TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 124, 403 |
| AclWI | GGATC | 2 cut(s) | 143, 335 |
| AcsI | RAATTY | 1 cut(s) | 407 |
| AfaI | GTAC | 2 cut(s) | 432, 438 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 258 |
| AgeI | ACCGGT | 1 cut(s) | 322 |
| AgsI | TTSAA | 4 cut(s) | 14, 206, 222, 320 |
| AluBI | AGCT | 2 cut(s) | 119, 160 |
| AluI | AGCT | 2 cut(s) | 119, 160 |
| AlwI | GGATC | 2 cut(s) | 143, 335 |
| ApoI | RAATTY | 1 cut(s) | 407 |
| AseI | ATTAAT | 1 cut(s) | 458 |
| AsiGI | ACCGGT | 1 cut(s) | 322 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 28, 133 |
| BccI | CCATC | 1 cut(s) | 48 |
| BciVI | GTATCC | 1 cut(s) | 76 |
| BclI | TGATCA | 1 cut(s) | 154 |
| BfuI | GTATCC | 1 cut(s) | 76 |
| BisI | GCNGC | 2 cut(s) | 125, 403 |
| BlsI | GCNGC | 2 cut(s) | 126, 404 |
| BmsI | GCATC | 1 cut(s) | 257 |
| BsaBI | GATNNNNATC | 1 cut(s) | 221 |
| BsaJI | CCNNGG | 1 cut(s) | 345 |
| BsaWI | WCCGGW | 1 cut(s) | 322 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 258 |
| Bse118I | RCCGGY | 1 cut(s) | 322 |
| Bse1I | ACTGG | 1 cut(s) | 456 |
| Bse8I | GATNNNNATC | 1 cut(s) | 221 |
| BseDI | CCNNGG | 1 cut(s) | 345 |
| BseGI | GGATG | 4 cut(s) | 40, 157, 248, 274 |
| BseJI | GATNNNNATC | 1 cut(s) | 221 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 258 |
| BseMII | CTCAG | 2 cut(s) | 56, 175 |
| BseNI | ACTGG | 1 cut(s) | 456 |
| BseRI | GAGGAG | 1 cut(s) | 183 |
| BsgI | GTGCAG | 1 cut(s) | 133 |
| BshTI | ACCGGT | 1 cut(s) | 322 |
| BsiSI | CCGG | 1 cut(s) | 323 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 258 |
| BsmI | GAATGC | 1 cut(s) | 392 |
| Bsp143I | GATC | 3 cut(s) | 135, 154, 340 |
| BspACI | CCGC | 2 cut(s) | 124, 403 |
| BspCNI | CTCAG | 2 cut(s) | 57, 174 |
| BspPI | GGATC | 2 cut(s) | 143, 335 |
| BsrFI | RCCGGY | 1 cut(s) | 322 |
| BsrI | ACTGG | 1 cut(s) | 456 |
| BssAI | RCCGGY | 1 cut(s) | 322 |
| BssECI | CCNNGG | 1 cut(s) | 345 |
| BssMI | GATC | 3 cut(s) | 135, 154, 340 |
| BssT1I | CCWWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 1 cut(s) | 210 |
| Bst6I | CTCTTC | 1 cut(s) | 28 |
| BstDEI | CTNAG | 2 cut(s) | 65, 161 |
| BstF5I | GGATG | 4 cut(s) | 40, 157, 248, 274 |
| BstKTI | GATC | 3 cut(s) | 138, 157, 343 |
| BstMBI | GATC | 3 cut(s) | 135, 154, 340 |
| BsuI | GTATCC | 1 cut(s) | 76 |
| BtsCI | GGATG | 4 cut(s) | 40, 157, 248, 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 449 |
| Cfr10I | RCCGGY | 1 cut(s) | 322 |
| Csp6I | GTAC | 2 cut(s) | 431, 437 |
| CspAI | ACCGGT | 1 cut(s) | 322 |
| CviAII | CATG | 1 cut(s) | 148 |
| CviJI | RGCY | 3 cut(s) | 119, 160, 402 |
| CviKI_1 | RGCY | 3 cut(s) | 119, 160, 402 |
| CviQI | GTAC | 2 cut(s) | 431, 437 |
| DdeI | CTNAG | 2 cut(s) | 65, 161 |
| DpnI | GATC | 3 cut(s) | 137, 156, 342 |
| DpnII | GATC | 3 cut(s) | 135, 154, 340 |
| Eam1104I | CTCTTC | 1 cut(s) | 28 |
| EarI | CTCTTC | 1 cut(s) | 28 |
| Eco130I | CCWWGG | 1 cut(s) | 345 |
| EcoT14I | CCWWGG | 1 cut(s) | 345 |
| EcoT22I | ATGCAT | 1 cut(s) | 250 |
| ErhI | CCWWGG | 1 cut(s) | 345 |
| FaeI | CATG | 1 cut(s) | 151 |
| FaiI | YATR | 4 cut(s) | 149, 246, 353, 363 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 248, 280 |
| FatI | CATG | 1 cut(s) | 147 |
| FbaI | TGATCA | 1 cut(s) | 154 |
| Fnu4HI | GCNGC | 2 cut(s) | 125, 403 |
| FokI | GGATG | 4 cut(s) | 27, 164, 235, 281 |
| Fsp4HI | GCNGC | 2 cut(s) | 125, 403 |
| GluI | GCNGC | 2 cut(s) | 125, 403 |
| HapII | CCGG | 1 cut(s) | 323 |
| Hin1II | CATG | 1 cut(s) | 151 |
| HinfI | GANTC | 3 cut(s) | 17, 283, 422 |
| HpaII | CCGG | 1 cut(s) | 323 |
| HphI | GGTGA | 3 cut(s) | 16, 28, 133 |
| Hpy166II | GTNNAC | 1 cut(s) | 421 |
| Hpy188I | TCNGA | 4 cut(s) | 66, 74, 164, 398 |
| Hpy188III | TCNNGA | 4 cut(s) | 280, 287, 374, 474 |
| Hpy8I | GTNNAC | 1 cut(s) | 421 |
| HpyAV | CCTTC | 2 cut(s) | 124, 154 |
| HpyCH4III | ACNGT | 1 cut(s) | 210 |
| HpyCH4IV | ACGT | 1 cut(s) | 439 |
| HpyCH4V | TGCA | 3 cut(s) | 114, 248, 294 |
| HpyF3I | CTNAG | 2 cut(s) | 65, 161 |
| HpySE526I | ACGT | 1 cut(s) | 439 |
| Hsp92II | CATG | 1 cut(s) | 151 |
| Ksp22I | TGATCA | 1 cut(s) | 154 |
| Kzo9I | GATC | 3 cut(s) | 135, 154, 340 |
| LpnPI | CCDG | 4 cut(s) | 87, 336, 387, 437 |
| LweI | GCATC | 1 cut(s) | 257 |
| MaeII | ACGT | 1 cut(s) | 439 |
| MalI | GATC | 3 cut(s) | 137, 156, 342 |
| MboI | GATC | 3 cut(s) | 135, 154, 340 |
| MboII | GAAGA | 7 cut(s) | 15, 18, 21, 26, 185, 223, 395 |
| MfeI | CAATTG | 1 cut(s) | 201 |
| MluCI | AATT | 4 cut(s) | 94, 201, 407, 459 |
| MlyI | GAGTC | 2 cut(s) | 277, 416 |
| MnlI | CCTC | 6 cut(s) | 31, 68, 73, 161, 262, 359 |
| Mph1103I | ATGCAT | 1 cut(s) | 250 |
| MseI | TTAA | 1 cut(s) | 458 |
| MslI | CAYNNNNRTG | 1 cut(s) | 146 |
| MspI | CCGG | 1 cut(s) | 323 |
| MunI | CAATTG | 1 cut(s) | 201 |
| Mva1269I | GAATGC | 1 cut(s) | 392 |
| NdeII | GATC | 3 cut(s) | 135, 154, 340 |
| NlaIII | CATG | 1 cut(s) | 151 |
| NsiI | ATGCAT | 1 cut(s) | 250 |
| PctI | GAATGC | 1 cut(s) | 392 |
| PfeI | GAWTC | 1 cut(s) | 17 |
| PinAI | ACCGGT | 1 cut(s) | 322 |
| PkrI | GCNGC | 2 cut(s) | 126, 404 |
| PleI | GAGTC | 2 cut(s) | 277, 416 |
| PpsI | GAGTC | 2 cut(s) | 277, 416 |
| PshBI | ATTAAT | 1 cut(s) | 458 |
| RsaI | GTAC | 2 cut(s) | 432, 438 |
| RsaNI | GTAC | 2 cut(s) | 431, 437 |
| RseI | CAYNNNNRTG | 1 cut(s) | 146 |
| SaqAI | TTAA | 1 cut(s) | 458 |
| SatI | GCNGC | 2 cut(s) | 125, 403 |
| Sau3AI | GATC | 3 cut(s) | 135, 154, 340 |
| SchI | GAGTC | 2 cut(s) | 277, 416 |
| SetI | ASST | 7 cut(s) | 57, 106, 121, 146, 162, 370, 442 |
| SfaNI | GCATC | 1 cut(s) | 257 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 146 |
| Sse9I | AATT | 4 cut(s) | 94, 201, 407, 459 |
| SsiI | CCGC | 2 cut(s) | 124, 403 |
| SspI | AATATT | 1 cut(s) | 10 |
| StyI | CCWWGG | 1 cut(s) | 345 |
| TaaI | ACNGT | 1 cut(s) | 210 |
| TaiI | ACGT | 1 cut(s) | 442 |
| TaqI | TCGA | 3 cut(s) | 182, 288, 339 |
| TasI | AATT | 4 cut(s) | 94, 201, 407, 459 |
| TauI | GCSGC | 2 cut(s) | 127, 405 |
| TfiI | GAWTC | 1 cut(s) | 17 |
| Tru1I | TTAA | 1 cut(s) | 458 |
| Tru9I | TTAA | 1 cut(s) | 458 |
| TscAI | CASTG | 1 cut(s) | 456 |
| TspDTI | ATGAA | 2 cut(s) | 136, 285 |
| TspRI | CASTG | 1 cut(s) | 456 |
| VspI | ATTAAT | 1 cut(s) | 458 |
| XapI | RAATTY | 1 cut(s) | 407 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 262 |
| Zsp2I | ATGCAT | 1 cut(s) | 250 |