TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 432, 735 |
| AatII | GACGTC | 1 cut(s) | 2793 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 69 |
| AccBSI | CCGCTC | 1 cut(s) | 1822 |
| AccII | CGCG | 1 cut(s) | 112 |
| AccIII | TCCGGA | 2 cut(s) | 1958, 2374 |
| AciI | CCGC | 7 cut(s) | 1820, 2133, 2211, 2300, 2556, 2825, 3255 |
| AclI | AACGTT | 2 cut(s) | 2658, 2693 |
| AclWI | GGATC | 5 cut(s) | 301, 445, 991, 1550, 2909 |
| AcoI | YGGCCR | 3 cut(s) | 597, 813, 870 |
| AcuI | CTGAAG | 1 cut(s) | 1102 |
| AcyI | GRCGYC | 1 cut(s) | 2790 |
| AfaI | GTAC | 6 cut(s) | 583, 1238, 1452, 1650, 2904, 2979 |
| AfeI | AGCGCT | 1 cut(s) | 213 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 69, 282, 1154, 2439 |
| AflII | CTTAAG | 2 cut(s) | 1681, 1777 |
| AflIII | ACRYGT | 3 cut(s) | 652, 2748, 2905 |
| AgeI | ACCGGT | 1 cut(s) | 346 |
| AjnI | CCWGG | 3 cut(s) | 1558, 2860, 2917 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 594, 626 |
| Alw21I | GWGCWC | 2 cut(s) | 631, 1116 |
| Alw26I | GTCTC | 6 cut(s) | 849, 952, 2715, 2722, 2797, 3098 |
| Alw44I | GTGCAC | 1 cut(s) | 627 |
| AlwI | GGATC | 5 cut(s) | 301, 445, 991, 1550, 2909 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 29, 2349 |
| Aor13HI | TCCGGA | 2 cut(s) | 1958, 2374 |
| Aor51HI | AGCGCT | 1 cut(s) | 213 |
| AoxI | GGCC | 8 cut(s) | 127, 415, 597, 813, 870, 1198, 1464, 1793 |
| ApaLI | GTGCAC | 1 cut(s) | 627 |
| AsiGI | ACCGGT | 1 cut(s) | 346 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1130, 1353, 1533, 2523, 2685 |
| AspLEI | GCGC | 4 cut(s) | 114, 214, 1569, 2317 |
| AspS9I | GGNCC | 2 cut(s) | 1145, 1465 |
| AsuC2I | CCSGG | 2 cut(s) | 2159, 2251 |
| AsuII | TTCGAA | 1 cut(s) | 756 |
| AvaII | GGWCC | 1 cut(s) | 1145 |
| BaeGI | GKGCMC | 1 cut(s) | 631 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1220, 1253 |
| BalI | TGGCCA | 2 cut(s) | 815, 872 |
| BanII | GRGCYC | 1 cut(s) | 1116 |
| BauI | CACGAG | 2 cut(s) | 624, 3284 |
| BbsI | GAAGAC | 1 cut(s) | 2543 |
| Bbv12I | GWGCWC | 2 cut(s) | 631, 1116 |
| BceAI | ACGGC | 4 cut(s) | 1202, 1739, 2877, 3178 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 251, 285 |
| BciT130I | CCWGG | 3 cut(s) | 1560, 2862, 2919 |
| BclI | TGATCA | 2 cut(s) | 1281, 3181 |
| BcnI | CCSGG | 2 cut(s) | 2159, 2251 |
| BcoDI | GTCTC | 6 cut(s) | 849, 952, 2715, 2722, 2797, 3098 |
| BfaI | CTAG | 2 cut(s) | 848, 2754 |
| BfmI | CTRYAG | 1 cut(s) | 3048 |
| BfoI | RGCGCY | 1 cut(s) | 215 |
| BfrI | CTTAAG | 2 cut(s) | 1681, 1777 |
| BlpI | GCTNAGC | 1 cut(s) | 973 |
| BmcAI | AGTACT | 1 cut(s) | 2979 |
| Bme1390I | CCNGG | 5 cut(s) | 1560, 2159, 2251, 2862, 2919 |
| Bme18I | GGWCC | 1 cut(s) | 1145 |
| BmgT120I | GGNCC | 2 cut(s) | 1145, 1465 |
| BmiI | GGNNCC | 2 cut(s) | 1753, 2209 |
| BmrFI | CCNGG | 5 cut(s) | 1560, 2159, 2251, 2862, 2919 |
| BmrI | ACTGGG | 1 cut(s) | 602 |
| BmsI | GCATC | 4 cut(s) | 1315, 1488, 2827, 3100 |
| BmuI | ACTGGG | 1 cut(s) | 602 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3050 |
| BpiI | GAAGAC | 1 cut(s) | 2543 |
| BpmI | CTGGAG | 2 cut(s) | 1581, 1770 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 973 |
| Bpu14I | TTCGAA | 1 cut(s) | 756 |
| BpuEI | CTTGAG | 4 cut(s) | 109, 440, 1130, 1179 |
| BpuMI | CCSGG | 2 cut(s) | 2159, 2251 |
| Bsa29I | ATCGAT | 1 cut(s) | 2020 |
| BsaAI | YACGTR | 1 cut(s) | 2906 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1596 |
| BsaHI | GRCGYC | 1 cut(s) | 2790 |
| BsaJI | CCNNGG | 3 cut(s) | 68, 2951, 3220 |
| BsaWI | WCCGGW | 3 cut(s) | 346, 1958, 2374 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2356, 2386 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 69, 282, 1154, 2439 |
| Bse118I | RCCGGY | 2 cut(s) | 346, 3145 |
| Bse1I | ACTGG | 3 cut(s) | 608, 700, 2682 |
| Bse3DI | GCAATG | 4 cut(s) | 1147, 1362, 2286, 2842 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1596 |
| BseAI | TCCGGA | 2 cut(s) | 1958, 2374 |
| BseBI | CCWGG | 3 cut(s) | 1560, 2862, 2919 |
| BseCI | ATCGAT | 1 cut(s) | 2020 |
| BseDI | CCNNGG | 3 cut(s) | 68, 2951, 3220 |
| BseGI | GGATG | 7 cut(s) | 598, 1159, 1339, 1503, 2748, 3175, 3295 |
| BseJI | GATNNNNATC | 1 cut(s) | 1596 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 69, 282, 1154, 2439 |
| BseMI | GCAATG | 4 cut(s) | 1147, 1362, 2286, 2842 |
| BseMII | CTCAG | 5 cut(s) | 384, 787, 2001, 2105, 2356 |
| BseNI | ACTGG | 3 cut(s) | 608, 700, 2682 |
| BseRI | GAGGAG | 5 cut(s) | 33, 36, 39, 206, 207 |
| BseSI | GKGCMC | 1 cut(s) | 631 |
| BsgI | GTGCAG | 1 cut(s) | 1997 |
| Bsh1236I | CGCG | 1 cut(s) | 112 |
| BshFI | GGCC | 8 cut(s) | 129, 417, 599, 815, 872, 1200, 1466, 1795 |
| BshTI | ACCGGT | 1 cut(s) | 346 |
| BshVI | ATCGAT | 1 cut(s) | 2020 |
| BsiHKAI | GWGCWC | 2 cut(s) | 631, 1116 |
| BsiSI | CCGG | 6 cut(s) | 347, 1959, 2159, 2250, 2375, 3146 |
| BsiWI | CGTACG | 1 cut(s) | 2902 |
| BslFI | GGGAC | 3 cut(s) | 351, 420, 706 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 69, 282, 1154, 2439 |
| BsmAI | GTCTC | 6 cut(s) | 849, 952, 2715, 2722, 2797, 3098 |
| BsmBI | CGTCTC | 1 cut(s) | 2797 |
| BsmFI | GGGAC | 3 cut(s) | 351, 420, 706 |
| BsmI | GAATGC | 4 cut(s) | 764, 1132, 2465, 3032 |
| BsnI | GGCC | 8 cut(s) | 129, 417, 599, 815, 872, 1200, 1466, 1795 |
| Bsp119I | TTCGAA | 1 cut(s) | 756 |
| Bsp1286I | GDGCHC | 2 cut(s) | 631, 1116 |
| Bsp13I | TCCGGA | 2 cut(s) | 1958, 2374 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 973 |
| Bsp19I | CCATGG | 1 cut(s) | 68 |
| BspACI | CCGC | 7 cut(s) | 1820, 2133, 2211, 2300, 2556, 2825, 3255 |
| BspANI | GGCC | 8 cut(s) | 129, 417, 599, 815, 872, 1200, 1466, 1795 |
| BspCNI | CTCAG | 5 cut(s) | 383, 786, 2002, 2106, 2355 |
| BspDI | ATCGAT | 1 cut(s) | 2020 |
| BspEI | TCCGGA | 2 cut(s) | 1958, 2374 |
| BspFNI | CGCG | 1 cut(s) | 112 |
| BspHI | TCATGA | 2 cut(s) | 1099, 1585 |
| BspLI | GGNNCC | 2 cut(s) | 1753, 2209 |
| BspPI | GGATC | 5 cut(s) | 301, 445, 991, 1550, 2909 |
| BspQI | GCTCTTC | 1 cut(s) | 1121 |
| BspT104I | TTCGAA | 1 cut(s) | 756 |
| BspTI | CTTAAG | 2 cut(s) | 1681, 1777 |
| BsrBI | CCGCTC | 1 cut(s) | 1822 |
| BsrDI | GCAATG | 4 cut(s) | 1147, 1362, 2286, 2842 |
| BsrFI | RCCGGY | 2 cut(s) | 346, 3145 |
| BsrI | ACTGG | 3 cut(s) | 608, 700, 2682 |
| BssAI | RCCGGY | 2 cut(s) | 346, 3145 |
| BssECI | CCNNGG | 3 cut(s) | 68, 2951, 3220 |
| BssNI | GRCGYC | 1 cut(s) | 2790 |
| BssSI | CACGAG | 2 cut(s) | 624, 3284 |
| BssT1I | CCWWGG | 1 cut(s) | 68 |
| Bst2BI | CACGAG | 2 cut(s) | 624, 3284 |
| Bst2UI | CCWGG | 3 cut(s) | 1560, 2862, 2919 |
| Bst6I | CTCTTC | 2 cut(s) | 225, 1121 |
| BstACI | GRCGYC | 1 cut(s) | 2790 |
| BstAFI | CTTAAG | 2 cut(s) | 1681, 1777 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 29, 1178 |
| BstBAI | YACGTR | 1 cut(s) | 2906 |
| BstBI | TTCGAA | 1 cut(s) | 756 |
| BstC8I | GCNNGC | 6 cut(s) | 415, 1191, 1263, 1369, 2560, 2806 |
| BstDSI | CCRYGG | 2 cut(s) | 68, 3220 |
| BstF5I | GGATG | 7 cut(s) | 598, 1159, 1339, 1503, 2748, 3175, 3295 |
| BstFNI | CGCG | 1 cut(s) | 112 |
| BstH2I | RGCGCY | 1 cut(s) | 215 |
| BstHHI | GCGC | 4 cut(s) | 114, 214, 1569, 2317 |
| BstMAI | GTCTC | 6 cut(s) | 849, 952, 2715, 2722, 2797, 3098 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 11, 20, 23, 26, 29, 423, 1169, 1178 |
| BstNI | CCWGG | 3 cut(s) | 1560, 2862, 2919 |
| BstNSI | RCATGY | 4 cut(s) | 656, 1193, 2562, 2752 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3050 |
| BstSCI | CCNGG | 5 cut(s) | 1558, 2157, 2249, 2860, 2917 |
| BstSFI | CTRYAG | 1 cut(s) | 3048 |
| BstSLI | GKGCMC | 1 cut(s) | 631 |
| BstUI | CGCG | 1 cut(s) | 112 |
| BstV2I | GAAGAC | 1 cut(s) | 2543 |
| BstX2I | RGATCY | 2 cut(s) | 306, 450 |
| BstYI | RGATCY | 2 cut(s) | 306, 450 |
| Bsu15I | ATCGAT | 1 cut(s) | 2020 |
| BsuRI | GGCC | 8 cut(s) | 129, 417, 599, 815, 872, 1200, 1466, 1795 |
| BsuTUI | ATCGAT | 1 cut(s) | 2020 |
| BtgI | CCRYGG | 2 cut(s) | 68, 3220 |
| BtsCI | GGATG | 7 cut(s) | 598, 1159, 1339, 1503, 2748, 3175, 3295 |
| BtsI | GCAGTG | 1 cut(s) | 2872 |
| BtsIMutI | CAGTG | 5 cut(s) | 1262, 2088, 2350, 2872, 3206 |
| Cac8I | GCNNGC | 6 cut(s) | 415, 1191, 1263, 1369, 2560, 2806 |
| CaiI | CAGNNNCTG | 2 cut(s) | 29, 2349 |
| CciI | TCATGA | 2 cut(s) | 1099, 1585 |
| CfoI | GCGC | 4 cut(s) | 114, 214, 1569, 2317 |
| Cfr10I | RCCGGY | 2 cut(s) | 346, 3145 |
| Cfr13I | GGNCC | 2 cut(s) | 1145, 1465 |
| ClaI | ATCGAT | 1 cut(s) | 2020 |
| CseI | GACGC | 1 cut(s) | 137 |
| Csp6I | GTAC | 6 cut(s) | 582, 1237, 1451, 1649, 2903, 2978 |
| CspAI | ACCGGT | 1 cut(s) | 346 |
| CviQI | GTAC | 6 cut(s) | 582, 1237, 1451, 1649, 2903, 2978 |
| DraI | TTTAAA | 1 cut(s) | 1378 |
| EaeI | YGGCCR | 3 cut(s) | 597, 813, 870 |
| Eam1104I | CTCTTC | 2 cut(s) | 225, 1121 |
| EarI | CTCTTC | 2 cut(s) | 225, 1121 |
| Ecl136II | GAGCTC | 1 cut(s) | 1114 |
| Eco130I | CCWWGG | 1 cut(s) | 68 |
| Eco147I | AGGCCT | 1 cut(s) | 1200 |
| Eco24I | GRGCYC | 1 cut(s) | 1116 |
| Eco47I | GGWCC | 1 cut(s) | 1145 |
| Eco47III | AGCGCT | 1 cut(s) | 213 |
| Eco53kI | GAGCTC | 1 cut(s) | 1114 |
| Eco57I | CTGAAG | 1 cut(s) | 1102 |
| EcoICRI | GAGCTC | 1 cut(s) | 1114 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1465 |
| EcoRII | CCWGG | 3 cut(s) | 1558, 2860, 2917 |
| EcoT14I | CCWWGG | 1 cut(s) | 68 |
| EcoT22I | ATGCAT | 2 cut(s) | 1330, 2564 |
| EcoT38I | GRGCYC | 1 cut(s) | 1116 |
| ErhI | CCWWGG | 1 cut(s) | 68 |
| Esp3I | CGTCTC | 1 cut(s) | 2797 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1341, 1373 |
| FaqI | GGGAC | 3 cut(s) | 351, 420, 706 |
| FauI | CCCGC | 2 cut(s) | 2563, 2818 |
| FbaI | TGATCA | 2 cut(s) | 1281, 3181 |
| FokI | GGATG | 7 cut(s) | 605, 1166, 1346, 1510, 2755, 3182, 3302 |
| FriOI | GRGCYC | 1 cut(s) | 1116 |
| FspBI | CTAG | 2 cut(s) | 848, 2754 |
| GlaI | GCGC | 4 cut(s) | 113, 213, 1568, 2316 |
| GsuI | CTGGAG | 2 cut(s) | 1581, 1770 |
| HaeII | RGCGCY | 1 cut(s) | 215 |
| HaeIII | GGCC | 8 cut(s) | 129, 417, 599, 815, 872, 1200, 1466, 1795 |
| HapII | CCGG | 6 cut(s) | 347, 1959, 2159, 2250, 2375, 3146 |
| HgaI | GACGC | 1 cut(s) | 137 |
| HhaI | GCGC | 4 cut(s) | 114, 214, 1569, 2317 |
| Hin1I | GRCGYC | 1 cut(s) | 2790 |
| Hin6I | GCGC | 4 cut(s) | 112, 212, 1567, 2315 |
| HinP1I | GCGC | 4 cut(s) | 112, 212, 1567, 2315 |
| HincII | GTYRAC | 2 cut(s) | 1047, 2065 |
| HindII | GTYRAC | 2 cut(s) | 1047, 2065 |
| HindIII | AAGCTT | 2 cut(s) | 2101, 2357 |
| HpaI | GTTAAC | 2 cut(s) | 1047, 2065 |
| HpaII | CCGG | 6 cut(s) | 347, 1959, 2159, 2250, 2375, 3146 |
| Hpy166II | GTNNAC | 8 cut(s) | 501, 629, 949, 1047, 1229, 2065, 3217, 3262 |
| Hpy8I | GTNNAC | 8 cut(s) | 501, 629, 949, 1047, 1229, 2065, 3217, 3262 |
| HpyCH4IV | ACGT | 7 cut(s) | 1305, 1449, 2658, 2693, 2790, 2901, 2905 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 11, 20, 23, 26, 29, 423, 1169, 1178 |
| HpySE526I | ACGT | 7 cut(s) | 1305, 1449, 2658, 2693, 2790, 2901, 2905 |
| Hsp92I | GRCGYC | 1 cut(s) | 2790 |
| HspAI | GCGC | 4 cut(s) | 112, 212, 1567, 2315 |
| Kpn2I | TCCGGA | 2 cut(s) | 1958, 2374 |
| Ksp22I | TGATCA | 2 cut(s) | 1281, 3181 |
| KspAI | GTTAAC | 2 cut(s) | 1047, 2065 |
| LguI | GCTCTTC | 1 cut(s) | 1121 |
| LmnI | GCTCC | 3 cut(s) | 219, 1751, 2377 |
| LweI | GCATC | 4 cut(s) | 1315, 1488, 2827, 3100 |
| MaeI | CTAG | 2 cut(s) | 848, 2754 |
| MaeII | ACGT | 7 cut(s) | 1305, 1449, 2658, 2693, 2790, 2901, 2905 |
| MaeIII | GTNAC | 4 cut(s) | 963, 1391, 2362, 2908 |
| MbiI | CCGCTC | 1 cut(s) | 1822 |
| MfeI | CAATTG | 2 cut(s) | 717, 2235 |
| MflI | RGATCY | 2 cut(s) | 306, 450 |
| MhlI | GDGCHC | 2 cut(s) | 631, 1116 |
| MlsI | TGGCCA | 2 cut(s) | 815, 872 |
| MluNI | TGGCCA | 2 cut(s) | 815, 872 |
| MlyI | GAGTC | 6 cut(s) | 242, 373, 496, 1993, 2557, 2724 |
| Mox20I | TGGCCA | 2 cut(s) | 815, 872 |
| Mph1103I | ATGCAT | 2 cut(s) | 1330, 2564 |
| MroI | TCCGGA | 2 cut(s) | 1958, 2374 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1130, 1353, 1533, 2523, 2685 |
| MscI | TGGCCA | 2 cut(s) | 815, 872 |
| MslI | CAYNNNNRTG | 4 cut(s) | 170, 522, 1590, 3288 |
| Msp20I | TGGCCA | 2 cut(s) | 815, 872 |
| MspA1I | CMGCKG | 2 cut(s) | 29, 1654 |
| MspCI | CTTAAG | 2 cut(s) | 1681, 1777 |
| MspI | CCGG | 6 cut(s) | 347, 1959, 2159, 2250, 2375, 3146 |
| MspR9I | CCNGG | 5 cut(s) | 1560, 2159, 2251, 2862, 2919 |
| MunI | CAATTG | 2 cut(s) | 717, 2235 |
| Mva1269I | GAATGC | 4 cut(s) | 764, 1132, 2465, 3032 |
| MvaI | CCWGG | 3 cut(s) | 1560, 2862, 2919 |
| MvnI | CGCG | 1 cut(s) | 112 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 11, 20, 23, 26, 29, 423, 1169, 1178 |
| NciI | CCSGG | 2 cut(s) | 2159, 2251 |
| NcoI | CCATGG | 1 cut(s) | 68 |
| NlaIV | GGNNCC | 2 cut(s) | 1753, 2209 |
| NmeAIII | GCCGAG | 1 cut(s) | 1316 |
| NmuCI | GTSAC | 1 cut(s) | 2908 |
| NsiI | ATGCAT | 2 cut(s) | 1330, 2564 |
| NspI | RCATGY | 4 cut(s) | 656, 1193, 2562, 2752 |
| NspV | TTCGAA | 1 cut(s) | 756 |
| PacI | TTAATTAA | 1 cut(s) | 900 |
| PaeI | GCATGC | 2 cut(s) | 1193, 2562 |
| PagI | TCATGA | 2 cut(s) | 1099, 1585 |
| PceI | AGGCCT | 1 cut(s) | 1200 |
| PciI | ACATGT | 2 cut(s) | 652, 2748 |
| PciSI | GCTCTTC | 1 cut(s) | 1121 |
| PctI | GAATGC | 4 cut(s) | 764, 1132, 2465, 3032 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1130, 1353, 1533, 2523, 2685 |
| Pfl23II | CGTACG | 1 cut(s) | 2902 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 69 |
| PfoI | TCCNGGA | 2 cut(s) | 1558, 2157 |
| PinAI | ACCGGT | 1 cut(s) | 346 |
| PleI | GAGTC | 6 cut(s) | 241, 372, 496, 1992, 2556, 2724 |
| PpsI | GAGTC | 6 cut(s) | 241, 372, 496, 1992, 2556, 2724 |
| Ppu21I | YACGTR | 1 cut(s) | 2906 |
| PscI | ACATGT | 2 cut(s) | 652, 2748 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3050 |
| PsiI | TTATAA | 2 cut(s) | 432, 735 |
| Psp124BI | GAGCTC | 1 cut(s) | 1116 |
| Psp1406I | AACGTT | 2 cut(s) | 2658, 2693 |
| Psp6I | CCWGG | 3 cut(s) | 1558, 2860, 2917 |
| PspGI | CCWGG | 3 cut(s) | 1558, 2860, 2917 |
| PspLI | CGTACG | 1 cut(s) | 2902 |
| PspN4I | GGNNCC | 2 cut(s) | 1753, 2209 |
| PspPI | GGNCC | 2 cut(s) | 1145, 1465 |
| PstNI | CAGNNNCTG | 2 cut(s) | 29, 2349 |
| PsuI | RGATCY | 2 cut(s) | 306, 450 |
| PvuII | CAGCTG | 2 cut(s) | 29, 1654 |
| RsaI | GTAC | 6 cut(s) | 583, 1238, 1452, 1650, 2904, 2979 |
| RsaNI | GTAC | 6 cut(s) | 582, 1237, 1451, 1649, 2903, 2978 |
| RseI | CAYNNNNRTG | 4 cut(s) | 170, 522, 1590, 3288 |
| SacI | GAGCTC | 1 cut(s) | 1116 |
| SapI | GCTCTTC | 1 cut(s) | 1121 |
| Sau96I | GGNCC | 2 cut(s) | 1145, 1465 |
| ScaI | AGTACT | 1 cut(s) | 2979 |
| SchI | GAGTC | 6 cut(s) | 242, 373, 496, 1993, 2557, 2724 |
| ScrFI | CCNGG | 5 cut(s) | 1560, 2159, 2251, 2862, 2919 |
| SduI | GDGCHC | 2 cut(s) | 631, 1116 |
| SfaNI | GCATC | 4 cut(s) | 1315, 1488, 2827, 3100 |
| SfcI | CTRYAG | 1 cut(s) | 3048 |
| SfuI | TTCGAA | 1 cut(s) | 756 |
| SinI | GGWCC | 1 cut(s) | 1145 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 170, 522, 1590, 3288 |
| SmlI | CTYRAG | 6 cut(s) | 88, 419, 1109, 1194, 1681, 1777 |
| SmoI | CTYRAG | 6 cut(s) | 88, 419, 1109, 1194, 1681, 1777 |
| SphI | GCATGC | 2 cut(s) | 1193, 2562 |
| SseBI | AGGCCT | 1 cut(s) | 1200 |
| SsiI | CCGC | 7 cut(s) | 1820, 2133, 2211, 2300, 2556, 2825, 3255 |
| SspI | AATATT | 6 cut(s) | 1066, 1410, 2191, 2542, 2685, 3073 |
| SspMI | CTAG | 2 cut(s) | 848, 2754 |
| SstI | GAGCTC | 1 cut(s) | 1116 |
| StuI | AGGCCT | 1 cut(s) | 1200 |
| StyD4I | CCNGG | 5 cut(s) | 1558, 2157, 2249, 2860, 2917 |
| StyI | CCWWGG | 1 cut(s) | 68 |
| TaiI | ACGT | 7 cut(s) | 1308, 1452, 2661, 2696, 2793, 2904, 2908 |
| TatI | WGTACW | 1 cut(s) | 2977 |
| TauI | GCSGC | 2 cut(s) | 1822, 2302 |
| TscAI | CASTG | 5 cut(s) | 1262, 2088, 2350, 2872, 3206 |
| TseFI | GTSAC | 1 cut(s) | 2908 |
| Tsp45I | GTSAC | 1 cut(s) | 2908 |
| TspGWI | ACGGA | 3 cut(s) | 662, 1794, 3237 |
| TspRI | CASTG | 5 cut(s) | 1262, 2088, 2350, 2872, 3206 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 69 |
| Vha464I | CTTAAG | 2 cut(s) | 1681, 1777 |
| VneI | GTGCAC | 1 cut(s) | 627 |
| VpaK11BI | GGWCC | 1 cut(s) | 1145 |
| XceI | RCATGY | 4 cut(s) | 656, 1193, 2562, 2752 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2646 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1130, 1353, 1533, 2523, 2685 |
| XspI | CTAG | 2 cut(s) | 848, 2754 |
| ZraI | GACGTC | 1 cut(s) | 2791 |
| ZrmI | AGTACT | 1 cut(s) | 2979 |
| Zsp2I | ATGCAT | 2 cut(s) | 1330, 2564 |