TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 21 - 187 | 5.5e-53 | TIR domain |
| TIR_2 | PF13676 | 23 - 121 | 7.2e-15 | TIR domain |
| NB-ARC | PF00931 | 209 - 374 | 8.4e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 446 - 514 | 1.5e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 689 - 785 | 1.9e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 703 - 785 | 6.3e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 856 - 937 | 5.3e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1718 |
| Acc36I | ACCTGC | 1 cut(s) | 3440 |
| Acc65I | GGTACC | 1 cut(s) | 375 |
| AccB1I | GGYRCC | 1 cut(s) | 375 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2856 |
| AccIII | TCCGGA | 1 cut(s) | 2569 |
| AciI | CCGC | 5 cut(s) | 687, 844, 2283, 2655, 3369 |
| AclI | AACGTT | 1 cut(s) | 1024 |
| AclWI | GGATC | 4 cut(s) | 319, 353, 366, 1322 |
| AcoI | YGGCCR | 2 cut(s) | 338, 2211 |
| AcuI | CTGAAG | 2 cut(s) | 561, 1804 |
| AfaI | GTAC | 8 cut(s) | 372, 377, 555, 618, 1443, 1999, 2985, 3165 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 270, 372, 794, 1972, 2027, 2362, 2856, 3423 |
| AflII | CTTAAG | 2 cut(s) | 2078, 2611 |
| AjiI | CACGTC | 1 cut(s) | 56 |
| AjnI | CCWGG | 5 cut(s) | 879, 1651, 1786, 2989, 3378 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2888, 2920, 3083, 3115 |
| AleI | CACNNNNGTG | 1 cut(s) | 2539 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 642, 674 |
| Alw21I | GWGCWC | 1 cut(s) | 3378 |
| Alw26I | GTCTC | 4 cut(s) | 2757, 2854, 3297, 3458 |
| Alw44I | GTGCAC | 1 cut(s) | 3374 |
| AlwI | GGATC | 4 cut(s) | 319, 353, 366, 1322 |
| Ama87I | CYCGRG | 1 cut(s) | 2147 |
| Aor13HI | TCCGGA | 1 cut(s) | 2569 |
| AoxI | GGCC | 6 cut(s) | 112, 338, 796, 1455, 1784, 2211 |
| ApaLI | GTGCAC | 1 cut(s) | 3374 |
| ApeKI | GCWGC | 5 cut(s) | 476, 993, 1250, 2136, 3366 |
| AseI | ATTAAT | 2 cut(s) | 147, 1725 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 288, 607, 1112, 1344, 1527 |
| Asp718I | GGTACC | 1 cut(s) | 375 |
| AspLEI | GCGC | 1 cut(s) | 2689 |
| AspS9I | GGNCC | 3 cut(s) | 1456, 1945, 2572 |
| AsuHPI | GGTGA | 7 cut(s) | 37, 407, 895, 1406, 1533, 2513, 2920 |
| AsuII | TTCGAA | 3 cut(s) | 2260, 2726, 3144 |
| AvaI | CYCGRG | 1 cut(s) | 2147 |
| AvaII | GGWCC | 2 cut(s) | 1945, 2572 |
| BaeGI | GKGCMC | 1 cut(s) | 3378 |
| BamHI | GGATCC | 1 cut(s) | 358 |
| BanI | GGYRCC | 1 cut(s) | 375 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2378, 2410 |
| BauI | CACGAG | 2 cut(s) | 612, 3237 |
| BbsI | GAAGAC | 1 cut(s) | 2642 |
| Bbv12I | GWGCWC | 1 cut(s) | 3378 |
| BbvI | GCAGC | 5 cut(s) | 488, 1005, 1237, 2123, 3353 |
| BccI | CCATC | 7 cut(s) | 447, 500, 798, 1400, 1819, 2170, 2222 |
| BceAI | ACGGC | 3 cut(s) | 477, 2226, 2458 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 468, 502, 2128, 2162 |
| BciT130I | CCWGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| BciVI | GTATCC | 2 cut(s) | 85, 3206 |
| BclI | TGATCA | 2 cut(s) | 2509, 2917 |
| BcoDI | GTCTC | 4 cut(s) | 2757, 2854, 3297, 3458 |
| BfaI | CTAG | 7 cut(s) | 800, 926, 1403, 2205, 2537, 3131, 3267 |
| BfmI | CTRYAG | 1 cut(s) | 3483 |
| BfoI | RGCGCY | 1 cut(s) | 2690 |
| BfrI | CTTAAG | 2 cut(s) | 2078, 2611 |
| BfuAI | ACCTGC | 1 cut(s) | 3440 |
| BfuI | GTATCC | 2 cut(s) | 85, 3206 |
| BglII | AGATCT | 1 cut(s) | 1475 |
| BisI | GCNGC | 5 cut(s) | 477, 994, 1251, 2137, 3367 |
| BlsI | GCNGC | 5 cut(s) | 478, 995, 1252, 2138, 3368 |
| BmcAI | AGTACT | 2 cut(s) | 1443, 3165 |
| Bme1390I | CCNGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| Bme18I | GGWCC | 2 cut(s) | 1945, 2572 |
| BmeT110I | CYCGRG | 1 cut(s) | 2147 |
| BmgBI | CACGTC | 1 cut(s) | 56 |
| BmgT120I | GGNCC | 3 cut(s) | 1456, 1945, 2572 |
| BmiI | GGNNCC | 5 cut(s) | 360, 377, 1775, 1947, 3354 |
| BmrFI | CCNGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1821 |
| BpiI | GAAGAC | 1 cut(s) | 2642 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 448, 480, 2531, 2563 |
| BpmI | CTGGAG | 4 cut(s) | 987, 1526, 1761, 2878 |
| Bpu14I | TTCGAA | 3 cut(s) | 2260, 2726, 3144 |
| BpuEI | CTTGAG | 2 cut(s) | 250, 650 |
| Bsa29I | ATCGAT | 1 cut(s) | 3477 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1590, 2508 |
| BsaI | GGTCTC | 1 cut(s) | 3458 |
| BsaJI | CCNNGG | 1 cut(s) | 1065 |
| BsaWI | WCCGGW | 1 cut(s) | 2569 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2851, 2881 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 270, 372, 794, 1972, 2027, 2362, 2856, 3423 |
| Bse118I | RCCGGY | 1 cut(s) | 340 |
| Bse1I | ACTGG | 3 cut(s) | 949, 1839, 2367 |
| Bse3DI | GCAATG | 1 cut(s) | 1353 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1590, 2508 |
| BseAI | TCCGGA | 1 cut(s) | 2569 |
| BseBI | CCWGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| BseCI | ATCGAT | 1 cut(s) | 3477 |
| BseDI | CCNNGG | 1 cut(s) | 1065 |
| BseJI | GATNNNNATC | 2 cut(s) | 1590, 2508 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 270, 372, 794, 1972, 2027, 2362, 2856, 3423 |
| BseMI | GCAATG | 1 cut(s) | 1353 |
| BseMII | CTCAG | 5 cut(s) | 2001, 2320, 2359, 2562, 2975 |
| BseNI | ACTGG | 3 cut(s) | 949, 1839, 2367 |
| BseRI | GAGGAG | 1 cut(s) | 30 |
| BseSI | GKGCMC | 1 cut(s) | 3378 |
| BseXI | GCAGC | 5 cut(s) | 488, 1005, 1237, 2123, 3353 |
| BseYI | CCCAGC | 1 cut(s) | 1795 |
| BsgI | GTGCAG | 2 cut(s) | 183, 439 |
| BshFI | GGCC | 6 cut(s) | 114, 340, 798, 1457, 1786, 2213 |
| BshNI | GGYRCC | 1 cut(s) | 375 |
| BshVI | ATCGAT | 1 cut(s) | 3477 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3378 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2147 |
| BsiSI | CCGG | 2 cut(s) | 341, 2570 |
| BslFI | GGGAC | 1 cut(s) | 1931 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 270, 372, 794, 1972, 2027, 2362, 2856, 3423 |
| BsmAI | GTCTC | 4 cut(s) | 2757, 2854, 3297, 3458 |
| BsmFI | GGGAC | 1 cut(s) | 1931 |
| BsmI | GAATGC | 1 cut(s) | 1114 |
| BsnI | GGCC | 6 cut(s) | 114, 340, 798, 1457, 1786, 2213 |
| Bso31I | GGTCTC | 1 cut(s) | 3458 |
| BsoBI | CYCGRG | 1 cut(s) | 2147 |
| Bsp119I | TTCGAA | 3 cut(s) | 2260, 2726, 3144 |
| Bsp1286I | GDGCHC | 1 cut(s) | 3378 |
| Bsp13I | TCCGGA | 1 cut(s) | 2569 |
| Bsp1407I | TGTACA | 2 cut(s) | 616, 1997 |
| Bsp143I | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| BspACI | CCGC | 5 cut(s) | 687, 844, 2283, 2655, 3369 |
| BspANI | GGCC | 6 cut(s) | 114, 340, 798, 1457, 1786, 2213 |
| BspCNI | CTCAG | 5 cut(s) | 2002, 2319, 2358, 2561, 2974 |
| BspDI | ATCGAT | 1 cut(s) | 3477 |
| BspEI | TCCGGA | 1 cut(s) | 2569 |
| BspHI | TCATGA | 2 cut(s) | 826, 1579 |
| BspLI | GGNNCC | 5 cut(s) | 360, 377, 1775, 1947, 3354 |
| BspMAI | CTGCAG | 1 cut(s) | 3487 |
| BspMI | ACCTGC | 1 cut(s) | 3440 |
| BspPI | GGATC | 4 cut(s) | 319, 353, 366, 1322 |
| BspQI | GCTCTTC | 1 cut(s) | 162 |
| BspT104I | TTCGAA | 3 cut(s) | 2260, 2726, 3144 |
| BspT107I | GGYRCC | 1 cut(s) | 375 |
| BspTI | CTTAAG | 2 cut(s) | 2078, 2611 |
| BspTNI | GGTCTC | 1 cut(s) | 3458 |
| BsrDI | GCAATG | 1 cut(s) | 1353 |
| BsrFI | RCCGGY | 1 cut(s) | 340 |
| BsrGI | TGTACA | 2 cut(s) | 616, 1997 |
| BsrI | ACTGG | 3 cut(s) | 949, 1839, 2367 |
| BssAI | RCCGGY | 1 cut(s) | 340 |
| BssECI | CCNNGG | 1 cut(s) | 1065 |
| BssMI | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| BssSI | CACGAG | 2 cut(s) | 612, 3237 |
| BssT1I | CCWWGG | 1 cut(s) | 1065 |
| Bst2BI | CACGAG | 2 cut(s) | 612, 3237 |
| Bst2UI | CCWGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| Bst4CI | ACNGT | 9 cut(s) | 375, 1316, 1859, 1997, 2334, 2399, 2483, 2576, 3194 |
| Bst6I | CTCTTC | 7 cut(s) | 40, 162, 213, 537, 2945, 2962, 3541 |
| BstAFI | CTTAAG | 2 cut(s) | 2078, 2611 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1501 |
| BstAUI | TGTACA | 2 cut(s) | 616, 1997 |
| BstBI | TTCGAA | 3 cut(s) | 2260, 2726, 3144 |
| BstC8I | GCNNGC | 5 cut(s) | 1248, 1398, 1555, 1732, 2659 |
| BstH2I | RGCGCY | 1 cut(s) | 2690 |
| BstHHI | GCGC | 1 cut(s) | 2689 |
| BstKTI | GATC | 8 cut(s) | 314, 361, 1330, 1478, 2248, 2512, 2920, 2938 |
| BstMAI | GTCTC | 4 cut(s) | 2757, 2854, 3297, 3458 |
| BstMBI | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 693, 1501, 1563, 1849, 2335, 3233, 3504 |
| BstNI | CCWGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| BstNSI | RCATGY | 4 cut(s) | 628, 1250, 1362, 1433 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1821 |
| BstSCI | CCNGG | 5 cut(s) | 879, 1651, 1786, 2989, 3378 |
| BstSFI | CTRYAG | 1 cut(s) | 3483 |
| BstSLI | GKGCMC | 1 cut(s) | 3378 |
| BstV1I | GCAGC | 5 cut(s) | 488, 1005, 1237, 2123, 3353 |
| BstV2I | GAAGAC | 1 cut(s) | 2642 |
| BstX2I | RGATCY | 3 cut(s) | 358, 1327, 1475 |
| BstYI | RGATCY | 3 cut(s) | 358, 1327, 1475 |
| Bsu15I | ATCGAT | 1 cut(s) | 3477 |
| BsuI | GTATCC | 2 cut(s) | 85, 3206 |
| BsuRI | GGCC | 6 cut(s) | 114, 340, 798, 1457, 1786, 2213 |
| BsuTUI | ATCGAT | 1 cut(s) | 3477 |
| BtrI | CACGTC | 1 cut(s) | 56 |
| BtsI | GCAGTG | 1 cut(s) | 1180 |
| BtsIMutI | CAGTG | 3 cut(s) | 1180, 1321, 3317 |
| BveI | ACCTGC | 1 cut(s) | 3440 |
| Cac8I | GCNNGC | 5 cut(s) | 1248, 1398, 1555, 1732, 2659 |
| CciI | TCATGA | 2 cut(s) | 826, 1579 |
| CfoI | GCGC | 1 cut(s) | 2689 |
| Cfr10I | RCCGGY | 1 cut(s) | 340 |
| Cfr13I | GGNCC | 3 cut(s) | 1456, 1945, 2572 |
| ClaI | ATCGAT | 1 cut(s) | 3477 |
| CpoI | CGGWCCG | 1 cut(s) | 2572 |
| CsiI | ACCWGGT | 1 cut(s) | 3378 |
| Csp6I | GTAC | 8 cut(s) | 371, 376, 554, 617, 1442, 1998, 2984, 3164 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2724, 2759 |
| CspI | CGGWCCG | 1 cut(s) | 2572 |
| CviQI | GTAC | 8 cut(s) | 371, 376, 554, 617, 1442, 1998, 2984, 3164 |
| DpnI | GATC | 8 cut(s) | 313, 360, 1329, 1477, 2247, 2511, 2919, 2937 |
| DpnII | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| DraI | TTTAAA | 3 cut(s) | 1690, 1905, 3186 |
| EaeI | YGGCCR | 2 cut(s) | 338, 2211 |
| Eam1104I | CTCTTC | 7 cut(s) | 40, 162, 213, 537, 2945, 2962, 3541 |
| EarI | CTCTTC | 7 cut(s) | 40, 162, 213, 537, 2945, 2962, 3541 |
| EciI | GGCGGA | 2 cut(s) | 702, 859 |
| Eco130I | CCWWGG | 1 cut(s) | 1065 |
| Eco147I | AGGCCT | 1 cut(s) | 798 |
| Eco31I | GGTCTC | 1 cut(s) | 3458 |
| Eco32I | GATATC | 1 cut(s) | 1288 |
| Eco47I | GGWCC | 2 cut(s) | 1945, 2572 |
| Eco57I | CTGAAG | 2 cut(s) | 561, 1804 |
| Eco88I | CYCGRG | 1 cut(s) | 2147 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1456, 1945 |
| EcoRI | GAATTC | 1 cut(s) | 2972 |
| EcoRII | CCWGG | 5 cut(s) | 879, 1651, 1786, 2989, 3378 |
| EcoRV | GATATC | 1 cut(s) | 1288 |
| EcoT14I | CCWWGG | 1 cut(s) | 1065 |
| EcoT22I | ATGCAT | 1 cut(s) | 1497 |
| ErhI | CCWWGG | 1 cut(s) | 1065 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 612, 644, 1332, 1364 |
| FaqI | GGGAC | 1 cut(s) | 1931 |
| FauI | CCCGC | 1 cut(s) | 2662 |
| FbaI | TGATCA | 2 cut(s) | 2509, 2917 |
| Fnu4HI | GCNGC | 5 cut(s) | 477, 994, 1251, 2137, 3367 |
| Fsp4HI | GCNGC | 5 cut(s) | 477, 994, 1251, 2137, 3367 |
| FspBI | CTAG | 7 cut(s) | 800, 926, 1403, 2205, 2537, 3131, 3267 |
| GlaI | GCGC | 1 cut(s) | 2688 |
| GluI | GCNGC | 5 cut(s) | 477, 994, 1251, 2137, 3367 |
| GsaI | CCCAGC | 1 cut(s) | 1799 |
| GsuI | CTGGAG | 4 cut(s) | 987, 1526, 1761, 2878 |
| HaeII | RGCGCY | 1 cut(s) | 2690 |
| HaeIII | GGCC | 6 cut(s) | 114, 340, 798, 1457, 1786, 2213 |
| HapII | CCGG | 2 cut(s) | 341, 2570 |
| HhaI | GCGC | 1 cut(s) | 2689 |
| Hin6I | GCGC | 1 cut(s) | 2687 |
| HinP1I | GCGC | 1 cut(s) | 2687 |
| HindIII | AAGCTT | 2 cut(s) | 2042, 2729 |
| HpaII | CCGG | 2 cut(s) | 341, 2570 |
| HphI | GGTGA | 7 cut(s) | 37, 407, 895, 1406, 1533, 2513, 2920 |
| Hpy166II | GTNNAC | 9 cut(s) | 53, 495, 617, 721, 1201, 1214, 1376, 1826, 3376 |
| Hpy8I | GTNNAC | 9 cut(s) | 53, 495, 617, 721, 1201, 1214, 1376, 1826, 3376 |
| Hpy99I | CGWCG | 1 cut(s) | 3204 |
| HpyCH4III | ACNGT | 9 cut(s) | 375, 1316, 1859, 1997, 2334, 2399, 2483, 2576, 3194 |
| HpyCH4IV | ACGT | 4 cut(s) | 55, 568, 1024, 1561 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 693, 1501, 1563, 1849, 2335, 3233, 3504 |
| HpySE526I | ACGT | 4 cut(s) | 55, 568, 1024, 1561 |
| HspAI | GCGC | 1 cut(s) | 2687 |
| Kpn2I | TCCGGA | 1 cut(s) | 2569 |
| KpnI | GGTACC | 1 cut(s) | 379 |
| Ksp22I | TGATCA | 2 cut(s) | 2509, 2917 |
| Kzo9I | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| LguI | GCTCTTC | 1 cut(s) | 162 |
| LmnI | GCTCC | 1 cut(s) | 3224 |
| Lsp1109I | GCAGC | 5 cut(s) | 488, 1005, 1237, 2123, 3353 |
| MabI | ACCWGGT | 1 cut(s) | 3378 |
| MaeI | CTAG | 7 cut(s) | 800, 926, 1403, 2205, 2537, 3131, 3267 |
| MaeII | ACGT | 4 cut(s) | 55, 568, 1024, 1561 |
| MaeIII | GTNAC | 9 cut(s) | 769, 1091, 1310, 1539, 1859, 1991, 2477, 2867, 3112 |
| MalI | GATC | 8 cut(s) | 313, 360, 1329, 1477, 2247, 2511, 2919, 2937 |
| MboI | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| MfeI | CAATTG | 6 cut(s) | 213, 329, 705, 1155, 2235, 2851 |
| MflI | RGATCY | 3 cut(s) | 358, 1327, 1475 |
| MhlI | GDGCHC | 1 cut(s) | 3378 |
| MlyI | GAGTC | 7 cut(s) | 230, 1547, 2337, 2856, 3299, 3330, 3435 |
| MmeI | TCCRAC | 7 cut(s) | 580, 933, 1839, 2008, 2438, 2820, 3182 |
| Mph1103I | ATGCAT | 1 cut(s) | 1497 |
| MroI | TCCGGA | 1 cut(s) | 2569 |
| MroXI | GAANNNNTTC | 5 cut(s) | 288, 607, 1112, 1344, 1527 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1221, 1584, 2539 |
| MspA1I | CMGCKG | 1 cut(s) | 3018 |
| MspCI | CTTAAG | 2 cut(s) | 2078, 2611 |
| MspI | CCGG | 2 cut(s) | 341, 2570 |
| MspR9I | CCNGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| MunI | CAATTG | 6 cut(s) | 213, 329, 705, 1155, 2235, 2851 |
| Mva1269I | GAATGC | 1 cut(s) | 1114 |
| MvaI | CCWGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 693, 1501, 1563, 1849, 2335, 3233, 3504 |
| NdeII | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| NlaIV | GGNNCC | 5 cut(s) | 360, 377, 1775, 1947, 3354 |
| NmuCI | GTSAC | 4 cut(s) | 1539, 1859, 2477, 2867 |
| NsiI | ATGCAT | 1 cut(s) | 1497 |
| NspI | RCATGY | 4 cut(s) | 628, 1250, 1362, 1433 |
| NspV | TTCGAA | 3 cut(s) | 2260, 2726, 3144 |
| OliI | CACNNNNGTG | 1 cut(s) | 2539 |
| PaeI | GCATGC | 1 cut(s) | 1250 |
| PaeR7I | CTCGAG | 1 cut(s) | 2147 |
| PagI | TCATGA | 2 cut(s) | 826, 1579 |
| PceI | AGGCCT | 1 cut(s) | 798 |
| PciSI | GCTCTTC | 1 cut(s) | 162 |
| PctI | GAATGC | 1 cut(s) | 1114 |
| PdmI | GAANNNNTTC | 5 cut(s) | 288, 607, 1112, 1344, 1527 |
| PflFI | GACNNNGTC | 1 cut(s) | 443 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2856 |
| PkrI | GCNGC | 5 cut(s) | 478, 995, 1252, 2138, 3368 |
| PleI | GAGTC | 7 cut(s) | 229, 1546, 2337, 2856, 3298, 3330, 3435 |
| PpsI | GAGTC | 7 cut(s) | 229, 1546, 2337, 2856, 3298, 3330, 3435 |
| PpuMI | RGGWCCY | 1 cut(s) | 1945 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1821 |
| PshBI | ATTAAT | 2 cut(s) | 147, 1725 |
| PsiI | TTATAA | 1 cut(s) | 1718 |
| Psp1406I | AACGTT | 1 cut(s) | 1024 |
| Psp5II | RGGWCCY | 1 cut(s) | 1945 |
| Psp6I | CCWGG | 5 cut(s) | 879, 1651, 1786, 2989, 3378 |
| PspFI | CCCAGC | 1 cut(s) | 1795 |
| PspGI | CCWGG | 5 cut(s) | 879, 1651, 1786, 2989, 3378 |
| PspN4I | GGNNCC | 5 cut(s) | 360, 377, 1775, 1947, 3354 |
| PspPI | GGNCC | 3 cut(s) | 1456, 1945, 2572 |
| PspPPI | RGGWCCY | 1 cut(s) | 1945 |
| PstI | CTGCAG | 1 cut(s) | 3487 |
| PsuI | RGATCY | 3 cut(s) | 358, 1327, 1475 |
| PsyI | GACNNNGTC | 1 cut(s) | 443 |
| PvuII | CAGCTG | 1 cut(s) | 3018 |
| RsaI | GTAC | 8 cut(s) | 372, 377, 555, 618, 1443, 1999, 2985, 3165 |
| RsaNI | GTAC | 8 cut(s) | 371, 376, 554, 617, 1442, 1998, 2984, 3164 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1221, 1584, 2539 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2572 |
| RsrII | CGGWCCG | 1 cut(s) | 2572 |
| SapI | GCTCTTC | 1 cut(s) | 162 |
| SatI | GCNGC | 5 cut(s) | 477, 994, 1251, 2137, 3367 |
| Sau3AI | GATC | 8 cut(s) | 311, 358, 1327, 1475, 2245, 2509, 2917, 2935 |
| Sau96I | GGNCC | 3 cut(s) | 1456, 1945, 2572 |
| ScaI | AGTACT | 2 cut(s) | 1443, 3165 |
| SchI | GAGTC | 7 cut(s) | 230, 1547, 2337, 2856, 3299, 3330, 3435 |
| ScrFI | CCNGG | 5 cut(s) | 881, 1653, 1788, 2991, 3380 |
| SduI | GDGCHC | 1 cut(s) | 3378 |
| SexAI | ACCWGGT | 1 cut(s) | 3378 |
| SfcI | CTRYAG | 1 cut(s) | 3483 |
| Sfr274I | CTCGAG | 1 cut(s) | 2147 |
| SfuI | TTCGAA | 3 cut(s) | 2260, 2726, 3144 |
| SinI | GGWCC | 2 cut(s) | 1945, 2572 |
| SlaI | CTCGAG | 1 cut(s) | 2147 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1221, 1584, 2539 |
| SmlI | CTYRAG | 5 cut(s) | 265, 629, 2078, 2147, 2611 |
| SmoI | CTYRAG | 5 cut(s) | 265, 629, 2078, 2147, 2611 |
| SphI | GCATGC | 1 cut(s) | 1250 |
| SseBI | AGGCCT | 1 cut(s) | 798 |
| SsiI | CCGC | 5 cut(s) | 687, 844, 2283, 2655, 3369 |
| SspI | AATATT | 2 cut(s) | 2059, 2751 |
| SspMI | CTAG | 7 cut(s) | 800, 926, 1403, 2205, 2537, 3131, 3267 |
| StuI | AGGCCT | 1 cut(s) | 798 |
| StyD4I | CCNGG | 5 cut(s) | 879, 1651, 1786, 2989, 3378 |
| StyI | CCWWGG | 1 cut(s) | 1065 |
| TaaI | ACNGT | 9 cut(s) | 375, 1316, 1859, 1997, 2334, 2399, 2483, 2576, 3194 |
| TaiI | ACGT | 4 cut(s) | 58, 571, 1027, 1564 |
| TaqII | GACCGA | 1 cut(s) | 875 |
| TatI | WGTACW | 5 cut(s) | 616, 1441, 1997, 2983, 3163 |
| TscAI | CASTG | 3 cut(s) | 1187, 1321, 3317 |
| TseFI | GTSAC | 4 cut(s) | 1539, 1859, 2477, 2867 |
| TseI | GCWGC | 5 cut(s) | 476, 993, 1250, 2136, 3366 |
| Tsp45I | GTSAC | 4 cut(s) | 1539, 1859, 2477, 2867 |
| TspGWI | ACGGA | 6 cut(s) | 29, 1320, 3139, 3188, 3249, 3439 |
| TspRI | CASTG | 3 cut(s) | 1187, 1321, 3317 |
| Tth111I | GACNNNGTC | 1 cut(s) | 443 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2856 |
| Vha464I | CTTAAG | 2 cut(s) | 2078, 2611 |
| VneI | GTGCAC | 1 cut(s) | 3374 |
| VpaK11BI | GGWCC | 2 cut(s) | 1945, 2572 |
| VspI | ATTAAT | 2 cut(s) | 147, 1725 |
| XbaI | TCTAGA | 2 cut(s) | 925, 2204 |
| XceI | RCATGY | 4 cut(s) | 628, 1250, 1362, 1433 |
| XhoI | CTCGAG | 1 cut(s) | 2147 |
| XmnI | GAANNNNTTC | 5 cut(s) | 288, 607, 1112, 1344, 1527 |
| XspI | CTAG | 7 cut(s) | 800, 926, 1403, 2205, 2537, 3131, 3267 |
| ZrmI | AGTACT | 2 cut(s) | 1443, 3165 |
| Zsp2I | ATGCAT | 1 cut(s) | 1497 |