TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 10 - 221 | 4.2e-19 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1333 |
| AccB1I | GGYRCC | 1 cut(s) | 448 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1205 |
| AccBSI | CCGCTC | 1 cut(s) | 546 |
| AccII | CGCG | 1 cut(s) | 395 |
| AciI | CCGC | 5 cut(s) | 365, 393, 395, 546, 977 |
| AclWI | GGATC | 2 cut(s) | 21, 1059 |
| AcsI | RAATTY | 6 cut(s) | 567, 630, 718, 794, 881, 904 |
| AcuI | CTGAAG | 2 cut(s) | 266, 327 |
| AcvI | CACGTG | 1 cut(s) | 461 |
| AfaI | GTAC | 2 cut(s) | 263, 1002 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 295, 296, 444, 445, 1205, 1311 |
| AflIII | ACRYGT | 2 cut(s) | 1003, 1127 |
| AgsI | TTSAA | 8 cut(s) | 176, 184, 357, 593, 881, 893, 910, 1085 |
| AjiI | CACGTC | 1 cut(s) | 604 |
| AjnI | CCWGG | 1 cut(s) | 7 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1003, 1035 |
| AluBI | AGCT | 6 cut(s) | 577, 640, 846, 958, 1176, 1225 |
| AluI | AGCT | 6 cut(s) | 577, 640, 846, 958, 1176, 1225 |
| Alw26I | GTCTC | 2 cut(s) | 700, 1203 |
| AlwI | GGATC | 2 cut(s) | 21, 1059 |
| ApeKI | GCWGC | 6 cut(s) | 222, 267, 522, 549, 958, 1063 |
| ApoI | RAATTY | 6 cut(s) | 567, 630, 718, 794, 881, 904 |
| AseI | ATTAAT | 1 cut(s) | 42 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 312 |
| AspLEI | GCGC | 2 cut(s) | 407, 485 |
| AspS9I | GGNCC | 1 cut(s) | 1183 |
| AsuHPI | GGTGA | 2 cut(s) | 382, 1237 |
| AsuII | TTCGAA | 1 cut(s) | 635 |
| AvaII | GGWCC | 1 cut(s) | 1183 |
| BaeGI | GKGCMC | 1 cut(s) | 451 |
| BanI | GGYRCC | 1 cut(s) | 448 |
| BbrPI | CACGTG | 1 cut(s) | 461 |
| BbvI | GCAGC | 6 cut(s) | 234, 254, 509, 536, 945, 1050 |
| BccI | CCATC | 2 cut(s) | 679, 724 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 541, 575 |
| BciT130I | CCWGG | 1 cut(s) | 9 |
| BclI | TGATCA | 1 cut(s) | 949 |
| BcoDI | GTCTC | 2 cut(s) | 700, 1203 |
| BfmI | CTRYAG | 1 cut(s) | 550 |
| BfoI | RGCGCY | 1 cut(s) | 486 |
| BglII | AGATCT | 1 cut(s) | 211 |
| BisI | GCNGC | 8 cut(s) | 223, 268, 365, 523, 547, 550, 959, 1064 |
| BlsI | GCNGC | 8 cut(s) | 224, 269, 366, 524, 548, 551, 960, 1065 |
| Bme1390I | CCNGG | 1 cut(s) | 9 |
| Bme18I | GGWCC | 1 cut(s) | 1183 |
| BmgBI | CACGTC | 1 cut(s) | 604 |
| BmgT120I | GGNCC | 1 cut(s) | 1183 |
| BmiI | GGNNCC | 4 cut(s) | 363, 450, 831, 1184 |
| BmrFI | CCNGG | 1 cut(s) | 9 |
| BmsI | GCATC | 7 cut(s) | 124, 141, 234, 338, 392, 516, 877 |
| BpmI | CTGGAG | 3 cut(s) | 43, 86, 724 |
| Bpu14I | TTCGAA | 1 cut(s) | 635 |
| BpuEI | CTTGAG | 1 cut(s) | 547 |
| BsaAI | YACGTR | 3 cut(s) | 461, 1004, 1128 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1254 |
| BsaJI | CCNNGG | 1 cut(s) | 393 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 697, 727 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 295, 296, 444, 445, 1205, 1311 |
| Bse1I | ACTGG | 3 cut(s) | 26, 133, 812 |
| Bse3DI | GCAATG | 2 cut(s) | 52, 1112 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1254 |
| BseBI | CCWGG | 1 cut(s) | 9 |
| BseDI | CCNNGG | 1 cut(s) | 393 |
| BseGI | GGATG | 5 cut(s) | 107, 149, 353, 407, 748 |
| BseJI | GATNNNNATC | 1 cut(s) | 1254 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 295, 296, 444, 445, 1205, 1311 |
| BseMI | GCAATG | 2 cut(s) | 52, 1112 |
| BseMII | CTCAG | 2 cut(s) | 797, 1175 |
| BseNI | ACTGG | 3 cut(s) | 26, 133, 812 |
| BseRI | GAGGAG | 1 cut(s) | 695 |
| BseSI | GKGCMC | 1 cut(s) | 451 |
| BseXI | GCAGC | 6 cut(s) | 234, 254, 509, 536, 945, 1050 |
| BsgI | GTGCAG | 1 cut(s) | 1254 |
| Bsh1236I | CGCG | 1 cut(s) | 395 |
| BshNI | GGYRCC | 1 cut(s) | 448 |
| BslFI | GGGAC | 5 cut(s) | 314, 421, 929, 1287, 1304 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 295, 296, 444, 445, 1205, 1311 |
| BsmAI | GTCTC | 2 cut(s) | 700, 1203 |
| BsmBI | CGTCTC | 1 cut(s) | 1203 |
| BsmFI | GGGAC | 5 cut(s) | 314, 421, 929, 1287, 1304 |
| BsmI | GAATGC | 2 cut(s) | 66, 509 |
| Bsp119I | TTCGAA | 1 cut(s) | 635 |
| Bsp1286I | GDGCHC | 1 cut(s) | 451 |
| Bsp143I | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| BspACI | CCGC | 5 cut(s) | 365, 393, 395, 546, 977 |
| BspCNI | CTCAG | 2 cut(s) | 796, 1174 |
| BspFNI | CGCG | 1 cut(s) | 395 |
| BspLI | GGNNCC | 4 cut(s) | 363, 450, 831, 1184 |
| BspMAI | CTGCAG | 1 cut(s) | 554 |
| BspPI | GGATC | 2 cut(s) | 21, 1059 |
| BspT104I | TTCGAA | 1 cut(s) | 635 |
| BspT107I | GGYRCC | 1 cut(s) | 448 |
| BsrBI | CCGCTC | 1 cut(s) | 546 |
| BsrDI | GCAATG | 2 cut(s) | 52, 1112 |
| BsrI | ACTGG | 3 cut(s) | 26, 133, 812 |
| BssECI | CCNNGG | 1 cut(s) | 393 |
| BssMI | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| Bst2UI | CCWGG | 1 cut(s) | 9 |
| Bst4CI | ACNGT | 1 cut(s) | 876 |
| Bst6I | CTCTTC | 1 cut(s) | 767 |
| BstBAI | YACGTR | 3 cut(s) | 461, 1004, 1128 |
| BstBI | TTCGAA | 1 cut(s) | 635 |
| BstDEI | CTNAG | 2 cut(s) | 783, 1161 |
| BstDSI | CCRYGG | 1 cut(s) | 393 |
| BstF5I | GGATG | 5 cut(s) | 107, 149, 353, 407, 748 |
| BstFNI | CGCG | 1 cut(s) | 395 |
| BstH2I | RGCGCY | 1 cut(s) | 486 |
| BstHHI | GCGC | 2 cut(s) | 407, 485 |
| BstKTI | GATC | 5 cut(s) | 29, 214, 760, 952, 1054 |
| BstMAI | GTCTC | 2 cut(s) | 700, 1203 |
| BstMBI | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1114 |
| BstNI | CCWGG | 1 cut(s) | 9 |
| BstSCI | CCNGG | 1 cut(s) | 7 |
| BstSFI | CTRYAG | 1 cut(s) | 550 |
| BstSLI | GKGCMC | 1 cut(s) | 451 |
| BstUI | CGCG | 1 cut(s) | 395 |
| BstV1I | GCAGC | 6 cut(s) | 234, 254, 509, 536, 945, 1050 |
| BstX2I | RGATCY | 2 cut(s) | 26, 211 |
| BstYI | RGATCY | 2 cut(s) | 26, 211 |
| BtgI | CCRYGG | 1 cut(s) | 393 |
| BtrI | CACGTC | 1 cut(s) | 604 |
| BtsCI | GGATG | 5 cut(s) | 107, 149, 353, 407, 748 |
| BtsIMutI | CAGTG | 1 cut(s) | 126 |
| CfoI | GCGC | 2 cut(s) | 407, 485 |
| Cfr13I | GGNCC | 1 cut(s) | 1183 |
| Cfr42I | CCGCGG | 1 cut(s) | 396 |
| CseI | GACGC | 3 cut(s) | 423, 761, 1097 |
| Csp6I | GTAC | 2 cut(s) | 262, 1001 |
| CviAII | CATG | 4 cut(s) | 103, 338, 862, 1055 |
| CviQI | GTAC | 2 cut(s) | 262, 1001 |
| DdeI | CTNAG | 2 cut(s) | 783, 1161 |
| DpnI | GATC | 5 cut(s) | 28, 213, 759, 951, 1053 |
| DpnII | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| Eam1104I | CTCTTC | 1 cut(s) | 767 |
| EarI | CTCTTC | 1 cut(s) | 767 |
| Eco32I | GATATC | 1 cut(s) | 161 |
| Eco47I | GGWCC | 1 cut(s) | 1183 |
| Eco57I | CTGAAG | 2 cut(s) | 266, 327 |
| Eco72I | CACGTG | 1 cut(s) | 461 |
| EcoRI | GAATTC | 1 cut(s) | 794 |
| EcoRII | CCWGG | 1 cut(s) | 7 |
| EcoRV | GATATC | 1 cut(s) | 161 |
| EcoT22I | ATGCAT | 1 cut(s) | 509 |
| Esp3I | CGTCTC | 1 cut(s) | 1203 |
| FaeI | CATG | 4 cut(s) | 106, 341, 865, 1058 |
| FaqI | GGGAC | 5 cut(s) | 314, 421, 929, 1287, 1304 |
| FatI | CATG | 4 cut(s) | 102, 337, 861, 1054 |
| FauI | CCCGC | 1 cut(s) | 388 |
| FbaI | TGATCA | 1 cut(s) | 949 |
| Fnu4HI | GCNGC | 8 cut(s) | 223, 268, 365, 523, 547, 550, 959, 1064 |
| FokI | GGATG | 5 cut(s) | 94, 136, 360, 414, 755 |
| Fsp4HI | GCNGC | 8 cut(s) | 223, 268, 365, 523, 547, 550, 959, 1064 |
| GlaI | GCGC | 2 cut(s) | 406, 484 |
| GluI | GCNGC | 8 cut(s) | 223, 268, 365, 523, 547, 550, 959, 1064 |
| GsuI | CTGGAG | 3 cut(s) | 43, 86, 724 |
| HaeII | RGCGCY | 1 cut(s) | 486 |
| HgaI | GACGC | 3 cut(s) | 423, 761, 1097 |
| HhaI | GCGC | 2 cut(s) | 407, 485 |
| Hin1II | CATG | 4 cut(s) | 106, 341, 865, 1058 |
| Hin6I | GCGC | 2 cut(s) | 405, 483 |
| HinP1I | GCGC | 2 cut(s) | 405, 483 |
| HincII | GTYRAC | 1 cut(s) | 19 |
| HindII | GTYRAC | 1 cut(s) | 19 |
| HinfI | GANTC | 9 cut(s) | 176, 285, 302, 387, 665, 708, 771, 1046, 1134 |
| HphI | GGTGA | 2 cut(s) | 382, 1237 |
| Hpy166II | GTNNAC | 2 cut(s) | 19, 1186 |
| Hpy188I | TCNGA | 8 cut(s) | 246, 307, 502, 729, 793, 1024, 1051, 1264 |
| Hpy188III | TCNNGA | 4 cut(s) | 77, 477, 572, 768 |
| Hpy8I | GTNNAC | 2 cut(s) | 19, 1186 |
| Hpy99I | CGWCG | 2 cut(s) | 387, 876 |
| HpyAV | CCTTC | 4 cut(s) | 156, 241, 1087, 1269 |
| HpyCH4III | ACNGT | 1 cut(s) | 876 |
| HpyCH4IV | ACGT | 6 cut(s) | 382, 460, 603, 1003, 1127, 1212 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1114 |
| HpyF3I | CTNAG | 2 cut(s) | 783, 1161 |
| HpySE526I | ACGT | 6 cut(s) | 382, 460, 603, 1003, 1127, 1212 |
| Hsp92II | CATG | 4 cut(s) | 106, 341, 865, 1058 |
| HspAI | GCGC | 2 cut(s) | 405, 483 |
| Ksp22I | TGATCA | 1 cut(s) | 949 |
| KspI | CCGCGG | 1 cut(s) | 396 |
| Kzo9I | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| LmnI | GCTCC | 2 cut(s) | 361, 655 |
| Lsp1109I | GCAGC | 6 cut(s) | 234, 254, 509, 536, 945, 1050 |
| LweI | GCATC | 7 cut(s) | 124, 141, 234, 338, 392, 516, 877 |
| MaeII | ACGT | 6 cut(s) | 382, 460, 603, 1003, 1127, 1212 |
| MaeIII | GTNAC | 1 cut(s) | 490 |
| MalI | GATC | 5 cut(s) | 28, 213, 759, 951, 1053 |
| MbiI | CCGCTC | 1 cut(s) | 546 |
| MboI | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| MboII | GAAGA | 2 cut(s) | 754, 771 |
| MflI | RGATCY | 2 cut(s) | 26, 211 |
| MhlI | GDGCHC | 1 cut(s) | 451 |
| MlyI | GAGTC | 5 cut(s) | 296, 702, 765, 1055, 1143 |
| MmeI | TCCRAC | 4 cut(s) | 341, 579, 729, 1029 |
| Mph1103I | ATGCAT | 1 cut(s) | 509 |
| MroXI | GAANNNNTTC | 1 cut(s) | 312 |
| MseI | TTAA | 4 cut(s) | 42, 48, 168, 441 |
| MslI | CAYNNNNRTG | 1 cut(s) | 993 |
| MspA1I | CMGCKG | 2 cut(s) | 395, 846 |
| MspR9I | CCNGG | 1 cut(s) | 9 |
| Mva1269I | GAATGC | 2 cut(s) | 66, 509 |
| MvaI | CCWGG | 1 cut(s) | 9 |
| MvnI | CGCG | 1 cut(s) | 395 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1114 |
| NdeII | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| NlaIII | CATG | 4 cut(s) | 106, 341, 865, 1058 |
| NlaIV | GGNNCC | 4 cut(s) | 363, 450, 831, 1184 |
| NsiI | ATGCAT | 1 cut(s) | 509 |
| NspV | TTCGAA | 1 cut(s) | 635 |
| PctI | GAATGC | 2 cut(s) | 66, 509 |
| PdmI | GAANNNNTTC | 1 cut(s) | 312 |
| PfeI | GAWTC | 4 cut(s) | 176, 285, 387, 665 |
| PflFI | GACNNNGTC | 1 cut(s) | 711 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1205 |
| PkrI | GCNGC | 8 cut(s) | 224, 269, 366, 524, 548, 551, 960, 1065 |
| PleI | GAGTC | 5 cut(s) | 296, 702, 765, 1054, 1142 |
| PmaCI | CACGTG | 1 cut(s) | 461 |
| PmlI | CACGTG | 1 cut(s) | 461 |
| PpsI | GAGTC | 5 cut(s) | 296, 702, 765, 1054, 1142 |
| Ppu21I | YACGTR | 3 cut(s) | 461, 1004, 1128 |
| PshBI | ATTAAT | 1 cut(s) | 42 |
| PsiI | TTATAA | 1 cut(s) | 1333 |
| Psp6I | CCWGG | 1 cut(s) | 7 |
| PspCI | CACGTG | 1 cut(s) | 461 |
| PspGI | CCWGG | 1 cut(s) | 7 |
| PspN4I | GGNNCC | 4 cut(s) | 363, 450, 831, 1184 |
| PspPI | GGNCC | 1 cut(s) | 1183 |
| PstI | CTGCAG | 1 cut(s) | 554 |
| PsuI | RGATCY | 2 cut(s) | 26, 211 |
| PsyI | GACNNNGTC | 1 cut(s) | 711 |
| PvuII | CAGCTG | 1 cut(s) | 846 |
| RsaI | GTAC | 2 cut(s) | 263, 1002 |
| RsaNI | GTAC | 2 cut(s) | 262, 1001 |
| RseI | CAYNNNNRTG | 1 cut(s) | 993 |
| SacII | CCGCGG | 1 cut(s) | 396 |
| SaqAI | TTAA | 4 cut(s) | 42, 48, 168, 441 |
| SatI | GCNGC | 8 cut(s) | 223, 268, 365, 523, 547, 550, 959, 1064 |
| Sau3AI | GATC | 5 cut(s) | 26, 211, 757, 949, 1051 |
| Sau96I | GGNCC | 1 cut(s) | 1183 |
| SchI | GAGTC | 5 cut(s) | 296, 702, 765, 1055, 1143 |
| ScrFI | CCNGG | 1 cut(s) | 9 |
| SduI | GDGCHC | 1 cut(s) | 451 |
| SfaNI | GCATC | 7 cut(s) | 124, 141, 234, 338, 392, 516, 877 |
| SfcI | CTRYAG | 1 cut(s) | 550 |
| Sfr303I | CCGCGG | 1 cut(s) | 396 |
| SfuI | TTCGAA | 1 cut(s) | 635 |
| SgrBI | CCGCGG | 1 cut(s) | 396 |
| SinI | GGWCC | 1 cut(s) | 1183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 993 |
| SmlI | CTYRAG | 1 cut(s) | 526 |
| SmoI | CTYRAG | 1 cut(s) | 526 |
| SsiI | CCGC | 5 cut(s) | 365, 393, 395, 546, 977 |
| StyD4I | CCNGG | 1 cut(s) | 7 |
| TaaI | ACNGT | 1 cut(s) | 876 |
| TaiI | ACGT | 6 cut(s) | 385, 463, 606, 1006, 1130, 1215 |
| TaqI | TCGA | 5 cut(s) | 385, 635, 769, 871, 1132 |
| TatI | WGTACW | 1 cut(s) | 261 |
| TauI | GCSGC | 2 cut(s) | 367, 549 |
| TfiI | GAWTC | 4 cut(s) | 176, 285, 387, 665 |
| Tru1I | TTAA | 4 cut(s) | 42, 48, 168, 441 |
| Tru9I | TTAA | 4 cut(s) | 42, 48, 168, 441 |
| TscAI | CASTG | 1 cut(s) | 133 |
| TseI | GCWGC | 6 cut(s) | 222, 267, 522, 549, 958, 1063 |
| TspDTI | ATGAA | 8 cut(s) | 110, 138, 246, 850, 1005, 1011, 1235, 1284 |
| TspGWI | ACGGA | 1 cut(s) | 1220 |
| TspRI | CASTG | 1 cut(s) | 133 |
| Tth111I | GACNNNGTC | 1 cut(s) | 711 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1205 |
| VpaK11BI | GGWCC | 1 cut(s) | 1183 |
| VspI | ATTAAT | 1 cut(s) | 42 |
| XapI | RAATTY | 6 cut(s) | 567, 630, 718, 794, 881, 904 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 591 |
| XmnI | GAANNNNTTC | 1 cut(s) | 312 |
| Zsp2I | ATGCAT | 1 cut(s) | 509 |