TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 111 |
| AclWI | GGATC | 4 cut(s) | 35, 48, 410, 423 |
| AcsI | RAATTY | 2 cut(s) | 291, 538 |
| AcuI | CTGAAG | 1 cut(s) | 581 |
| AfaI | GTAC | 1 cut(s) | 429 |
| AfeI | AGCGCT | 1 cut(s) | 264 |
| AflIII | ACRYGT | 1 cut(s) | 109 |
| AgsI | TTSAA | 4 cut(s) | 281, 297, 506, 528 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 432, 464 |
| AluBI | AGCT | 1 cut(s) | 492 |
| AluI | AGCT | 1 cut(s) | 492 |
| Alw21I | GWGCWC | 1 cut(s) | 494 |
| AlwI | GGATC | 4 cut(s) | 35, 48, 410, 423 |
| Aor51HI | AGCGCT | 1 cut(s) | 264 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 1 cut(s) | 533 |
| ApoI | RAATTY | 2 cut(s) | 291, 538 |
| AspLEI | GCGC | 1 cut(s) | 265 |
| AsuHPI | GGTGA | 1 cut(s) | 464 |
| BamHI | GGATCC | 2 cut(s) | 40, 415 |
| BanII | GRGCYC | 1 cut(s) | 494 |
| BbsI | GAAGAC | 1 cut(s) | 59 |
| Bbv12I | GWGCWC | 1 cut(s) | 494 |
| BbvI | GCAGC | 1 cut(s) | 545 |
| BciVI | GTATCC | 1 cut(s) | 151 |
| BfaI | CTAG | 2 cut(s) | 341, 579 |
| BfoI | RGCGCY | 1 cut(s) | 266 |
| BfuI | GTATCC | 1 cut(s) | 151 |
| BisI | GCNGC | 1 cut(s) | 534 |
| BlsI | GCNGC | 1 cut(s) | 535 |
| BmiI | GGNNCC | 3 cut(s) | 42, 89, 417 |
| BmsI | GCATC | 1 cut(s) | 332 |
| BpiI | GAAGAC | 1 cut(s) | 59 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 252, 284 |
| BpuEI | CTTGAG | 1 cut(s) | 383 |
| BsaBI | GATNNNNATC | 1 cut(s) | 231 |
| Bse118I | RCCGGY | 1 cut(s) | 84 |
| Bse1I | ACTGG | 2 cut(s) | 393, 398 |
| Bse8I | GATNNNNATC | 1 cut(s) | 231 |
| BseGI | GGATG | 2 cut(s) | 232, 323 |
| BseJI | GATNNNNATC | 1 cut(s) | 231 |
| BseMII | CTCAG | 1 cut(s) | 507 |
| BseNI | ACTGG | 2 cut(s) | 393, 398 |
| BseRI | GAGGAG | 1 cut(s) | 258 |
| BseXI | GCAGC | 1 cut(s) | 545 |
| BsgI | GTGCAG | 1 cut(s) | 208 |
| Bsh1236I | CGCG | 1 cut(s) | 111 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiHKAI | GWGCWC | 1 cut(s) | 494 |
| BsiSI | CCGG | 1 cut(s) | 85 |
| BsnI | GGCC | 1 cut(s) | 180 |
| Bsp1286I | GDGCHC | 1 cut(s) | 494 |
| Bsp143I | GATC | 3 cut(s) | 40, 232, 415 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspCNI | CTCAG | 1 cut(s) | 506 |
| BspFNI | CGCG | 1 cut(s) | 111 |
| BspHI | TCATGA | 1 cut(s) | 469 |
| BspLI | GGNNCC | 3 cut(s) | 42, 89, 417 |
| BspPI | GGATC | 4 cut(s) | 35, 48, 410, 423 |
| BsrFI | RCCGGY | 1 cut(s) | 84 |
| BsrI | ACTGG | 2 cut(s) | 393, 398 |
| BssAI | RCCGGY | 1 cut(s) | 84 |
| BssMI | GATC | 3 cut(s) | 40, 232, 415 |
| Bst4CI | ACNGT | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 1 cut(s) | 86 |
| BstDEI | CTNAG | 1 cut(s) | 493 |
| BstF5I | GGATG | 2 cut(s) | 232, 323 |
| BstFNI | CGCG | 1 cut(s) | 111 |
| BstH2I | RGCGCY | 1 cut(s) | 266 |
| BstHHI | GCGC | 1 cut(s) | 265 |
| BstKTI | GATC | 3 cut(s) | 43, 235, 418 |
| BstMBI | GATC | 3 cut(s) | 40, 232, 415 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 186 |
| BstNSI | RCATGY | 1 cut(s) | 428 |
| BstUI | CGCG | 1 cut(s) | 111 |
| BstV1I | GCAGC | 1 cut(s) | 545 |
| BstV2I | GAAGAC | 1 cut(s) | 59 |
| BstX2I | RGATCY | 2 cut(s) | 40, 415 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 52 |
| BstYI | RGATCY | 2 cut(s) | 40, 415 |
| BsuI | GTATCC | 1 cut(s) | 151 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| BtsCI | GGATG | 2 cut(s) | 232, 323 |
| Cac8I | GCNNGC | 1 cut(s) | 86 |
| CciI | TCATGA | 1 cut(s) | 469 |
| CfoI | GCGC | 1 cut(s) | 265 |
| Cfr10I | RCCGGY | 1 cut(s) | 84 |
| CseI | GACGC | 3 cut(s) | 100, 188, 527 |
| Csp6I | GTAC | 1 cut(s) | 428 |
| CviAII | CATG | 4 cut(s) | 92, 223, 425, 470 |
| CviJI | RGCY | 4 cut(s) | 88, 180, 492, 582 |
| CviKI_1 | RGCY | 4 cut(s) | 88, 180, 492, 582 |
| CviQI | GTAC | 1 cut(s) | 428 |
| DdeI | CTNAG | 1 cut(s) | 493 |
| DpnI | GATC | 3 cut(s) | 42, 234, 417 |
| DpnII | GATC | 3 cut(s) | 40, 232, 415 |
| Ecl136II | GAGCTC | 1 cut(s) | 492 |
| Eco24I | GRGCYC | 1 cut(s) | 494 |
| Eco47III | AGCGCT | 1 cut(s) | 264 |
| Eco53kI | GAGCTC | 1 cut(s) | 492 |
| Eco57I | CTGAAG | 1 cut(s) | 581 |
| EcoICRI | GAGCTC | 1 cut(s) | 492 |
| EcoT38I | GRGCYC | 1 cut(s) | 494 |
| FaeI | CATG | 4 cut(s) | 95, 226, 428, 473 |
| FaiI | YATR | 6 cut(s) | 23, 93, 224, 254, 426, 471 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 507, 539 |
| FatI | CATG | 4 cut(s) | 91, 222, 424, 469 |
| Fnu4HI | GCNGC | 1 cut(s) | 534 |
| FokI | GGATG | 2 cut(s) | 239, 310 |
| FriOI | GRGCYC | 1 cut(s) | 494 |
| Fsp4HI | GCNGC | 1 cut(s) | 534 |
| FspBI | CTAG | 2 cut(s) | 341, 579 |
| GlaI | GCGC | 1 cut(s) | 264 |
| GluI | GCNGC | 1 cut(s) | 534 |
| HaeII | RGCGCY | 1 cut(s) | 266 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| HapII | CCGG | 1 cut(s) | 85 |
| HgaI | GACGC | 3 cut(s) | 100, 188, 527 |
| HhaI | GCGC | 1 cut(s) | 265 |
| Hin1II | CATG | 4 cut(s) | 95, 226, 428, 473 |
| Hin6I | GCGC | 1 cut(s) | 263 |
| HinP1I | GCGC | 1 cut(s) | 263 |
| HincII | GTYRAC | 1 cut(s) | 74 |
| HindII | GTYRAC | 1 cut(s) | 74 |
| HinfI | GANTC | 4 cut(s) | 210, 358, 374, 553 |
| HpaII | CCGG | 1 cut(s) | 85 |
| HphI | GGTGA | 1 cut(s) | 464 |
| Hpy166II | GTNNAC | 2 cut(s) | 74, 552 |
| Hpy188I | TCNGA | 3 cut(s) | 204, 313, 496 |
| Hpy188III | TCNNGA | 6 cut(s) | 258, 341, 355, 362, 470, 559 |
| Hpy8I | GTNNAC | 2 cut(s) | 74, 552 |
| HpyAV | CCTTC | 3 cut(s) | 199, 229, 434 |
| HpyCH4III | ACNGT | 1 cut(s) | 59 |
| HpyCH4V | TGCA | 3 cut(s) | 63, 189, 323 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 186 |
| HpyF3I | CTNAG | 1 cut(s) | 493 |
| Hsp92II | CATG | 4 cut(s) | 95, 226, 428, 473 |
| HspAI | GCGC | 1 cut(s) | 263 |
| KroI | GCCGGC | 1 cut(s) | 84 |
| KroNI | GCCGGC | 1 cut(s) | 86 |
| Kzo9I | GATC | 3 cut(s) | 40, 232, 415 |
| LmnI | GCTCC | 1 cut(s) | 93 |
| LpnPI | CCDG | 6 cut(s) | 98, 162, 374, 411, 531, 572 |
| Lsp1109I | GCAGC | 1 cut(s) | 545 |
| LweI | GCATC | 1 cut(s) | 332 |
| MaeI | CTAG | 2 cut(s) | 341, 579 |
| MalI | GATC | 3 cut(s) | 42, 234, 417 |
| MboI | GATC | 3 cut(s) | 40, 232, 415 |
| MboII | GAAGA | 3 cut(s) | 59, 260, 574 |
| MfeI | CAATTG | 1 cut(s) | 276 |
| MflI | RGATCY | 2 cut(s) | 40, 415 |
| MhlI | GDGCHC | 1 cut(s) | 494 |
| MluCI | AATT | 6 cut(s) | 102, 169, 276, 291, 478, 538 |
| MluI | ACGCGT | 1 cut(s) | 109 |
| MlyI | GAGTC | 1 cut(s) | 547 |
| MnlI | CCTC | 6 cut(s) | 143, 148, 236, 337, 430, 448 |
| MroNI | GCCGGC | 1 cut(s) | 84 |
| MseI | TTAA | 4 cut(s) | 11, 105, 123, 146 |
| MslI | CAYNNNNRTG | 2 cut(s) | 96, 221 |
| MspI | CCGG | 1 cut(s) | 85 |
| MunI | CAATTG | 1 cut(s) | 276 |
| MvnI | CGCG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 186 |
| NaeI | GCCGGC | 1 cut(s) | 86 |
| NdeII | GATC | 3 cut(s) | 40, 232, 415 |
| NgoMIV | GCCGGC | 1 cut(s) | 84 |
| NlaIII | CATG | 4 cut(s) | 95, 226, 428, 473 |
| NlaIV | GGNNCC | 3 cut(s) | 42, 89, 417 |
| NspI | RCATGY | 1 cut(s) | 428 |
| PagI | TCATGA | 1 cut(s) | 469 |
| PdiI | GCCGGC | 1 cut(s) | 86 |
| PfeI | GAWTC | 3 cut(s) | 210, 358, 374 |
| PkrI | GCNGC | 1 cut(s) | 535 |
| PleI | GAGTC | 1 cut(s) | 547 |
| PpsI | GAGTC | 1 cut(s) | 547 |
| Psp124BI | GAGCTC | 1 cut(s) | 494 |
| PspN4I | GGNNCC | 3 cut(s) | 42, 89, 417 |
| PsuI | RGATCY | 2 cut(s) | 40, 415 |
| RsaI | GTAC | 1 cut(s) | 429 |
| RsaNI | GTAC | 1 cut(s) | 428 |
| RseI | CAYNNNNRTG | 2 cut(s) | 96, 221 |
| SacI | GAGCTC | 1 cut(s) | 494 |
| SaqAI | TTAA | 4 cut(s) | 11, 105, 123, 146 |
| SatI | GCNGC | 1 cut(s) | 534 |
| Sau3AI | GATC | 3 cut(s) | 40, 232, 415 |
| SchI | GAGTC | 1 cut(s) | 547 |
| SduI | GDGCHC | 1 cut(s) | 494 |
| SetI | ASST | 3 cut(s) | 221, 320, 494 |
| SfaNI | GCATC | 1 cut(s) | 332 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 96, 221 |
| SmlI | CTYRAG | 1 cut(s) | 362 |
| SmoI | CTYRAG | 1 cut(s) | 362 |
| Sse9I | AATT | 6 cut(s) | 102, 169, 276, 291, 478, 538 |
| SspMI | CTAG | 2 cut(s) | 341, 579 |
| SstI | GAGCTC | 1 cut(s) | 494 |
| TaaI | ACNGT | 1 cut(s) | 59 |
| TaqI | TCGA | 3 cut(s) | 287, 394, 462 |
| TasI | AATT | 6 cut(s) | 102, 169, 276, 291, 478, 538 |
| TfiI | GAWTC | 3 cut(s) | 210, 358, 374 |
| Tru1I | TTAA | 4 cut(s) | 11, 105, 123, 146 |
| Tru9I | TTAA | 4 cut(s) | 11, 105, 123, 146 |
| TseI | GCWGC | 1 cut(s) | 533 |
| TspDTI | ATGAA | 3 cut(s) | 211, 360, 486 |
| XapI | RAATTY | 2 cut(s) | 291, 538 |
| XbaI | TCTAGA | 1 cut(s) | 340 |
| XceI | RCATGY | 1 cut(s) | 428 |
| XspI | CTAG | 2 cut(s) | 341, 579 |