TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 54 - 222 | 3e-54 | TIR domain |
| TIR_2 | PF13676 | 56 - 151 | 1.1e-14 | TIR domain |
| NB-ARC | PF00931 | 233 - 404 | 1.7e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 473 - 543 | 2.5e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 726 - 840 | 1.2e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 756 - 842 | 1.1e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1094, 1464, 3014 |
| AarI | CACCTGC | 1 cut(s) | 2981 |
| Acc36I | ACCTGC | 1 cut(s) | 2981 |
| AccB1I | GGYRCC | 1 cut(s) | 3232 |
| AccI | GTMKAC | 1 cut(s) | 810 |
| AccII | CGCG | 1 cut(s) | 196 |
| AciI | CCGC | 5 cut(s) | 188, 223, 737, 1030, 3236 |
| AclWI | GGATC | 9 cut(s) | 325, 443, 740, 1044, 1306, 1422, 2267, 2367, 2505 |
| AcoI | YGGCCR | 1 cut(s) | 2191 |
| AcuI | CTGAAG | 3 cut(s) | 163, 998, 2940 |
| AcvI | CACGTG | 1 cut(s) | 2948 |
| AcyI | GRCGYC | 1 cut(s) | 3233 |
| AfaI | GTAC | 3 cut(s) | 221, 1881, 2460 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 101, 229, 1517, 1921, 2189, 3061, 3302 |
| AflII | CTTAAG | 2 cut(s) | 719, 2309 |
| AflIII | ACRYGT | 1 cut(s) | 2668 |
| AgeI | ACCGGT | 1 cut(s) | 2566 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2341 |
| AhlI | ACTAGT | 2 cut(s) | 1247, 2023 |
| AjnI | CCWGG | 2 cut(s) | 477, 849 |
| AleI | CACNNNNGTG | 1 cut(s) | 2001 |
| Alw21I | GWGCWC | 2 cut(s) | 1188, 2953 |
| Alw26I | GTCTC | 6 cut(s) | 1526, 1632, 2201, 2328, 2363, 2433 |
| AlwI | GGATC | 9 cut(s) | 325, 443, 740, 1044, 1306, 1422, 2267, 2367, 2505 |
| AoxI | GGCC | 3 cut(s) | 2006, 2191, 2413 |
| ApaI | GGGCCC | 1 cut(s) | 2010 |
| ApeKI | GCWGC | 6 cut(s) | 548, 563, 1993, 2239, 2514, 2766 |
| AsiGI | ACCGGT | 1 cut(s) | 2566 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1431, 1614, 2553 |
| AspLEI | GCGC | 2 cut(s) | 198, 3235 |
| AspS9I | GGNCC | 6 cut(s) | 475, 1027, 1076, 1924, 2006, 2007 |
| AsuHPI | GGTGA | 5 cut(s) | 491, 497, 2759, 2962, 3311 |
| AvaII | GGWCC | 4 cut(s) | 475, 1027, 1076, 1924 |
| AxyI | CCTNAGG | 1 cut(s) | 1121 |
| BaeGI | GKGCMC | 3 cut(s) | 1984, 2010, 3113 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2442, 2475 |
| BanI | GGYRCC | 1 cut(s) | 3232 |
| BanII | GRGCYC | 3 cut(s) | 1129, 1188, 2010 |
| BauI | CACGAG | 3 cut(s) | 702, 2649, 2793 |
| BbrPI | CACGTG | 1 cut(s) | 2948 |
| BbsI | GAAGAC | 4 cut(s) | 126, 717, 747, 1602 |
| Bbv12I | GWGCWC | 2 cut(s) | 1188, 2953 |
| BbvI | GCAGC | 6 cut(s) | 560, 575, 1980, 2226, 2501, 2753 |
| BccI | CCATC | 6 cut(s) | 35, 587, 2384, 2470, 2654, 3223 |
| BceAI | ACGGC | 4 cut(s) | 1795, 2178, 2898, 2961 |
| BciT130I | CCWGG | 2 cut(s) | 479, 851 |
| BciVI | GTATCC | 1 cut(s) | 184 |
| BcoDI | GTCTC | 6 cut(s) | 1526, 1632, 2201, 2328, 2363, 2433 |
| BcuI | ACTAGT | 2 cut(s) | 1247, 2023 |
| BfaI | CTAG | 3 cut(s) | 1248, 2024, 3278 |
| BfmI | CTRYAG | 2 cut(s) | 2240, 2507 |
| BfoI | RGCGCY | 1 cut(s) | 3236 |
| BfrI | CTTAAG | 2 cut(s) | 719, 2309 |
| BfuAI | ACCTGC | 1 cut(s) | 2981 |
| BfuI | GTATCC | 1 cut(s) | 184 |
| BglII | AGATCT | 2 cut(s) | 390, 1303 |
| BisI | GCNGC | 7 cut(s) | 549, 564, 1994, 2240, 2515, 2767, 3236 |
| BlsI | GCNGC | 7 cut(s) | 550, 565, 1995, 2241, 2516, 2768, 3237 |
| BmcAI | AGTACT | 1 cut(s) | 1881 |
| Bme1390I | CCNGG | 2 cut(s) | 479, 851 |
| Bme18I | GGWCC | 4 cut(s) | 475, 1027, 1076, 1924 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2341 |
| BmgT120I | GGNCC | 6 cut(s) | 475, 1027, 1076, 1924, 2006, 2007 |
| BmiI | GGNNCC | 3 cut(s) | 1925, 2008, 3234 |
| BmrFI | CCNGG | 2 cut(s) | 479, 851 |
| BmsI | GCATC | 4 cut(s) | 365, 478, 1327, 1569 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1624 |
| BpiI | GAAGAC | 4 cut(s) | 126, 717, 747, 1602 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 79, 111 |
| BpmI | CTGGAG | 2 cut(s) | 1077, 2513 |
| Bpu10I | CCTNAGC | 1 cut(s) | 503 |
| BpuEI | CTTGAG | 1 cut(s) | 1709 |
| Bsa29I | ATCGAT | 1 cut(s) | 2226 |
| BsaAI | YACGTR | 2 cut(s) | 1220, 2948 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2502 |
| BsaHI | GRCGYC | 1 cut(s) | 3233 |
| BsaI | GGTCTC | 1 cut(s) | 1526 |
| BsaJI | CCNNGG | 1 cut(s) | 1976 |
| BsaWI | WCCGGW | 1 cut(s) | 2566 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 876, 906, 1881, 1911, 3158, 3188 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 101, 229, 1517, 1921, 2189, 3061, 3302 |
| Bse118I | RCCGGY | 1 cut(s) | 2566 |
| Bse1I | ACTGG | 6 cut(s) | 1870, 1915, 1937, 2416, 2767, 2969 |
| Bse21I | CCTNAGG | 1 cut(s) | 1121 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2502 |
| BseBI | CCWGG | 2 cut(s) | 479, 851 |
| BseCI | ATCGAT | 1 cut(s) | 2226 |
| BseDI | CCNNGG | 1 cut(s) | 1976 |
| BseJI | GATNNNNATC | 1 cut(s) | 2502 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 101, 229, 1517, 1921, 2189, 3061, 3302 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseNI | ACTGG | 6 cut(s) | 1870, 1915, 1937, 2416, 2767, 2969 |
| BseRI | GAGGAG | 5 cut(s) | 43, 291, 2550, 2689, 3179 |
| BseSI | GKGCMC | 3 cut(s) | 1984, 2010, 3113 |
| BseXI | GCAGC | 6 cut(s) | 560, 575, 1980, 2226, 2501, 2753 |
| BseYI | CCCAGC | 1 cut(s) | 3309 |
| BsgI | GTGCAG | 2 cut(s) | 1979, 1996 |
| Bsh1236I | CGCG | 1 cut(s) | 196 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1955 |
| BshFI | GGCC | 3 cut(s) | 2008, 2193, 2415 |
| BshNI | GGYRCC | 1 cut(s) | 3232 |
| BshTI | ACCGGT | 1 cut(s) | 2566 |
| BshVI | ATCGAT | 1 cut(s) | 2226 |
| BsiEI | CGRYCG | 1 cut(s) | 1955 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1188, 2953 |
| BsiSI | CCGG | 2 cut(s) | 2567, 2770 |
| BslFI | GGGAC | 1 cut(s) | 3077 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 101, 229, 1517, 1921, 2189, 3061, 3302 |
| BsmAI | GTCTC | 6 cut(s) | 1526, 1632, 2201, 2328, 2363, 2433 |
| BsmBI | CGTCTC | 1 cut(s) | 2201 |
| BsmFI | GGGAC | 1 cut(s) | 3077 |
| BsmI | GAATGC | 1 cut(s) | 1722 |
| BsnI | GGCC | 3 cut(s) | 2008, 2193, 2415 |
| Bso31I | GGTCTC | 1 cut(s) | 1526 |
| Bsp120I | GGGCCC | 1 cut(s) | 2006 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1129, 1188, 1984, 2010, 2953, 3113 |
| BspACI | CCGC | 5 cut(s) | 188, 223, 737, 1030, 3236 |
| BspANI | GGCC | 3 cut(s) | 2008, 2193, 2415 |
| BspCNI | CTCAG | 1 cut(s) | 78 |
| BspDI | ATCGAT | 1 cut(s) | 2226 |
| BspFNI | CGCG | 1 cut(s) | 196 |
| BspLI | GGNNCC | 3 cut(s) | 1925, 2008, 3234 |
| BspMAI | CTGCAG | 1 cut(s) | 2244 |
| BspMI | ACCTGC | 1 cut(s) | 2981 |
| BspPI | GGATC | 9 cut(s) | 325, 443, 740, 1044, 1306, 1422, 2267, 2367, 2505 |
| BspQI | GCTCTTC | 1 cut(s) | 1193 |
| BspT107I | GGYRCC | 1 cut(s) | 3232 |
| BspTI | CTTAAG | 2 cut(s) | 719, 2309 |
| BspTNI | GGTCTC | 1 cut(s) | 1526 |
| BsrFI | RCCGGY | 1 cut(s) | 2566 |
| BsrI | ACTGG | 6 cut(s) | 1870, 1915, 1937, 2416, 2767, 2969 |
| BssAI | RCCGGY | 1 cut(s) | 2566 |
| BssECI | CCNNGG | 1 cut(s) | 1976 |
| BssNAI | GTATAC | 1 cut(s) | 811 |
| BssNI | GRCGYC | 1 cut(s) | 3233 |
| BssSI | CACGAG | 3 cut(s) | 702, 2649, 2793 |
| Bst1107I | GTATAC | 1 cut(s) | 811 |
| Bst2BI | CACGAG | 3 cut(s) | 702, 2649, 2793 |
| Bst2UI | CCWGG | 2 cut(s) | 479, 851 |
| Bst4CI | ACNGT | 4 cut(s) | 2441, 2511, 2615, 3202 |
| Bst6I | CTCTTC | 5 cut(s) | 121, 127, 1193, 1729, 2822 |
| BstACI | GRCGYC | 1 cut(s) | 3233 |
| BstAFI | CTTAAG | 2 cut(s) | 719, 2309 |
| BstBAI | YACGTR | 2 cut(s) | 1220, 2948 |
| BstDEI | CTNAG | 9 cut(s) | 86, 503, 554, 918, 989, 1009, 1121, 2134, 2363 |
| BstFNI | CGCG | 1 cut(s) | 196 |
| BstH2I | RGCGCY | 1 cut(s) | 3236 |
| BstHHI | GCGC | 2 cut(s) | 198, 3235 |
| BstMAI | GTCTC | 6 cut(s) | 1526, 1632, 2201, 2328, 2363, 2433 |
| BstMCI | CGRYCG | 1 cut(s) | 1955 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 353, 2400 |
| BstNI | CCWGG | 2 cut(s) | 479, 851 |
| BstNSI | RCATGY | 2 cut(s) | 1449, 2672 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1624 |
| BstSCI | CCNGG | 2 cut(s) | 477, 849 |
| BstSFI | CTRYAG | 2 cut(s) | 2240, 2507 |
| BstSLI | GKGCMC | 3 cut(s) | 1984, 2010, 3113 |
| BstSNI | TACGTA | 1 cut(s) | 1220 |
| BstUI | CGCG | 1 cut(s) | 196 |
| BstV1I | GCAGC | 6 cut(s) | 560, 575, 1980, 2226, 2501, 2753 |
| BstV2I | GAAGAC | 4 cut(s) | 126, 717, 747, 1602 |
| BstX2I | RGATCY | 5 cut(s) | 390, 448, 1303, 2359, 2497 |
| BstYI | RGATCY | 5 cut(s) | 390, 448, 1303, 2359, 2497 |
| BstZ17I | GTATAC | 1 cut(s) | 811 |
| Bsu15I | ATCGAT | 1 cut(s) | 2226 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1121 |
| BsuI | GTATCC | 1 cut(s) | 184 |
| BsuRI | GGCC | 3 cut(s) | 2008, 2193, 2415 |
| BsuTUI | ATCGAT | 1 cut(s) | 2226 |
| BtsIMutI | CAGTG | 2 cut(s) | 2409, 2516 |
| BveI | ACCTGC | 1 cut(s) | 2981 |
| CfoI | GCGC | 2 cut(s) | 198, 3235 |
| Cfr10I | RCCGGY | 1 cut(s) | 2566 |
| Cfr13I | GGNCC | 6 cut(s) | 475, 1027, 1076, 1924, 2006, 2007 |
| ClaI | ATCGAT | 1 cut(s) | 2226 |
| CsiI | ACCWGGT | 1 cut(s) | 477 |
| Csp6I | GTAC | 3 cut(s) | 220, 1880, 2459 |
| CspAI | ACCGGT | 1 cut(s) | 2566 |
| CviQI | GTAC | 3 cut(s) | 220, 1880, 2459 |
| DdeI | CTNAG | 9 cut(s) | 86, 503, 554, 918, 989, 1009, 1121, 2134, 2363 |
| DinI | GGCGCC | 1 cut(s) | 3234 |
| DraI | TTTAAA | 1 cut(s) | 1456 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2341 |
| EaeI | YGGCCR | 1 cut(s) | 2191 |
| Eam1104I | CTCTTC | 5 cut(s) | 121, 127, 1193, 1729, 2822 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2341 |
| EarI | CTCTTC | 5 cut(s) | 121, 127, 1193, 1729, 2822 |
| Ecl136II | GAGCTC | 1 cut(s) | 1186 |
| Eco105I | TACGTA | 1 cut(s) | 1220 |
| Eco24I | GRGCYC | 3 cut(s) | 1129, 1188, 2010 |
| Eco31I | GGTCTC | 1 cut(s) | 1526 |
| Eco47I | GGWCC | 4 cut(s) | 475, 1027, 1076, 1924 |
| Eco53kI | GAGCTC | 1 cut(s) | 1186 |
| Eco57I | CTGAAG | 3 cut(s) | 163, 998, 2940 |
| Eco72I | CACGTG | 1 cut(s) | 2948 |
| Eco81I | CCTNAGG | 1 cut(s) | 1121 |
| EcoICRI | GAGCTC | 1 cut(s) | 1186 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1924, 2007 |
| EcoRI | GAATTC | 2 cut(s) | 2106, 2924 |
| EcoRII | CCWGG | 2 cut(s) | 477, 849 |
| EcoT22I | ATGCAT | 3 cut(s) | 358, 1342, 1584 |
| EcoT38I | GRGCYC | 3 cut(s) | 1129, 1188, 2010 |
| EgeI | GGCGCC | 1 cut(s) | 3234 |
| EheI | GGCGCC | 1 cut(s) | 3234 |
| Esp3I | CGTCTC | 1 cut(s) | 2201 |
| FaqI | GGGAC | 1 cut(s) | 3077 |
| FblI | GTMKAC | 1 cut(s) | 810 |
| Fnu4HI | GCNGC | 7 cut(s) | 549, 564, 1994, 2240, 2515, 2767, 3236 |
| FriOI | GRGCYC | 3 cut(s) | 1129, 1188, 2010 |
| Fsp4HI | GCNGC | 7 cut(s) | 549, 564, 1994, 2240, 2515, 2767, 3236 |
| FspBI | CTAG | 3 cut(s) | 1248, 2024, 3278 |
| GlaI | GCGC | 2 cut(s) | 197, 3234 |
| GluI | GCNGC | 7 cut(s) | 549, 564, 1994, 2240, 2515, 2767, 3236 |
| GsaI | CCCAGC | 1 cut(s) | 3313 |
| GsuI | CTGGAG | 2 cut(s) | 1077, 2513 |
| HaeII | RGCGCY | 1 cut(s) | 3236 |
| HaeIII | GGCC | 3 cut(s) | 2008, 2193, 2415 |
| HapII | CCGG | 2 cut(s) | 2567, 2770 |
| HhaI | GCGC | 2 cut(s) | 198, 3235 |
| Hin1I | GRCGYC | 1 cut(s) | 3233 |
| Hin6I | GCGC | 2 cut(s) | 196, 3233 |
| HinP1I | GCGC | 2 cut(s) | 196, 3233 |
| HincII | GTYRAC | 2 cut(s) | 2821, 2892 |
| HindII | GTYRAC | 2 cut(s) | 2821, 2892 |
| HindIII | AAGCTT | 3 cut(s) | 1176, 1786, 2131 |
| HpaII | CCGG | 2 cut(s) | 2567, 2770 |
| HphI | GGTGA | 5 cut(s) | 491, 497, 2759, 2962, 3311 |
| Hpy99I | CGWCG | 1 cut(s) | 457 |
| HpyCH4III | ACNGT | 4 cut(s) | 2441, 2511, 2615, 3202 |
| HpyCH4IV | ACGT | 4 cut(s) | 1219, 1258, 2488, 2947 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 353, 2400 |
| HpyF3I | CTNAG | 9 cut(s) | 86, 503, 554, 918, 989, 1009, 1121, 2134, 2363 |
| HpySE526I | ACGT | 4 cut(s) | 1219, 1258, 2488, 2947 |
| Hsp92I | GRCGYC | 1 cut(s) | 3233 |
| HspAI | GCGC | 2 cut(s) | 196, 3233 |
| KasI | GGCGCC | 1 cut(s) | 3232 |
| LguI | GCTCTTC | 1 cut(s) | 1193 |
| LmnI | GCTCC | 4 cut(s) | 104, 295, 2146, 2956 |
| Lsp1109I | GCAGC | 6 cut(s) | 560, 575, 1980, 2226, 2501, 2753 |
| LweI | GCATC | 4 cut(s) | 365, 478, 1327, 1569 |
| MabI | ACCWGGT | 1 cut(s) | 477 |
| MaeI | CTAG | 3 cut(s) | 1248, 2024, 3278 |
| MaeII | ACGT | 4 cut(s) | 1219, 1258, 2488, 2947 |
| MaeIII | GTNAC | 7 cut(s) | 13, 946, 1397, 1499, 2385, 2527, 3196 |
| MfeI | CAATTG | 2 cut(s) | 492, 3058 |
| MflI | RGATCY | 5 cut(s) | 390, 448, 1303, 2359, 2497 |
| MhlI | GDGCHC | 6 cut(s) | 1129, 1188, 1984, 2010, 2953, 3113 |
| Mly113I | GGCGCC | 1 cut(s) | 3233 |
| MlyI | GAGTC | 5 cut(s) | 10, 1634, 2347, 2552, 2887 |
| MmeI | TCCRAC | 6 cut(s) | 435, 521, 670, 1770, 2561, 2733 |
| Mph1103I | ATGCAT | 3 cut(s) | 358, 1342, 1584 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1431, 1614, 2553 |
| MslI | CAYNNNNRTG | 2 cut(s) | 729, 2001 |
| MspCI | CTTAAG | 2 cut(s) | 719, 2309 |
| MspI | CCGG | 2 cut(s) | 2567, 2770 |
| MspR9I | CCNGG | 2 cut(s) | 479, 851 |
| MunI | CAATTG | 2 cut(s) | 492, 3058 |
| Mva1269I | GAATGC | 1 cut(s) | 1722 |
| MvaI | CCWGG | 2 cut(s) | 479, 851 |
| MvnI | CGCG | 1 cut(s) | 196 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 353, 2400 |
| NarI | GGCGCC | 1 cut(s) | 3233 |
| NlaIV | GGNNCC | 3 cut(s) | 1925, 2008, 3234 |
| NmuCI | GTSAC | 3 cut(s) | 13, 946, 1499 |
| NsiI | ATGCAT | 3 cut(s) | 358, 1342, 1584 |
| NspI | RCATGY | 2 cut(s) | 1449, 2672 |
| OliI | CACNNNNGTG | 1 cut(s) | 2001 |
| PaqCI | CACCTGC | 1 cut(s) | 2981 |
| PciI | ACATGT | 1 cut(s) | 2668 |
| PciSI | GCTCTTC | 1 cut(s) | 1193 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2205 |
| PctI | GAATGC | 1 cut(s) | 1722 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1431, 1614, 2553 |
| PflFI | GACNNNGTC | 1 cut(s) | 2542 |
| PinAI | ACCGGT | 1 cut(s) | 2566 |
| PkrI | GCNGC | 7 cut(s) | 550, 565, 1995, 2241, 2516, 2768, 3237 |
| Ple19I | CGATCG | 1 cut(s) | 1955 |
| PleI | GAGTC | 5 cut(s) | 10, 1633, 2347, 2551, 2887 |
| PluTI | GGCGCC | 1 cut(s) | 3236 |
| PmaCI | CACGTG | 1 cut(s) | 2948 |
| PmlI | CACGTG | 1 cut(s) | 2948 |
| PpsI | GAGTC | 5 cut(s) | 10, 1633, 2347, 2551, 2887 |
| Ppu21I | YACGTR | 2 cut(s) | 1220, 2948 |
| PpuMI | RGGWCCY | 1 cut(s) | 1924 |
| PscI | ACATGT | 1 cut(s) | 2668 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1624 |
| PsiI | TTATAA | 3 cut(s) | 1094, 1464, 3014 |
| Psp124BI | GAGCTC | 1 cut(s) | 1188 |
| Psp5II | RGGWCCY | 1 cut(s) | 1924 |
| Psp6I | CCWGG | 2 cut(s) | 477, 849 |
| PspCI | CACGTG | 1 cut(s) | 2948 |
| PspFI | CCCAGC | 1 cut(s) | 3309 |
| PspGI | CCWGG | 2 cut(s) | 477, 849 |
| PspN4I | GGNNCC | 3 cut(s) | 1925, 2008, 3234 |
| PspOMI | GGGCCC | 1 cut(s) | 2006 |
| PspPI | GGNCC | 6 cut(s) | 475, 1027, 1076, 1924, 2006, 2007 |
| PspPPI | RGGWCCY | 1 cut(s) | 1924 |
| PstI | CTGCAG | 1 cut(s) | 2244 |
| PsuI | RGATCY | 5 cut(s) | 390, 448, 1303, 2359, 2497 |
| PsyI | GACNNNGTC | 1 cut(s) | 2542 |
| PvuI | CGATCG | 1 cut(s) | 1955 |
| RsaI | GTAC | 3 cut(s) | 221, 1881, 2460 |
| RsaNI | GTAC | 3 cut(s) | 220, 1880, 2459 |
| RseI | CAYNNNNRTG | 2 cut(s) | 729, 2001 |
| SacI | GAGCTC | 1 cut(s) | 1188 |
| SapI | GCTCTTC | 1 cut(s) | 1193 |
| SatI | GCNGC | 7 cut(s) | 549, 564, 1994, 2240, 2515, 2767, 3236 |
| Sau96I | GGNCC | 6 cut(s) | 475, 1027, 1076, 1924, 2006, 2007 |
| ScaI | AGTACT | 1 cut(s) | 1881 |
| SchI | GAGTC | 5 cut(s) | 10, 1634, 2347, 2552, 2887 |
| ScrFI | CCNGG | 2 cut(s) | 479, 851 |
| SduI | GDGCHC | 6 cut(s) | 1129, 1188, 1984, 2010, 2953, 3113 |
| SexAI | ACCWGGT | 1 cut(s) | 477 |
| SfaNI | GCATC | 4 cut(s) | 365, 478, 1327, 1569 |
| SfcI | CTRYAG | 2 cut(s) | 2240, 2507 |
| SfoI | GGCGCC | 1 cut(s) | 3234 |
| SinI | GGWCC | 4 cut(s) | 475, 1027, 1076, 1924 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 729, 2001 |
| SmlI | CTYRAG | 3 cut(s) | 719, 1688, 2309 |
| SmoI | CTYRAG | 3 cut(s) | 719, 1688, 2309 |
| SnaBI | TACGTA | 1 cut(s) | 1220 |
| SpeI | ACTAGT | 2 cut(s) | 1247, 2023 |
| SsiI | CCGC | 5 cut(s) | 188, 223, 737, 1030, 3236 |
| SspDI | GGCGCC | 1 cut(s) | 3232 |
| SspI | AATATT | 2 cut(s) | 435, 859 |
| SspMI | CTAG | 3 cut(s) | 1248, 2024, 3278 |
| SstI | GAGCTC | 1 cut(s) | 1188 |
| StyD4I | CCNGG | 2 cut(s) | 477, 849 |
| TaaI | ACNGT | 4 cut(s) | 2441, 2511, 2615, 3202 |
| TaiI | ACGT | 4 cut(s) | 1222, 1261, 2491, 2950 |
| TatI | WGTACW | 1 cut(s) | 1879 |
| TauI | GCSGC | 1 cut(s) | 3238 |
| TscAI | CASTG | 2 cut(s) | 2416, 2516 |
| TseFI | GTSAC | 3 cut(s) | 13, 946, 1499 |
| TseI | GCWGC | 6 cut(s) | 548, 563, 1993, 2239, 2514, 2766 |
| Tsp45I | GTSAC | 3 cut(s) | 13, 946, 1499 |
| TspGWI | ACGGA | 5 cut(s) | 441, 1266, 1721, 1857, 1976 |
| TspRI | CASTG | 2 cut(s) | 2416, 2516 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2542 |
| Vha464I | CTTAAG | 2 cut(s) | 719, 2309 |
| VpaK11BI | GGWCC | 4 cut(s) | 475, 1027, 1076, 1924 |
| XceI | RCATGY | 2 cut(s) | 1449, 2672 |
| XmiI | GTMKAC | 1 cut(s) | 810 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1431, 1614, 2553 |
| XspI | CTAG | 3 cut(s) | 1248, 2024, 3278 |
| ZrmI | AGTACT | 1 cut(s) | 1881 |
| Zsp2I | ATGCAT | 3 cut(s) | 358, 1342, 1584 |