TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 191 | 2.7e-55 | TIR domain |
| TIR_2 | PF13676 | 25 - 122 | 1.3e-15 | TIR domain |
| NB-ARC | PF00931 | 219 - 376 | 2.4e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 444 - 516 | 2.2e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 665 - 778 | 1.8e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 701 - 784 | 6.2e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1010, 1269 |
| AatII | GACGTC | 1 cut(s) | 3123 |
| AccI | GTMKAC | 2 cut(s) | 1231, 1547 |
| AccII | CGCG | 2 cut(s) | 2567, 3223 |
| AciI | CCGC | 7 cut(s) | 507, 1420, 1774, 1799, 1816, 2295, 3013 |
| AclI | AACGTT | 1 cut(s) | 784 |
| AclWI | GGATC | 9 cut(s) | 158, 235, 353, 366, 1983, 2016, 2029, 2094, 2103 |
| AcoI | YGGCCR | 2 cut(s) | 3, 338 |
| AcuI | CTGAAG | 2 cut(s) | 1653, 2400 |
| AcyI | GRCGYC | 1 cut(s) | 3120 |
| AfaI | GTAC | 3 cut(s) | 639, 666, 1165 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 276, 800, 2018, 2368, 2588, 3401 |
| AflIII | ACRYGT | 2 cut(s) | 2410, 3257 |
| AjnI | CCWGG | 4 cut(s) | 1200, 1971, 2080, 2526 |
| Alw21I | GWGCWC | 4 cut(s) | 420, 979, 1101, 2892 |
| Alw26I | GTCTC | 1 cut(s) | 2830 |
| Alw44I | GTGCAC | 1 cut(s) | 2888 |
| AlwI | GGATC | 9 cut(s) | 158, 235, 353, 366, 1983, 2016, 2029, 2094, 2103 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2489 |
| Ama87I | CYCGRG | 2 cut(s) | 502, 2477 |
| AoxI | GGCC | 4 cut(s) | 3, 338, 1065, 1186 |
| ApaLI | GTGCAC | 1 cut(s) | 2888 |
| ApeKI | GCWGC | 4 cut(s) | 476, 1863, 2679, 3193 |
| AseI | ATTAAT | 1 cut(s) | 2115 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 207, 294 |
| AspLEI | GCGC | 1 cut(s) | 2506 |
| AspS9I | GGNCC | 1 cut(s) | 952 |
| AsuC2I | CCSGG | 2 cut(s) | 503, 504 |
| AsuHPI | GGTGA | 4 cut(s) | 1571, 2000, 3176, 3373 |
| AsuII | TTCGAA | 1 cut(s) | 2765 |
| AsuNHI | GCTAGC | 1 cut(s) | 2386 |
| AvaI | CYCGRG | 2 cut(s) | 502, 2477 |
| AvaII | GGWCC | 1 cut(s) | 952 |
| BaeGI | GKGCMC | 2 cut(s) | 2345, 2892 |
| BalI | TGGCCA | 2 cut(s) | 5, 340 |
| BamHI | GGATCC | 2 cut(s) | 358, 2021 |
| BanII | GRGCYC | 2 cut(s) | 1101, 2478 |
| BauI | CACGAG | 1 cut(s) | 618 |
| BbsI | GAAGAC | 2 cut(s) | 710, 3351 |
| Bbv12I | GWGCWC | 4 cut(s) | 420, 979, 1101, 2892 |
| BbvI | GCAGC | 4 cut(s) | 488, 1850, 2666, 3180 |
| BccI | CCATC | 9 cut(s) | 14, 447, 1256, 1313, 1505, 1513, 2809, 2854, 3395 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1753, 1787, 2671, 2705, 3020, 3054 |
| BciT130I | CCWGG | 4 cut(s) | 1202, 1973, 2082, 2528 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BcnI | CCSGG | 2 cut(s) | 503, 504 |
| BcoDI | GTCTC | 1 cut(s) | 2830 |
| BfaI | CTAG | 7 cut(s) | 806, 1002, 1076, 1406, 1511, 2387, 3439 |
| BfmI | CTRYAG | 4 cut(s) | 1530, 1656, 2585, 2680 |
| BfoI | RGCGCY | 1 cut(s) | 2507 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BglII | AGATCT | 1 cut(s) | 2284 |
| BisI | GCNGC | 5 cut(s) | 477, 1864, 2296, 2680, 3194 |
| BlsI | GCNGC | 5 cut(s) | 478, 1865, 2297, 2681, 3195 |
| BmcAI | AGTACT | 1 cut(s) | 1165 |
| Bme1390I | CCNGG | 6 cut(s) | 503, 504, 1202, 1973, 2082, 2528 |
| Bme18I | GGWCC | 1 cut(s) | 952 |
| BmeT110I | CYCGRG | 2 cut(s) | 502, 2477 |
| BmgT120I | GGNCC | 1 cut(s) | 952 |
| BmiI | GGNNCC | 4 cut(s) | 360, 2023, 2475, 2970 |
| BmrFI | CCNGG | 6 cut(s) | 503, 504, 1202, 1973, 2082, 2528 |
| BmtI | GCTAGC | 1 cut(s) | 2390 |
| BpiI | GAAGAC | 2 cut(s) | 710, 3351 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 448, 480 |
| BpmI | CTGGAG | 3 cut(s) | 2116, 2159, 2854 |
| Bpu14I | TTCGAA | 1 cut(s) | 2765 |
| BpuEI | CTTGAG | 1 cut(s) | 1167 |
| BpuMI | CCSGG | 2 cut(s) | 503, 504 |
| BsaAI | YACGTR | 1 cut(s) | 3258 |
| BsaBI | GATNNNNATC | 2 cut(s) | 174, 1758 |
| BsaHI | GRCGYC | 1 cut(s) | 3120 |
| BsaJI | CCNNGG | 5 cut(s) | 304, 363, 502, 2714, 3287 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2827, 2857 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 276, 800, 2018, 2368, 2588, 3401 |
| Bse118I | RCCGGY | 1 cut(s) | 2724 |
| Bse1I | ACTGG | 7 cut(s) | 297, 602, 955, 2099, 2206, 2951, 3384 |
| Bse3DI | GCAATG | 4 cut(s) | 1356, 2213, 3152, 3242 |
| Bse8I | GATNNNNATC | 2 cut(s) | 174, 1758 |
| BseBI | CCWGG | 4 cut(s) | 1202, 1973, 2082, 2528 |
| BseDI | CCNNGG | 5 cut(s) | 304, 363, 502, 2714, 3287 |
| BseJI | GATNNNNATC | 2 cut(s) | 174, 1758 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 276, 800, 2018, 2368, 2588, 3401 |
| BseMI | GCAATG | 4 cut(s) | 1356, 2213, 3152, 3242 |
| BseMII | CTCAG | 2 cut(s) | 71, 2936 |
| BseNI | ACTGG | 7 cut(s) | 297, 602, 955, 2099, 2206, 2951, 3384 |
| BseRI | GAGGAG | 1 cut(s) | 201 |
| BseSI | GKGCMC | 2 cut(s) | 2345, 2892 |
| BseXI | GCAGC | 4 cut(s) | 488, 1850, 2666, 3180 |
| BsgI | GTGCAG | 4 cut(s) | 543, 2113, 3179, 3390 |
| Bsh1236I | CGCG | 2 cut(s) | 2567, 3223 |
| BshFI | GGCC | 4 cut(s) | 5, 340, 1067, 1188 |
| BsiHKAI | GWGCWC | 4 cut(s) | 420, 979, 1101, 2892 |
| BsiHKCI | CYCGRG | 2 cut(s) | 502, 2477 |
| BsiSI | CCGG | 3 cut(s) | 503, 972, 2725 |
| BslFI | GGGAC | 4 cut(s) | 2554, 2604, 2676, 3068 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 276, 800, 2018, 2368, 2588, 3401 |
| BsmAI | GTCTC | 1 cut(s) | 2830 |
| BsmFI | GGGAC | 4 cut(s) | 2554, 2604, 2676, 3068 |
| BsmI | GAATGC | 2 cut(s) | 2063, 2636 |
| BsnI | GGCC | 4 cut(s) | 5, 340, 1067, 1188 |
| BsoBI | CYCGRG | 2 cut(s) | 502, 2477 |
| Bsp119I | TTCGAA | 1 cut(s) | 2765 |
| Bsp1286I | GDGCHC | 6 cut(s) | 420, 979, 1101, 2345, 2478, 2892 |
| Bsp68I | TCGCGA | 1 cut(s) | 3223 |
| BspACI | CCGC | 7 cut(s) | 507, 1420, 1774, 1799, 1816, 2295, 3013 |
| BspANI | GGCC | 4 cut(s) | 5, 340, 1067, 1188 |
| BspCNI | CTCAG | 2 cut(s) | 72, 2935 |
| BspFNI | CGCG | 2 cut(s) | 2567, 3223 |
| BspLI | GGNNCC | 4 cut(s) | 360, 2023, 2475, 2970 |
| BspMAI | CTGCAG | 1 cut(s) | 2684 |
| BspOI | GCTAGC | 1 cut(s) | 2390 |
| BspPI | GGATC | 9 cut(s) | 158, 235, 353, 366, 1983, 2016, 2029, 2094, 2103 |
| BspQI | GCTCTTC | 1 cut(s) | 1106 |
| BspT104I | TTCGAA | 1 cut(s) | 2765 |
| BsrDI | GCAATG | 4 cut(s) | 1356, 2213, 3152, 3242 |
| BsrFI | RCCGGY | 1 cut(s) | 2724 |
| BsrI | ACTGG | 7 cut(s) | 297, 602, 955, 2099, 2206, 2951, 3384 |
| BssAI | RCCGGY | 1 cut(s) | 2724 |
| BssECI | CCNNGG | 5 cut(s) | 304, 363, 502, 2714, 3287 |
| BssNI | GRCGYC | 1 cut(s) | 3120 |
| BssSI | CACGAG | 1 cut(s) | 618 |
| BssT1I | CCWWGG | 3 cut(s) | 304, 2714, 3287 |
| Bst2BI | CACGAG | 1 cut(s) | 618 |
| Bst2UI | CCWGG | 4 cut(s) | 1202, 1973, 2082, 2528 |
| Bst4CI | ACNGT | 7 cut(s) | 1046, 1168, 1336, 1737, 1796, 2253, 2420 |
| Bst6I | CTCTTC | 4 cut(s) | 40, 1106, 1509, 2906 |
| BstACI | GRCGYC | 1 cut(s) | 3120 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 631 |
| BstBAI | YACGTR | 1 cut(s) | 3258 |
| BstBI | TTCGAA | 1 cut(s) | 2765 |
| BstC8I | GCNNGC | 4 cut(s) | 509, 1251, 2388, 2892 |
| BstDEI | CTNAG | 8 cut(s) | 80, 643, 842, 1156, 1963, 1979, 2922, 3160 |
| BstFNI | CGCG | 2 cut(s) | 2567, 3223 |
| BstH2I | RGCGCY | 1 cut(s) | 2507 |
| BstHHI | GCGC | 1 cut(s) | 2506 |
| BstMAI | GTCTC | 1 cut(s) | 2830 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 631, 1561, 3244 |
| BstNI | CCWGG | 4 cut(s) | 1202, 1973, 2082, 2528 |
| BstNSI | RCATGY | 2 cut(s) | 634, 2414 |
| BstSCI | CCNGG | 6 cut(s) | 501, 502, 1200, 1971, 2080, 2526 |
| BstSFI | CTRYAG | 4 cut(s) | 1530, 1656, 2585, 2680 |
| BstSLI | GKGCMC | 2 cut(s) | 2345, 2892 |
| BstUI | CGCG | 2 cut(s) | 2567, 3223 |
| BstV1I | GCAGC | 4 cut(s) | 488, 1850, 2666, 3180 |
| BstV2I | GAAGAC | 2 cut(s) | 710, 3351 |
| BstX2I | RGATCY | 5 cut(s) | 358, 1975, 2021, 2099, 2284 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2534 |
| BstYI | RGATCY | 5 cut(s) | 358, 1975, 2021, 2099, 2284 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 4 cut(s) | 5, 340, 1067, 1188 |
| BtsIMutI | CAGTG | 4 cut(s) | 1341, 2199, 2487, 3391 |
| BtuMI | TCGCGA | 1 cut(s) | 3223 |
| Cac8I | GCNNGC | 4 cut(s) | 509, 1251, 2388, 2892 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2489 |
| CfoI | GCGC | 1 cut(s) | 2506 |
| Cfr10I | RCCGGY | 1 cut(s) | 2724 |
| Cfr13I | GGNCC | 1 cut(s) | 952 |
| Cfr9I | CCCGGG | 1 cut(s) | 502 |
| CseI | GACGC | 2 cut(s) | 2556, 3227 |
| Csp6I | GTAC | 3 cut(s) | 638, 665, 1164 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2352, 2387 |
| CviQI | GTAC | 3 cut(s) | 638, 665, 1164 |
| DdeI | CTNAG | 8 cut(s) | 80, 643, 842, 1156, 1963, 1979, 2922, 3160 |
| DraI | TTTAAA | 1 cut(s) | 1998 |
| EaeI | YGGCCR | 2 cut(s) | 3, 338 |
| Eam1104I | CTCTTC | 4 cut(s) | 40, 1106, 1509, 2906 |
| EarI | CTCTTC | 4 cut(s) | 40, 1106, 1509, 2906 |
| Ecl136II | GAGCTC | 1 cut(s) | 1099 |
| Eco130I | CCWWGG | 3 cut(s) | 304, 2714, 3287 |
| Eco147I | AGGCCT | 1 cut(s) | 1188 |
| Eco24I | GRGCYC | 2 cut(s) | 1101, 2478 |
| Eco32I | GATATC | 1 cut(s) | 2234 |
| Eco47I | GGWCC | 1 cut(s) | 952 |
| Eco53kI | GAGCTC | 1 cut(s) | 1099 |
| Eco57I | CTGAAG | 2 cut(s) | 1653, 2400 |
| Eco88I | CYCGRG | 2 cut(s) | 502, 2477 |
| EcoICRI | GAGCTC | 1 cut(s) | 1099 |
| EcoRI | GAATTC | 1 cut(s) | 2492 |
| EcoRII | CCWGG | 4 cut(s) | 1200, 1971, 2080, 2526 |
| EcoRV | GATATC | 1 cut(s) | 2234 |
| EcoT14I | CCWWGG | 3 cut(s) | 304, 2714, 3287 |
| EcoT22I | ATGCAT | 3 cut(s) | 268, 967, 2636 |
| EcoT38I | GRGCYC | 2 cut(s) | 1101, 2478 |
| ErhI | CCWWGG | 3 cut(s) | 304, 2714, 3287 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 618, 650 |
| FaqI | GGGAC | 4 cut(s) | 2554, 2604, 2676, 3068 |
| FauI | CCCGC | 2 cut(s) | 500, 1823 |
| FblI | GTMKAC | 2 cut(s) | 1231, 1547 |
| Fnu4HI | GCNGC | 5 cut(s) | 477, 1864, 2296, 2680, 3194 |
| FriOI | GRGCYC | 2 cut(s) | 1101, 2478 |
| Fsp4HI | GCNGC | 5 cut(s) | 477, 1864, 2296, 2680, 3194 |
| FspBI | CTAG | 7 cut(s) | 806, 1002, 1076, 1406, 1511, 2387, 3439 |
| GlaI | GCGC | 1 cut(s) | 2505 |
| GluI | GCNGC | 5 cut(s) | 477, 1864, 2296, 2680, 3194 |
| GsuI | CTGGAG | 3 cut(s) | 2116, 2159, 2854 |
| HaeII | RGCGCY | 1 cut(s) | 2507 |
| HaeIII | GGCC | 4 cut(s) | 5, 340, 1067, 1188 |
| HapII | CCGG | 3 cut(s) | 503, 972, 2725 |
| HgaI | GACGC | 2 cut(s) | 2556, 3227 |
| HhaI | GCGC | 1 cut(s) | 2506 |
| Hin1I | GRCGYC | 1 cut(s) | 3120 |
| Hin6I | GCGC | 1 cut(s) | 2504 |
| HinP1I | GCGC | 1 cut(s) | 2504 |
| HincII | GTYRAC | 4 cut(s) | 2041, 2092, 2416, 2653 |
| HindII | GTYRAC | 4 cut(s) | 2041, 2092, 2416, 2653 |
| HindIII | AAGCTT | 2 cut(s) | 1553, 2033 |
| HpaII | CCGG | 3 cut(s) | 503, 972, 2725 |
| HphI | GGTGA | 4 cut(s) | 1571, 2000, 3176, 3373 |
| HpyCH4III | ACNGT | 7 cut(s) | 1046, 1168, 1336, 1737, 1796, 2253, 2420 |
| HpyCH4IV | ACGT | 6 cut(s) | 369, 784, 1873, 3120, 3257, 3348 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 631, 1561, 3244 |
| HpyF3I | CTNAG | 8 cut(s) | 80, 643, 842, 1156, 1963, 1979, 2922, 3160 |
| HpySE526I | ACGT | 6 cut(s) | 369, 784, 1873, 3120, 3257, 3348 |
| Hsp92I | GRCGYC | 1 cut(s) | 3120 |
| HspAI | GCGC | 1 cut(s) | 2504 |
| LguI | GCTCTTC | 1 cut(s) | 1106 |
| LmnI | GCTCC | 3 cut(s) | 974, 2473, 2785 |
| Lsp1109I | GCAGC | 4 cut(s) | 488, 1850, 2666, 3180 |
| MaeI | CTAG | 7 cut(s) | 806, 1002, 1076, 1406, 1511, 2387, 3439 |
| MaeII | ACGT | 6 cut(s) | 369, 784, 1873, 3120, 3257, 3348 |
| MaeIII | GTNAC | 5 cut(s) | 1415, 1776, 1790, 2420, 3148 |
| MfeI | CAATTG | 2 cut(s) | 11, 711 |
| MflI | RGATCY | 5 cut(s) | 358, 1975, 2021, 2099, 2284 |
| MhlI | GDGCHC | 6 cut(s) | 420, 979, 1101, 2345, 2478, 2892 |
| MlsI | TGGCCA | 2 cut(s) | 5, 340 |
| MluNI | TGGCCA | 2 cut(s) | 5, 340 |
| MlyI | GAGTC | 7 cut(s) | 1553, 2384, 2417, 2658, 2832, 2904, 3273 |
| MmeI | TCCRAC | 1 cut(s) | 1999 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 340 |
| Mph1103I | ATGCAT | 3 cut(s) | 268, 967, 2636 |
| MroXI | GAANNNNTTC | 2 cut(s) | 207, 294 |
| MscI | TGGCCA | 2 cut(s) | 5, 340 |
| MslI | CAYNNNNRTG | 5 cut(s) | 516, 1222, 1224, 1587, 3135 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 340 |
| MspA1I | CMGCKG | 1 cut(s) | 2985 |
| MspI | CCGG | 3 cut(s) | 503, 972, 2725 |
| MspR9I | CCNGG | 6 cut(s) | 503, 504, 1202, 1973, 2082, 2528 |
| MunI | CAATTG | 2 cut(s) | 11, 711 |
| Mva1269I | GAATGC | 2 cut(s) | 2063, 2636 |
| MvaI | CCWGG | 4 cut(s) | 1202, 1973, 2082, 2528 |
| MvnI | CGCG | 2 cut(s) | 2567, 3223 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 631, 1561, 3244 |
| NciI | CCSGG | 2 cut(s) | 503, 504 |
| NheI | GCTAGC | 1 cut(s) | 2386 |
| NlaIV | GGNNCC | 4 cut(s) | 360, 2023, 2475, 2970 |
| NmeAIII | GCCGAG | 1 cut(s) | 1516 |
| NmuCI | GTSAC | 3 cut(s) | 1415, 1790, 2420 |
| NruI | TCGCGA | 1 cut(s) | 3223 |
| NsiI | ATGCAT | 3 cut(s) | 268, 967, 2636 |
| NspI | RCATGY | 2 cut(s) | 634, 2414 |
| NspV | TTCGAA | 1 cut(s) | 2765 |
| PceI | AGGCCT | 1 cut(s) | 1188 |
| PciI | ACATGT | 1 cut(s) | 2410 |
| PciSI | GCTCTTC | 1 cut(s) | 1106 |
| PctI | GAATGC | 2 cut(s) | 2063, 2636 |
| PdmI | GAANNNNTTC | 2 cut(s) | 207, 294 |
| PflFI | GACNNNGTC | 1 cut(s) | 2841 |
| PfoI | TCCNGGA | 1 cut(s) | 1971 |
| PkrI | GCNGC | 5 cut(s) | 478, 1865, 2297, 2681, 3195 |
| PleI | GAGTC | 7 cut(s) | 1552, 2383, 2417, 2658, 2832, 2904, 3272 |
| PpsI | GAGTC | 7 cut(s) | 1552, 2383, 2417, 2658, 2832, 2904, 3272 |
| Ppu21I | YACGTR | 1 cut(s) | 3258 |
| PscI | ACATGT | 1 cut(s) | 2410 |
| PshBI | ATTAAT | 1 cut(s) | 2115 |
| PsiI | TTATAA | 2 cut(s) | 1010, 1269 |
| Psp124BI | GAGCTC | 1 cut(s) | 1101 |
| Psp1406I | AACGTT | 1 cut(s) | 784 |
| Psp6I | CCWGG | 4 cut(s) | 1200, 1971, 2080, 2526 |
| PspGI | CCWGG | 4 cut(s) | 1200, 1971, 2080, 2526 |
| PspN4I | GGNNCC | 4 cut(s) | 360, 2023, 2475, 2970 |
| PspPI | GGNCC | 1 cut(s) | 952 |
| PstI | CTGCAG | 1 cut(s) | 2684 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2489 |
| PsuI | RGATCY | 5 cut(s) | 358, 1975, 2021, 2099, 2284 |
| PsyI | GACNNNGTC | 1 cut(s) | 2841 |
| PvuII | CAGCTG | 1 cut(s) | 2985 |
| RruI | TCGCGA | 1 cut(s) | 3223 |
| RsaI | GTAC | 3 cut(s) | 639, 666, 1165 |
| RsaNI | GTAC | 3 cut(s) | 638, 665, 1164 |
| RseI | CAYNNNNRTG | 5 cut(s) | 516, 1222, 1224, 1587, 3135 |
| SacI | GAGCTC | 1 cut(s) | 1101 |
| SapI | GCTCTTC | 1 cut(s) | 1106 |
| SatI | GCNGC | 5 cut(s) | 477, 1864, 2296, 2680, 3194 |
| Sau96I | GGNCC | 1 cut(s) | 952 |
| ScaI | AGTACT | 1 cut(s) | 1165 |
| SchI | GAGTC | 7 cut(s) | 1553, 2384, 2417, 2658, 2832, 2904, 3273 |
| ScrFI | CCNGG | 6 cut(s) | 503, 504, 1202, 1973, 2082, 2528 |
| SduI | GDGCHC | 6 cut(s) | 420, 979, 1101, 2345, 2478, 2892 |
| SfcI | CTRYAG | 4 cut(s) | 1530, 1656, 2585, 2680 |
| SfuI | TTCGAA | 1 cut(s) | 2765 |
| SinI | GGWCC | 1 cut(s) | 952 |
| SmaI | CCCGGG | 1 cut(s) | 504 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 516, 1222, 1224, 1587, 3135 |
| SmlI | CTYRAG | 1 cut(s) | 1182 |
| SmoI | CTYRAG | 1 cut(s) | 1182 |
| SseBI | AGGCCT | 1 cut(s) | 1188 |
| SsiI | CCGC | 7 cut(s) | 507, 1420, 1774, 1799, 1816, 2295, 3013 |
| SspI | AATATT | 2 cut(s) | 1178, 2554 |
| SspMI | CTAG | 7 cut(s) | 806, 1002, 1076, 1406, 1511, 2387, 3439 |
| SstI | GAGCTC | 1 cut(s) | 1101 |
| StuI | AGGCCT | 1 cut(s) | 1188 |
| StyD4I | CCNGG | 6 cut(s) | 501, 502, 1200, 1971, 2080, 2526 |
| StyI | CCWWGG | 3 cut(s) | 304, 2714, 3287 |
| TaaI | ACNGT | 7 cut(s) | 1046, 1168, 1336, 1737, 1796, 2253, 2420 |
| TaiI | ACGT | 6 cut(s) | 372, 787, 1876, 3123, 3260, 3351 |
| TaqI | TCGA | 9 cut(s) | 1353, 1452, 1878, 2121, 2432, 2765, 2908, 3030, 3262 |
| TatI | WGTACW | 2 cut(s) | 637, 1163 |
| TauI | GCSGC | 1 cut(s) | 2298 |
| TscAI | CASTG | 4 cut(s) | 1341, 2206, 2494, 3391 |
| TseFI | GTSAC | 3 cut(s) | 1415, 1790, 2420 |
| TseI | GCWGC | 4 cut(s) | 476, 1863, 2679, 3193 |
| Tsp45I | GTSAC | 3 cut(s) | 1415, 1790, 2420 |
| TspGWI | ACGGA | 5 cut(s) | 1182, 2461, 3101, 3356, 3411 |
| TspMI | CCCGGG | 1 cut(s) | 502 |
| TspRI | CASTG | 4 cut(s) | 1341, 2206, 2494, 3391 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2841 |
| VneI | GTGCAC | 1 cut(s) | 2888 |
| VpaK11BI | GGWCC | 1 cut(s) | 952 |
| VspI | ATTAAT | 1 cut(s) | 2115 |
| XceI | RCATGY | 2 cut(s) | 634, 2414 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3186 |
| XmaI | CCCGGG | 1 cut(s) | 502 |
| XmiI | GTMKAC | 2 cut(s) | 1231, 1547 |
| XmnI | GAANNNNTTC | 2 cut(s) | 207, 294 |
| XspI | CTAG | 7 cut(s) | 806, 1002, 1076, 1406, 1511, 2387, 3439 |
| ZraI | GACGTC | 1 cut(s) | 3121 |
| ZrmI | AGTACT | 1 cut(s) | 1165 |
| Zsp2I | ATGCAT | 3 cut(s) | 268, 967, 2636 |