NB-ARC domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 17 - 181 | 1.4e-55 | TIR domain |
| TIR_2 | PF13676 | 19 - 115 | 3.5e-18 | TIR domain |
| NB-ARC | PF00931 | 209 - 369 | 2.7e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 438 - 505 | 6.7e-23 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 684 - 778 | 1.4e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 693 - 832 | 5e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 1062, 1290, 1691, 2264, 2792 |
| Acc36I | ACCTGC | 1 cut(s) | 1703 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2897 |
| AccI | GTMKAC | 1 cut(s) | 99 |
| AccIII | TCCGGA | 1 cut(s) | 1931 |
| AciI | CCGC | 5 cut(s) | 403, 1357, 2345, 2766, 2922 |
| AclWI | GGATC | 5 cut(s) | 335, 348, 1298, 1741, 1754 |
| AcoI | YGGCCR | 1 cut(s) | 320 |
| AcsI | RAATTY | 7 cut(s) | 503, 1272, 1618, 1864, 1888, 1904, 2753 |
| AcuI | CTGAAG | 5 cut(s) | 1066, 1980, 2213, 2382, 2910 |
| AfaI | GTAC | 4 cut(s) | 543, 1419, 1952, 2560 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 42, 258, 1946, 2000, 2897 |
| AflII | CTTAAG | 2 cut(s) | 2026, 2120 |
| AjnI | CCWGG | 3 cut(s) | 1525, 2176, 2454 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 2435, 2467, 2478, 2510, 2516, 2548, 2880, 2912 |
| AleI | CACNNNNGTG | 1 cut(s) | 2028 |
| Alw26I | GTCTC | 2 cut(s) | 1102, 1446 |
| AlwI | GGATC | 5 cut(s) | 335, 348, 1298, 1741, 1754 |
| Ama87I | CYCGRG | 1 cut(s) | 594 |
| Aor13HI | TCCGGA | 1 cut(s) | 1931 |
| AoxI | GGCC | 7 cut(s) | 320, 778, 1159, 1757, 2702, 2776, 2802 |
| ApaI | GGGCCC | 1 cut(s) | 2806 |
| ApeKI | GCWGC | 8 cut(s) | 197, 443, 458, 1226, 1830, 1899, 2277, 2763 |
| ApoI | RAATTY | 7 cut(s) | 503, 1272, 1618, 1864, 1888, 1904, 2753 |
| AseI | ATTAAT | 1 cut(s) | 1029 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1500, 2094 |
| AspLEI | GCGC | 2 cut(s) | 538, 2910 |
| AspS9I | GGNCC | 4 cut(s) | 928, 2257, 2802, 2803 |
| AsuHPI | GGTGA | 3 cut(s) | 86, 850, 1982 |
| AsuII | TTCGAA | 1 cut(s) | 355 |
| AvaI | CYCGRG | 1 cut(s) | 594 |
| AvaII | GGWCC | 2 cut(s) | 928, 2257 |
| BaeGI | GKGCMC | 1 cut(s) | 2806 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2608, 2641 |
| BalI | TGGCCA | 1 cut(s) | 322 |
| BamHI | GGATCC | 2 cut(s) | 340, 1746 |
| BanII | GRGCYC | 1 cut(s) | 2806 |
| BbsI | GAAGAC | 1 cut(s) | 1537 |
| BbvI | GCAGC | 8 cut(s) | 209, 455, 470, 1213, 1842, 1886, 2289, 2775 |
| BccI | CCATC | 5 cut(s) | 767, 1442, 1792, 2840, 2926 |
| BciT130I | CCWGG | 3 cut(s) | 1527, 2178, 2456 |
| BciVI | GTATCC | 3 cut(s) | 73, 2609, 2794 |
| BcoDI | GTCTC | 2 cut(s) | 1102, 1446 |
| BfaI | CTAG | 5 cut(s) | 782, 818, 902, 1184, 2046 |
| BfmI | CTRYAG | 1 cut(s) | 2761 |
| BfrI | CTTAAG | 2 cut(s) | 2026, 2120 |
| BfuAI | ACCTGC | 1 cut(s) | 1703 |
| BfuI | GTATCC | 3 cut(s) | 73, 2609, 2794 |
| BglII | AGATCT | 1 cut(s) | 2081 |
| BisI | GCNGC | 9 cut(s) | 198, 444, 459, 1227, 1831, 1900, 2278, 2764, 2767 |
| BlsI | GCNGC | 9 cut(s) | 199, 445, 460, 1228, 1832, 1901, 2279, 2765, 2768 |
| BmcAI | AGTACT | 2 cut(s) | 543, 1419 |
| Bme1390I | CCNGG | 3 cut(s) | 1527, 2178, 2456 |
| Bme18I | GGWCC | 2 cut(s) | 928, 2257 |
| BmeT110I | CYCGRG | 1 cut(s) | 594 |
| BmgT120I | GGNCC | 4 cut(s) | 928, 2257, 2802, 2803 |
| BmiI | GGNNCC | 6 cut(s) | 342, 1189, 1748, 2803, 2804, 2889 |
| BmrFI | CCNGG | 3 cut(s) | 1527, 2178, 2456 |
| BmrI | ACTGGG | 2 cut(s) | 572, 1856 |
| BmsI | GCATC | 5 cut(s) | 130, 257, 1455, 1926, 2420 |
| BmuI | ACTGGG | 2 cut(s) | 572, 1856 |
| BpiI | GAAGAC | 1 cut(s) | 1537 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 430, 462, 2027, 2059 |
| BpmI | CTGGAG | 2 cut(s) | 969, 1734 |
| Bpu14I | TTCGAA | 1 cut(s) | 355 |
| BpuEI | CTTGAG | 6 cut(s) | 1140, 1262, 2072, 2098, 2580, 2663 |
| BsaBI | GATNNNNATC | 2 cut(s) | 221, 918 |
| BsaWI | WCCGGW | 1 cut(s) | 1931 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 768, 798 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 42, 258, 1946, 2000, 2897 |
| Bse1I | ACTGG | 3 cut(s) | 578, 931, 1851 |
| Bse3DI | GCAATG | 2 cut(s) | 160, 1329 |
| Bse8I | GATNNNNATC | 2 cut(s) | 221, 918 |
| BseAI | TCCGGA | 1 cut(s) | 1931 |
| BseBI | CCWGG | 3 cut(s) | 1527, 2178, 2456 |
| BseGI | GGATG | 8 cut(s) | 248, 274, 643, 1470, 1784, 1917, 2435, 2918 |
| BseJI | GATNNNNATC | 2 cut(s) | 221, 918 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 42, 258, 1946, 2000, 2897 |
| BseMI | GCAATG | 2 cut(s) | 160, 1329 |
| BseMII | CTCAG | 5 cut(s) | 1512, 2025, 2086, 2233, 2711 |
| BseNI | ACTGG | 3 cut(s) | 578, 931, 1851 |
| BseRI | GAGGAG | 1 cut(s) | 7 |
| BseSI | GKGCMC | 1 cut(s) | 2806 |
| BseXI | GCAGC | 8 cut(s) | 209, 455, 470, 1213, 1842, 1886, 2289, 2775 |
| BseYI | CCCAGC | 1 cut(s) | 470 |
| BsgI | GTGCAG | 2 cut(s) | 535, 1125 |
| BshFI | GGCC | 7 cut(s) | 322, 780, 1161, 1759, 2704, 2778, 2804 |
| BsiHKCI | CYCGRG | 1 cut(s) | 594 |
| BsiSI | CCGG | 2 cut(s) | 1932, 2775 |
| BslFI | GGGAC | 1 cut(s) | 2158 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 42, 258, 1946, 2000, 2897 |
| BsmAI | GTCTC | 2 cut(s) | 1102, 1446 |
| BsmFI | GGGAC | 1 cut(s) | 2158 |
| BsmI | GAATGC | 2 cut(s) | 1096, 1654 |
| BsnI | GGCC | 7 cut(s) | 322, 780, 1161, 1759, 2704, 2778, 2804 |
| BsoBI | CYCGRG | 1 cut(s) | 594 |
| Bsp119I | TTCGAA | 1 cut(s) | 355 |
| Bsp120I | GGGCCC | 1 cut(s) | 2802 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2806 |
| Bsp13I | TCCGGA | 1 cut(s) | 1931 |
| Bsp1407I | TGTACA | 1 cut(s) | 2558 |
| Bsp143I | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| BspACI | CCGC | 5 cut(s) | 403, 1357, 2345, 2766, 2922 |
| BspANI | GGCC | 7 cut(s) | 322, 780, 1161, 1759, 2704, 2778, 2804 |
| BspCNI | CTCAG | 5 cut(s) | 1513, 2026, 2085, 2232, 2712 |
| BspEI | TCCGGA | 1 cut(s) | 1931 |
| BspHI | TCATGA | 5 cut(s) | 394, 409, 511, 1552, 2629 |
| BspLI | GGNNCC | 6 cut(s) | 342, 1189, 1748, 2803, 2804, 2889 |
| BspMAI | CTGCAG | 1 cut(s) | 2765 |
| BspMI | ACCTGC | 1 cut(s) | 1703 |
| BspPI | GGATC | 5 cut(s) | 335, 348, 1298, 1741, 1754 |
| BspT104I | TTCGAA | 1 cut(s) | 355 |
| BspTI | CTTAAG | 2 cut(s) | 2026, 2120 |
| BsrDI | GCAATG | 2 cut(s) | 160, 1329 |
| BsrGI | TGTACA | 1 cut(s) | 2558 |
| BsrI | ACTGG | 3 cut(s) | 578, 931, 1851 |
| BssMI | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| Bst2UI | CCWGG | 3 cut(s) | 1527, 2178, 2456 |
| Bst4CI | ACNGT | 7 cut(s) | 316, 688, 1075, 1545, 1776, 1970, 2202 |
| Bst6I | CTCTTC | 6 cut(s) | 25, 36, 201, 821, 1085, 2315 |
| BstAFI | CTTAAG | 2 cut(s) | 2026, 2120 |
| BstAUI | TGTACA | 1 cut(s) | 2558 |
| BstBI | TTCGAA | 1 cut(s) | 355 |
| BstC8I | GCNNGC | 2 cut(s) | 2117, 2912 |
| BstDEI | CTNAG | 8 cut(s) | 1401, 1521, 1679, 1945, 2034, 2072, 2219, 2720 |
| BstF5I | GGATG | 8 cut(s) | 248, 274, 643, 1470, 1784, 1917, 2435, 2918 |
| BstHHI | GCGC | 2 cut(s) | 538, 2910 |
| BstKTI | GATC | 4 cut(s) | 343, 1306, 1749, 2084 |
| BstMAI | GTCTC | 2 cut(s) | 1102, 1446 |
| BstMBI | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 467, 1522, 2404, 2775 |
| BstNI | CCWGG | 3 cut(s) | 1527, 2178, 2456 |
| BstNSI | RCATGY | 1 cut(s) | 421 |
| BstSCI | CCNGG | 3 cut(s) | 1525, 2176, 2454 |
| BstSFI | CTRYAG | 1 cut(s) | 2761 |
| BstSLI | GKGCMC | 1 cut(s) | 2806 |
| BstV1I | GCAGC | 8 cut(s) | 209, 455, 470, 1213, 1842, 1886, 2289, 2775 |
| BstV2I | GAAGAC | 1 cut(s) | 1537 |
| BstX2I | RGATCY | 4 cut(s) | 340, 1303, 1746, 2081 |
| BstYI | RGATCY | 4 cut(s) | 340, 1303, 1746, 2081 |
| BsuI | GTATCC | 3 cut(s) | 73, 2609, 2794 |
| BsuRI | GGCC | 7 cut(s) | 322, 780, 1161, 1759, 2704, 2778, 2804 |
| BtsCI | GGATG | 8 cut(s) | 248, 274, 643, 1470, 1784, 1917, 2435, 2918 |
| BtsI | GCAGTG | 2 cut(s) | 2181, 2873 |
| BtsIMutI | CAGTG | 4 cut(s) | 118, 2181, 2227, 2873 |
| BveI | ACCTGC | 1 cut(s) | 1703 |
| Cac8I | GCNNGC | 2 cut(s) | 2117, 2912 |
| CciI | TCATGA | 5 cut(s) | 394, 409, 511, 1552, 2629 |
| CfoI | GCGC | 2 cut(s) | 538, 2910 |
| Cfr13I | GGNCC | 4 cut(s) | 928, 2257, 2802, 2803 |
| Csp6I | GTAC | 4 cut(s) | 542, 1418, 1951, 2559 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2849, 2884 |
| CviQI | GTAC | 4 cut(s) | 542, 1418, 1951, 2559 |
| DdeI | CTNAG | 8 cut(s) | 1401, 1521, 1679, 1945, 2034, 2072, 2219, 2720 |
| DpnI | GATC | 4 cut(s) | 342, 1305, 1748, 2083 |
| DpnII | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| DraI | TTTAAA | 1 cut(s) | 1345 |
| EaeI | YGGCCR | 1 cut(s) | 320 |
| Eam1104I | CTCTTC | 6 cut(s) | 25, 36, 201, 821, 1085, 2315 |
| EarI | CTCTTC | 6 cut(s) | 25, 36, 201, 821, 1085, 2315 |
| Eco147I | AGGCCT | 2 cut(s) | 780, 1161 |
| Eco24I | GRGCYC | 1 cut(s) | 2806 |
| Eco32I | GATATC | 1 cut(s) | 2216 |
| Eco47I | GGWCC | 2 cut(s) | 928, 2257 |
| Eco57I | CTGAAG | 5 cut(s) | 1066, 1980, 2213, 2382, 2910 |
| Eco88I | CYCGRG | 1 cut(s) | 594 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2802 |
| EcoRII | CCWGG | 3 cut(s) | 1525, 2176, 2454 |
| EcoRV | GATATC | 1 cut(s) | 2216 |
| EcoT22I | ATGCAT | 4 cut(s) | 250, 1096, 1297, 1470 |
| EcoT38I | GRGCYC | 1 cut(s) | 2806 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1308, 1340 |
| FaqI | GGGAC | 1 cut(s) | 2158 |
| FauNDI | CATATG | 1 cut(s) | 1836 |
| FblI | GTMKAC | 1 cut(s) | 99 |
| Fnu4HI | GCNGC | 9 cut(s) | 198, 444, 459, 1227, 1831, 1900, 2278, 2764, 2767 |
| FokI | GGATG | 8 cut(s) | 235, 281, 650, 1477, 1771, 1904, 2442, 2905 |
| FriOI | GRGCYC | 1 cut(s) | 2806 |
| Fsp4HI | GCNGC | 9 cut(s) | 198, 444, 459, 1227, 1831, 1900, 2278, 2764, 2767 |
| FspBI | CTAG | 5 cut(s) | 782, 818, 902, 1184, 2046 |
| GlaI | GCGC | 2 cut(s) | 537, 2909 |
| GluI | GCNGC | 9 cut(s) | 198, 444, 459, 1227, 1831, 1900, 2278, 2764, 2767 |
| GsaI | CCCAGC | 1 cut(s) | 474 |
| GsuI | CTGGAG | 2 cut(s) | 969, 1734 |
| HaeIII | GGCC | 7 cut(s) | 322, 780, 1161, 1759, 2704, 2778, 2804 |
| HapII | CCGG | 2 cut(s) | 1932, 2775 |
| HhaI | GCGC | 2 cut(s) | 538, 2910 |
| Hin6I | GCGC | 2 cut(s) | 536, 2908 |
| HinP1I | GCGC | 2 cut(s) | 536, 2908 |
| HincII | GTYRAC | 1 cut(s) | 1014 |
| HindII | GTYRAC | 1 cut(s) | 1014 |
| HindIII | AAGCTT | 2 cut(s) | 1657, 2117 |
| HpaI | GTTAAC | 1 cut(s) | 1014 |
| HpaII | CCGG | 2 cut(s) | 1932, 2775 |
| HphI | GGTGA | 3 cut(s) | 86, 850, 1982 |
| Hpy188I | TCNGA | 7 cut(s) | 238, 349, 1035, 1633, 2105, 2362, 2929 |
| Hpy99I | CGWCG | 2 cut(s) | 1427, 2206 |
| HpyAV | CCTTC | 8 cut(s) | 36, 151, 722, 829, 1172, 1306, 2004, 2606 |
| HpyCH4III | ACNGT | 7 cut(s) | 316, 688, 1075, 1545, 1776, 1970, 2202 |
| HpyCH4IV | ACGT | 1 cut(s) | 1534 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 467, 1522, 2404, 2775 |
| HpyF3I | CTNAG | 8 cut(s) | 1401, 1521, 1679, 1945, 2034, 2072, 2219, 2720 |
| HpySE526I | ACGT | 1 cut(s) | 1534 |
| HspAI | GCGC | 2 cut(s) | 536, 2908 |
| Kpn2I | TCCGGA | 1 cut(s) | 1931 |
| KspAI | GTTAAC | 1 cut(s) | 1014 |
| Kzo9I | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| LmnI | GCTCC | 1 cut(s) | 2736 |
| Lsp1109I | GCAGC | 8 cut(s) | 209, 455, 470, 1213, 1842, 1886, 2289, 2775 |
| LweI | GCATC | 5 cut(s) | 130, 257, 1455, 1926, 2420 |
| MaeI | CTAG | 5 cut(s) | 782, 818, 902, 1184, 2046 |
| MaeII | ACGT | 1 cut(s) | 1534 |
| MalI | GATC | 4 cut(s) | 342, 1305, 1748, 2083 |
| MboI | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| MfeI | CAATTG | 2 cut(s) | 201, 2208 |
| MflI | RGATCY | 4 cut(s) | 340, 1303, 1746, 2081 |
| MhlI | GDGCHC | 1 cut(s) | 2806 |
| MlsI | TGGCCA | 1 cut(s) | 322 |
| MluNI | TGGCCA | 1 cut(s) | 322 |
| MlyI | GAGTC | 5 cut(s) | 218, 506, 1520, 2064, 2669 |
| MmeI | TCCRAC | 4 cut(s) | 416, 502, 1067, 1981 |
| Mox20I | TGGCCA | 1 cut(s) | 322 |
| Mph1103I | ATGCAT | 4 cut(s) | 250, 1096, 1297, 1470 |
| MroI | TCCGGA | 1 cut(s) | 1931 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1500, 2094 |
| MscI | TGGCCA | 1 cut(s) | 322 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1557, 2028 |
| Msp20I | TGGCCA | 1 cut(s) | 322 |
| MspA1I | CMGCKG | 2 cut(s) | 2622, 2766 |
| MspCI | CTTAAG | 2 cut(s) | 2026, 2120 |
| MspI | CCGG | 2 cut(s) | 1932, 2775 |
| MspR9I | CCNGG | 3 cut(s) | 1527, 2178, 2456 |
| MunI | CAATTG | 2 cut(s) | 201, 2208 |
| Mva1269I | GAATGC | 2 cut(s) | 1096, 1654 |
| MvaI | CCWGG | 3 cut(s) | 1527, 2178, 2456 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 467, 1522, 2404, 2775 |
| NdeI | CATATG | 1 cut(s) | 1836 |
| NdeII | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| NlaIV | GGNNCC | 6 cut(s) | 342, 1189, 1748, 2803, 2804, 2889 |
| NsiI | ATGCAT | 4 cut(s) | 250, 1096, 1297, 1470 |
| NspI | RCATGY | 1 cut(s) | 421 |
| NspV | TTCGAA | 1 cut(s) | 355 |
| OliI | CACNNNNGTG | 1 cut(s) | 2028 |
| PagI | TCATGA | 5 cut(s) | 394, 409, 511, 1552, 2629 |
| PceI | AGGCCT | 2 cut(s) | 780, 1161 |
| PctI | GAATGC | 2 cut(s) | 1096, 1654 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1500, 2094 |
| PflFI | GACNNNGTC | 1 cut(s) | 2659 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2897 |
| PkrI | GCNGC | 9 cut(s) | 199, 445, 460, 1228, 1832, 1901, 2279, 2765, 2768 |
| PleI | GAGTC | 5 cut(s) | 217, 505, 1519, 2064, 2668 |
| PpsI | GAGTC | 5 cut(s) | 217, 505, 1519, 2064, 2668 |
| PshBI | ATTAAT | 1 cut(s) | 1029 |
| PsiI | TTATAA | 5 cut(s) | 1062, 1290, 1691, 2264, 2792 |
| Psp6I | CCWGG | 3 cut(s) | 1525, 2176, 2454 |
| PspFI | CCCAGC | 1 cut(s) | 470 |
| PspGI | CCWGG | 3 cut(s) | 1525, 2176, 2454 |
| PspN4I | GGNNCC | 6 cut(s) | 342, 1189, 1748, 2803, 2804, 2889 |
| PspOMI | GGGCCC | 1 cut(s) | 2802 |
| PspPI | GGNCC | 4 cut(s) | 928, 2257, 2802, 2803 |
| PstI | CTGCAG | 1 cut(s) | 2765 |
| PsuI | RGATCY | 4 cut(s) | 340, 1303, 1746, 2081 |
| PsyI | GACNNNGTC | 1 cut(s) | 2659 |
| PvuII | CAGCTG | 1 cut(s) | 2622 |
| RsaI | GTAC | 4 cut(s) | 543, 1419, 1952, 2560 |
| RsaNI | GTAC | 4 cut(s) | 542, 1418, 1951, 2559 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1557, 2028 |
| SatI | GCNGC | 9 cut(s) | 198, 444, 459, 1227, 1831, 1900, 2278, 2764, 2767 |
| Sau3AI | GATC | 4 cut(s) | 340, 1303, 1746, 2081 |
| Sau96I | GGNCC | 4 cut(s) | 928, 2257, 2802, 2803 |
| ScaI | AGTACT | 2 cut(s) | 543, 1419 |
| SchI | GAGTC | 5 cut(s) | 218, 506, 1520, 2064, 2669 |
| ScrFI | CCNGG | 3 cut(s) | 1527, 2178, 2456 |
| SduI | GDGCHC | 1 cut(s) | 2806 |
| SfaNI | GCATC | 5 cut(s) | 130, 257, 1455, 1926, 2420 |
| SfcI | CTRYAG | 1 cut(s) | 2761 |
| SfuI | TTCGAA | 1 cut(s) | 355 |
| SinI | GGWCC | 2 cut(s) | 928, 2257 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1557, 2028 |
| SmlI | CTYRAG | 8 cut(s) | 1155, 1277, 2026, 2051, 2077, 2120, 2595, 2678 |
| SmoI | CTYRAG | 8 cut(s) | 1155, 1277, 2026, 2051, 2077, 2120, 2595, 2678 |
| SseBI | AGGCCT | 2 cut(s) | 780, 1161 |
| SsiI | CCGC | 5 cut(s) | 403, 1357, 2345, 2766, 2922 |
| SspI | AATATT | 1 cut(s) | 1459 |
| SspMI | CTAG | 5 cut(s) | 782, 818, 902, 1184, 2046 |
| StuI | AGGCCT | 2 cut(s) | 780, 1161 |
| StyD4I | CCNGG | 3 cut(s) | 1525, 2176, 2454 |
| TaaI | ACNGT | 7 cut(s) | 316, 688, 1075, 1545, 1776, 1970, 2202 |
| TaiI | ACGT | 1 cut(s) | 1537 |
| TaqI | TCGA | 4 cut(s) | 355, 1134, 1425, 2902 |
| TatI | WGTACW | 3 cut(s) | 541, 1417, 2558 |
| TauI | GCSGC | 1 cut(s) | 2769 |
| TscAI | CASTG | 4 cut(s) | 118, 2188, 2227, 2873 |
| TseI | GCWGC | 8 cut(s) | 197, 443, 458, 1226, 1830, 1899, 2277, 2763 |
| TspRI | CASTG | 4 cut(s) | 118, 2188, 2227, 2873 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2659 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2897 |
| Vha464I | CTTAAG | 2 cut(s) | 2026, 2120 |
| VpaK11BI | GGWCC | 2 cut(s) | 928, 2257 |
| VspI | ATTAAT | 1 cut(s) | 1029 |
| XapI | RAATTY | 7 cut(s) | 503, 1272, 1618, 1864, 1888, 1904, 2753 |
| XceI | RCATGY | 1 cut(s) | 421 |
| XmiI | GTMKAC | 1 cut(s) | 99 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1500, 2094 |
| XspI | CTAG | 5 cut(s) | 782, 818, 902, 1184, 2046 |
| ZrmI | AGTACT | 2 cut(s) | 543, 1419 |
| Zsp2I | ATGCAT | 4 cut(s) | 250, 1096, 1297, 1470 |