TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 177 - 281 | 4e-14 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 253 - 351 | 2.3e-12 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 271 - 357 | 1.6e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 349 - 401 | 6.5e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 359 - 523 | 8.2e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 424 - 555 | 1.4e-10 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 438 - 493 | 2.3e-07 | Leucine rich repeat |
| C-JID | PF20160 | 571 - 625 | 1.7e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1938 |
| AatII | GACGTC | 1 cut(s) | 78 |
| AccB1I | GGYRCC | 1 cut(s) | 1476 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1750 |
| AccIII | TCCGGA | 2 cut(s) | 1679, 2043 |
| AciI | CCGC | 2 cut(s) | 1480, 1850 |
| AclWI | GGATC | 2 cut(s) | 1335, 1962 |
| AcoI | YGGCCR | 1 cut(s) | 1438 |
| AcsI | RAATTY | 2 cut(s) | 264, 1722 |
| AcuI | CTGAAG | 2 cut(s) | 1472, 1676 |
| AcyI | GRCGYC | 1 cut(s) | 75 |
| AfaI | GTAC | 4 cut(s) | 490, 591, 1627, 1736 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1750, 1855 |
| AflIII | ACRYGT | 2 cut(s) | 82, 339 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1555 |
| AjnI | CCWGG | 5 cut(s) | 21, 40, 511, 1711, 1780 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1173, 1205 |
| Alw21I | GWGCWC | 2 cut(s) | 147, 1880 |
| AlwI | GGATC | 2 cut(s) | 1335, 1962 |
| Aor13HI | TCCGGA | 2 cut(s) | 1679, 2043 |
| AoxI | GGCC | 4 cut(s) | 808, 877, 1438, 1887 |
| ApeKI | GCWGC | 1 cut(s) | 1530 |
| ApoI | RAATTY | 2 cut(s) | 264, 1722 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1249, 1281 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 246, 363, 747, 1461 |
| AspLEI | GCGC | 2 cut(s) | 51, 307 |
| AspS9I | GGNCC | 1 cut(s) | 276 |
| AsuC2I | CCSGG | 1 cut(s) | 280 |
| AsuHPI | GGTGA | 3 cut(s) | 175, 1203, 1733 |
| AvaII | GGWCC | 1 cut(s) | 276 |
| BanI | GGYRCC | 1 cut(s) | 1476 |
| BanII | GRGCYC | 1 cut(s) | 147 |
| BauI | CACGAG | 2 cut(s) | 569, 782 |
| BbsI | GAAGAC | 4 cut(s) | 239, 782, 995, 1995 |
| Bbv12I | GWGCWC | 2 cut(s) | 147, 1880 |
| BbvI | GCAGC | 1 cut(s) | 1542 |
| BccI | CCATC | 3 cut(s) | 1156, 1573, 1798 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 550, 584, 1266, 1300 |
| BciT130I | CCWGG | 5 cut(s) | 23, 42, 513, 1713, 1782 |
| BciVI | GTATCC | 1 cut(s) | 294 |
| BcnI | CCSGG | 1 cut(s) | 280 |
| BfaI | CTAG | 4 cut(s) | 329, 479, 1449, 1919 |
| BfmI | CTRYAG | 1 cut(s) | 1767 |
| BfuI | GTATCC | 1 cut(s) | 294 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 46 |
| BglII | AGATCT | 3 cut(s) | 778, 826, 1039 |
| BisI | GCNGC | 2 cut(s) | 1480, 1531 |
| BlsI | GCNGC | 2 cut(s) | 1481, 1532 |
| Bme1390I | CCNGG | 6 cut(s) | 23, 42, 280, 513, 1713, 1782 |
| Bme18I | GGWCC | 1 cut(s) | 276 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1555 |
| BmgT120I | GGNCC | 1 cut(s) | 276 |
| BmiI | GGNNCC | 2 cut(s) | 224, 1478 |
| BmrFI | CCNGG | 6 cut(s) | 23, 42, 280, 513, 1713, 1782 |
| BmrI | ACTGGG | 1 cut(s) | 1353 |
| BmsI | GCATC | 4 cut(s) | 1108, 1361, 1443, 1786 |
| BmuI | ACTGGG | 1 cut(s) | 1353 |
| BoxI | GACNNNNGTC | 1 cut(s) | 663 |
| BpiI | GAAGAC | 4 cut(s) | 239, 782, 995, 1995 |
| BpmI | CTGGAG | 1 cut(s) | 1734 |
| BpuEI | CTTGAG | 2 cut(s) | 54, 485 |
| BpuMI | CCSGG | 1 cut(s) | 280 |
| BsaAI | YACGTR | 1 cut(s) | 593 |
| BsaBI | GATNNNNATC | 3 cut(s) | 831, 1044, 2019 |
| BsaHI | GRCGYC | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 1 cut(s) | 511 |
| BsaWI | WCCGGW | 3 cut(s) | 652, 1679, 2043 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 141, 171, 507, 537 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1750, 1855 |
| Bse1I | ACTGG | 5 cut(s) | 106, 709, 1359, 1516, 1946 |
| Bse3DI | GCAATG | 2 cut(s) | 1493, 1637 |
| Bse8I | GATNNNNATC | 3 cut(s) | 831, 1044, 2019 |
| BseAI | TCCGGA | 2 cut(s) | 1679, 2043 |
| BseBI | CCWGG | 5 cut(s) | 23, 42, 513, 1713, 1782 |
| BseDI | CCNNGG | 1 cut(s) | 511 |
| BseGI | GGATG | 6 cut(s) | 661, 1148, 1202, 1376, 1777, 1809 |
| BseJI | GATNNNNATC | 3 cut(s) | 831, 1044, 2019 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1750, 1855 |
| BseMI | GCAATG | 2 cut(s) | 1493, 1637 |
| BseMII | CTCAG | 5 cut(s) | 132, 309, 424, 536, 1419 |
| BseNI | ACTGG | 5 cut(s) | 106, 709, 1359, 1516, 1946 |
| BseRI | GAGGAG | 2 cut(s) | 698, 884 |
| BseXI | GCAGC | 1 cut(s) | 1542 |
| BseYI | CCCAGC | 1 cut(s) | 301 |
| BshFI | GGCC | 4 cut(s) | 810, 879, 1440, 1889 |
| BshNI | GGYRCC | 1 cut(s) | 1476 |
| BsiHKAI | GWGCWC | 2 cut(s) | 147, 1880 |
| BsiSI | CCGG | 4 cut(s) | 279, 653, 1680, 2044 |
| BslFI | GGGAC | 2 cut(s) | 928, 1944 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1750, 1855 |
| BsmFI | GGGAC | 2 cut(s) | 928, 1944 |
| BsmI | GAATGC | 4 cut(s) | 172, 741, 1309, 1814 |
| BsnI | GGCC | 4 cut(s) | 810, 879, 1440, 1889 |
| Bsp1286I | GDGCHC | 2 cut(s) | 147, 1880 |
| Bsp13I | TCCGGA | 2 cut(s) | 1679, 2043 |
| Bsp1407I | TGTACA | 1 cut(s) | 488 |
| Bsp143I | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| BspACI | CCGC | 2 cut(s) | 1480, 1850 |
| BspANI | GGCC | 4 cut(s) | 810, 879, 1440, 1889 |
| BspCNI | CTCAG | 5 cut(s) | 133, 310, 423, 537, 1420 |
| BspEI | TCCGGA | 2 cut(s) | 1679, 2043 |
| BspLI | GGNNCC | 2 cut(s) | 224, 1478 |
| BspPI | GGATC | 2 cut(s) | 1335, 1962 |
| BspT107I | GGYRCC | 1 cut(s) | 1476 |
| BsrDI | GCAATG | 2 cut(s) | 1493, 1637 |
| BsrGI | TGTACA | 1 cut(s) | 488 |
| BsrI | ACTGG | 5 cut(s) | 106, 709, 1359, 1516, 1946 |
| BssECI | CCNNGG | 1 cut(s) | 511 |
| BssMI | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| BssNI | GRCGYC | 1 cut(s) | 75 |
| BssSI | CACGAG | 2 cut(s) | 569, 782 |
| Bst2BI | CACGAG | 2 cut(s) | 569, 782 |
| Bst2UI | CCWGG | 5 cut(s) | 23, 42, 513, 1713, 1782 |
| Bst4CI | ACNGT | 5 cut(s) | 403, 1209, 1592, 1768, 1935 |
| Bst6I | CTCTTC | 1 cut(s) | 891 |
| BstACI | GRCGYC | 1 cut(s) | 75 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1536 |
| BstAUI | TGTACA | 1 cut(s) | 488 |
| BstBAI | YACGTR | 1 cut(s) | 593 |
| BstC8I | GCNNGC | 4 cut(s) | 47, 583, 950, 1484 |
| BstDEI | CTNAG | 6 cut(s) | 141, 318, 410, 545, 1331, 1428 |
| BstEII | GGTNACC | 1 cut(s) | 1209 |
| BstF5I | GGATG | 6 cut(s) | 661, 1148, 1202, 1376, 1777, 1809 |
| BstHHI | GCGC | 2 cut(s) | 51, 307 |
| BstKTI | GATC | 5 cut(s) | 781, 829, 1042, 1330, 1957 |
| BstMBI | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 46, 351, 945, 1536 |
| BstNI | CCWGG | 5 cut(s) | 23, 42, 513, 1713, 1782 |
| BstNSI | RCATGY | 3 cut(s) | 86, 343, 952 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 663 |
| BstPI | GGTNACC | 1 cut(s) | 1209 |
| BstSCI | CCNGG | 6 cut(s) | 21, 40, 278, 511, 1711, 1780 |
| BstSFI | CTRYAG | 1 cut(s) | 1767 |
| BstV1I | GCAGC | 1 cut(s) | 1542 |
| BstV2I | GAAGAC | 4 cut(s) | 239, 782, 995, 1995 |
| BstX2I | RGATCY | 4 cut(s) | 778, 826, 1039, 1327 |
| BstYI | RGATCY | 4 cut(s) | 778, 826, 1039, 1327 |
| BsuI | GTATCC | 1 cut(s) | 294 |
| BsuRI | GGCC | 4 cut(s) | 810, 879, 1440, 1889 |
| BtsCI | GGATG | 6 cut(s) | 661, 1148, 1202, 1376, 1777, 1809 |
| BtsI | GCAGTG | 2 cut(s) | 592, 1018 |
| BtsIMutI | CAGTG | 7 cut(s) | 592, 702, 1018, 1366, 1880, 1940, 1953 |
| Cac8I | GCNNGC | 4 cut(s) | 47, 583, 950, 1484 |
| CfoI | GCGC | 2 cut(s) | 51, 307 |
| Cfr13I | GGNCC | 1 cut(s) | 276 |
| Csp6I | GTAC | 4 cut(s) | 489, 590, 1626, 1735 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 996, 1031 |
| CviAII | CATG | 7 cut(s) | 83, 340, 661, 692, 949, 1221, 1518 |
| CviQI | GTAC | 4 cut(s) | 489, 590, 1626, 1735 |
| DdeI | CTNAG | 6 cut(s) | 141, 318, 410, 545, 1331, 1428 |
| DpnI | GATC | 5 cut(s) | 780, 828, 1041, 1329, 1956 |
| DpnII | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1938 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1555 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1938 |
| EaeI | YGGCCR | 1 cut(s) | 1438 |
| Eam1104I | CTCTTC | 1 cut(s) | 891 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1555 |
| EarI | CTCTTC | 1 cut(s) | 891 |
| Ecl136II | GAGCTC | 1 cut(s) | 145 |
| Eco24I | GRGCYC | 1 cut(s) | 147 |
| Eco32I | GATATC | 1 cut(s) | 2017 |
| Eco47I | GGWCC | 1 cut(s) | 276 |
| Eco53kI | GAGCTC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 2 cut(s) | 1472, 1676 |
| Eco91I | GGTNACC | 1 cut(s) | 1209 |
| EcoICRI | GAGCTC | 1 cut(s) | 145 |
| EcoO65I | GGTNACC | 1 cut(s) | 1209 |
| EcoRI | GAATTC | 1 cut(s) | 264 |
| EcoRII | CCWGG | 5 cut(s) | 21, 40, 511, 1711, 1780 |
| EcoRV | GATATC | 1 cut(s) | 2017 |
| EcoT38I | GRGCYC | 1 cut(s) | 147 |
| FaeI | CATG | 7 cut(s) | 86, 343, 664, 695, 952, 1224, 1521 |
| FaqI | GGGAC | 2 cut(s) | 928, 1944 |
| FatI | CATG | 7 cut(s) | 82, 339, 660, 691, 948, 1220, 1517 |
| FauI | CCCGC | 1 cut(s) | 1857 |
| Fnu4HI | GCNGC | 2 cut(s) | 1480, 1531 |
| FokI | GGATG | 6 cut(s) | 668, 1135, 1209, 1383, 1764, 1816 |
| FriOI | GRGCYC | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 2 cut(s) | 1480, 1531 |
| FspBI | CTAG | 4 cut(s) | 329, 479, 1449, 1919 |
| GlaI | GCGC | 2 cut(s) | 50, 306 |
| GluI | GCNGC | 2 cut(s) | 1480, 1531 |
| GsaI | CCCAGC | 1 cut(s) | 305 |
| GsuI | CTGGAG | 1 cut(s) | 1734 |
| HaeIII | GGCC | 4 cut(s) | 810, 879, 1440, 1889 |
| HapII | CCGG | 4 cut(s) | 279, 653, 1680, 2044 |
| HhaI | GCGC | 2 cut(s) | 51, 307 |
| Hin1I | GRCGYC | 1 cut(s) | 75 |
| Hin1II | CATG | 7 cut(s) | 86, 343, 664, 695, 952, 1224, 1521 |
| Hin6I | GCGC | 2 cut(s) | 49, 305 |
| HinP1I | GCGC | 2 cut(s) | 49, 305 |
| HincII | GTYRAC | 5 cut(s) | 433, 508, 1386, 1588, 1943 |
| HindII | GTYRAC | 5 cut(s) | 433, 508, 1386, 1588, 1943 |
| HindIII | AAGCTT | 4 cut(s) | 638, 851, 1112, 1484 |
| HinfI | GANTC | 7 cut(s) | 26, 134, 424, 541, 565, 1809, 1991 |
| HpaI | GTTAAC | 2 cut(s) | 1386, 1588 |
| HpaII | CCGG | 4 cut(s) | 279, 653, 1680, 2044 |
| HphI | GGTGA | 3 cut(s) | 175, 1203, 1733 |
| Hpy166II | GTNNAC | 8 cut(s) | 260, 433, 508, 590, 1386, 1588, 1791, 1943 |
| Hpy188I | TCNGA | 6 cut(s) | 149, 546, 1035, 1351, 1491, 1954 |
| Hpy8I | GTNNAC | 8 cut(s) | 260, 433, 508, 590, 1386, 1588, 1791, 1943 |
| HpyAV | CCTTC | 6 cut(s) | 113, 443, 476, 732, 950, 1879 |
| HpyCH4III | ACNGT | 5 cut(s) | 403, 1209, 1592, 1768, 1935 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 592, 991, 1981 |
| HpyCH4V | TGCA | 9 cut(s) | 354, 561, 574, 581, 987, 1309, 1341, 1539, 1777 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 46, 351, 945, 1536 |
| HpyF3I | CTNAG | 6 cut(s) | 141, 318, 410, 545, 1331, 1428 |
| HpySE526I | ACGT | 4 cut(s) | 75, 592, 991, 1981 |
| Hsp92I | GRCGYC | 1 cut(s) | 75 |
| Hsp92II | CATG | 7 cut(s) | 86, 343, 664, 695, 952, 1224, 1521 |
| HspAI | GCGC | 2 cut(s) | 49, 305 |
| Kpn2I | TCCGGA | 2 cut(s) | 1679, 2043 |
| KspAI | GTTAAC | 2 cut(s) | 1386, 1588 |
| Kzo9I | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| LmnI | GCTCC | 2 cut(s) | 685, 1714 |
| Lsp1109I | GCAGC | 1 cut(s) | 1542 |
| LweI | GCATC | 4 cut(s) | 1108, 1361, 1443, 1786 |
| MaeI | CTAG | 4 cut(s) | 329, 479, 1449, 1919 |
| MaeII | ACGT | 4 cut(s) | 75, 592, 991, 1981 |
| MaeIII | GTNAC | 3 cut(s) | 1209, 1265, 1334 |
| MalI | GATC | 5 cut(s) | 780, 828, 1041, 1329, 1956 |
| MboI | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| MfeI | CAATTG | 1 cut(s) | 1534 |
| MflI | RGATCY | 4 cut(s) | 778, 826, 1039, 1327 |
| MhlI | GDGCHC | 2 cut(s) | 147, 1880 |
| MlyI | GAGTC | 2 cut(s) | 128, 1985 |
| MmeI | TCCRAC | 2 cut(s) | 1532, 1932 |
| MroI | TCCGGA | 2 cut(s) | 1679, 2043 |
| MroXI | GAANNNNTTC | 4 cut(s) | 246, 363, 747, 1461 |
| MslI | CAYNNNNRTG | 1 cut(s) | 696 |
| MspI | CCGG | 4 cut(s) | 279, 653, 1680, 2044 |
| MspR9I | CCNGG | 6 cut(s) | 23, 42, 280, 513, 1713, 1782 |
| MunI | CAATTG | 1 cut(s) | 1534 |
| Mva1269I | GAATGC | 4 cut(s) | 172, 741, 1309, 1814 |
| MvaI | CCWGG | 5 cut(s) | 23, 42, 513, 1713, 1782 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 46, 351, 945, 1536 |
| NciI | CCSGG | 1 cut(s) | 280 |
| NdeII | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| NlaIII | CATG | 7 cut(s) | 86, 343, 664, 695, 952, 1224, 1521 |
| NlaIV | GGNNCC | 2 cut(s) | 224, 1478 |
| NmuCI | GTSAC | 3 cut(s) | 1209, 1265, 1334 |
| NspI | RCATGY | 3 cut(s) | 86, 343, 952 |
| PaeI | GCATGC | 1 cut(s) | 952 |
| PciI | ACATGT | 2 cut(s) | 82, 339 |
| PctI | GAATGC | 4 cut(s) | 172, 741, 1309, 1814 |
| PdmI | GAANNNNTTC | 4 cut(s) | 246, 363, 747, 1461 |
| PfeI | GAWTC | 5 cut(s) | 26, 424, 541, 565, 1809 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1750 |
| PfoI | TCCNGGA | 1 cut(s) | 1711 |
| PkrI | GCNGC | 2 cut(s) | 1481, 1532 |
| PleI | GAGTC | 2 cut(s) | 128, 1985 |
| PpsI | GAGTC | 2 cut(s) | 128, 1985 |
| Ppu21I | YACGTR | 1 cut(s) | 593 |
| PscI | ACATGT | 2 cut(s) | 82, 339 |
| PshAI | GACNNNNGTC | 1 cut(s) | 663 |
| Psp124BI | GAGCTC | 1 cut(s) | 147 |
| Psp6I | CCWGG | 5 cut(s) | 21, 40, 511, 1711, 1780 |
| PspEI | GGTNACC | 1 cut(s) | 1209 |
| PspFI | CCCAGC | 1 cut(s) | 301 |
| PspGI | CCWGG | 5 cut(s) | 21, 40, 511, 1711, 1780 |
| PspN4I | GGNNCC | 2 cut(s) | 224, 1478 |
| PspPI | GGNCC | 1 cut(s) | 276 |
| PsuI | RGATCY | 4 cut(s) | 778, 826, 1039, 1327 |
| RsaI | GTAC | 4 cut(s) | 490, 591, 1627, 1736 |
| RsaNI | GTAC | 4 cut(s) | 489, 590, 1626, 1735 |
| RseI | CAYNNNNRTG | 1 cut(s) | 696 |
| SacI | GAGCTC | 1 cut(s) | 147 |
| SatI | GCNGC | 2 cut(s) | 1480, 1531 |
| Sau3AI | GATC | 5 cut(s) | 778, 826, 1039, 1327, 1954 |
| Sau96I | GGNCC | 1 cut(s) | 276 |
| SchI | GAGTC | 2 cut(s) | 128, 1985 |
| ScrFI | CCNGG | 6 cut(s) | 23, 42, 280, 513, 1713, 1782 |
| SduI | GDGCHC | 2 cut(s) | 147, 1880 |
| SfaNI | GCATC | 4 cut(s) | 1108, 1361, 1443, 1786 |
| SfcI | CTRYAG | 1 cut(s) | 1767 |
| SinI | GGWCC | 1 cut(s) | 276 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 696 |
| SmlI | CTYRAG | 2 cut(s) | 69, 464 |
| SmoI | CTYRAG | 2 cut(s) | 69, 464 |
| SphI | GCATGC | 1 cut(s) | 952 |
| SsiI | CCGC | 2 cut(s) | 1480, 1850 |
| SspMI | CTAG | 4 cut(s) | 329, 479, 1449, 1919 |
| SstI | GAGCTC | 1 cut(s) | 147 |
| StyD4I | CCNGG | 6 cut(s) | 21, 40, 278, 511, 1711, 1780 |
| TaaI | ACNGT | 5 cut(s) | 403, 1209, 1592, 1768, 1935 |
| TaiI | ACGT | 4 cut(s) | 78, 595, 994, 1984 |
| TaqI | TCGA | 2 cut(s) | 182, 290 |
| TatI | WGTACW | 2 cut(s) | 488, 1625 |
| TauI | GCSGC | 1 cut(s) | 1482 |
| TfiI | GAWTC | 5 cut(s) | 26, 424, 541, 565, 1809 |
| TscAI | CASTG | 7 cut(s) | 592, 709, 1018, 1366, 1880, 1940, 1953 |
| TseFI | GTSAC | 3 cut(s) | 1209, 1265, 1334 |
| TseI | GCWGC | 1 cut(s) | 1530 |
| Tsp45I | GTSAC | 3 cut(s) | 1209, 1265, 1334 |
| TspDTI | ATGAA | 9 cut(s) | 203, 680, 1302, 1506, 1533, 1626, 1626, 1734, 2001 |
| TspGWI | ACGGA | 1 cut(s) | 1908 |
| TspRI | CASTG | 7 cut(s) | 592, 709, 1018, 1366, 1880, 1940, 1953 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1750 |
| VpaK11BI | GGWCC | 1 cut(s) | 276 |
| XapI | RAATTY | 2 cut(s) | 264, 1722 |
| XbaI | TCTAGA | 2 cut(s) | 478, 1448 |
| XceI | RCATGY | 3 cut(s) | 86, 343, 952 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1515 |
| XmnI | GAANNNNTTC | 4 cut(s) | 246, 363, 747, 1461 |
| XspI | CTAG | 4 cut(s) | 329, 479, 1449, 1919 |
| ZraI | GACGTC | 1 cut(s) | 76 |