TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 15 - 100 | 5.6e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 609 |
| AccB1I | GGYRCC | 1 cut(s) | 91 |
| AccI | GTMKAC | 1 cut(s) | 156 |
| AccII | CGCG | 2 cut(s) | 38, 77 |
| AciI | CCGC | 2 cut(s) | 229, 487 |
| AcsI | RAATTY | 6 cut(s) | 201, 264, 352, 437, 524, 547 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 87, 88 |
| AgsI | TTSAA | 3 cut(s) | 524, 536, 553 |
| AhlI | ACTAGT | 1 cut(s) | 611 |
| AluBI | AGCT | 1 cut(s) | 211 |
| AluI | AGCT | 1 cut(s) | 211 |
| Alw26I | GTCTC | 1 cut(s) | 334 |
| ApeKI | GCWGC | 1 cut(s) | 183 |
| ApoI | RAATTY | 6 cut(s) | 201, 264, 352, 437, 524, 547 |
| AspLEI | GCGC | 2 cut(s) | 50, 119 |
| AspS9I | GGNCC | 1 cut(s) | 622 |
| AsuII | TTCGAA | 1 cut(s) | 269 |
| AvaII | GGWCC | 1 cut(s) | 622 |
| BaeGI | GKGCMC | 1 cut(s) | 94 |
| BanI | GGYRCC | 1 cut(s) | 91 |
| BbvI | GCAGC | 1 cut(s) | 170 |
| BccI | CCATC | 1 cut(s) | 358 |
| BclI | TGATCA | 1 cut(s) | 592 |
| BcoDI | GTCTC | 1 cut(s) | 334 |
| BcuI | ACTAGT | 1 cut(s) | 611 |
| BfaI | CTAG | 1 cut(s) | 612 |
| BfoI | RGCGCY | 1 cut(s) | 120 |
| BfuAI | ACCTGC | 1 cut(s) | 609 |
| BisI | GCNGC | 2 cut(s) | 184, 229 |
| BlsI | GCNGC | 2 cut(s) | 185, 230 |
| Bme18I | GGWCC | 1 cut(s) | 622 |
| BmgT120I | GGNCC | 1 cut(s) | 622 |
| BmiI | GGNNCC | 4 cut(s) | 6, 93, 474, 485 |
| BmsI | GCATC | 3 cut(s) | 35, 150, 520 |
| BpmI | CTGGAG | 2 cut(s) | 208, 358 |
| Bpu14I | TTCGAA | 1 cut(s) | 269 |
| BpuEI | CTTGAG | 1 cut(s) | 181 |
| Bsa29I | ATCGAT | 1 cut(s) | 28 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 331, 361 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 87, 88 |
| Bse1I | ACTGG | 1 cut(s) | 455 |
| BseCI | ATCGAT | 1 cut(s) | 28 |
| BseGI | GGATG | 3 cut(s) | 50, 241, 382 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 87, 88 |
| BseMII | CTCAG | 1 cut(s) | 440 |
| BseNI | ACTGG | 1 cut(s) | 455 |
| BseRI | GAGGAG | 1 cut(s) | 329 |
| BseSI | GKGCMC | 1 cut(s) | 94 |
| BseXI | GCAGC | 1 cut(s) | 170 |
| Bsh1236I | CGCG | 2 cut(s) | 38, 77 |
| BshNI | GGYRCC | 1 cut(s) | 91 |
| BshVI | ATCGAT | 1 cut(s) | 28 |
| BsiSI | CCGG | 1 cut(s) | 8 |
| BslFI | GGGAC | 2 cut(s) | 64, 572 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 87, 88 |
| BsmAI | GTCTC | 1 cut(s) | 334 |
| BsmFI | GGGAC | 2 cut(s) | 64, 572 |
| BsmI | GAATGC | 1 cut(s) | 143 |
| Bsp119I | TTCGAA | 1 cut(s) | 269 |
| Bsp1286I | GDGCHC | 1 cut(s) | 94 |
| Bsp143I | GATC | 3 cut(s) | 25, 400, 592 |
| BspACI | CCGC | 2 cut(s) | 229, 487 |
| BspCNI | CTCAG | 1 cut(s) | 439 |
| BspDI | ATCGAT | 1 cut(s) | 28 |
| BspFNI | CGCG | 2 cut(s) | 38, 77 |
| BspLI | GGNNCC | 4 cut(s) | 6, 93, 474, 485 |
| BspMI | ACCTGC | 1 cut(s) | 609 |
| BspT104I | TTCGAA | 1 cut(s) | 269 |
| BspT107I | GGYRCC | 1 cut(s) | 91 |
| BsrI | ACTGG | 1 cut(s) | 455 |
| BssMI | GATC | 3 cut(s) | 25, 400, 592 |
| Bst4CI | ACNGT | 1 cut(s) | 398 |
| Bst6I | CTCTTC | 1 cut(s) | 410 |
| BstBI | TTCGAA | 1 cut(s) | 269 |
| BstDEI | CTNAG | 1 cut(s) | 426 |
| BstF5I | GGATG | 3 cut(s) | 50, 241, 382 |
| BstFNI | CGCG | 2 cut(s) | 38, 77 |
| BstH2I | RGCGCY | 1 cut(s) | 120 |
| BstHHI | GCGC | 2 cut(s) | 50, 119 |
| BstKTI | GATC | 3 cut(s) | 28, 403, 595 |
| BstMAI | GTCTC | 1 cut(s) | 334 |
| BstMBI | GATC | 3 cut(s) | 25, 400, 592 |
| BstSLI | GKGCMC | 1 cut(s) | 94 |
| BstUI | CGCG | 2 cut(s) | 38, 77 |
| BstV1I | GCAGC | 1 cut(s) | 170 |
| Bsu15I | ATCGAT | 1 cut(s) | 28 |
| BsuTUI | ATCGAT | 1 cut(s) | 28 |
| BtsCI | GGATG | 3 cut(s) | 50, 241, 382 |
| BtsIMutI | CAGTG | 1 cut(s) | 403 |
| BveI | ACCTGC | 1 cut(s) | 609 |
| CfoI | GCGC | 2 cut(s) | 50, 119 |
| Cfr13I | GGNCC | 1 cut(s) | 622 |
| ClaI | ATCGAT | 1 cut(s) | 28 |
| CseI | GACGC | 1 cut(s) | 66 |
| CviAII | CATG | 1 cut(s) | 505 |
| CviJI | RGCY | 5 cut(s) | 7, 183, 193, 211, 575 |
| CviKI_1 | RGCY | 5 cut(s) | 7, 183, 193, 211, 575 |
| DdeI | CTNAG | 1 cut(s) | 426 |
| DpnI | GATC | 3 cut(s) | 27, 402, 594 |
| DpnII | GATC | 3 cut(s) | 25, 400, 592 |
| Eam1104I | CTCTTC | 1 cut(s) | 410 |
| EarI | CTCTTC | 1 cut(s) | 410 |
| Eco47I | GGWCC | 1 cut(s) | 622 |
| EcoRI | GAATTC | 1 cut(s) | 437 |
| EcoT22I | ATGCAT | 1 cut(s) | 143 |
| FaeI | CATG | 1 cut(s) | 508 |
| FaiI | YATR | 4 cut(s) | 251, 506, 627, 649 |
| FaqI | GGGAC | 2 cut(s) | 64, 572 |
| FatI | CATG | 1 cut(s) | 504 |
| FbaI | TGATCA | 1 cut(s) | 592 |
| FblI | GTMKAC | 1 cut(s) | 156 |
| Fnu4HI | GCNGC | 2 cut(s) | 184, 229 |
| FokI | GGATG | 3 cut(s) | 57, 248, 389 |
| Fsp4HI | GCNGC | 2 cut(s) | 184, 229 |
| FspBI | CTAG | 1 cut(s) | 612 |
| GlaI | GCGC | 2 cut(s) | 49, 118 |
| GluI | GCNGC | 2 cut(s) | 184, 229 |
| GsuI | CTGGAG | 2 cut(s) | 208, 358 |
| HaeII | RGCGCY | 1 cut(s) | 120 |
| HapII | CCGG | 1 cut(s) | 8 |
| HgaI | GACGC | 1 cut(s) | 66 |
| HhaI | GCGC | 2 cut(s) | 50, 119 |
| Hin1II | CATG | 1 cut(s) | 508 |
| Hin6I | GCGC | 2 cut(s) | 48, 117 |
| HinP1I | GCGC | 2 cut(s) | 48, 117 |
| HincII | GTYRAC | 1 cut(s) | 157 |
| HindII | GTYRAC | 1 cut(s) | 157 |
| HinfI | GANTC | 4 cut(s) | 30, 299, 342, 414 |
| HpaII | CCGG | 1 cut(s) | 8 |
| Hpy166II | GTNNAC | 2 cut(s) | 157, 394 |
| Hpy188I | TCNGA | 3 cut(s) | 136, 363, 436 |
| Hpy188III | TCNNGA | 3 cut(s) | 111, 206, 411 |
| Hpy8I | GTNNAC | 2 cut(s) | 157, 394 |
| HpyCH4III | ACNGT | 1 cut(s) | 398 |
| HpyCH4V | TGCA | 4 cut(s) | 141, 249, 545, 604 |
| HpyF3I | CTNAG | 1 cut(s) | 426 |
| Hsp92II | CATG | 1 cut(s) | 508 |
| HspAI | GCGC | 2 cut(s) | 48, 117 |
| Ksp22I | TGATCA | 1 cut(s) | 592 |
| Kzo9I | GATC | 3 cut(s) | 25, 400, 592 |
| LmnI | GCTCC | 2 cut(s) | 4, 289 |
| LpnPI | CCDG | 8 cut(s) | 21, 108, 172, 219, 322, 468, 552, 614 |
| Lsp1109I | GCAGC | 1 cut(s) | 170 |
| LweI | GCATC | 3 cut(s) | 35, 150, 520 |
| MaeI | CTAG | 1 cut(s) | 612 |
| MalI | GATC | 3 cut(s) | 27, 402, 594 |
| MboI | GATC | 3 cut(s) | 25, 400, 592 |
| MboII | GAAGA | 2 cut(s) | 397, 414 |
| MhlI | GDGCHC | 1 cut(s) | 94 |
| MlyI | GAGTC | 2 cut(s) | 336, 408 |
| MnlI | CCTC | 9 cut(s) | 35, 83, 156, 173, 183, 307, 382, 463, 613 |
| Mph1103I | ATGCAT | 1 cut(s) | 143 |
| MslI | CAYNNNNRTG | 1 cut(s) | 636 |
| MspA1I | CMGCKG | 1 cut(s) | 489 |
| MspI | CCGG | 1 cut(s) | 8 |
| Mva1269I | GAATGC | 1 cut(s) | 143 |
| MvnI | CGCG | 2 cut(s) | 38, 77 |
| NdeII | GATC | 3 cut(s) | 25, 400, 592 |
| NlaIII | CATG | 1 cut(s) | 508 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 93, 474, 485 |
| NsiI | ATGCAT | 1 cut(s) | 143 |
| NspV | TTCGAA | 1 cut(s) | 269 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 275 |
| PctI | GAATGC | 1 cut(s) | 143 |
| PfeI | GAWTC | 2 cut(s) | 30, 299 |
| PflFI | GACNNNGTC | 1 cut(s) | 345 |
| PkrI | GCNGC | 2 cut(s) | 185, 230 |
| PleI | GAGTC | 2 cut(s) | 336, 408 |
| PpsI | GAGTC | 2 cut(s) | 336, 408 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 93, 474, 485 |
| PspPI | GGNCC | 1 cut(s) | 622 |
| PsyI | GACNNNGTC | 1 cut(s) | 345 |
| RseI | CAYNNNNRTG | 1 cut(s) | 636 |
| SalI | GTCGAC | 1 cut(s) | 155 |
| SatI | GCNGC | 2 cut(s) | 184, 229 |
| Sau3AI | GATC | 3 cut(s) | 25, 400, 592 |
| Sau96I | GGNCC | 1 cut(s) | 622 |
| SchI | GAGTC | 2 cut(s) | 336, 408 |
| SduI | GDGCHC | 1 cut(s) | 94 |
| SetI | ASST | 7 cut(s) | 97, 213, 393, 474, 603, 624, 646 |
| SfaNI | GCATC | 3 cut(s) | 35, 150, 520 |
| SfuI | TTCGAA | 1 cut(s) | 269 |
| SinI | GGWCC | 1 cut(s) | 622 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 636 |
| SmlI | CTYRAG | 1 cut(s) | 160 |
| SmoI | CTYRAG | 1 cut(s) | 160 |
| SpeI | ACTAGT | 1 cut(s) | 611 |
| SsiI | CCGC | 2 cut(s) | 229, 487 |
| SspMI | CTAG | 1 cut(s) | 612 |
| TaaI | ACNGT | 1 cut(s) | 398 |
| TaqI | TCGA | 5 cut(s) | 28, 156, 269, 278, 412 |
| TauI | GCSGC | 1 cut(s) | 231 |
| TfiI | GAWTC | 2 cut(s) | 30, 299 |
| TscAI | CASTG | 1 cut(s) | 403 |
| TseI | GCWGC | 1 cut(s) | 183 |
| TspDTI | ATGAA | 2 cut(s) | 335, 493 |
| TspRI | CASTG | 1 cut(s) | 403 |
| Tth111I | GACNNNGTC | 1 cut(s) | 345 |
| VpaK11BI | GGWCC | 1 cut(s) | 622 |
| XapI | RAATTY | 6 cut(s) | 201, 264, 352, 437, 524, 547 |
| XmiI | GTMKAC | 1 cut(s) | 156 |
| XspI | CTAG | 1 cut(s) | 612 |
| Zsp2I | ATGCAT | 1 cut(s) | 143 |