TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 381 |
| Acc36I | ACCTGC | 1 cut(s) | 864 |
| AccB1I | GGYRCC | 2 cut(s) | 642, 946 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 692 |
| AccI | GTMKAC | 1 cut(s) | 94 |
| AccII | CGCG | 3 cut(s) | 812, 852, 912 |
| AciI | CCGC | 3 cut(s) | 859, 869, 920 |
| AclWI | GGATC | 6 cut(s) | 210, 279, 389, 533, 682, 729 |
| AcoI | YGGCCR | 1 cut(s) | 507 |
| AcuI | CTGAAG | 1 cut(s) | 546 |
| AcvI | CACGTG | 1 cut(s) | 522 |
| AcyI | GRCGYC | 1 cut(s) | 947 |
| AfaI | GTAC | 1 cut(s) | 135 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 622, 692, 906, 934 |
| AgsI | TTSAA | 8 cut(s) | 362, 407, 433, 440, 516, 581, 738, 774 |
| AjiI | CACGTC | 1 cut(s) | 805 |
| AjnI | CCWGG | 4 cut(s) | 615, 629, 637, 645 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 299, 331 |
| AluBI | AGCT | 5 cut(s) | 56, 64, 161, 333, 566 |
| AluI | AGCT | 5 cut(s) | 56, 64, 161, 333, 566 |
| AlwI | GGATC | 6 cut(s) | 210, 279, 389, 533, 682, 729 |
| AoxI | GGCC | 2 cut(s) | 507, 936 |
| ApeKI | GCWGC | 1 cut(s) | 574 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 80, 247, 659 |
| AspLEI | GCGC | 4 cut(s) | 812, 814, 912, 949 |
| AspS9I | GGNCC | 3 cut(s) | 748, 761, 936 |
| AsuHPI | GGTGA | 7 cut(s) | 494, 529, 593, 605, 619, 627, 886 |
| AvaII | GGWCC | 2 cut(s) | 748, 761 |
| BaeGI | GKGCMC | 1 cut(s) | 645 |
| BalI | TGGCCA | 1 cut(s) | 509 |
| BanI | GGYRCC | 2 cut(s) | 642, 946 |
| BauI | CACGAG | 1 cut(s) | 164 |
| BbrPI | CACGTG | 1 cut(s) | 522 |
| BbsI | GAAGAC | 2 cut(s) | 73, 882 |
| BbvI | GCAGC | 1 cut(s) | 561 |
| BciT130I | CCWGG | 4 cut(s) | 617, 631, 639, 647 |
| BfaI | CTAG | 5 cut(s) | 348, 551, 797, 872, 952 |
| BfmI | CTRYAG | 1 cut(s) | 499 |
| BfoI | RGCGCY | 1 cut(s) | 950 |
| BfuAI | ACCTGC | 1 cut(s) | 864 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 944 |
| BglII | AGATCT | 2 cut(s) | 364, 753 |
| BisI | GCNGC | 2 cut(s) | 575, 860 |
| BlsI | GCNGC | 2 cut(s) | 576, 861 |
| Bme1390I | CCNGG | 4 cut(s) | 617, 631, 639, 647 |
| Bme18I | GGWCC | 2 cut(s) | 748, 761 |
| BmgBI | CACGTC | 1 cut(s) | 805 |
| BmgT120I | GGNCC | 3 cut(s) | 748, 761, 936 |
| BmiI | GGNNCC | 2 cut(s) | 644, 948 |
| BmrFI | CCNGG | 4 cut(s) | 617, 631, 639, 647 |
| BpiI | GAAGAC | 2 cut(s) | 73, 882 |
| BpuEI | CTTGAG | 1 cut(s) | 129 |
| BsaAI | YACGTR | 1 cut(s) | 522 |
| BsaHI | GRCGYC | 1 cut(s) | 947 |
| BsaJI | CCNNGG | 3 cut(s) | 638, 646, 905 |
| BsaWI | WCCGGW | 2 cut(s) | 671, 828 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 622, 692, 906, 934 |
| Bse1I | ACTGG | 2 cut(s) | 123, 398 |
| BseBI | CCWGG | 4 cut(s) | 617, 631, 639, 647 |
| BseDI | CCNNGG | 3 cut(s) | 638, 646, 905 |
| BseGI | GGATG | 1 cut(s) | 462 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 622, 692, 906, 934 |
| BseMII | CTCAG | 1 cut(s) | 382 |
| BseNI | ACTGG | 2 cut(s) | 123, 398 |
| BsePI | GCGCGC | 1 cut(s) | 810 |
| BseSI | GKGCMC | 1 cut(s) | 645 |
| BseXI | GCAGC | 1 cut(s) | 561 |
| Bsh1236I | CGCG | 3 cut(s) | 812, 852, 912 |
| BshFI | GGCC | 2 cut(s) | 509, 938 |
| BshNI | GGYRCC | 2 cut(s) | 642, 946 |
| BsiSI | CCGG | 2 cut(s) | 672, 829 |
| BslFI | GGGAC | 1 cut(s) | 850 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 622, 692, 906, 934 |
| BsmFI | GGGAC | 1 cut(s) | 850 |
| BsnI | GGCC | 2 cut(s) | 509, 938 |
| Bsp1286I | GDGCHC | 1 cut(s) | 645 |
| Bsp143I | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| BspACI | CCGC | 3 cut(s) | 859, 869, 920 |
| BspANI | GGCC | 2 cut(s) | 509, 938 |
| BspCNI | CTCAG | 1 cut(s) | 381 |
| BspFNI | CGCG | 3 cut(s) | 812, 852, 912 |
| BspHI | TCATGA | 1 cut(s) | 414 |
| BspLI | GGNNCC | 2 cut(s) | 644, 948 |
| BspMI | ACCTGC | 1 cut(s) | 864 |
| BspPI | GGATC | 6 cut(s) | 210, 279, 389, 533, 682, 729 |
| BspQI | GCTCTTC | 1 cut(s) | 480 |
| BspT107I | GGYRCC | 2 cut(s) | 642, 946 |
| BsrI | ACTGG | 2 cut(s) | 123, 398 |
| BssECI | CCNNGG | 3 cut(s) | 638, 646, 905 |
| BssHII | GCGCGC | 1 cut(s) | 810 |
| BssMI | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| BssNI | GRCGYC | 1 cut(s) | 947 |
| BssSI | CACGAG | 1 cut(s) | 164 |
| BssT1I | CCWWGG | 1 cut(s) | 905 |
| Bst2BI | CACGAG | 1 cut(s) | 164 |
| Bst2UI | CCWGG | 4 cut(s) | 617, 631, 639, 647 |
| Bst4CI | ACNGT | 6 cut(s) | 217, 313, 625, 717, 765, 840 |
| Bst6I | CTCTTC | 2 cut(s) | 238, 480 |
| BstACI | GRCGYC | 1 cut(s) | 947 |
| BstBAI | YACGTR | 1 cut(s) | 522 |
| BstC8I | GCNNGC | 2 cut(s) | 812, 945 |
| BstDEI | CTNAG | 2 cut(s) | 368, 589 |
| BstEII | GGTNACC | 3 cut(s) | 611, 625, 633 |
| BstF5I | GGATG | 1 cut(s) | 462 |
| BstFNI | CGCG | 3 cut(s) | 812, 852, 912 |
| BstH2I | RGCGCY | 1 cut(s) | 950 |
| BstHHI | GCGC | 4 cut(s) | 812, 814, 912, 949 |
| BstKTI | GATC | 8 cut(s) | 205, 274, 367, 397, 528, 677, 724, 756 |
| BstMBI | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 128, 868, 944 |
| BstNI | CCWGG | 4 cut(s) | 617, 631, 639, 647 |
| BstPI | GGTNACC | 3 cut(s) | 611, 625, 633 |
| BstSCI | CCNGG | 4 cut(s) | 615, 629, 637, 645 |
| BstSFI | CTRYAG | 1 cut(s) | 499 |
| BstSLI | GKGCMC | 1 cut(s) | 645 |
| BstUI | CGCG | 3 cut(s) | 812, 852, 912 |
| BstV1I | GCAGC | 1 cut(s) | 561 |
| BstV2I | GAAGAC | 2 cut(s) | 73, 882 |
| BstX2I | RGATCY | 6 cut(s) | 271, 364, 394, 525, 674, 753 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 758, 792 |
| BstYI | RGATCY | 6 cut(s) | 271, 364, 394, 525, 674, 753 |
| BsuRI | GGCC | 2 cut(s) | 509, 938 |
| BtrI | CACGTC | 1 cut(s) | 805 |
| BtsCI | GGATG | 1 cut(s) | 462 |
| BtsI | GCAGTG | 1 cut(s) | 663 |
| BtsIMutI | CAGTG | 3 cut(s) | 231, 405, 663 |
| BveI | ACCTGC | 1 cut(s) | 864 |
| Cac8I | GCNNGC | 2 cut(s) | 812, 945 |
| CciI | TCATGA | 1 cut(s) | 414 |
| CfoI | GCGC | 4 cut(s) | 812, 814, 912, 949 |
| Cfr13I | GGNCC | 3 cut(s) | 748, 761, 936 |
| CseI | GACGC | 2 cut(s) | 898, 901 |
| CsiI | ACCWGGT | 2 cut(s) | 615, 629 |
| Csp6I | GTAC | 1 cut(s) | 134 |
| CviAII | CATG | 3 cut(s) | 415, 466, 817 |
| CviQI | GTAC | 1 cut(s) | 134 |
| DdeI | CTNAG | 2 cut(s) | 368, 589 |
| DinI | GGCGCC | 1 cut(s) | 948 |
| DpnI | GATC | 8 cut(s) | 204, 273, 366, 396, 527, 676, 723, 755 |
| DpnII | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| EaeI | YGGCCR | 1 cut(s) | 507 |
| Eam1104I | CTCTTC | 2 cut(s) | 238, 480 |
| EarI | CTCTTC | 2 cut(s) | 238, 480 |
| Eco130I | CCWWGG | 1 cut(s) | 905 |
| Eco47I | GGWCC | 2 cut(s) | 748, 761 |
| Eco57I | CTGAAG | 1 cut(s) | 546 |
| Eco72I | CACGTG | 1 cut(s) | 522 |
| Eco91I | GGTNACC | 3 cut(s) | 611, 625, 633 |
| EcoO65I | GGTNACC | 3 cut(s) | 611, 625, 633 |
| EcoRII | CCWGG | 4 cut(s) | 615, 629, 637, 645 |
| EcoT14I | CCWWGG | 1 cut(s) | 905 |
| EgeI | GGCGCC | 1 cut(s) | 948 |
| EheI | GGCGCC | 1 cut(s) | 948 |
| ErhI | CCWWGG | 1 cut(s) | 905 |
| FaeI | CATG | 3 cut(s) | 418, 469, 820 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 82, 114 |
| FaqI | GGGAC | 1 cut(s) | 850 |
| FatI | CATG | 3 cut(s) | 414, 465, 816 |
| FauI | CCCGC | 1 cut(s) | 876 |
| FblI | GTMKAC | 1 cut(s) | 94 |
| Fnu4HI | GCNGC | 2 cut(s) | 575, 860 |
| FokI | GGATG | 1 cut(s) | 469 |
| Fsp4HI | GCNGC | 2 cut(s) | 575, 860 |
| FspBI | CTAG | 5 cut(s) | 348, 551, 797, 872, 952 |
| GlaI | GCGC | 4 cut(s) | 811, 813, 911, 948 |
| GluI | GCNGC | 2 cut(s) | 575, 860 |
| HaeII | RGCGCY | 1 cut(s) | 950 |
| HaeIII | GGCC | 2 cut(s) | 509, 938 |
| HapII | CCGG | 2 cut(s) | 672, 829 |
| HgaI | GACGC | 2 cut(s) | 898, 901 |
| HhaI | GCGC | 4 cut(s) | 812, 814, 912, 949 |
| Hin1I | GRCGYC | 1 cut(s) | 947 |
| Hin1II | CATG | 3 cut(s) | 418, 469, 820 |
| Hin6I | GCGC | 4 cut(s) | 810, 812, 910, 947 |
| HinP1I | GCGC | 4 cut(s) | 810, 812, 910, 947 |
| HincII | GTYRAC | 1 cut(s) | 16 |
| HindII | GTYRAC | 1 cut(s) | 16 |
| HindIII | AAGCTT | 1 cut(s) | 54 |
| HinfI | GANTC | 1 cut(s) | 734 |
| HpaII | CCGG | 2 cut(s) | 672, 829 |
| HphI | GGTGA | 7 cut(s) | 494, 529, 593, 605, 619, 627, 886 |
| Hpy166II | GTNNAC | 7 cut(s) | 16, 95, 179, 194, 601, 761, 802 |
| Hpy188I | TCNGA | 3 cut(s) | 106, 276, 371 |
| Hpy188III | TCNNGA | 3 cut(s) | 415, 551, 751 |
| Hpy8I | GTNNAC | 7 cut(s) | 16, 95, 179, 194, 601, 761, 802 |
| HpyAV | CCTTC | 1 cut(s) | 108 |
| HpyCH4III | ACNGT | 6 cut(s) | 217, 313, 625, 717, 765, 840 |
| HpyCH4IV | ACGT | 2 cut(s) | 521, 804 |
| HpyCH4V | TGCA | 1 cut(s) | 386 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 128, 868, 944 |
| HpyF3I | CTNAG | 2 cut(s) | 368, 589 |
| HpySE526I | ACGT | 2 cut(s) | 521, 804 |
| Hsp92I | GRCGYC | 1 cut(s) | 947 |
| Hsp92II | CATG | 3 cut(s) | 418, 469, 820 |
| HspAI | GCGC | 4 cut(s) | 810, 812, 910, 947 |
| KasI | GGCGCC | 1 cut(s) | 946 |
| Kzo9I | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| LguI | GCTCTTC | 1 cut(s) | 480 |
| Lsp1109I | GCAGC | 1 cut(s) | 561 |
| MabI | ACCWGGT | 2 cut(s) | 615, 629 |
| MaeI | CTAG | 5 cut(s) | 348, 551, 797, 872, 952 |
| MaeII | ACGT | 2 cut(s) | 521, 804 |
| MaeIII | GTNAC | 5 cut(s) | 611, 619, 625, 633, 842 |
| MalI | GATC | 8 cut(s) | 204, 273, 366, 396, 527, 676, 723, 755 |
| MboI | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| MflI | RGATCY | 6 cut(s) | 271, 364, 394, 525, 674, 753 |
| MhlI | GDGCHC | 1 cut(s) | 645 |
| MlsI | TGGCCA | 1 cut(s) | 509 |
| MluCI | AATT | 1 cut(s) | 283 |
| MluNI | TGGCCA | 1 cut(s) | 509 |
| Mly113I | GGCGCC | 1 cut(s) | 947 |
| MmeI | TCCRAC | 2 cut(s) | 53, 699 |
| MnlI | CCTC | 5 cut(s) | 106, 262, 435, 501, 907 |
| Mox20I | TGGCCA | 1 cut(s) | 509 |
| MroXI | GAANNNNTTC | 3 cut(s) | 80, 247, 659 |
| MscI | TGGCCA | 1 cut(s) | 509 |
| MseI | TTAA | 1 cut(s) | 41 |
| Msp20I | TGGCCA | 1 cut(s) | 509 |
| MspI | CCGG | 2 cut(s) | 672, 829 |
| MspR9I | CCNGG | 4 cut(s) | 617, 631, 639, 647 |
| MvaI | CCWGG | 4 cut(s) | 617, 631, 639, 647 |
| MvnI | CGCG | 3 cut(s) | 812, 852, 912 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 128, 868, 944 |
| NarI | GGCGCC | 1 cut(s) | 947 |
| NdeII | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| NlaIII | CATG | 3 cut(s) | 418, 469, 820 |
| NlaIV | GGNNCC | 2 cut(s) | 644, 948 |
| NmuCI | GTSAC | 4 cut(s) | 611, 619, 625, 633 |
| PagI | TCATGA | 1 cut(s) | 414 |
| PauI | GCGCGC | 1 cut(s) | 810 |
| PciSI | GCTCTTC | 1 cut(s) | 480 |
| PdmI | GAANNNNTTC | 3 cut(s) | 80, 247, 659 |
| PfeI | GAWTC | 1 cut(s) | 734 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 692 |
| PkrI | GCNGC | 2 cut(s) | 576, 861 |
| PluTI | GGCGCC | 1 cut(s) | 950 |
| PmaCI | CACGTG | 1 cut(s) | 522 |
| PmlI | CACGTG | 1 cut(s) | 522 |
| Ppu21I | YACGTR | 1 cut(s) | 522 |
| PsiI | TTATAA | 1 cut(s) | 381 |
| Psp6I | CCWGG | 4 cut(s) | 615, 629, 637, 645 |
| PspCI | CACGTG | 1 cut(s) | 522 |
| PspEI | GGTNACC | 3 cut(s) | 611, 625, 633 |
| PspGI | CCWGG | 4 cut(s) | 615, 629, 637, 645 |
| PspN4I | GGNNCC | 2 cut(s) | 644, 948 |
| PspPI | GGNCC | 3 cut(s) | 748, 761, 936 |
| PsuI | RGATCY | 6 cut(s) | 271, 364, 394, 525, 674, 753 |
| PteI | GCGCGC | 1 cut(s) | 810 |
| RsaI | GTAC | 1 cut(s) | 135 |
| RsaNI | GTAC | 1 cut(s) | 134 |
| SapI | GCTCTTC | 1 cut(s) | 480 |
| SaqAI | TTAA | 1 cut(s) | 41 |
| SatI | GCNGC | 2 cut(s) | 575, 860 |
| Sau3AI | GATC | 8 cut(s) | 202, 271, 364, 394, 525, 674, 721, 753 |
| Sau96I | GGNCC | 3 cut(s) | 748, 761, 936 |
| ScrFI | CCNGG | 4 cut(s) | 617, 631, 639, 647 |
| SduI | GDGCHC | 1 cut(s) | 645 |
| SexAI | ACCWGGT | 2 cut(s) | 615, 629 |
| SfcI | CTRYAG | 1 cut(s) | 499 |
| SfoI | GGCGCC | 1 cut(s) | 948 |
| SinI | GGWCC | 2 cut(s) | 748, 761 |
| SmlI | CTYRAG | 1 cut(s) | 144 |
| SmoI | CTYRAG | 1 cut(s) | 144 |
| Sse9I | AATT | 1 cut(s) | 283 |
| SsiI | CCGC | 3 cut(s) | 859, 869, 920 |
| SspDI | GGCGCC | 1 cut(s) | 946 |
| SspI | AATATT | 1 cut(s) | 436 |
| SspMI | CTAG | 5 cut(s) | 348, 551, 797, 872, 952 |
| StyD4I | CCNGG | 4 cut(s) | 615, 629, 637, 645 |
| StyI | CCWWGG | 1 cut(s) | 905 |
| TaaI | ACNGT | 6 cut(s) | 217, 313, 625, 717, 765, 840 |
| TaiI | ACGT | 2 cut(s) | 524, 807 |
| TasI | AATT | 1 cut(s) | 283 |
| TauI | GCSGC | 1 cut(s) | 862 |
| TfiI | GAWTC | 1 cut(s) | 734 |
| Tru1I | TTAA | 1 cut(s) | 41 |
| Tru9I | TTAA | 1 cut(s) | 41 |
| TscAI | CASTG | 3 cut(s) | 231, 405, 670 |
| TseFI | GTSAC | 4 cut(s) | 611, 619, 625, 633 |
| TseI | GCWGC | 1 cut(s) | 574 |
| Tsp45I | GTSAC | 4 cut(s) | 611, 619, 625, 633 |
| TspDTI | ATGAA | 5 cut(s) | 42, 66, 90, 431, 794 |
| TspGWI | ACGGA | 1 cut(s) | 905 |
| TspRI | CASTG | 3 cut(s) | 231, 405, 670 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 692 |
| VpaK11BI | GGWCC | 2 cut(s) | 748, 761 |
| XbaI | TCTAGA | 1 cut(s) | 550 |
| XmiI | GTMKAC | 1 cut(s) | 94 |
| XmnI | GAANNNNTTC | 3 cut(s) | 80, 247, 659 |
| XspI | CTAG | 5 cut(s) | 348, 551, 797, 872, 952 |