TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 49 - 146 | 1.9e-06 | Leucine-rich repeat region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 47 |
| AclWI | GGATC | 1 cut(s) | 192 |
| AcsI | RAATTY | 2 cut(s) | 4, 20 |
| AcuI | CTGAAG | 1 cut(s) | 515 |
| AfaI | GTAC | 2 cut(s) | 75, 388 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 207 |
| AgsI | TTSAA | 4 cut(s) | 145, 206, 350, 358 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 504, 536 |
| AluBI | AGCT | 1 cut(s) | 166 |
| AluI | AGCT | 1 cut(s) | 166 |
| Alw21I | GWGCWC | 1 cut(s) | 161 |
| AlwI | GGATC | 1 cut(s) | 192 |
| Ama87I | CYCGRG | 1 cut(s) | 236 |
| Aor13HI | TCCGGA | 1 cut(s) | 47 |
| ApoI | RAATTY | 2 cut(s) | 4, 20 |
| AsuHPI | GGTGA | 2 cut(s) | 452, 490 |
| AvaI | CYCGRG | 1 cut(s) | 236 |
| BauI | CACGAG | 1 cut(s) | 455 |
| Bbv12I | GWGCWC | 1 cut(s) | 161 |
| BccI | CCATC | 1 cut(s) | 262 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 217, 251 |
| BglII | AGATCT | 1 cut(s) | 418 |
| BmeT110I | CYCGRG | 1 cut(s) | 236 |
| BsaWI | WCCGGW | 1 cut(s) | 47 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 207 |
| BseAI | TCCGGA | 1 cut(s) | 47 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 207 |
| BsiHKAI | GWGCWC | 1 cut(s) | 161 |
| BsiHKCI | CYCGRG | 1 cut(s) | 236 |
| BsiSI | CCGG | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 207 |
| BsmI | GAATGC | 1 cut(s) | 449 |
| BsoBI | CYCGRG | 1 cut(s) | 236 |
| Bsp1286I | GDGCHC | 1 cut(s) | 161 |
| Bsp13I | TCCGGA | 1 cut(s) | 47 |
| Bsp143I | GATC | 2 cut(s) | 197, 418 |
| BspEI | TCCGGA | 1 cut(s) | 47 |
| BspPI | GGATC | 1 cut(s) | 192 |
| BssMI | GATC | 2 cut(s) | 197, 418 |
| BssSI | CACGAG | 1 cut(s) | 455 |
| Bst2BI | CACGAG | 1 cut(s) | 455 |
| Bst6I | CTCTTC | 1 cut(s) | 252 |
| BstDEI | CTNAG | 3 cut(s) | 25, 77, 162 |
| BstKTI | GATC | 2 cut(s) | 200, 421 |
| BstMBI | GATC | 2 cut(s) | 197, 418 |
| BstX2I | RGATCY | 2 cut(s) | 197, 418 |
| BstYI | RGATCY | 2 cut(s) | 197, 418 |
| Csp6I | GTAC | 2 cut(s) | 74, 387 |
| CviJI | RGCY | 5 cut(s) | 54, 166, 211, 235, 346 |
| CviKI_1 | RGCY | 5 cut(s) | 54, 166, 211, 235, 346 |
| CviQI | GTAC | 2 cut(s) | 74, 387 |
| DdeI | CTNAG | 3 cut(s) | 25, 77, 162 |
| DpnI | GATC | 2 cut(s) | 199, 420 |
| DpnII | GATC | 2 cut(s) | 197, 418 |
| Eam1104I | CTCTTC | 1 cut(s) | 252 |
| EarI | CTCTTC | 1 cut(s) | 252 |
| Eco57I | CTGAAG | 1 cut(s) | 515 |
| Eco88I | CYCGRG | 1 cut(s) | 236 |
| FaiI | YATR | 6 cut(s) | 293, 308, 402, 404, 406, 408 |
| HapII | CCGG | 1 cut(s) | 48 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HinfI | GANTC | 6 cut(s) | 120, 145, 243, 272, 424, 520 |
| HpaII | CCGG | 1 cut(s) | 48 |
| HphI | GGTGA | 2 cut(s) | 452, 490 |
| Hpy166II | GTNNAC | 3 cut(s) | 139, 376, 433 |
| Hpy188I | TCNGA | 5 cut(s) | 11, 423, 519, 525, 534 |
| Hpy188III | TCNNGA | 3 cut(s) | 48, 238, 457 |
| Hpy8I | GTNNAC | 3 cut(s) | 139, 376, 433 |
| HpyAV | CCTTC | 1 cut(s) | 330 |
| HpyCH4V | TGCA | 5 cut(s) | 18, 179, 228, 415, 504 |
| HpyF3I | CTNAG | 3 cut(s) | 25, 77, 162 |
| Kpn2I | TCCGGA | 1 cut(s) | 47 |
| Kzo9I | GATC | 2 cut(s) | 197, 418 |
| LpnPI | CCDG | 3 cut(s) | 61, 369, 413 |
| MaeIII | GTNAC | 1 cut(s) | 457 |
| MalI | GATC | 2 cut(s) | 199, 420 |
| MboI | GATC | 2 cut(s) | 197, 418 |
| MboII | GAAGA | 2 cut(s) | 269, 481 |
| MfeI | CAATTG | 1 cut(s) | 327 |
| MflI | RGATCY | 2 cut(s) | 197, 418 |
| MhlI | GDGCHC | 1 cut(s) | 161 |
| MluCI | AATT | 4 cut(s) | 4, 20, 314, 327 |
| MmeI | TCCRAC | 1 cut(s) | 97 |
| MnlI | CCTC | 4 cut(s) | 5, 94, 165, 253 |
| MroI | TCCGGA | 1 cut(s) | 47 |
| MseI | TTAA | 1 cut(s) | 150 |
| MslI | CAYNNNNRTG | 1 cut(s) | 405 |
| MspI | CCGG | 1 cut(s) | 48 |
| MunI | CAATTG | 1 cut(s) | 327 |
| Mva1269I | GAATGC | 1 cut(s) | 449 |
| NdeII | GATC | 2 cut(s) | 197, 418 |
| NmuCI | GTSAC | 1 cut(s) | 457 |
| PaeR7I | CTCGAG | 1 cut(s) | 236 |
| PctI | GAATGC | 1 cut(s) | 449 |
| PfeI | GAWTC | 6 cut(s) | 120, 145, 243, 272, 424, 520 |
| PsuI | RGATCY | 2 cut(s) | 197, 418 |
| RsaI | GTAC | 2 cut(s) | 75, 388 |
| RsaNI | GTAC | 2 cut(s) | 74, 387 |
| RseI | CAYNNNNRTG | 1 cut(s) | 405 |
| SaqAI | TTAA | 1 cut(s) | 150 |
| Sau3AI | GATC | 2 cut(s) | 197, 418 |
| SduI | GDGCHC | 1 cut(s) | 161 |
| SetI | ASST | 9 cut(s) | 16, 105, 168, 176, 226, 381, 388, 432, 480 |
| Sfr274I | CTCGAG | 1 cut(s) | 236 |
| SlaI | CTCGAG | 1 cut(s) | 236 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 405 |
| SmlI | CTYRAG | 1 cut(s) | 236 |
| SmoI | CTYRAG | 1 cut(s) | 236 |
| Sse9I | AATT | 4 cut(s) | 4, 20, 314, 327 |
| TaqI | TCGA | 1 cut(s) | 237 |
| TasI | AATT | 4 cut(s) | 4, 20, 314, 327 |
| TfiI | GAWTC | 6 cut(s) | 120, 145, 243, 272, 424, 520 |
| Tru1I | TTAA | 1 cut(s) | 150 |
| Tru9I | TTAA | 1 cut(s) | 150 |
| TseFI | GTSAC | 1 cut(s) | 457 |
| Tsp45I | GTSAC | 1 cut(s) | 457 |
| TspDTI | ATGAA | 5 cut(s) | 17, 312, 381, 486, 504 |
| TspGWI | ACGGA | 1 cut(s) | 296 |
| XapI | RAATTY | 2 cut(s) | 4, 20 |
| XhoI | CTCGAG | 1 cut(s) | 236 |