TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 188 | 1.6e-55 | TIR domain |
| TIR_2 | PF13676 | 25 - 121 | 1.8e-15 | TIR domain |
| NB-ARC | PF00931 | 206 - 375 | 2.8e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 443 - 514 | 1e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 703 - 884 | 1.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 923, 1391, 2991 |
| Acc65I | GGTACC | 1 cut(s) | 3354 |
| AccB1I | GGYRCC | 1 cut(s) | 3354 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2734 |
| AccI | GTMKAC | 2 cut(s) | 128, 3027 |
| AccII | CGCG | 1 cut(s) | 2556 |
| AciI | CCGC | 2 cut(s) | 421, 992 |
| AclWI | GGATC | 6 cut(s) | 353, 366, 869, 948, 1660, 3321 |
| AcoI | YGGCCR | 1 cut(s) | 118 |
| AcuI | CTGAAG | 2 cut(s) | 348, 2675 |
| AfaI | GTAC | 7 cut(s) | 1787, 2376, 2823, 3107, 3356, 3471, 3501 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 276, 797, 1135, 2661, 2734, 2788 |
| AflIII | ACRYGT | 2 cut(s) | 101, 1594 |
| AgeI | ACCGGT | 1 cut(s) | 2377 |
| AhlI | ACTAGT | 1 cut(s) | 3229 |
| AjnI | CCWGG | 3 cut(s) | 441, 1552, 2827 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2921, 2953 |
| Alw21I | GWGCWC | 1 cut(s) | 1446 |
| Alw26I | GTCTC | 2 cut(s) | 2406, 3133 |
| AlwI | GGATC | 6 cut(s) | 353, 366, 869, 948, 1660, 3321 |
| AoxI | GGCC | 5 cut(s) | 118, 338, 1183, 1633, 1683 |
| ApeKI | GCWGC | 5 cut(s) | 387, 476, 2238, 2263, 2622 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 318, 350 |
| AseI | ATTAAT | 1 cut(s) | 3033 |
| AsiGI | ACCGGT | 1 cut(s) | 2377 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 822, 1115, 1272, 2929, 3324 |
| Asp718I | GGTACC | 1 cut(s) | 3354 |
| AspLEI | GCGC | 1 cut(s) | 3375 |
| AspS9I | GGNCC | 4 cut(s) | 200, 339, 439, 2665 |
| AsuC2I | CCSGG | 3 cut(s) | 620, 1949, 3081 |
| AsuHPI | GGTGA | 7 cut(s) | 104, 1484, 1533, 1568, 2461, 3050, 3449 |
| AvaII | GGWCC | 3 cut(s) | 200, 439, 2665 |
| AxyI | CCTNAGG | 1 cut(s) | 1134 |
| BalI | TGGCCA | 1 cut(s) | 120 |
| BamHI | GGATCC | 1 cut(s) | 358 |
| BanI | GGYRCC | 1 cut(s) | 3354 |
| BauI | CACGAG | 1 cut(s) | 612 |
| BbsI | GAAGAC | 2 cut(s) | 143, 1515 |
| Bbv12I | GWGCWC | 1 cut(s) | 1446 |
| BbvCI | CCTCAGC | 2 cut(s) | 396, 1680 |
| BbvI | GCAGC | 5 cut(s) | 399, 488, 2250, 2250, 2609 |
| BccI | CCATC | 5 cut(s) | 447, 486, 1819, 2963, 3563 |
| BciT130I | CCWGG | 3 cut(s) | 443, 1554, 2829 |
| BciVI | GTATCC | 1 cut(s) | 603 |
| BclI | TGATCA | 4 cut(s) | 2785, 2875, 3262, 3409 |
| BcnI | CCSGG | 3 cut(s) | 620, 1949, 3081 |
| BcoDI | GTCTC | 2 cut(s) | 2406, 3133 |
| BcuI | ACTAGT | 1 cut(s) | 3229 |
| BfaI | CTAG | 5 cut(s) | 480, 1017, 2204, 3195, 3230 |
| BfmI | CTRYAG | 1 cut(s) | 597 |
| BfuI | GTATCC | 1 cut(s) | 603 |
| BglII | AGATCT | 2 cut(s) | 546, 3277 |
| BisI | GCNGC | 5 cut(s) | 388, 477, 2239, 2264, 2623 |
| BlpI | GCTNAGC | 1 cut(s) | 860 |
| BlsI | GCNGC | 5 cut(s) | 389, 478, 2240, 2265, 2624 |
| Bme1390I | CCNGG | 6 cut(s) | 443, 620, 1554, 1949, 2829, 3081 |
| Bme18I | GGWCC | 3 cut(s) | 200, 439, 2665 |
| BmgT120I | GGNCC | 4 cut(s) | 200, 339, 439, 2665 |
| BmiI | GGNNCC | 7 cut(s) | 360, 1775, 2032, 2176, 2666, 3356, 3382 |
| BmrFI | CCNGG | 6 cut(s) | 443, 620, 1554, 1949, 2829, 3081 |
| BmrI | ACTGGG | 1 cut(s) | 1418 |
| BmsI | GCATC | 6 cut(s) | 275, 415, 1240, 2250, 2768, 2875 |
| BmuI | ACTGGG | 1 cut(s) | 1418 |
| BpiI | GAAGAC | 2 cut(s) | 143, 1515 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 448, 480 |
| BpmI | CTGGAG | 1 cut(s) | 2168 |
| Bpu10I | CCTNAGC | 3 cut(s) | 396, 1680, 2388 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 860 |
| BpuEI | CTTGAG | 3 cut(s) | 100, 932, 2291 |
| BpuMI | CCSGG | 3 cut(s) | 620, 1949, 3081 |
| Bsa29I | ATCGAT | 1 cut(s) | 739 |
| BsaAI | YACGTR | 1 cut(s) | 104 |
| BsaBI | GATNNNNATC | 3 cut(s) | 174, 939, 1026 |
| BsaJI | CCNNGG | 5 cut(s) | 2178, 3080, 3376, 3384, 3495 |
| BsaWI | WCCGGW | 2 cut(s) | 2377, 3240 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 276, 797, 1135, 2661, 2734, 2788 |
| Bse118I | RCCGGY | 1 cut(s) | 2377 |
| Bse1I | ACTGG | 4 cut(s) | 121, 609, 1424, 1927 |
| Bse21I | CCTNAGG | 1 cut(s) | 1134 |
| Bse3DI | GCAATG | 3 cut(s) | 408, 871, 1353 |
| Bse8I | GATNNNNATC | 3 cut(s) | 174, 939, 1026 |
| BseBI | CCWGG | 3 cut(s) | 443, 1554, 2829 |
| BseCI | ATCGAT | 1 cut(s) | 739 |
| BseDI | CCNNGG | 5 cut(s) | 2178, 3080, 3376, 3384, 3495 |
| BseJI | GATNNNNATC | 3 cut(s) | 174, 939, 1026 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 276, 797, 1135, 2661, 2734, 2788 |
| BseMI | GCAATG | 3 cut(s) | 408, 871, 1353 |
| BseMII | CTCAG | 7 cut(s) | 387, 851, 1671, 1720, 1971, 2379, 2385 |
| BseNI | ACTGG | 4 cut(s) | 121, 609, 1424, 1927 |
| BseRI | GAGGAG | 1 cut(s) | 284 |
| BseXI | GCAGC | 5 cut(s) | 399, 488, 2250, 2250, 2609 |
| BsgI | GTGCAG | 1 cut(s) | 467 |
| Bsh1236I | CGCG | 1 cut(s) | 2556 |
| BshFI | GGCC | 5 cut(s) | 120, 340, 1185, 1635, 1685 |
| BshNI | GGYRCC | 1 cut(s) | 3354 |
| BshTI | ACCGGT | 1 cut(s) | 2377 |
| BshVI | ATCGAT | 1 cut(s) | 739 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1446 |
| BsiSI | CCGG | 5 cut(s) | 619, 1949, 2378, 3080, 3241 |
| BslFI | GGGAC | 3 cut(s) | 1441, 1890, 2678 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 276, 797, 1135, 2661, 2734, 2788 |
| BsmAI | GTCTC | 2 cut(s) | 2406, 3133 |
| BsmFI | GGGAC | 3 cut(s) | 1441, 1890, 2678 |
| BsmI | GAATGC | 1 cut(s) | 2717 |
| BsnI | GGCC | 5 cut(s) | 120, 340, 1185, 1635, 1685 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1446 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 860 |
| Bsp19I | CCATGG | 1 cut(s) | 2178 |
| BspACI | CCGC | 2 cut(s) | 421, 992 |
| BspANI | GGCC | 5 cut(s) | 120, 340, 1185, 1635, 1685 |
| BspCNI | CTCAG | 7 cut(s) | 388, 852, 1672, 1719, 1970, 2380, 2384 |
| BspDI | ATCGAT | 1 cut(s) | 739 |
| BspFNI | CGCG | 1 cut(s) | 2556 |
| BspHI | TCATGA | 3 cut(s) | 2017, 2878, 3058 |
| BspLI | GGNNCC | 7 cut(s) | 360, 1775, 2032, 2176, 2666, 3356, 3382 |
| BspPI | GGATC | 6 cut(s) | 353, 366, 869, 948, 1660, 3321 |
| BspQI | GCTCTTC | 1 cut(s) | 3147 |
| BspT107I | GGYRCC | 1 cut(s) | 3354 |
| BsrDI | GCAATG | 3 cut(s) | 408, 871, 1353 |
| BsrFI | RCCGGY | 1 cut(s) | 2377 |
| BsrI | ACTGG | 4 cut(s) | 121, 609, 1424, 1927 |
| BssAI | RCCGGY | 1 cut(s) | 2377 |
| BssECI | CCNNGG | 5 cut(s) | 2178, 3080, 3376, 3384, 3495 |
| BssNAI | GTATAC | 1 cut(s) | 129 |
| BssSI | CACGAG | 1 cut(s) | 612 |
| BssT1I | CCWWGG | 4 cut(s) | 2178, 3376, 3384, 3495 |
| Bst1107I | GTATAC | 1 cut(s) | 129 |
| Bst2BI | CACGAG | 1 cut(s) | 612 |
| Bst2UI | CCWGG | 3 cut(s) | 443, 1554, 2829 |
| Bst4CI | ACNGT | 4 cut(s) | 706, 1204, 1881, 3144 |
| Bst6I | CTCTTC | 6 cut(s) | 186, 537, 828, 1233, 1656, 3147 |
| BstBAI | YACGTR | 1 cut(s) | 104 |
| BstC8I | GCNNGC | 3 cut(s) | 7, 1164, 1732 |
| BstDSI | CCRYGG | 1 cut(s) | 2178 |
| BstFNI | CGCG | 1 cut(s) | 2556 |
| BstHHI | GCGC | 1 cut(s) | 3375 |
| BstMAI | GTCTC | 2 cut(s) | 2406, 3133 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2948 |
| BstNI | CCWGG | 3 cut(s) | 443, 1554, 2829 |
| BstNSI | RCATGY | 2 cut(s) | 1362, 1598 |
| BstSCI | CCNGG | 6 cut(s) | 441, 618, 1552, 1947, 2827, 3079 |
| BstSFI | CTRYAG | 1 cut(s) | 597 |
| BstUI | CGCG | 1 cut(s) | 2556 |
| BstV1I | GCAGC | 5 cut(s) | 399, 488, 2250, 2250, 2609 |
| BstV2I | GAAGAC | 2 cut(s) | 143, 1515 |
| BstX2I | RGATCY | 4 cut(s) | 358, 546, 1665, 3277 |
| BstYI | RGATCY | 4 cut(s) | 358, 546, 1665, 3277 |
| BstZ17I | GTATAC | 1 cut(s) | 129 |
| Bsu15I | ATCGAT | 1 cut(s) | 739 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1134 |
| BsuI | GTATCC | 1 cut(s) | 603 |
| BsuRI | GGCC | 5 cut(s) | 120, 340, 1185, 1635, 1685 |
| BsuTUI | ATCGAT | 1 cut(s) | 739 |
| BtgI | CCRYGG | 1 cut(s) | 2178 |
| BtsI | GCAGTG | 2 cut(s) | 1446, 2546 |
| BtsIMutI | CAGTG | 7 cut(s) | 1446, 2111, 2546, 2699, 2821, 2926, 3149 |
| Cac8I | GCNNGC | 3 cut(s) | 7, 1164, 1732 |
| CciI | TCATGA | 3 cut(s) | 2017, 2878, 3058 |
| CfoI | GCGC | 1 cut(s) | 3375 |
| Cfr10I | RCCGGY | 1 cut(s) | 2377 |
| Cfr13I | GGNCC | 4 cut(s) | 200, 339, 439, 2665 |
| ClaI | ATCGAT | 1 cut(s) | 739 |
| CseI | GACGC | 1 cut(s) | 1520 |
| CsiI | ACCWGGT | 2 cut(s) | 441, 1552 |
| Csp6I | GTAC | 7 cut(s) | 1786, 2375, 2822, 3106, 3355, 3470, 3500 |
| CspAI | ACCGGT | 1 cut(s) | 2377 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2080, 2115 |
| CviQI | GTAC | 7 cut(s) | 1786, 2375, 2822, 3106, 3355, 3470, 3500 |
| EaeI | YGGCCR | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 6 cut(s) | 186, 537, 828, 1233, 1656, 3147 |
| EarI | CTCTTC | 6 cut(s) | 186, 537, 828, 1233, 1656, 3147 |
| Eco130I | CCWWGG | 4 cut(s) | 2178, 3376, 3384, 3495 |
| Eco147I | AGGCCT | 3 cut(s) | 1185, 1635, 1685 |
| Eco47I | GGWCC | 3 cut(s) | 200, 439, 2665 |
| Eco57I | CTGAAG | 2 cut(s) | 348, 2675 |
| Eco81I | CCTNAGG | 1 cut(s) | 1134 |
| EcoRI | GAATTC | 3 cut(s) | 1111, 1272, 2929 |
| EcoRII | CCWGG | 3 cut(s) | 441, 1552, 2827 |
| EcoT14I | CCWWGG | 4 cut(s) | 2178, 3376, 3384, 3495 |
| EcoT22I | ATGCAT | 5 cut(s) | 268, 408, 630, 1255, 1497 |
| ErhI | CCWWGG | 4 cut(s) | 2178, 3376, 3384, 3495 |
| FaqI | GGGAC | 3 cut(s) | 1441, 1890, 2678 |
| FauI | CCCGC | 1 cut(s) | 985 |
| FbaI | TGATCA | 4 cut(s) | 2785, 2875, 3262, 3409 |
| FblI | GTMKAC | 2 cut(s) | 128, 3027 |
| Fnu4HI | GCNGC | 5 cut(s) | 388, 477, 2239, 2264, 2623 |
| Fsp4HI | GCNGC | 5 cut(s) | 388, 477, 2239, 2264, 2623 |
| FspBI | CTAG | 5 cut(s) | 480, 1017, 2204, 3195, 3230 |
| GlaI | GCGC | 1 cut(s) | 3374 |
| GluI | GCNGC | 5 cut(s) | 388, 477, 2239, 2264, 2623 |
| GsuI | CTGGAG | 1 cut(s) | 2168 |
| HaeIII | GGCC | 5 cut(s) | 120, 340, 1185, 1635, 1685 |
| HapII | CCGG | 5 cut(s) | 619, 1949, 2378, 3080, 3241 |
| HgaI | GACGC | 1 cut(s) | 1520 |
| HhaI | GCGC | 1 cut(s) | 3375 |
| Hin6I | GCGC | 1 cut(s) | 3373 |
| HinP1I | GCGC | 1 cut(s) | 3373 |
| HincII | GTYRAC | 1 cut(s) | 2313 |
| HindII | GTYRAC | 1 cut(s) | 2313 |
| HindIII | AAGCTT | 3 cut(s) | 1089, 2042, 3213 |
| HpaII | CCGG | 5 cut(s) | 619, 1949, 2378, 3080, 3241 |
| HphI | GGTGA | 7 cut(s) | 104, 1484, 1533, 1568, 2461, 3050, 3449 |
| Hpy166II | GTNNAC | 5 cut(s) | 129, 1559, 2313, 2463, 3028 |
| Hpy8I | GTNNAC | 5 cut(s) | 129, 1559, 2313, 2463, 3028 |
| HpyCH4III | ACNGT | 4 cut(s) | 706, 1204, 1881, 3144 |
| HpyCH4IV | ACGT | 7 cut(s) | 103, 1870, 2321, 2396, 2513, 3108, 3343 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2948 |
| HpySE526I | ACGT | 7 cut(s) | 103, 1870, 2321, 2396, 2513, 3108, 3343 |
| HspAI | GCGC | 1 cut(s) | 3373 |
| KpnI | GGTACC | 1 cut(s) | 3358 |
| Ksp22I | TGATCA | 4 cut(s) | 2785, 2875, 3262, 3409 |
| LguI | GCTCTTC | 1 cut(s) | 3147 |
| LmnI | GCTCC | 2 cut(s) | 2697, 3380 |
| Lsp1109I | GCAGC | 5 cut(s) | 399, 488, 2250, 2250, 2609 |
| LweI | GCATC | 6 cut(s) | 275, 415, 1240, 2250, 2768, 2875 |
| MabI | ACCWGGT | 2 cut(s) | 441, 1552 |
| MaeI | CTAG | 5 cut(s) | 480, 1017, 2204, 3195, 3230 |
| MaeII | ACGT | 7 cut(s) | 103, 1870, 2321, 2396, 2513, 3108, 3343 |
| MaeIII | GTNAC | 3 cut(s) | 65, 1412, 2531 |
| MfeI | CAATTG | 3 cut(s) | 729, 809, 1467 |
| MflI | RGATCY | 4 cut(s) | 358, 546, 1665, 3277 |
| MhlI | GDGCHC | 1 cut(s) | 1446 |
| MlsI | TGGCCA | 1 cut(s) | 120 |
| MluNI | TGGCCA | 1 cut(s) | 120 |
| MlyI | GAGTC | 4 cut(s) | 236, 2015, 2415, 3033 |
| MmeI | TCCRAC | 8 cut(s) | 1088, 1720, 2008, 2349, 2389, 2534, 2894, 3250 |
| Mox20I | TGGCCA | 1 cut(s) | 120 |
| Mph1103I | ATGCAT | 5 cut(s) | 268, 408, 630, 1255, 1497 |
| MroXI | GAANNNNTTC | 5 cut(s) | 822, 1115, 1272, 2929, 3324 |
| MscI | TGGCCA | 1 cut(s) | 120 |
| MslI | CAYNNNNRTG | 3 cut(s) | 411, 1584, 1674 |
| Msp20I | TGGCCA | 1 cut(s) | 120 |
| MspI | CCGG | 5 cut(s) | 619, 1949, 2378, 3080, 3241 |
| MspR9I | CCNGG | 6 cut(s) | 443, 620, 1554, 1949, 2829, 3081 |
| MunI | CAATTG | 3 cut(s) | 729, 809, 1467 |
| Mva1269I | GAATGC | 1 cut(s) | 2717 |
| MvaI | CCWGG | 3 cut(s) | 443, 1554, 2829 |
| MvnI | CGCG | 1 cut(s) | 2556 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2948 |
| NciI | CCSGG | 3 cut(s) | 620, 1949, 3081 |
| NcoI | CCATGG | 1 cut(s) | 2178 |
| NlaIV | GGNNCC | 7 cut(s) | 360, 1775, 2032, 2176, 2666, 3356, 3382 |
| NmuCI | GTSAC | 1 cut(s) | 1412 |
| NsiI | ATGCAT | 5 cut(s) | 268, 408, 630, 1255, 1497 |
| NspI | RCATGY | 2 cut(s) | 1362, 1598 |
| PagI | TCATGA | 3 cut(s) | 2017, 2878, 3058 |
| PceI | AGGCCT | 3 cut(s) | 1185, 1635, 1685 |
| PciI | ACATGT | 1 cut(s) | 1594 |
| PciSI | GCTCTTC | 1 cut(s) | 3147 |
| PctI | GAATGC | 1 cut(s) | 2717 |
| PdmI | GAANNNNTTC | 5 cut(s) | 822, 1115, 1272, 2929, 3324 |
| PflFI | GACNNNGTC | 1 cut(s) | 2320 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2734 |
| PfoI | TCCNGGA | 3 cut(s) | 618, 1947, 2827 |
| PinAI | ACCGGT | 1 cut(s) | 2377 |
| PkrI | GCNGC | 5 cut(s) | 389, 478, 2240, 2265, 2624 |
| PleI | GAGTC | 4 cut(s) | 235, 2015, 2414, 3032 |
| PpsI | GAGTC | 4 cut(s) | 235, 2015, 2414, 3032 |
| Ppu21I | YACGTR | 1 cut(s) | 104 |
| PscI | ACATGT | 1 cut(s) | 1594 |
| PshBI | ATTAAT | 1 cut(s) | 3033 |
| PsiI | TTATAA | 3 cut(s) | 923, 1391, 2991 |
| Psp6I | CCWGG | 3 cut(s) | 441, 1552, 2827 |
| PspGI | CCWGG | 3 cut(s) | 441, 1552, 2827 |
| PspN4I | GGNNCC | 7 cut(s) | 360, 1775, 2032, 2176, 2666, 3356, 3382 |
| PspPI | GGNCC | 4 cut(s) | 200, 339, 439, 2665 |
| PsuI | RGATCY | 4 cut(s) | 358, 546, 1665, 3277 |
| PsyI | GACNNNGTC | 1 cut(s) | 2320 |
| RsaI | GTAC | 7 cut(s) | 1787, 2376, 2823, 3107, 3356, 3471, 3501 |
| RsaNI | GTAC | 7 cut(s) | 1786, 2375, 2822, 3106, 3355, 3470, 3500 |
| RseI | CAYNNNNRTG | 3 cut(s) | 411, 1584, 1674 |
| SapI | GCTCTTC | 1 cut(s) | 3147 |
| SatI | GCNGC | 5 cut(s) | 388, 477, 2239, 2264, 2623 |
| Sau96I | GGNCC | 4 cut(s) | 200, 339, 439, 2665 |
| SchI | GAGTC | 4 cut(s) | 236, 2015, 2415, 3033 |
| ScrFI | CCNGG | 6 cut(s) | 443, 620, 1554, 1949, 2829, 3081 |
| SduI | GDGCHC | 1 cut(s) | 1446 |
| SexAI | ACCWGGT | 2 cut(s) | 441, 1552 |
| SfaNI | GCATC | 6 cut(s) | 275, 415, 1240, 2250, 2768, 2875 |
| SfcI | CTRYAG | 1 cut(s) | 597 |
| SinI | GGWCC | 3 cut(s) | 200, 439, 2665 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 411, 1584, 1674 |
| SmlI | CTYRAG | 3 cut(s) | 79, 947, 2270 |
| SmoI | CTYRAG | 3 cut(s) | 79, 947, 2270 |
| SpeI | ACTAGT | 1 cut(s) | 3229 |
| SseBI | AGGCCT | 3 cut(s) | 1185, 1635, 1685 |
| SsiI | CCGC | 2 cut(s) | 421, 992 |
| SspI | AATATT | 3 cut(s) | 535, 2839, 3048 |
| SspMI | CTAG | 5 cut(s) | 480, 1017, 2204, 3195, 3230 |
| StuI | AGGCCT | 3 cut(s) | 1185, 1635, 1685 |
| StyD4I | CCNGG | 6 cut(s) | 441, 618, 1552, 1947, 2827, 3079 |
| StyI | CCWWGG | 4 cut(s) | 2178, 3376, 3384, 3495 |
| TaaI | ACNGT | 4 cut(s) | 706, 1204, 1881, 3144 |
| TaiI | ACGT | 7 cut(s) | 106, 1873, 2324, 2399, 2516, 3111, 3346 |
| TaqII | GACCGA | 1 cut(s) | 1143 |
| TatI | WGTACW | 1 cut(s) | 2821 |
| TscAI | CASTG | 7 cut(s) | 1446, 2118, 2546, 2699, 2821, 2926, 3149 |
| TseFI | GTSAC | 1 cut(s) | 1412 |
| TseI | GCWGC | 5 cut(s) | 387, 476, 2238, 2263, 2622 |
| Tsp45I | GTSAC | 1 cut(s) | 1412 |
| TspRI | CASTG | 7 cut(s) | 1446, 2118, 2546, 2699, 2821, 2926, 3149 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2320 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2734 |
| VpaK11BI | GGWCC | 3 cut(s) | 200, 439, 2665 |
| VspI | ATTAAT | 1 cut(s) | 3033 |
| XbaI | TCTAGA | 2 cut(s) | 2203, 3194 |
| XceI | RCATGY | 2 cut(s) | 1362, 1598 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 280 |
| XmiI | GTMKAC | 2 cut(s) | 128, 3027 |
| XmnI | GAANNNNTTC | 5 cut(s) | 822, 1115, 1272, 2929, 3324 |
| XspI | CTAG | 5 cut(s) | 480, 1017, 2204, 3195, 3230 |
| Zsp2I | ATGCAT | 5 cut(s) | 268, 408, 630, 1255, 1497 |