TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 98 |
| AciI | CCGC | 1 cut(s) | 98 |
| AclWI | GGATC | 2 cut(s) | 359, 372 |
| AcoI | YGGCCR | 1 cut(s) | 344 |
| AcsI | RAATTY | 4 cut(s) | 240, 265, 428, 487 |
| AfaI | GTAC | 1 cut(s) | 13 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 282 |
| AgsI | TTSAA | 2 cut(s) | 146, 433 |
| AhlI | ACTAGT | 1 cut(s) | 8 |
| AjnI | CCWGG | 1 cut(s) | 493 |
| AluBI | AGCT | 2 cut(s) | 170, 224 |
| AluI | AGCT | 2 cut(s) | 170, 224 |
| AlwI | GGATC | 2 cut(s) | 359, 372 |
| AoxI | GGCC | 1 cut(s) | 344 |
| ApeKI | GCWGC | 1 cut(s) | 482 |
| ApoI | RAATTY | 4 cut(s) | 240, 265, 428, 487 |
| AspLEI | GCGC | 1 cut(s) | 98 |
| AsuHPI | GGTGA | 2 cut(s) | 314, 413 |
| BalI | TGGCCA | 1 cut(s) | 346 |
| BamHI | GGATCC | 1 cut(s) | 364 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| BbvCI | CCTCAGC | 1 cut(s) | 455 |
| BbvI | GCAGC | 1 cut(s) | 494 |
| BciT130I | CCWGG | 1 cut(s) | 495 |
| BciVI | GTATCC | 1 cut(s) | 94 |
| BcuI | ACTAGT | 1 cut(s) | 8 |
| BfaI | CTAG | 2 cut(s) | 9, 167 |
| BfuI | GTATCC | 1 cut(s) | 94 |
| BisI | GCNGC | 1 cut(s) | 483 |
| BlsI | GCNGC | 1 cut(s) | 484 |
| BmcAI | AGTACT | 1 cut(s) | 13 |
| Bme1390I | CCNGG | 1 cut(s) | 495 |
| BmiI | GGNNCC | 1 cut(s) | 366 |
| BmrFI | CCNGG | 1 cut(s) | 495 |
| BmsI | GCATC | 2 cut(s) | 201, 469 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| Bpu10I | CCTNAGC | 1 cut(s) | 455 |
| BsaJI | CCNNGG | 2 cut(s) | 276, 494 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 282 |
| Bse3DI | GCAATG | 3 cut(s) | 115, 203, 320 |
| BseBI | CCWGG | 1 cut(s) | 495 |
| BseDI | CCNNGG | 2 cut(s) | 276, 494 |
| BseGI | GGATG | 3 cut(s) | 298, 379, 442 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 282 |
| BseMI | GCAATG | 3 cut(s) | 115, 203, 320 |
| BseMII | CTCAG | 1 cut(s) | 446 |
| BseRI | GAGGAG | 2 cut(s) | 25, 204 |
| BseXI | GCAGC | 1 cut(s) | 494 |
| Bsh1236I | CGCG | 1 cut(s) | 98 |
| BshFI | GGCC | 1 cut(s) | 346 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 282 |
| BsnI | GGCC | 1 cut(s) | 346 |
| Bsp143I | GATC | 2 cut(s) | 306, 364 |
| BspACI | CCGC | 1 cut(s) | 98 |
| BspANI | GGCC | 1 cut(s) | 346 |
| BspCNI | CTCAG | 1 cut(s) | 447 |
| BspFNI | CGCG | 1 cut(s) | 98 |
| BspLI | GGNNCC | 1 cut(s) | 366 |
| BspPI | GGATC | 2 cut(s) | 359, 372 |
| BsrDI | GCAATG | 3 cut(s) | 115, 203, 320 |
| BssECI | CCNNGG | 2 cut(s) | 276, 494 |
| BssMI | GATC | 2 cut(s) | 306, 364 |
| Bst2UI | CCWGG | 1 cut(s) | 495 |
| Bst6I | CTCTTC | 2 cut(s) | 34, 43 |
| BstDEI | CTNAG | 1 cut(s) | 455 |
| BstF5I | GGATG | 3 cut(s) | 298, 379, 442 |
| BstFNI | CGCG | 1 cut(s) | 98 |
| BstHHI | GCGC | 1 cut(s) | 98 |
| BstKTI | GATC | 2 cut(s) | 309, 367 |
| BstMBI | GATC | 2 cut(s) | 306, 364 |
| BstNI | CCWGG | 1 cut(s) | 495 |
| BstSCI | CCNGG | 1 cut(s) | 493 |
| BstUI | CGCG | 1 cut(s) | 98 |
| BstV1I | GCAGC | 1 cut(s) | 494 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BstX2I | RGATCY | 1 cut(s) | 364 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 227 |
| BstYI | RGATCY | 1 cut(s) | 364 |
| BsuI | GTATCC | 1 cut(s) | 94 |
| BsuRI | GGCC | 1 cut(s) | 346 |
| BtsCI | GGATG | 3 cut(s) | 298, 379, 442 |
| CfoI | GCGC | 1 cut(s) | 98 |
| CseI | GACGC | 1 cut(s) | 261 |
| Csp6I | GTAC | 1 cut(s) | 12 |
| CviAII | CATG | 4 cut(s) | 63, 310, 419, 442 |
| CviJI | RGCY | 5 cut(s) | 26, 170, 224, 346, 470 |
| CviKI_1 | RGCY | 5 cut(s) | 26, 170, 224, 346, 470 |
| CviQI | GTAC | 1 cut(s) | 12 |
| DdeI | CTNAG | 1 cut(s) | 455 |
| DpnI | GATC | 2 cut(s) | 308, 366 |
| DpnII | GATC | 2 cut(s) | 306, 364 |
| EaeI | YGGCCR | 1 cut(s) | 344 |
| Eam1104I | CTCTTC | 2 cut(s) | 34, 43 |
| EarI | CTCTTC | 2 cut(s) | 34, 43 |
| EcoRII | CCWGG | 1 cut(s) | 493 |
| FaeI | CATG | 4 cut(s) | 66, 313, 422, 445 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 13, 45 |
| FatI | CATG | 4 cut(s) | 62, 309, 418, 441 |
| Fnu4HI | GCNGC | 1 cut(s) | 483 |
| FokI | GGATG | 3 cut(s) | 305, 386, 449 |
| Fsp4HI | GCNGC | 1 cut(s) | 483 |
| FspBI | CTAG | 2 cut(s) | 9, 167 |
| GlaI | GCGC | 1 cut(s) | 97 |
| GluI | GCNGC | 1 cut(s) | 483 |
| HaeIII | GGCC | 1 cut(s) | 346 |
| HgaI | GACGC | 1 cut(s) | 261 |
| HhaI | GCGC | 1 cut(s) | 98 |
| Hin1II | CATG | 4 cut(s) | 66, 313, 422, 445 |
| Hin6I | GCGC | 1 cut(s) | 96 |
| HinP1I | GCGC | 1 cut(s) | 96 |
| HincII | GTYRAC | 1 cut(s) | 415 |
| HindII | GTYRAC | 1 cut(s) | 415 |
| HinfI | GANTC | 5 cut(s) | 153, 233, 323, 331, 422 |
| HpaI | GTTAAC | 1 cut(s) | 415 |
| HphI | GGTGA | 2 cut(s) | 314, 413 |
| Hpy166II | GTNNAC | 1 cut(s) | 415 |
| Hpy188I | TCNGA | 2 cut(s) | 262, 280 |
| Hpy188III | TCNNGA | 1 cut(s) | 237 |
| Hpy8I | GTNNAC | 1 cut(s) | 415 |
| HpyAV | CCTTC | 1 cut(s) | 442 |
| HpyCH4V | TGCA | 3 cut(s) | 130, 313, 482 |
| HpyF3I | CTNAG | 1 cut(s) | 455 |
| Hsp92II | CATG | 4 cut(s) | 66, 313, 422, 445 |
| HspAI | GCGC | 1 cut(s) | 96 |
| KspAI | GTTAAC | 1 cut(s) | 415 |
| Kzo9I | GATC | 2 cut(s) | 306, 364 |
| LpnPI | CCDG | 5 cut(s) | 250, 398, 480, 493, 507 |
| Lsp1109I | GCAGC | 1 cut(s) | 494 |
| LweI | GCATC | 2 cut(s) | 201, 469 |
| MaeI | CTAG | 2 cut(s) | 9, 167 |
| MalI | GATC | 2 cut(s) | 308, 366 |
| MboI | GATC | 2 cut(s) | 306, 364 |
| MboII | GAAGA | 3 cut(s) | 16, 21, 30 |
| MflI | RGATCY | 1 cut(s) | 364 |
| MlsI | TGGCCA | 1 cut(s) | 346 |
| MluCI | AATT | 7 cut(s) | 136, 240, 265, 336, 348, 428, 487 |
| MluNI | TGGCCA | 1 cut(s) | 346 |
| MlyI | GAGTC | 1 cut(s) | 242 |
| Mox20I | TGGCCA | 1 cut(s) | 346 |
| MscI | TGGCCA | 1 cut(s) | 346 |
| MseI | TTAA | 2 cut(s) | 20, 414 |
| Msp20I | TGGCCA | 1 cut(s) | 346 |
| MspR9I | CCNGG | 1 cut(s) | 495 |
| MvaI | CCWGG | 1 cut(s) | 495 |
| MvnI | CGCG | 1 cut(s) | 98 |
| NdeII | GATC | 2 cut(s) | 306, 364 |
| NlaIII | CATG | 4 cut(s) | 66, 313, 422, 445 |
| NlaIV | GGNNCC | 1 cut(s) | 366 |
| PfeI | GAWTC | 4 cut(s) | 153, 323, 331, 422 |
| PkrI | GCNGC | 1 cut(s) | 484 |
| PleI | GAGTC | 1 cut(s) | 241 |
| PpsI | GAGTC | 1 cut(s) | 241 |
| Psp6I | CCWGG | 1 cut(s) | 493 |
| PspGI | CCWGG | 1 cut(s) | 493 |
| PspN4I | GGNNCC | 1 cut(s) | 366 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 457, 489 |
| PsuI | RGATCY | 1 cut(s) | 364 |
| RsaI | GTAC | 1 cut(s) | 13 |
| RsaNI | GTAC | 1 cut(s) | 12 |
| SaqAI | TTAA | 2 cut(s) | 20, 414 |
| SatI | GCNGC | 1 cut(s) | 483 |
| Sau3AI | GATC | 2 cut(s) | 306, 364 |
| ScaI | AGTACT | 1 cut(s) | 13 |
| SchI | GAGTC | 1 cut(s) | 242 |
| ScrFI | CCNGG | 1 cut(s) | 495 |
| SetI | ASST | 8 cut(s) | 164, 172, 180, 226, 363, 394, 453, 461 |
| SfaNI | GCATC | 2 cut(s) | 201, 469 |
| SpeI | ACTAGT | 1 cut(s) | 8 |
| Sse9I | AATT | 7 cut(s) | 136, 240, 265, 336, 348, 428, 487 |
| SsiI | CCGC | 1 cut(s) | 98 |
| SspMI | CTAG | 2 cut(s) | 9, 167 |
| StyD4I | CCNGG | 1 cut(s) | 493 |
| TaqI | TCGA | 1 cut(s) | 16 |
| TasI | AATT | 7 cut(s) | 136, 240, 265, 336, 348, 428, 487 |
| TatI | WGTACW | 1 cut(s) | 11 |
| TfiI | GAWTC | 4 cut(s) | 153, 323, 331, 422 |
| Tru1I | TTAA | 2 cut(s) | 20, 414 |
| Tru9I | TTAA | 2 cut(s) | 20, 414 |
| TseI | GCWGC | 1 cut(s) | 482 |
| TspDTI | ATGAA | 4 cut(s) | 17, 51, 309, 435 |
| XapI | RAATTY | 4 cut(s) | 240, 265, 428, 487 |
| XspI | CTAG | 2 cut(s) | 9, 167 |
| ZrmI | AGTACT | 1 cut(s) | 13 |