TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2737 |
| Acc16I | TGCGCA | 2 cut(s) | 4259, 4281 |
| AccB1I | GGYRCC | 3 cut(s) | 53, 776, 1147 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4103 |
| AccI | GTMKAC | 1 cut(s) | 2970 |
| AccII | CGCG | 2 cut(s) | 1327, 3801 |
| AccIII | TCCGGA | 1 cut(s) | 4765 |
| AclI | AACGTT | 3 cut(s) | 2938, 4649, 4782 |
| AclWI | GGATC | 9 cut(s) | 1162, 1293, 1751, 1764, 3182, 3933, 4143, 4425, 4491 |
| AcoI | YGGCCR | 3 cut(s) | 429, 1191, 1356 |
| AcsI | RAATTY | 9 cut(s) | 2252, 2453, 2913, 3832, 3954, 4091, 4314, 4709, 4761 |
| AcuI | CTGAAG | 3 cut(s) | 2083, 3699, 3880 |
| AcyI | GRCGYC | 3 cut(s) | 777, 1148, 4865 |
| AdeI | CACNNNGTG | 1 cut(s) | 3074 |
| AfaI | GTAC | 5 cut(s) | 121, 213, 2307, 3940, 4658 |
| AflIII | ACRYGT | 2 cut(s) | 2646, 3848 |
| AjiI | CACGTC | 2 cut(s) | 2647, 2848 |
| AjnI | CCWGG | 5 cut(s) | 669, 867, 2611, 3481, 3567 |
| AleI | CACNNNNGTG | 1 cut(s) | 4938 |
| Alw21I | GWGCWC | 4 cut(s) | 765, 1578, 2145, 2775 |
| Alw26I | GTCTC | 8 cut(s) | 455, 898, 1302, 1550, 2441, 2723, 4718, 4744 |
| Alw44I | GTGCAC | 1 cut(s) | 2771 |
| AlwI | GGATC | 9 cut(s) | 1162, 1293, 1751, 1764, 3182, 3933, 4143, 4425, 4491 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 314, 427, 3347 |
| Ama87I | CYCGRG | 2 cut(s) | 1129, 1950 |
| Aor13HI | TCCGGA | 1 cut(s) | 4765 |
| ApaLI | GTGCAC | 1 cut(s) | 2771 |
| ApoI | RAATTY | 9 cut(s) | 2252, 2453, 2913, 3832, 3954, 4091, 4314, 4709, 4761 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 798, 830 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 417 |
| AspLEI | GCGC | 4 cut(s) | 779, 1150, 4260, 4282 |
| AspS9I | GGNCC | 7 cut(s) | 155, 741, 956, 1330, 2609, 2900, 3571 |
| AsuC2I | CCSGG | 5 cut(s) | 975, 1130, 1131, 2904, 3890 |
| AvaI | CYCGRG | 2 cut(s) | 1129, 1950 |
| AvaII | GGWCC | 3 cut(s) | 155, 1330, 3571 |
| BaeGI | GKGCMC | 2 cut(s) | 56, 2775 |
| BalI | TGGCCA | 1 cut(s) | 431 |
| BamHI | GGATCC | 1 cut(s) | 1756 |
| BanI | GGYRCC | 3 cut(s) | 53, 776, 1147 |
| BanII | GRGCYC | 5 cut(s) | 765, 1271, 1319, 1578, 2145 |
| BbsI | GAAGAC | 8 cut(s) | 1206, 1468, 1639, 2005, 2133, 3687, 4682, 4905 |
| Bbv12I | GWGCWC | 4 cut(s) | 765, 1578, 2145, 2775 |
| BceAI | ACGGC | 2 cut(s) | 385, 4222 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3281, 3315 |
| BciT130I | CCWGG | 5 cut(s) | 671, 869, 2613, 3483, 3569 |
| BciVI | GTATCC | 1 cut(s) | 2029 |
| BclI | TGATCA | 5 cut(s) | 178, 1395, 1447, 1813, 2350 |
| BcnI | CCSGG | 5 cut(s) | 975, 1130, 1131, 2904, 3890 |
| BcoDI | GTCTC | 8 cut(s) | 455, 898, 1302, 1550, 2441, 2723, 4718, 4744 |
| BfaI | CTAG | 6 cut(s) | 386, 479, 660, 2714, 2859, 3317 |
| BfmI | CTRYAG | 6 cut(s) | 300, 3588, 4053, 4478, 4577, 4936 |
| BfoI | RGCGCY | 2 cut(s) | 780, 1151 |
| BfuI | GTATCC | 1 cut(s) | 2029 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 338, 954 |
| BlpI | GCTNAGC | 2 cut(s) | 1370, 2114 |
| Bme18I | GGWCC | 3 cut(s) | 155, 1330, 3571 |
| BmeT110I | CYCGRG | 2 cut(s) | 1129, 1950 |
| BmgBI | CACGTC | 2 cut(s) | 2647, 2848 |
| BmgT120I | GGNCC | 7 cut(s) | 155, 741, 956, 1330, 2609, 2900, 3571 |
| BmrI | ACTGGG | 2 cut(s) | 1291, 4410 |
| BmuI | ACTGGG | 2 cut(s) | 1291, 4410 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2850 |
| BpiI | GAAGAC | 8 cut(s) | 1206, 1468, 1639, 2005, 2133, 3687, 4682, 4905 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 79, 111 |
| BpmI | CTGGAG | 1 cut(s) | 255 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1370, 2114 |
| BpuEI | CTTGAG | 4 cut(s) | 527, 1654, 2191, 4144 |
| BpuMI | CCSGG | 5 cut(s) | 975, 1130, 1131, 2904, 3890 |
| Bsa29I | ATCGAT | 1 cut(s) | 564 |
| BsaHI | GRCGYC | 3 cut(s) | 777, 1148, 4865 |
| BsaI | GGTCTC | 1 cut(s) | 1550 |
| BsaWI | WCCGGW | 2 cut(s) | 84, 4765 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2127, 2157 |
| Bse118I | RCCGGY | 4 cut(s) | 874, 953, 1144, 1150 |
| Bse1I | ACTGG | 8 cut(s) | 1223, 1286, 1695, 2232, 2531, 3942, 4405, 4818 |
| Bse3DI | GCAATG | 1 cut(s) | 2517 |
| BseAI | TCCGGA | 1 cut(s) | 4765 |
| BseBI | CCWGG | 5 cut(s) | 671, 869, 2613, 3483, 3569 |
| BseCI | ATCGAT | 1 cut(s) | 564 |
| BseMI | GCAATG | 1 cut(s) | 2517 |
| BseMII | CTCAG | 5 cut(s) | 1361, 1472, 1776, 2009, 2313 |
| BseNI | ACTGG | 8 cut(s) | 1223, 1286, 1695, 2232, 2531, 3942, 4405, 4818 |
| BseRI | GAGGAG | 7 cut(s) | 694, 955, 1290, 1599, 1637, 2136, 2597 |
| BseSI | GKGCMC | 2 cut(s) | 56, 2775 |
| BseX3I | CGGCCG | 2 cut(s) | 1191, 1356 |
| BseYI | CCCAGC | 2 cut(s) | 188, 4641 |
| BsgI | GTGCAG | 5 cut(s) | 634, 1511, 1968, 3096, 4474 |
| Bsh1236I | CGCG | 2 cut(s) | 1327, 3801 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1194, 1359 |
| BshNI | GGYRCC | 3 cut(s) | 53, 776, 1147 |
| BshVI | ATCGAT | 1 cut(s) | 564 |
| BsiEI | CGRYCG | 2 cut(s) | 1194, 1359 |
| BsiHKAI | GWGCWC | 4 cut(s) | 765, 1578, 2145, 2775 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1129, 1950 |
| BslFI | GGGAC | 5 cut(s) | 919, 1343, 2768, 3837, 4226 |
| BsmAI | GTCTC | 8 cut(s) | 455, 898, 1302, 1550, 2441, 2723, 4718, 4744 |
| BsmBI | CGTCTC | 3 cut(s) | 898, 1302, 4718 |
| BsmFI | GGGAC | 5 cut(s) | 919, 1343, 2768, 3837, 4226 |
| BsmI | GAATGC | 4 cut(s) | 1712, 2249, 3026, 3607 |
| Bso31I | GGTCTC | 1 cut(s) | 1550 |
| BsoBI | CYCGRG | 2 cut(s) | 1129, 1950 |
| Bsp1286I | GDGCHC | 7 cut(s) | 56, 765, 1271, 1319, 1578, 2145, 2775 |
| Bsp13I | TCCGGA | 1 cut(s) | 4765 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1370, 2114 |
| BspCNI | CTCAG | 5 cut(s) | 1362, 1473, 1775, 2010, 2312 |
| BspDI | ATCGAT | 1 cut(s) | 564 |
| BspEI | TCCGGA | 1 cut(s) | 4765 |
| BspFNI | CGCG | 2 cut(s) | 1327, 3801 |
| BspHI | TCATGA | 2 cut(s) | 4626, 4952 |
| BspMAI | CTGCAG | 2 cut(s) | 4482, 4940 |
| BspPI | GGATC | 9 cut(s) | 1162, 1293, 1751, 1764, 3182, 3933, 4143, 4425, 4491 |
| BspQI | GCTCTTC | 1 cut(s) | 4875 |
| BspT107I | GGYRCC | 3 cut(s) | 53, 776, 1147 |
| BspTNI | GGTCTC | 1 cut(s) | 1550 |
| BsrDI | GCAATG | 1 cut(s) | 2517 |
| BsrFI | RCCGGY | 4 cut(s) | 874, 953, 1144, 1150 |
| BsrI | ACTGG | 8 cut(s) | 1223, 1286, 1695, 2232, 2531, 3942, 4405, 4818 |
| BssAI | RCCGGY | 4 cut(s) | 874, 953, 1144, 1150 |
| BssNAI | GTATAC | 1 cut(s) | 2971 |
| BssNI | GRCGYC | 3 cut(s) | 777, 1148, 4865 |
| BssT1I | CCWWGG | 5 cut(s) | 136, 772, 2640, 3091, 4660 |
| Bst1107I | GTATAC | 1 cut(s) | 2971 |
| Bst2UI | CCWGG | 5 cut(s) | 671, 869, 2613, 3483, 3569 |
| Bst4CI | ACNGT | 7 cut(s) | 892, 2442, 2777, 3592, 4217, 4413, 4872 |
| Bst6I | CTCTTC | 5 cut(s) | 1033, 1340, 4104, 4191, 4875 |
| BstACI | GRCGYC | 3 cut(s) | 777, 1148, 4865 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 3074, 3086, 4477 |
| BstDSI | CCRYGG | 1 cut(s) | 3799 |
| BstEII | GGTNACC | 1 cut(s) | 880 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3379 |
| BstFNI | CGCG | 2 cut(s) | 1327, 3801 |
| BstH2I | RGCGCY | 2 cut(s) | 780, 1151 |
| BstHHI | GCGC | 4 cut(s) | 779, 1150, 4260, 4282 |
| BstMAI | GTCTC | 8 cut(s) | 455, 898, 1302, 1550, 2441, 2723, 4718, 4744 |
| BstMCI | CGRYCG | 2 cut(s) | 1194, 1359 |
| BstNI | CCWGG | 5 cut(s) | 671, 869, 2613, 3483, 3569 |
| BstNSI | RCATGY | 3 cut(s) | 618, 3026, 3296 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2850 |
| BstPI | GGTNACC | 1 cut(s) | 880 |
| BstSFI | CTRYAG | 6 cut(s) | 300, 3588, 4053, 4478, 4577, 4936 |
| BstSLI | GKGCMC | 2 cut(s) | 56, 2775 |
| BstUI | CGCG | 2 cut(s) | 1327, 3801 |
| BstV2I | GAAGAC | 8 cut(s) | 1206, 1468, 1639, 2005, 2133, 3687, 4682, 4905 |
| BstX2I | RGATCY | 7 cut(s) | 1285, 1756, 3187, 3925, 4135, 4417, 4483 |
| BstYI | RGATCY | 7 cut(s) | 1285, 1756, 3187, 3925, 4135, 4417, 4483 |
| BstZ17I | GTATAC | 1 cut(s) | 2971 |
| BstZI | CGGCCG | 2 cut(s) | 1191, 1356 |
| Bsu15I | ATCGAT | 1 cut(s) | 564 |
| BsuI | GTATCC | 1 cut(s) | 2029 |
| BsuTUI | ATCGAT | 1 cut(s) | 564 |
| BtgI | CCRYGG | 1 cut(s) | 3799 |
| BtgZI | GCGATG | 1 cut(s) | 387 |
| BtrI | CACGTC | 2 cut(s) | 2647, 2848 |
| BtsI | GCAGTG | 4 cut(s) | 384, 4366, 4933, 4945 |
| BtsIMutI | CAGTG | 9 cut(s) | 384, 467, 2782, 3348, 3904, 4366, 4398, 4933, 4945 |
| CaiI | CAGNNNCTG | 3 cut(s) | 314, 427, 3347 |
| CciI | TCATGA | 2 cut(s) | 4626, 4952 |
| CfoI | GCGC | 4 cut(s) | 779, 1150, 4260, 4282 |
| Cfr10I | RCCGGY | 4 cut(s) | 874, 953, 1144, 1150 |
| Cfr13I | GGNCC | 7 cut(s) | 155, 741, 956, 1330, 2609, 2900, 3571 |
| Cfr42I | CCGCGG | 1 cut(s) | 3802 |
| Cfr9I | CCCGGG | 1 cut(s) | 1129 |
| ClaI | ATCGAT | 1 cut(s) | 564 |
| CseI | GACGC | 4 cut(s) | 1805, 2066, 4735, 4854 |
| Csp6I | GTAC | 5 cut(s) | 120, 212, 2306, 3939, 4657 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 340, 375, 3692, 3727 |
| CviQI | GTAC | 5 cut(s) | 120, 212, 2306, 3939, 4657 |
| DinI | GGCGCC | 2 cut(s) | 778, 1149 |
| DraI | TTTAAA | 3 cut(s) | 3249, 3283, 3915 |
| DraIII | CACNNNGTG | 1 cut(s) | 3074 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2737 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2737 |
| EaeI | YGGCCR | 3 cut(s) | 429, 1191, 1356 |
| EagI | CGGCCG | 2 cut(s) | 1191, 1356 |
| Eam1104I | CTCTTC | 5 cut(s) | 1033, 1340, 4104, 4191, 4875 |
| EarI | CTCTTC | 5 cut(s) | 1033, 1340, 4104, 4191, 4875 |
| EciI | GGCGGA | 3 cut(s) | 697, 1936, 4832 |
| Ecl136II | GAGCTC | 3 cut(s) | 763, 1576, 2143 |
| EclXI | CGGCCG | 2 cut(s) | 1191, 1356 |
| Eco130I | CCWWGG | 5 cut(s) | 136, 772, 2640, 3091, 4660 |
| Eco147I | AGGCCT | 3 cut(s) | 2712, 3096, 3374 |
| Eco24I | GRGCYC | 5 cut(s) | 765, 1271, 1319, 1578, 2145 |
| Eco31I | GGTCTC | 1 cut(s) | 1550 |
| Eco32I | GATATC | 3 cut(s) | 699, 3268, 4591 |
| Eco47I | GGWCC | 3 cut(s) | 155, 1330, 3571 |
| Eco52I | CGGCCG | 2 cut(s) | 1191, 1356 |
| Eco53kI | GAGCTC | 3 cut(s) | 763, 1576, 2143 |
| Eco57I | CTGAAG | 3 cut(s) | 2083, 3699, 3880 |
| Eco88I | CYCGRG | 2 cut(s) | 1129, 1950 |
| Eco91I | GGTNACC | 1 cut(s) | 880 |
| EcoICRI | GAGCTC | 3 cut(s) | 763, 1576, 2143 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3379 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1330, 2609, 3571 |
| EcoO65I | GGTNACC | 1 cut(s) | 880 |
| EcoRI | GAATTC | 1 cut(s) | 2913 |
| EcoRII | CCWGG | 5 cut(s) | 669, 867, 2611, 3481, 3567 |
| EcoRV | GATATC | 3 cut(s) | 699, 3268, 4591 |
| EcoT14I | CCWWGG | 5 cut(s) | 136, 772, 2640, 3091, 4660 |
| EcoT22I | ATGCAT | 4 cut(s) | 616, 2338, 3028, 3426 |
| EcoT38I | GRGCYC | 5 cut(s) | 765, 1271, 1319, 1578, 2145 |
| EgeI | GGCGCC | 2 cut(s) | 778, 1149 |
| EheI | GGCGCC | 2 cut(s) | 778, 1149 |
| ErhI | CCWWGG | 5 cut(s) | 136, 772, 2640, 3091, 4660 |
| Esp3I | CGTCTC | 3 cut(s) | 898, 1302, 4718 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1771, 1803, 2718, 2750 |
| FaqI | GGGAC | 5 cut(s) | 919, 1343, 2768, 3837, 4226 |
| FauI | CCCGC | 9 cut(s) | 735, 788, 793, 997, 1004, 1056, 1212, 1320, 4731 |
| FauNDI | CATATG | 1 cut(s) | 493 |
| FbaI | TGATCA | 5 cut(s) | 178, 1395, 1447, 1813, 2350 |
| FblI | GTMKAC | 1 cut(s) | 2970 |
| FriOI | GRGCYC | 5 cut(s) | 765, 1271, 1319, 1578, 2145 |
| FspAI | RTGCGCAY | 1 cut(s) | 4281 |
| FspBI | CTAG | 6 cut(s) | 386, 479, 660, 2714, 2859, 3317 |
| FspI | TGCGCA | 2 cut(s) | 4259, 4281 |
| GlaI | GCGC | 4 cut(s) | 778, 1149, 4259, 4281 |
| GsaI | CCCAGC | 2 cut(s) | 192, 4645 |
| GsuI | CTGGAG | 1 cut(s) | 255 |
| HaeII | RGCGCY | 2 cut(s) | 780, 1151 |
| HgaI | GACGC | 4 cut(s) | 1805, 2066, 4735, 4854 |
| HhaI | GCGC | 4 cut(s) | 779, 1150, 4260, 4282 |
| Hin1I | GRCGYC | 3 cut(s) | 777, 1148, 4865 |
| Hin6I | GCGC | 4 cut(s) | 777, 1148, 4258, 4280 |
| HinP1I | GCGC | 4 cut(s) | 777, 1148, 4258, 4280 |
| HincII | GTYRAC | 4 cut(s) | 82, 2962, 4717, 4786 |
| HindII | GTYRAC | 4 cut(s) | 82, 2962, 4717, 4786 |
| HindIII | AAGCTT | 5 cut(s) | 2111, 3321, 3983, 4082, 4295 |
| HpaI | GTTAAC | 1 cut(s) | 82 |
| Hpy99I | CGWCG | 2 cut(s) | 1082, 1367 |
| HpyCH4III | ACNGT | 7 cut(s) | 892, 2442, 2777, 3592, 4217, 4413, 4872 |
| Hsp92I | GRCGYC | 3 cut(s) | 777, 1148, 4865 |
| HspAI | GCGC | 4 cut(s) | 777, 1148, 4258, 4280 |
| KasI | GGCGCC | 2 cut(s) | 776, 1147 |
| Kpn2I | TCCGGA | 1 cut(s) | 4765 |
| KroI | GCCGGC | 2 cut(s) | 1144, 1150 |
| KroNI | GCCGGC | 2 cut(s) | 1146, 1152 |
| Ksp22I | TGATCA | 5 cut(s) | 178, 1395, 1447, 1813, 2350 |
| KspAI | GTTAAC | 1 cut(s) | 82 |
| KspI | CCGCGG | 1 cut(s) | 3802 |
| LguI | GCTCTTC | 1 cut(s) | 4875 |
| MaeI | CTAG | 6 cut(s) | 386, 479, 660, 2714, 2859, 3317 |
| MfeI | CAATTG | 5 cut(s) | 1617, 2634, 3704, 4386, 4875 |
| MflI | RGATCY | 7 cut(s) | 1285, 1756, 3187, 3925, 4135, 4417, 4483 |
| MhlI | GDGCHC | 7 cut(s) | 56, 765, 1271, 1319, 1578, 2145, 2775 |
| MlsI | TGGCCA | 1 cut(s) | 431 |
| MluNI | TGGCCA | 1 cut(s) | 431 |
| Mly113I | GGCGCC | 2 cut(s) | 777, 1148 |
| MmeI | TCCRAC | 9 cut(s) | 298, 619, 790, 967, 1795, 3388, 3949, 4395, 4547 |
| Mox20I | TGGCCA | 1 cut(s) | 431 |
| Mph1103I | ATGCAT | 4 cut(s) | 616, 2338, 3028, 3426 |
| MreI | CGCCGGCG | 1 cut(s) | 1144 |
| MroI | TCCGGA | 1 cut(s) | 4765 |
| MroNI | GCCGGC | 2 cut(s) | 1144, 1150 |
| MroXI | GAANNNNTTC | 1 cut(s) | 417 |
| MscI | TGGCCA | 1 cut(s) | 431 |
| MslI | CAYNNNNRTG | 2 cut(s) | 3814, 4938 |
| Msp20I | TGGCCA | 1 cut(s) | 431 |
| MspA1I | CMGCKG | 3 cut(s) | 739, 1245, 3801 |
| MunI | CAATTG | 5 cut(s) | 1617, 2634, 3704, 4386, 4875 |
| Mva1269I | GAATGC | 4 cut(s) | 1712, 2249, 3026, 3607 |
| MvaI | CCWGG | 5 cut(s) | 671, 869, 2613, 3483, 3569 |
| MvnI | CGCG | 2 cut(s) | 1327, 3801 |
| NaeI | GCCGGC | 2 cut(s) | 1146, 1152 |
| NarI | GGCGCC | 2 cut(s) | 777, 1148 |
| NciI | CCSGG | 5 cut(s) | 975, 1130, 1131, 2904, 3890 |
| NdeI | CATATG | 1 cut(s) | 493 |
| NgoMIV | GCCGGC | 2 cut(s) | 1144, 1150 |
| NmeAIII | GCCGAG | 2 cut(s) | 1290, 2605 |
| NsbI | TGCGCA | 2 cut(s) | 4259, 4281 |
| NsiI | ATGCAT | 4 cut(s) | 616, 2338, 3028, 3426 |
| NspI | RCATGY | 3 cut(s) | 618, 3026, 3296 |
| OliI | CACNNNNGTG | 1 cut(s) | 4938 |
| PaeI | GCATGC | 2 cut(s) | 618, 3026 |
| PagI | TCATGA | 2 cut(s) | 4626, 4952 |
| PceI | AGGCCT | 3 cut(s) | 2712, 3096, 3374 |
| PciSI | GCTCTTC | 1 cut(s) | 4875 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1008, 2970 |
| PctI | GAATGC | 4 cut(s) | 1712, 2249, 3026, 3607 |
| PdiI | GCCGGC | 2 cut(s) | 1146, 1152 |
| PdmI | GAANNNNTTC | 1 cut(s) | 417 |
| PflFI | GACNNNGTC | 1 cut(s) | 812 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4103 |
| PfoI | TCCNGGA | 1 cut(s) | 3888 |
| PluTI | GGCGCC | 2 cut(s) | 780, 1151 |
| PpuMI | RGGWCCY | 2 cut(s) | 1330, 3571 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2850 |
| Psp124BI | GAGCTC | 3 cut(s) | 765, 1578, 2145 |
| Psp1406I | AACGTT | 3 cut(s) | 2938, 4649, 4782 |
| Psp5II | RGGWCCY | 2 cut(s) | 1330, 3571 |
| Psp6I | CCWGG | 5 cut(s) | 669, 867, 2611, 3481, 3567 |
| PspEI | GGTNACC | 1 cut(s) | 880 |
| PspFI | CCCAGC | 2 cut(s) | 188, 4641 |
| PspGI | CCWGG | 5 cut(s) | 669, 867, 2611, 3481, 3567 |
| PspPI | GGNCC | 7 cut(s) | 155, 741, 956, 1330, 2609, 2900, 3571 |
| PspPPI | RGGWCCY | 2 cut(s) | 1330, 3571 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4335, 4367 |
| PstI | CTGCAG | 2 cut(s) | 4482, 4940 |
| PstNI | CAGNNNCTG | 3 cut(s) | 314, 427, 3347 |
| PsuI | RGATCY | 7 cut(s) | 1285, 1756, 3187, 3925, 4135, 4417, 4483 |
| PsyI | GACNNNGTC | 1 cut(s) | 812 |
| RsaI | GTAC | 5 cut(s) | 121, 213, 2307, 3940, 4658 |
| RsaNI | GTAC | 5 cut(s) | 120, 212, 2306, 3939, 4657 |
| RseI | CAYNNNNRTG | 2 cut(s) | 3814, 4938 |
| SacI | GAGCTC | 3 cut(s) | 765, 1578, 2145 |
| SacII | CCGCGG | 1 cut(s) | 3802 |
| SapI | GCTCTTC | 1 cut(s) | 4875 |
| Sau96I | GGNCC | 7 cut(s) | 155, 741, 956, 1330, 2609, 2900, 3571 |
| SduI | GDGCHC | 7 cut(s) | 56, 765, 1271, 1319, 1578, 2145, 2775 |
| SfcI | CTRYAG | 6 cut(s) | 300, 3588, 4053, 4478, 4577, 4936 |
| SfoI | GGCGCC | 2 cut(s) | 778, 1149 |
| Sfr303I | CCGCGG | 1 cut(s) | 3802 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1144 |
| SgrBI | CCGCGG | 1 cut(s) | 3802 |
| SinI | GGWCC | 3 cut(s) | 155, 1330, 3571 |
| SmaI | CCCGGG | 1 cut(s) | 1131 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 3814, 4938 |
| SmlI | CTYRAG | 4 cut(s) | 506, 1669, 2206, 4123 |
| SmoI | CTYRAG | 4 cut(s) | 506, 1669, 2206, 4123 |
| SphI | GCATGC | 2 cut(s) | 618, 3026 |
| SseBI | AGGCCT | 3 cut(s) | 2712, 3096, 3374 |
| SspDI | GGCGCC | 2 cut(s) | 776, 1147 |
| SspI | AATATT | 1 cut(s) | 4246 |
| SspMI | CTAG | 6 cut(s) | 386, 479, 660, 2714, 2859, 3317 |
| SstI | GAGCTC | 3 cut(s) | 765, 1578, 2145 |
| StuI | AGGCCT | 3 cut(s) | 2712, 3096, 3374 |
| StyI | CCWWGG | 5 cut(s) | 136, 772, 2640, 3091, 4660 |
| TaaI | ACNGT | 7 cut(s) | 892, 2442, 2777, 3592, 4217, 4413, 4872 |
| TaqI | TCGA | 7 cut(s) | 564, 1011, 1115, 1277, 1489, 4548, 4829 |
| TatI | WGTACW | 1 cut(s) | 211 |
| TscAI | CASTG | 9 cut(s) | 384, 474, 2782, 3348, 3904, 4366, 4405, 4940, 4945 |
| TspGWI | ACGGA | 7 cut(s) | 802, 839, 907, 2414, 3723, 3955, 4440 |
| TspMI | CCCGGG | 1 cut(s) | 1129 |
| TspRI | CASTG | 9 cut(s) | 384, 474, 2782, 3348, 3904, 4366, 4405, 4940, 4945 |
| Tth111I | GACNNNGTC | 1 cut(s) | 812 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4103 |
| VneI | GTGCAC | 1 cut(s) | 2771 |
| VpaK11BI | GGWCC | 3 cut(s) | 155, 1330, 3571 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3379 |
| XapI | RAATTY | 9 cut(s) | 2252, 2453, 2913, 3832, 3954, 4091, 4314, 4709, 4761 |
| XbaI | TCTAGA | 1 cut(s) | 385 |
| XceI | RCATGY | 3 cut(s) | 618, 3026, 3296 |
| XmaI | CCCGGG | 1 cut(s) | 1129 |
| XmiI | GTMKAC | 1 cut(s) | 2970 |
| XmnI | GAANNNNTTC | 1 cut(s) | 417 |
| XspI | CTAG | 6 cut(s) | 386, 479, 660, 2714, 2859, 3317 |
| Zsp2I | ATGCAT | 4 cut(s) | 616, 2338, 3028, 3426 |