 cut(s) | 2143 |
| BmgT120I | GGNCC | 5 cut(s) | 18, 934, 1348, 2256, 2667 |
| BmiI | GGNNCC | 2 cut(s) | 19, 55 |
| BmrFI | CCNGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| BmsI | GCATC | 5 cut(s) | 876, 1168, 1374, 1776, 2099 |
| BpiI | GAAGAC | 2 cut(s) | 485, 1589 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 522, 554 |
| Bsa29I | ATCGAT | 1 cut(s) | 2346 |
| BsaAI | YACGTR | 4 cut(s) | 1151, 1170, 2340, 2623 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1479, 1635, 1716 |
| BsaJI | CCNNGG | 3 cut(s) | 1721, 1769, 2090 |
| BsaWI | WCCGGW | 3 cut(s) | 2000, 2167, 2317 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1626, 1656, 2607, 2637 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 312, 1048, 1860, 2131, 2265 |
| Bse118I | RCCGGY | 1 cut(s) | 2000 |
| Bse1I | ACTGG | 3 cut(s) | 937, 1507, 1682 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1479, 1635, 1716 |
| BseAI | TCCGGA | 1 cut(s) | 2317 |
| BseBI | CCWGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| BseCI | ATCGAT | 1 cut(s) | 2346 |
| BseDI | CCNNGG | 3 cut(s) | 1721, 1769, 2090 |
| BseGI | GGATG | 7 cut(s) | 479, 1389, 2100, 2176, 2219, 2607, 2644 |
| BseJI | GATNNNNATC | 3 cut(s) | 1479, 1635, 1716 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 312, 1048, 1860, 2131, 2265 |
| BseMII | CTCAG | 6 cut(s) | 807, 1722, 2485, 2519, 2694, 2697 |
| BseNI | ACTGG | 3 cut(s) | 937, 1507, 1682 |
| BseRI | GAGGAG | 5 cut(s) | 144, 237, 546, 1817, 2079 |
| BseSI | GKGCMC | 1 cut(s) | 1497 |
| BseXI | GCAGC | 1 cut(s) | 2597 |
| BsgI | GTGCAG | 1 cut(s) | 2100 |
| Bsh1236I | CGCG | 1 cut(s) | 142 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2001 |
| BshFI | GGCC | 8 cut(s) | 20, 159, 213, 786, 1349, 2218, 2258, 2646 |
| BshNI | GGYRCC | 1 cut(s) | 53 |
| BshTI | ACCGGT | 1 cut(s) | 2000 |
| BshVI | ATCGAT | 1 cut(s) | 2346 |
| BsiEI | CGRYCG | 1 cut(s) | 2001 |
| BsiHKAI | GWGCWC | 3 cut(s) | 8, 1497, 2434 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1739, 2273 |
| BsiSI | CCGG | 3 cut(s) | 2001, 2168, 2318 |
| BsiWI | CGTACG | 1 cut(s) | 646 |
| BslFI | GGGAC | 1 cut(s) | 587 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 312, 1048, 1860, 2131, 2265 |
| BsmAI | GTCTC | 5 cut(s) | 603, 812, 828, 1660, 2202 |
| BsmFI | GGGAC | 1 cut(s) | 587 |
| BsnI | GGCC | 8 cut(s) | 20, 159, 213, 786, 1349, 2218, 2258, 2646 |
| BsoBI | CYCGRG | 2 cut(s) | 1739, 2273 |
| Bsp1286I | GDGCHC | 4 cut(s) | 8, 1497, 1853, 2434 |
| Bsp13I | TCCGGA | 1 cut(s) | 2317 |
| Bsp19I | CCATGG | 1 cut(s) | 1769 |
| BspACI | CCGC | 4 cut(s) | 2053, 2546, 2598, 2613 |
| BspANI | GGCC | 8 cut(s) | 20, 159, 213, 786, 1349, 2218, 2258, 2646 |
| BspCNI | CTCAG | 6 cut(s) | 808, 1721, 2484, 2520, 2695, 2696 |
| BspDI | ATCGAT | 1 cut(s) | 2346 |
| BspEI | TCCGGA | 1 cut(s) | 2317 |
| BspFNI | CGCG | 1 cut(s) | 142 |
| BspHI | TCATGA | 2 cut(s) | 448, 870 |
| BspLI | GGNNCC | 2 cut(s) | 19, 55 |
| BspMI | ACCTGC | 1 cut(s) | 2339 |
| BspPI | GGATC | 1 cut(s) | 389 |
| BspQI | GCTCTTC | 1 cut(s) | 612 |
| BspT107I | GGYRCC | 1 cut(s) | 53 |
| BspTI | CTTAAG | 1 cut(s) | 1781 |
| BsrFI | RCCGGY | 1 cut(s) | 2000 |
| BsrI | ACTGG | 3 cut(s) | 937, 1507, 1682 |
| BssAI | RCCGGY | 1 cut(s) | 2000 |
| BssECI | CCNNGG | 3 cut(s) | 1721, 1769, 2090 |
| BssNAI | GTATAC | 1 cut(s) | 373 |
| BssSI | CACGAG | 1 cut(s) | 1002 |
| BssT1I | CCWWGG | 2 cut(s) | 1721, 1769 |
| Bst1107I | GTATAC | 1 cut(s) | 373 |
| Bst2BI | CACGAG | 1 cut(s) | 1002 |
| Bst2UI | CCWGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| Bst4CI | ACNGT | 4 cut(s) | 1595, 2048, 2121, 2561 |
| Bst6I | CTCTTC | 7 cut(s) | 28, 46, 52, 79, 85, 612, 2207 |
| BstAFI | CTTAAG | 1 cut(s) | 1781 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1393 |
| BstBAI | YACGTR | 4 cut(s) | 1151, 1170, 2340, 2623 |
| BstDSI | CCRYGG | 1 cut(s) | 1769 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1858 |
| BstF5I | GGATG | 7 cut(s) | 479, 1389, 2100, 2176, 2219, 2607, 2644 |
| BstFNI | CGCG | 1 cut(s) | 142 |
| BstHHI | GCGC | 2 cut(s) | 144, 242 |
| BstMAI | GTCTC | 5 cut(s) | 603, 812, 828, 1660, 2202 |
| BstMCI | CGRYCG | 1 cut(s) | 2001 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1393, 2429, 2438 |
| BstNI | CCWGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| BstNSI | RCATGY | 1 cut(s) | 1284 |
| BstSCI | CCNGG | 4 cut(s) | 1441, 2177, 2242, 2389 |
| BstSFI | CTRYAG | 3 cut(s) | 797, 1925, 1951 |
| BstSLI | GKGCMC | 1 cut(s) | 1497 |
| BstUI | CGCG | 1 cut(s) | 142 |
| BstV1I | GCAGC | 1 cut(s) | 2597 |
| BstV2I | GAAGAC | 2 cut(s) | 485, 1589 |
| BstX2I | RGATCY | 3 cut(s) | 394, 535, 1867 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2563 |
| BstYI | RGATCY | 3 cut(s) | 394, 535, 1867 |
| BstZ17I | GTATAC | 1 cut(s) | 373 |
| Bsu15I | ATCGAT | 1 cut(s) | 2346 |
| BsuI | GTATCC | 1 cut(s) | 130 |
| BsuRI | GGCC | 8 cut(s) | 20, 159, 213, 786, 1349, 2218, 2258, 2646 |
| BsuTUI | ATCGAT | 1 cut(s) | 2346 |
| BtgI | CCRYGG | 1 cut(s) | 1769 |
| BtgZI | GCGATG | 1 cut(s) | 1261 |
| BtrI | CACGTC | 1 cut(s) | 2143 |
| BtsCI | GGATG | 7 cut(s) | 479, 1389, 2100, 2176, 2219, 2607, 2644 |
| BtsIMutI | CAGTG | 3 cut(s) | 1500, 1759, 2117 |
| BveI | ACCTGC | 1 cut(s) | 2339 |
| CciI | TCATGA | 2 cut(s) | 448, 870 |
| CfoI | GCGC | 2 cut(s) | 144, 242 |
| Cfr10I | RCCGGY | 1 cut(s) | 2000 |
| Cfr13I | GGNCC | 5 cut(s) | 18, 934, 1348, 2256, 2667 |
| ClaI | ATCGAT | 1 cut(s) | 2346 |
| CseI | GACGC | 1 cut(s) | 1247 |
| CspAI | ACCGGT | 1 cut(s) | 2000 |
| DraI | TTTAAA | 4 cut(s) | 250, 553, 606, 1831 |
| EaeI | YGGCCR | 1 cut(s) | 2216 |
| Eam1104I | CTCTTC | 7 cut(s) | 28, 46, 52, 79, 85, 612, 2207 |
| EarI | CTCTTC | 7 cut(s) | 28, 46, 52, 79, 85, 612, 2207 |
| Eco130I | CCWWGG | 2 cut(s) | 1721, 1769 |
| Eco147I | AGGCCT | 1 cut(s) | 786 |
| Eco24I | GRGCYC | 1 cut(s) | 1853 |
| Eco32I | GATATC | 2 cut(s) | 1761, 2584 |
| Eco47I | GGWCC | 2 cut(s) | 934, 2667 |
| Eco57I | CTGAAG | 2 cut(s) | 1128, 1386 |
| Eco72I | CACGTG | 1 cut(s) | 1170 |
| Eco88I | CYCGRG | 2 cut(s) | 1739, 2273 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1858 |
| EcoO109I | RGGNCCY | 3 cut(s) | 18, 1348, 2256 |
| EcoRII | CCWGG | 4 cut(s) | 1441, 2177, 2242, 2389 |
| EcoRV | GATATC | 2 cut(s) | 1761, 2584 |
| EcoT14I | CCWWGG | 2 cut(s) | 1721, 1769 |
| EcoT22I | ATGCAT | 3 cut(s) | 345, 1183, 1389 |
| EcoT38I | GRGCYC | 1 cut(s) | 1853 |
| ErhI | CCWWGG | 2 cut(s) | 1721, 1769 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1254, 1286, 1562, 1594 |
| FaqI | GGGAC | 1 cut(s) | 587 |
| FauI | CCCGC | 1 cut(s) | 2591 |
| FauNDI | CATATG | 1 cut(s) | 612 |
| FblI | GTMKAC | 1 cut(s) | 372 |
| Fnu4HI | GCNGC | 3 cut(s) | 2053, 2546, 2611 |
| FokI | GGATG | 7 cut(s) | 486, 1396, 2107, 2183, 2206, 2614, 2651 |
| FriOI | GRGCYC | 1 cut(s) | 1853 |
| Fsp4HI | GCNGC | 3 cut(s) | 2053, 2546, 2611 |
| FspBI | CTAG | 8 cut(s) | 824, 1121, 1244, 1397, 1722, 1865, 2289, 2435 |
| GlaI | GCGC | 2 cut(s) | 143, 241 |
| GluI | GCNGC | 3 cut(s) | 2053, 2546, 2611 |
| HaeIII | GGCC | 8 cut(s) | 20, 159, 213, 786, 1349, 2218, 2258, 2646 |
| HapII | CCGG | 3 cut(s) | 2001, 2168, 2318 |
| HgaI | GACGC | 1 cut(s) | 1247 |
| HhaI | GCGC | 2 cut(s) | 144, 242 |
| Hin6I | GCGC | 2 cut(s) | 142, 240 |
| HinP1I | GCGC | 2 cut(s) | 142, 240 |
| HincII | GTYRAC | 2 cut(s) | 1809, 2184 |
| HindII | GTYRAC | 2 cut(s) | 1809, 2184 |
| HindIII | AAGCTT | 1 cut(s) | 1576 |
| HpaI | GTTAAC | 1 cut(s) | 2184 |
| HpaII | CCGG | 3 cut(s) | 2001, 2168, 2318 |
| HphI | GGTGA | 5 cut(s) | 1079, 1631, 1758, 2164, 2320 |
| Hpy166II | GTNNAC | 8 cut(s) | 373, 1495, 1778, 1809, 2184, 2328, 2620, 2667 |
| Hpy8I | GTNNAC | 8 cut(s) | 373, 1495, 1778, 1809, 2184, 2328, 2620, 2667 |
| Hpy99I | CGWCG | 1 cut(s) | 2039 |
| HpyCH4III | ACNGT | 4 cut(s) | 1595, 2048, 2121, 2561 |
| HpyCH4IV | ACGT | 9 cut(s) | 645, 1074, 1150, 1169, 1450, 1485, 2142, 2339, 2622 |
| HpyCH4V | TGCA | 9 cut(s) | 166, 343, 698, 1181, 1194, 1387, 1495, 1918, 2117 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1393, 2429, 2438 |
| HpySE526I | ACGT | 9 cut(s) | 645, 1074, 1150, 1169, 1450, 1485, 2142, 2339, 2622 |
| HspAI | GCGC | 2 cut(s) | 142, 240 |
| Kpn2I | TCCGGA | 1 cut(s) | 2317 |
| KpnI | GGTACC | 1 cut(s) | 57 |
| KspAI | GTTAAC | 1 cut(s) | 2184 |
| LguI | GCTCTTC | 1 cut(s) | 612 |
| LmnI | GCTCC | 1 cut(s) | 2029 |
| Lsp1109I | GCAGC | 1 cut(s) | 2597 |
| LweI | GCATC | 5 cut(s) | 876, 1168, 1374, 1776, 2099 |
| MaeI | CTAG | 8 cut(s) | 824, 1121, 1244, 1397, 1722, 1865, 2289, 2435 |
| MaeII | ACGT | 9 cut(s) | 645, 1074, 1150, 1169, 1450, 1485, 2142, 2339, 2622 |
| MaeIII | GTNAC | 3 cut(s) | 556, 641, 1027 |
| MfeI | CAATTG | 2 cut(s) | 255, 693 |
| MflI | RGATCY | 3 cut(s) | 394, 535, 1867 |
| MhlI | GDGCHC | 4 cut(s) | 8, 1497, 1853, 2434 |
| MlyI | GAGTC | 9 cut(s) | 272, 605, 814, 1196, 1439, 1662, 2080, 2183, 2625 |
| MmeI | TCCRAC | 7 cut(s) | 568, 613, 934, 1959, 1994, 2273, 2580 |
| Mph1103I | ATGCAT | 3 cut(s) | 345, 1183, 1389 |
| MroI | TCCGGA | 1 cut(s) | 2317 |
| MroXI | GAANNNNTTC | 4 cut(s) | 505, 1113, 1266, 1577 |
| MslI | CAYNNNNRTG | 2 cut(s) | 348, 1768 |
| MspCI | CTTAAG | 1 cut(s) | 1781 |
| MspI | CCGG | 3 cut(s) | 2001, 2168, 2318 |
| MspR9I | CCNGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| MunI | CAATTG | 2 cut(s) | 255, 693 |
| MvaI | CCWGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| MvnI | CGCG | 1 cut(s) | 142 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1393, 2429, 2438 |
| NcoI | CCATGG | 1 cut(s) | 1769 |
| NdeI | CATATG | 1 cut(s) | 612 |
| NlaIV | GGNNCC | 2 cut(s) | 19, 55 |
| NmuCI | GTSAC | 1 cut(s) | 641 |
| NsiI | ATGCAT | 3 cut(s) | 345, 1183, 1389 |
| NspI | RCATGY | 1 cut(s) | 1284 |
| PaeR7I | CTCGAG | 1 cut(s) | 1739 |
| PagI | TCATGA | 2 cut(s) | 448, 870 |
| PaqCI | CACCTGC | 1 cut(s) | 2339 |
| PceI | AGGCCT | 1 cut(s) | 786 |
| PciSI | GCTCTTC | 1 cut(s) | 612 |
| PdmI | GAANNNNTTC | 4 cut(s) | 505, 1113, 1266, 1577 |
| PfeI | GAWTC | 5 cut(s) | 353, 1884, 1994, 2285, 2475 |
| Pfl23II | CGTACG | 1 cut(s) | 646 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2131 |
| PfoI | TCCNGGA | 2 cut(s) | 2242, 2389 |
| PinAI | ACCGGT | 1 cut(s) | 2000 |
| PkrI | GCNGC | 3 cut(s) | 2054, 2547, 2612 |
| PleI | GAGTC | 9 cut(s) | 271, 604, 814, 1195, 1438, 1662, 2080, 2182, 2624 |
| PmaCI | CACGTG | 1 cut(s) | 1170 |
| PmlI | CACGTG | 1 cut(s) | 1170 |
| PpsI | GAGTC | 9 cut(s) | 271, 604, 814, 1195, 1438, 1662, 2080, 2182, 2624 |
| Ppu21I | YACGTR | 4 cut(s) | 1151, 1170, 2340, 2623 |
| PshBI | ATTAAT | 1 cut(s) | 2484 |
| PsiI | TTATAA | 1 cut(s) | 711 |
| Psp6I | CCWGG | 4 cut(s) | 1441, 2177, 2242, 2389 |
| PspCI | CACGTG | 1 cut(s) | 1170 |
| PspGI | CCWGG | 4 cut(s) | 1441, 2177, 2242, 2389 |
| PspLI | CGTACG | 1 cut(s) | 646 |
| PspN4I | GGNNCC | 2 cut(s) | 19, 55 |
| PspPI | GGNCC | 5 cut(s) | 18, 934, 1348, 2256, 2667 |
| PsuI | RGATCY | 3 cut(s) | 394, 535, 1867 |
| RseI | CAYNNNNRTG | 2 cut(s) | 348, 1768 |
| SapI | GCTCTTC | 1 cut(s) | 612 |
| SatI | GCNGC | 3 cut(s) | 2053, 2546, 2611 |
| Sau96I | GGNCC | 5 cut(s) | 18, 934, 1348, 2256, 2667 |
| SchI | GAGTC | 9 cut(s) | 272, 605, 814, 1196, 1439, 1662, 2080, 2183, 2625 |
| ScrFI | CCNGG | 4 cut(s) | 1443, 2179, 2244, 2391 |
| SduI | GDGCHC | 4 cut(s) | 8, 1497, 1853, 2434 |
| SfaNI | GCATC | 5 cut(s) | 876, 1168, 1374, 1776, 2099 |
| SfcI | CTRYAG | 3 cut(s) | 797, 1925, 1951 |
| Sfr274I | CTCGAG | 1 cut(s) | 1739 |
| SinI | GGWCC | 2 cut(s) | 934, 2667 |
| SlaI | CTCGAG | 1 cut(s) | 1739 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 348, 1768 |
| SmlI | CTYRAG | 2 cut(s) | 1739, 1781 |
| SmoI | CTYRAG | 2 cut(s) | 1739, 1781 |
| SseBI | AGGCCT | 1 cut(s) | 786 |
| SsiI | CCGC | 4 cut(s) | 2053, 2546, 2598, 2613 |
| SspI | AATATT | 1 cut(s) | 1700 |
| SspMI | CTAG | 8 cut(s) | 824, 1121, 1244, 1397, 1722, 1865, 2289, 2435 |
| StuI | AGGCCT | 1 cut(s) | 786 |
| StyD4I | CCNGG | 4 cut(s) | 1441, 2177, 2242, 2389 |
| StyI | CCWWGG | 2 cut(s) | 1721, 1769 |
| TaaI | ACNGT | 4 cut(s) | 1595, 2048, 2121, 2561 |
| TaiI | ACGT | 9 cut(s) | 648, 1077, 1153, 1172, 1453, 1488, 2145, 2342, 2625 |
| TaqI | TCGA | 8 cut(s) | 356, 1253, 1629, 1740, 1997, 2037, 2346, 2508 |
| TaqII | GACCGA | 1 cut(s) | 2318 |
| TatI | WGTACW | 4 cut(s) | 1160, 1735, 1777, 2493 |
| TauI | GCSGC | 2 cut(s) | 2055, 2548 |
| TfiI | GAWTC | 5 cut(s) | 353, 1884, 1994, 2285, 2475 |
| TscAI | CASTG | 3 cut(s) | 1507, 1759, 2124 |
| TseFI | GTSAC | 1 cut(s) | 641 |
| TseI | GCWGC | 1 cut(s) | 2610 |
| Tsp45I | GTSAC | 1 cut(s) | 641 |
| TspDTI | ATGAA | 7 cut(s) | 190, 366, 873, 1131, 1271, 2111, 2655 |
| TspGWI | ACGGA | 2 cut(s) | 543, 2016 |
| TspRI | CASTG | 3 cut(s) | 1507, 1759, 2124 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2131 |
| Vha464I | CTTAAG | 1 cut(s) | 1781 |
| VneI | GTGCAC | 1 cut(s) | 1493 |
| VpaK11BI | GGWCC | 2 cut(s) | 934, 2667 |
| VspI | ATTAAT | 1 cut(s) | 2484 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1858 |
| XapI | RAATTY | 8 cut(s) | 270, 728, 1602, 1611, 2161, 2395, 2576, 2691 |
| XbaI | TCTAGA | 1 cut(s) | 2434 |
| XceI | RCATGY | 1 cut(s) | 1284 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2654 |
| XhoI | CTCGAG | 1 cut(s) | 1739 |
| XmaJI | CCTAGG | 1 cut(s) | 1721 |
| XmiI | GTMKAC | 1 cut(s) | 372 |
| XmnI | GAANNNNTTC | 4 cut(s) | 505, 1113, 1266, 1577 |
| XspI | CTAG | 8 cut(s) | 824, 1121, 1244, 1397, 1722, 1865, 2289, 2435 |
| Zsp2I | ATGCAT | 3 cut(s) | 345, 1183, 1389 |