TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 177 | 3e-56 | TIR domain |
| TIR_2 | PF13676 | 15 - 110 | 7.4e-16 | TIR domain |
| NB-ARC | PF00931 | 196 - 364 | 1.7e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 432 - 499 | 1.4e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 672 - 787 | 7.9e-14 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 784 - 829 | 7e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 821 - 901 | 9.8e-16 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 867 - 925 | 1.7e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 913 - 971 | 6.4e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 939 - 1021 | 9.4e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 968 - 1039 | 1.1e-09 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1431 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3510 |
| Acc36I | ACCTGC | 1 cut(s) | 1512 |
| AccB1I | GGYRCC | 1 cut(s) | 3120 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1042, 2738 |
| AccII | CGCG | 2 cut(s) | 2288, 3320 |
| AccIII | TCCGGA | 1 cut(s) | 1904 |
| AciI | CCGC | 7 cut(s) | 443, 654, 2157, 2827, 3068, 3744, 3821 |
| AclI | AACGTT | 1 cut(s) | 1924 |
| AclWI | GGATC | 7 cut(s) | 262, 320, 589, 1053, 1290, 1938, 3837 |
| AcoI | YGGCCR | 2 cut(s) | 555, 828 |
| AcuI | CTGAAG | 7 cut(s) | 783, 2054, 2061, 2372, 2648, 2964, 3750 |
| AcvI | CACGTG | 2 cut(s) | 1348, 3869 |
| AcyI | GRCGYC | 1 cut(s) | 2743 |
| AdeI | CACNNNGTG | 1 cut(s) | 1291 |
| AfaI | GTAC | 3 cut(s) | 563, 1639, 1734 |
| AfeI | AGCGCT | 2 cut(s) | 103, 3157 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 243, 1042, 1106, 2651, 2738, 3130, 3255, 3330 |
| AflII | CTTAAG | 2 cut(s) | 1630, 2024 |
| AflIII | ACRYGT | 4 cut(s) | 1345, 2286, 2907, 3797 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3319 |
| AjiI | CACGTC | 1 cut(s) | 2908 |
| AjnI | CCWGG | 3 cut(s) | 1507, 3229, 3574 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 233, 265, 3009, 3041 |
| AleI | CACNNNNGTG | 1 cut(s) | 3566 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3513, 3545 |
| Alw21I | GWGCWC | 2 cut(s) | 1401, 2118 |
| Alw26I | GTCTC | 5 cut(s) | 1897, 2753, 3169, 3295, 3518 |
| Alw44I | GTGCAC | 1 cut(s) | 2114 |
| AlwI | GGATC | 7 cut(s) | 262, 320, 589, 1053, 1290, 1938, 3837 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3293 |
| Ama87I | CYCGRG | 3 cut(s) | 1061, 1146, 3517 |
| Aor13HI | TCCGGA | 1 cut(s) | 1904 |
| Aor51HI | AGCGCT | 2 cut(s) | 103, 3157 |
| AoxI | GGCC | 8 cut(s) | 88, 555, 828, 1150, 1410, 1742, 3479, 3558 |
| ApaLI | GTGCAC | 1 cut(s) | 2114 |
| ApeKI | GCWGC | 8 cut(s) | 99, 428, 1217, 1239, 1374, 1600, 2491, 3088 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3273, 3305 |
| AseI | ATTAAT | 3 cut(s) | 1022, 1392, 3723 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 738, 1082, 1302, 3183 |
| AspA2I | CCTAGG | 1 cut(s) | 3626 |
| AspLEI | GCGC | 3 cut(s) | 104, 3158, 3320 |
| AspS9I | GGNCC | 5 cut(s) | 1033, 1097, 1411, 3558, 3901 |
| AsuC2I | CCSGG | 3 cut(s) | 3518, 3519, 4057 |
| AsuII | TTCGAA | 1 cut(s) | 393 |
| AsuNHI | GCTAGC | 2 cut(s) | 3817, 3986 |
| AvaI | CYCGRG | 3 cut(s) | 1061, 1146, 3517 |
| AvaII | GGWCC | 3 cut(s) | 1033, 1097, 3901 |
| AvrII | CCTAGG | 1 cut(s) | 3626 |
| BaeGI | GKGCMC | 3 cut(s) | 2118, 3125, 4189 |
| BalI | TGGCCA | 2 cut(s) | 557, 830 |
| BanI | GGYRCC | 1 cut(s) | 3120 |
| BauI | CACGAG | 1 cut(s) | 582 |
| BbrPI | CACGTG | 2 cut(s) | 1348, 3869 |
| BbsI | GAAGAC | 3 cut(s) | 3359, 3756, 4140 |
| Bbv12I | GWGCWC | 2 cut(s) | 1401, 2118 |
| BbvI | GCAGC | 8 cut(s) | 111, 440, 1204, 1251, 1386, 1612, 2503, 3075 |
| BceAI | ACGGC | 1 cut(s) | 3484 |
| BciT130I | CCWGG | 3 cut(s) | 1509, 3231, 3576 |
| BciVI | GTATCC | 2 cut(s) | 61, 1823 |
| BclI | TGATCA | 8 cut(s) | 6, 139, 855, 916, 3223, 3615, 3934, 4072 |
| BcnI | CCSGG | 3 cut(s) | 3518, 3519, 4057 |
| BcoDI | GTCTC | 5 cut(s) | 1897, 2753, 3169, 3295, 3518 |
| BfaI | CTAG | 8 cut(s) | 840, 1175, 2019, 3098, 3627, 3818, 3987, 4064 |
| BfmI | CTRYAG | 3 cut(s) | 943, 2489, 4023 |
| BfoI | RGCGCY | 2 cut(s) | 105, 3159 |
| BfrI | CTTAAG | 2 cut(s) | 1630, 2024 |
| BfuAI | ACCTGC | 1 cut(s) | 1512 |
| BfuI | GTATCC | 2 cut(s) | 61, 1823 |
| BlnI | CCTAGG | 1 cut(s) | 3626 |
| Bme1390I | CCNGG | 6 cut(s) | 1509, 3231, 3518, 3519, 3576, 4057 |
| Bme18I | GGWCC | 3 cut(s) | 1033, 1097, 3901 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3319 |
| BmeT110I | CYCGRG | 3 cut(s) | 1061, 1146, 3517 |
| BmgBI | CACGTC | 1 cut(s) | 2908 |
| BmgT120I | GGNCC | 5 cut(s) | 1033, 1097, 1411, 3558, 3901 |
| BmiI | GGNNCC | 5 cut(s) | 3122, 3235, 3559, 3902, 4107 |
| BmrFI | CCNGG | 6 cut(s) | 1509, 3231, 3518, 3519, 3576, 4057 |
| BmrI | ACTGGG | 1 cut(s) | 560 |
| BmtI | GCTAGC | 2 cut(s) | 3821, 3990 |
| BmuI | ACTGGG | 1 cut(s) | 560 |
| BpiI | GAAGAC | 3 cut(s) | 3359, 3756, 4140 |
| BpmI | CTGGAG | 1 cut(s) | 1719 |
| Bpu14I | TTCGAA | 1 cut(s) | 393 |
| BpuEI | CTTGAG | 3 cut(s) | 293, 1747, 2114 |
| BpuMI | CCSGG | 3 cut(s) | 3518, 3519, 4057 |
| Bsa29I | ATCGAT | 1 cut(s) | 2252 |
| BsaAI | YACGTR | 2 cut(s) | 1348, 3869 |
| BsaBI | GATNNNNATC | 5 cut(s) | 206, 915, 2659, 3933, 4074 |
| BsaHI | GRCGYC | 1 cut(s) | 2743 |
| BsaI | GGTCTC | 1 cut(s) | 3169 |
| BsaWI | WCCGGW | 1 cut(s) | 1904 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3867, 3897 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 243, 1042, 1106, 2651, 2738, 3130, 3255, 3330 |
| Bse1I | ACTGG | 4 cut(s) | 308, 489, 566, 3135 |
| Bse3DI | GCAATG | 4 cut(s) | 1214, 3443, 3988, 4173 |
| Bse8I | GATNNNNATC | 5 cut(s) | 206, 915, 2659, 3933, 4074 |
| BseAI | TCCGGA | 1 cut(s) | 1904 |
| BseBI | CCWGG | 3 cut(s) | 1509, 3231, 3576 |
| BseCI | ATCGAT | 1 cut(s) | 2252 |
| BseJI | GATNNNNATC | 5 cut(s) | 206, 915, 2659, 3933, 4074 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 243, 1042, 1106, 2651, 2738, 3130, 3255, 3330 |
| BseMI | GCAATG | 4 cut(s) | 1214, 3443, 3988, 4173 |
| BseMII | CTCAG | 4 cut(s) | 41, 483, 3582, 4172 |
| BseNI | ACTGG | 4 cut(s) | 308, 489, 566, 3135 |
| BseRI | GAGGAG | 1 cut(s) | 168 |
| BseSI | GKGCMC | 3 cut(s) | 2118, 3125, 4189 |
| BseXI | GCAGC | 8 cut(s) | 111, 440, 1204, 1251, 1386, 1612, 2503, 3075 |
| BsgI | GTGCAG | 3 cut(s) | 118, 1619, 3195 |
| Bsh1236I | CGCG | 2 cut(s) | 2288, 3320 |
| BshFI | GGCC | 8 cut(s) | 90, 557, 830, 1152, 1412, 1744, 3481, 3560 |
| BshNI | GGYRCC | 1 cut(s) | 3120 |
| BshVI | ATCGAT | 1 cut(s) | 2252 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1401, 2118 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1061, 1146, 3517 |
| BsiSI | CCGG | 4 cut(s) | 1905, 3371, 3518, 4056 |
| BslFI | GGGAC | 1 cut(s) | 2283 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 243, 1042, 1106, 2651, 2738, 3130, 3255, 3330 |
| BsmAI | GTCTC | 5 cut(s) | 1897, 2753, 3169, 3295, 3518 |
| BsmFI | GGGAC | 1 cut(s) | 2283 |
| BsmI | GAATGC | 3 cut(s) | 389, 1084, 2173 |
| BsnI | GGCC | 8 cut(s) | 90, 557, 830, 1152, 1412, 1744, 3481, 3560 |
| Bso31I | GGTCTC | 1 cut(s) | 3169 |
| BsoBI | CYCGRG | 3 cut(s) | 1061, 1146, 3517 |
| Bsp119I | TTCGAA | 1 cut(s) | 393 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1401, 2118, 3125, 4189 |
| Bsp13I | TCCGGA | 1 cut(s) | 1904 |
| Bsp19I | CCATGG | 1 cut(s) | 29 |
| BspACI | CCGC | 7 cut(s) | 443, 654, 2157, 2827, 3068, 3744, 3821 |
| BspANI | GGCC | 8 cut(s) | 90, 557, 830, 1152, 1412, 1744, 3481, 3560 |
| BspCNI | CTCAG | 4 cut(s) | 42, 482, 3583, 4173 |
| BspDI | ATCGAT | 1 cut(s) | 2252 |
| BspEI | TCCGGA | 1 cut(s) | 1904 |
| BspFNI | CGCG | 2 cut(s) | 2288, 3320 |
| BspHI | TCATGA | 6 cut(s) | 379, 1051, 1534, 3772, 3832, 4078 |
| BspLI | GGNNCC | 5 cut(s) | 3122, 3235, 3559, 3902, 4107 |
| BspMAI | CTGCAG | 1 cut(s) | 2493 |
| BspMI | ACCTGC | 1 cut(s) | 1512 |
| BspOI | GCTAGC | 2 cut(s) | 3821, 3990 |
| BspPI | GGATC | 7 cut(s) | 262, 320, 589, 1053, 1290, 1938, 3837 |
| BspT104I | TTCGAA | 1 cut(s) | 393 |
| BspT107I | GGYRCC | 1 cut(s) | 3120 |
| BspTI | CTTAAG | 2 cut(s) | 1630, 2024 |
| BspTNI | GGTCTC | 1 cut(s) | 3169 |
| BsrDI | GCAATG | 4 cut(s) | 1214, 3443, 3988, 4173 |
| BsrI | ACTGG | 4 cut(s) | 308, 489, 566, 3135 |
| BssNI | GRCGYC | 1 cut(s) | 2743 |
| BssSI | CACGAG | 1 cut(s) | 582 |
| BssT1I | CCWWGG | 8 cut(s) | 29, 1578, 2271, 2409, 2547, 2685, 2754, 3626 |
| Bst2BI | CACGAG | 1 cut(s) | 582 |
| Bst2UI | CCWGG | 3 cut(s) | 1509, 3231, 3576 |
| Bst6I | CTCTTC | 5 cut(s) | 186, 507, 2410, 2548, 3189 |
| BstACI | GRCGYC | 1 cut(s) | 2743 |
| BstAFI | CTTAAG | 2 cut(s) | 1630, 2024 |
| BstBAI | YACGTR | 2 cut(s) | 1348, 3869 |
| BstBI | TTCGAA | 1 cut(s) | 393 |
| BstC8I | GCNNGC | 4 cut(s) | 3154, 3376, 3819, 3988 |
| BstDEI | CTNAG | 9 cut(s) | 50, 469, 889, 931, 1664, 1934, 3056, 3591, 4181 |
| BstDSI | CCRYGG | 1 cut(s) | 29 |
| BstFNI | CGCG | 2 cut(s) | 2288, 3320 |
| BstH2I | RGCGCY | 2 cut(s) | 105, 3159 |
| BstHHI | GCGC | 3 cut(s) | 104, 3158, 3320 |
| BstMAI | GTCTC | 5 cut(s) | 1897, 2753, 3169, 3295, 3518 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 96, 836, 3259, 3454, 3987 |
| BstNI | CCWGG | 3 cut(s) | 1509, 3231, 3576 |
| BstNSI | RCATGY | 5 cut(s) | 1320, 1388, 1657, 3378, 3801 |
| BstSCI | CCNGG | 6 cut(s) | 1507, 3229, 3516, 3517, 3574, 4055 |
| BstSFI | CTRYAG | 3 cut(s) | 943, 2489, 4023 |
| BstSLI | GKGCMC | 3 cut(s) | 2118, 3125, 4189 |
| BstUI | CGCG | 2 cut(s) | 2288, 3320 |
| BstV1I | GCAGC | 8 cut(s) | 111, 440, 1204, 1251, 1386, 1612, 2503, 3075 |
| BstV2I | GAAGAC | 3 cut(s) | 3359, 3756, 4140 |
| BstX2I | RGATCY | 3 cut(s) | 267, 594, 1930 |
| BstYI | RGATCY | 3 cut(s) | 267, 594, 1930 |
| Bsu15I | ATCGAT | 1 cut(s) | 2252 |
| BsuI | GTATCC | 2 cut(s) | 61, 1823 |
| BsuRI | GGCC | 8 cut(s) | 90, 557, 830, 1152, 1412, 1744, 3481, 3560 |
| BsuTUI | ATCGAT | 1 cut(s) | 2252 |
| BtgI | CCRYGG | 1 cut(s) | 29 |
| BtgZI | GCGATG | 1 cut(s) | 1297 |
| BtrI | CACGTC | 1 cut(s) | 2908 |
| BtsIMutI | CAGTG | 3 cut(s) | 496, 3079, 3239 |
| BveI | ACCTGC | 1 cut(s) | 1512 |
| Cac8I | GCNNGC | 4 cut(s) | 3154, 3376, 3819, 3988 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3293 |
| CciI | TCATGA | 6 cut(s) | 379, 1051, 1534, 3772, 3832, 4078 |
| CfoI | GCGC | 3 cut(s) | 104, 3158, 3320 |
| Cfr13I | GGNCC | 5 cut(s) | 1033, 1097, 1411, 3558, 3901 |
| Cfr9I | CCCGGG | 1 cut(s) | 3517 |
| ClaI | ATCGAT | 1 cut(s) | 2252 |
| CseI | GACGC | 9 cut(s) | 98, 1698, 2074, 2277, 2294, 2570, 2732, 2984, 3309 |
| Csp6I | GTAC | 3 cut(s) | 562, 1638, 1733 |
| CviQI | GTAC | 3 cut(s) | 562, 1638, 1733 |
| DdeI | CTNAG | 9 cut(s) | 50, 469, 889, 931, 1664, 1934, 3056, 3591, 4181 |
| DraI | TTTAAA | 3 cut(s) | 1327, 3033, 3271 |
| DraIII | CACNNNGTG | 1 cut(s) | 1291 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3510 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3319 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3510 |
| EaeI | YGGCCR | 2 cut(s) | 555, 828 |
| Eam1104I | CTCTTC | 5 cut(s) | 186, 507, 2410, 2548, 3189 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3319 |
| EarI | CTCTTC | 5 cut(s) | 186, 507, 2410, 2548, 3189 |
| Eco130I | CCWWGG | 8 cut(s) | 29, 1578, 2271, 2409, 2547, 2685, 2754, 3626 |
| Eco147I | AGGCCT | 1 cut(s) | 1152 |
| Eco31I | GGTCTC | 1 cut(s) | 3169 |
| Eco47I | GGWCC | 3 cut(s) | 1033, 1097, 3901 |
| Eco47III | AGCGCT | 2 cut(s) | 103, 3157 |
| Eco57I | CTGAAG | 7 cut(s) | 783, 2054, 2061, 2372, 2648, 2964, 3750 |
| Eco72I | CACGTG | 2 cut(s) | 1348, 3869 |
| Eco88I | CYCGRG | 3 cut(s) | 1061, 1146, 3517 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1411 |
| EcoRII | CCWGG | 3 cut(s) | 1507, 3229, 3574 |
| EcoT14I | CCWWGG | 8 cut(s) | 29, 1578, 2271, 2409, 2547, 2685, 2754, 3626 |
| EcoT22I | ATGCAT | 4 cut(s) | 235, 1452, 2428, 3380 |
| ErhI | CCWWGG | 8 cut(s) | 29, 1578, 2271, 2409, 2547, 2685, 2754, 3626 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 233, 265, 1290, 1322, 3432, 3464 |
| FaqI | GGGAC | 1 cut(s) | 2283 |
| FauI | CCCGC | 1 cut(s) | 2820 |
| FauNDI | CATATG | 1 cut(s) | 2566 |
| FbaI | TGATCA | 8 cut(s) | 6, 139, 855, 916, 3223, 3615, 3934, 4072 |
| FspBI | CTAG | 8 cut(s) | 840, 1175, 2019, 3098, 3627, 3818, 3987, 4064 |
| GlaI | GCGC | 3 cut(s) | 103, 3157, 3319 |
| GsuI | CTGGAG | 1 cut(s) | 1719 |
| HaeII | RGCGCY | 2 cut(s) | 105, 3159 |
| HaeIII | GGCC | 8 cut(s) | 90, 557, 830, 1152, 1412, 1744, 3481, 3560 |
| HapII | CCGG | 4 cut(s) | 1905, 3371, 3518, 4056 |
| HgaI | GACGC | 9 cut(s) | 98, 1698, 2074, 2277, 2294, 2570, 2732, 2984, 3309 |
| HhaI | GCGC | 3 cut(s) | 104, 3158, 3320 |
| Hin1I | GRCGYC | 1 cut(s) | 2743 |
| Hin6I | GCGC | 3 cut(s) | 102, 3156, 3318 |
| HinP1I | GCGC | 3 cut(s) | 102, 3156, 3318 |
| HincII | GTYRAC | 1 cut(s) | 1002 |
| HindII | GTYRAC | 1 cut(s) | 1002 |
| HindIII | AAGCTT | 4 cut(s) | 1299, 1365, 2205, 2882 |
| HpaII | CCGG | 4 cut(s) | 1905, 3371, 3518, 4056 |
| Hpy166II | GTNNAC | 8 cut(s) | 1002, 1486, 1546, 2116, 3079, 3324, 3487, 3904 |
| Hpy8I | GTNNAC | 8 cut(s) | 1002, 1486, 1546, 2116, 3079, 3324, 3487, 3904 |
| HpyCH4IV | ACGT | 7 cut(s) | 1129, 1347, 1924, 2188, 2198, 2907, 3868 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 96, 836, 3259, 3454, 3987 |
| HpyF3I | CTNAG | 9 cut(s) | 50, 469, 889, 931, 1664, 1934, 3056, 3591, 4181 |
| HpySE526I | ACGT | 7 cut(s) | 1129, 1347, 1924, 2188, 2198, 2907, 3868 |
| Hsp92I | GRCGYC | 1 cut(s) | 2743 |
| HspAI | GCGC | 3 cut(s) | 102, 3156, 3318 |
| Kpn2I | TCCGGA | 1 cut(s) | 1904 |
| Ksp22I | TGATCA | 8 cut(s) | 6, 139, 855, 916, 3223, 3615, 3934, 4072 |
| LmnI | GCTCC | 4 cut(s) | 1608, 3814, 3888, 4019 |
| Lsp1109I | GCAGC | 8 cut(s) | 111, 440, 1204, 1251, 1386, 1612, 2503, 3075 |
| MaeI | CTAG | 8 cut(s) | 840, 1175, 2019, 3098, 3627, 3818, 3987, 4064 |
| MaeII | ACGT | 7 cut(s) | 1129, 1347, 1924, 2188, 2198, 2907, 3868 |
| MflI | RGATCY | 3 cut(s) | 267, 594, 1930 |
| MhlI | GDGCHC | 4 cut(s) | 1401, 2118, 3125, 4189 |
| MlsI | TGGCCA | 2 cut(s) | 557, 830 |
| MluI | ACGCGT | 1 cut(s) | 2286 |
| MluNI | TGGCCA | 2 cut(s) | 557, 830 |
| MlyI | GAGTC | 2 cut(s) | 203, 2135 |
| MmeI | TCCRAC | 9 cut(s) | 1055, 1674, 1807, 1954, 2030, 2060, 2181, 3224, 4142 |
| Mox20I | TGGCCA | 2 cut(s) | 557, 830 |
| Mph1103I | ATGCAT | 4 cut(s) | 235, 1452, 2428, 3380 |
| MroI | TCCGGA | 1 cut(s) | 1904 |
| MroXI | GAANNNNTTC | 4 cut(s) | 738, 1082, 1302, 3183 |
| MscI | TGGCCA | 2 cut(s) | 557, 830 |
| MslI | CAYNNNNRTG | 8 cut(s) | 131, 1445, 1539, 1595, 3419, 3566, 3777, 4080 |
| Msp20I | TGGCCA | 2 cut(s) | 557, 830 |
| MspA1I | CMGCKG | 2 cut(s) | 2494, 3457 |
| MspCI | CTTAAG | 2 cut(s) | 1630, 2024 |
| MspI | CCGG | 4 cut(s) | 1905, 3371, 3518, 4056 |
| MspR9I | CCNGG | 6 cut(s) | 1509, 3231, 3518, 3519, 3576, 4057 |
| Mva1269I | GAATGC | 3 cut(s) | 389, 1084, 2173 |
| MvaI | CCWGG | 3 cut(s) | 1509, 3231, 3576 |
| MvnI | CGCG | 2 cut(s) | 2288, 3320 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 96, 836, 3259, 3454, 3987 |
| NciI | CCSGG | 3 cut(s) | 3518, 3519, 4057 |
| NcoI | CCATGG | 1 cut(s) | 29 |
| NdeI | CATATG | 1 cut(s) | 2566 |
| NheI | GCTAGC | 2 cut(s) | 3817, 3986 |
| NlaIV | GGNNCC | 5 cut(s) | 3122, 3235, 3559, 3902, 4107 |
| NmeAIII | GCCGAG | 1 cut(s) | 3935 |
| NmuCI | GTSAC | 7 cut(s) | 938, 1494, 1751, 3133, 3464, 3709, 3844 |
| NsiI | ATGCAT | 4 cut(s) | 235, 1452, 2428, 3380 |
| NspI | RCATGY | 5 cut(s) | 1320, 1388, 1657, 3378, 3801 |
| NspV | TTCGAA | 1 cut(s) | 393 |
| OliI | CACNNNNGTG | 1 cut(s) | 3566 |
| PaeI | GCATGC | 1 cut(s) | 3378 |
| PaeR7I | CTCGAG | 2 cut(s) | 1061, 1146 |
| PagI | TCATGA | 6 cut(s) | 379, 1051, 1534, 3772, 3832, 4078 |
| PceI | AGGCCT | 1 cut(s) | 1152 |
| PciI | ACATGT | 1 cut(s) | 3797 |
| PctI | GAATGC | 3 cut(s) | 389, 1084, 2173 |
| PdmI | GAANNNNTTC | 4 cut(s) | 738, 1082, 1302, 3183 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1042, 2738 |
| PleI | GAGTC | 2 cut(s) | 202, 2134 |
| PmaCI | CACGTG | 2 cut(s) | 1348, 3869 |
| PmlI | CACGTG | 2 cut(s) | 1348, 3869 |
| PpsI | GAGTC | 2 cut(s) | 202, 2134 |
| Ppu21I | YACGTR | 2 cut(s) | 1348, 3869 |
| PscI | ACATGT | 1 cut(s) | 3797 |
| PshBI | ATTAAT | 3 cut(s) | 1022, 1392, 3723 |
| PsiI | TTATAA | 1 cut(s) | 1431 |
| Psp1406I | AACGTT | 1 cut(s) | 1924 |
| Psp6I | CCWGG | 3 cut(s) | 1507, 3229, 3574 |
| PspCI | CACGTG | 2 cut(s) | 1348, 3869 |
| PspGI | CCWGG | 3 cut(s) | 1507, 3229, 3574 |
| PspN4I | GGNNCC | 5 cut(s) | 3122, 3235, 3559, 3902, 4107 |
| PspPI | GGNCC | 5 cut(s) | 1033, 1097, 1411, 3558, 3901 |
| PspXI | VCTCGAGB | 1 cut(s) | 1146 |
| PstI | CTGCAG | 1 cut(s) | 2493 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3293 |
| PsuI | RGATCY | 3 cut(s) | 267, 594, 1930 |
| PvuII | CAGCTG | 2 cut(s) | 2494, 3457 |
| RsaI | GTAC | 3 cut(s) | 563, 1639, 1734 |
| RsaNI | GTAC | 3 cut(s) | 562, 1638, 1733 |
| RseI | CAYNNNNRTG | 8 cut(s) | 131, 1445, 1539, 1595, 3419, 3566, 3777, 4080 |
| Sau96I | GGNCC | 5 cut(s) | 1033, 1097, 1411, 3558, 3901 |
| SchI | GAGTC | 2 cut(s) | 203, 2135 |
| ScrFI | CCNGG | 6 cut(s) | 1509, 3231, 3518, 3519, 3576, 4057 |
| SduI | GDGCHC | 4 cut(s) | 1401, 2118, 3125, 4189 |
| SfcI | CTRYAG | 3 cut(s) | 943, 2489, 4023 |
| Sfr274I | CTCGAG | 2 cut(s) | 1061, 1146 |
| SfuI | TTCGAA | 1 cut(s) | 393 |
| SinI | GGWCC | 3 cut(s) | 1033, 1097, 3901 |
| SlaI | CTCGAG | 2 cut(s) | 1061, 1146 |
| SmaI | CCCGGG | 1 cut(s) | 3519 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 131, 1445, 1539, 1595, 3419, 3566, 3777, 4080 |
| SmlI | CTYRAG | 7 cut(s) | 272, 1061, 1146, 1630, 1726, 2024, 2093 |
| SmoI | CTYRAG | 7 cut(s) | 272, 1061, 1146, 1630, 1726, 2024, 2093 |
| SphI | GCATGC | 1 cut(s) | 3378 |
| SseBI | AGGCCT | 1 cut(s) | 1152 |
| SsiI | CCGC | 7 cut(s) | 443, 654, 2157, 2827, 3068, 3744, 3821 |
| SspI | AATATT | 2 cut(s) | 1359, 1567 |
| SspMI | CTAG | 8 cut(s) | 840, 1175, 2019, 3098, 3627, 3818, 3987, 4064 |
| StuI | AGGCCT | 1 cut(s) | 1152 |
| StyD4I | CCNGG | 6 cut(s) | 1507, 3229, 3516, 3517, 3574, 4055 |
| StyI | CCWWGG | 8 cut(s) | 29, 1578, 2271, 2409, 2547, 2685, 2754, 3626 |
| TaiI | ACGT | 7 cut(s) | 1132, 1350, 1927, 2191, 2201, 2910, 3871 |
| TauI | GCSGC | 3 cut(s) | 446, 2160, 3070 |
| TscAI | CASTG | 3 cut(s) | 496, 3079, 3246 |
| TseFI | GTSAC | 7 cut(s) | 938, 1494, 1751, 3133, 3464, 3709, 3844 |
| TseI | GCWGC | 8 cut(s) | 99, 428, 1217, 1239, 1374, 1600, 2491, 3088 |
| Tsp45I | GTSAC | 7 cut(s) | 938, 1494, 1751, 3133, 3464, 3709, 3844 |
| TspGWI | ACGGA | 3 cut(s) | 1110, 3096, 3346 |
| TspMI | CCCGGG | 1 cut(s) | 3517 |
| TspRI | CASTG | 3 cut(s) | 496, 3079, 3246 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1042, 2738 |
| Vha464I | CTTAAG | 2 cut(s) | 1630, 2024 |
| VneI | GTGCAC | 1 cut(s) | 2114 |
| VpaK11BI | GGWCC | 3 cut(s) | 1033, 1097, 3901 |
| VspI | ATTAAT | 3 cut(s) | 1022, 1392, 3723 |
| XbaI | TCTAGA | 1 cut(s) | 3097 |
| XceI | RCATGY | 5 cut(s) | 1320, 1388, 1657, 3378, 3801 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3692 |
| XhoI | CTCGAG | 2 cut(s) | 1061, 1146 |
| XmaI | CCCGGG | 1 cut(s) | 3517 |
| XmaJI | CCTAGG | 1 cut(s) | 3626 |
| XmnI | GAANNNNTTC | 4 cut(s) | 738, 1082, 1302, 3183 |
| XspI | CTAG | 8 cut(s) | 840, 1175, 2019, 3098, 3627, 3818, 3987, 4064 |
| Zsp2I | ATGCAT | 4 cut(s) | 235, 1452, 2428, 3380 |