TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 684 |
| Acc16I | TGCGCA | 1 cut(s) | 2118 |
| Acc36I | ACCTGC | 1 cut(s) | 1378 |
| Acc65I | GGTACC | 1 cut(s) | 1628 |
| AccB1I | GGYRCC | 3 cut(s) | 1628, 2703, 3582 |
| AccI | GTMKAC | 1 cut(s) | 4755 |
| AccII | CGCG | 2 cut(s) | 3233, 3855 |
| AciI | CCGC | 6 cut(s) | 102, 434, 1363, 2651, 3530, 4359 |
| AcoI | YGGCCR | 1 cut(s) | 546 |
| AcuI | CTGAAG | 3 cut(s) | 1074, 1620, 4319 |
| AcvI | CACGTG | 1 cut(s) | 1610 |
| AdeI | CACNNNGTG | 2 cut(s) | 2659, 3538 |
| AfaI | GTAC | 9 cut(s) | 863, 1016, 1630, 2632, 2663, 3511, 3542, 3796, 4473 |
| AfeI | AGCGCT | 3 cut(s) | 174, 2740, 3619 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 243, 1094, 2713, 3320, 3592 |
| AflII | CTTAAG | 2 cut(s) | 2272, 2875 |
| AflIII | ACRYGT | 6 cut(s) | 1609, 2355, 2958, 3231, 4474, 4487 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 3781, 4093 |
| AjiI | CACGTC | 2 cut(s) | 3351, 4488 |
| AjnI | CCWGG | 2 cut(s) | 3936, 4243 |
| AleI | CACNNNNGTG | 1 cut(s) | 4235 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 603, 635 |
| Alw21I | GWGCWC | 1 cut(s) | 1395 |
| Alw26I | GTCTC | 8 cut(s) | 1900, 2024, 2336, 2711, 2939, 3590, 3891, 3990 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3755 |
| Ama87I | CYCGRG | 2 cut(s) | 272, 2096 |
| Aor51HI | AGCGCT | 3 cut(s) | 174, 2740, 3619 |
| AoxI | GGCC | 6 cut(s) | 88, 546, 754, 1330, 1404, 1733 |
| ApeKI | GCWGC | 8 cut(s) | 419, 1591, 1594, 2671, 3550, 4709, 4712, 4715 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1290, 2766, 3645 |
| Asp718I | GGTACC | 1 cut(s) | 1628 |
| AspA2I | CCTAGG | 2 cut(s) | 1802, 4289 |
| AspLEI | GCGC | 4 cut(s) | 175, 2119, 2741, 3620 |
| AspS9I | GGNCC | 3 cut(s) | 403, 1405, 4591 |
| AsuC2I | CCSGG | 2 cut(s) | 4005, 4187 |
| AsuNHI | GCTAGC | 1 cut(s) | 4676 |
| AvaI | CYCGRG | 2 cut(s) | 272, 2096 |
| AvaII | GGWCC | 2 cut(s) | 403, 4591 |
| AvrII | CCTAGG | 2 cut(s) | 1802, 4289 |
| BaeGI | GKGCMC | 2 cut(s) | 2708, 3587 |
| BalI | TGGCCA | 1 cut(s) | 548 |
| BamHI | GGATCC | 1 cut(s) | 4519 |
| BanI | GGYRCC | 3 cut(s) | 1628, 2703, 3582 |
| BauI | CACGAG | 2 cut(s) | 573, 4650 |
| BbrPI | CACGTG | 1 cut(s) | 1610 |
| BbsI | GAAGAC | 5 cut(s) | 1133, 3183, 4307, 4740, 4830 |
| Bbv12I | GWGCWC | 1 cut(s) | 1395 |
| BbvI | GCAGC | 8 cut(s) | 431, 1581, 1603, 2658, 3537, 4699, 4721, 4727 |
| BciT130I | CCWGG | 2 cut(s) | 3938, 4245 |
| BciVI | GTATCC | 3 cut(s) | 61, 1826, 2820 |
| BclI | TGATCA | 6 cut(s) | 6, 139, 2809, 4465, 4624, 4762 |
| BcnI | CCSGG | 2 cut(s) | 4005, 4187 |
| BcoDI | GTCTC | 8 cut(s) | 1900, 2024, 2336, 2711, 2939, 3590, 3891, 3990 |
| BfmI | CTRYAG | 2 cut(s) | 3716, 4713 |
| BfoI | RGCGCY | 3 cut(s) | 176, 2742, 3621 |
| BfrI | CTTAAG | 2 cut(s) | 2272, 2875 |
| BfuAI | ACCTGC | 1 cut(s) | 1378 |
| BfuI | GTATCC | 3 cut(s) | 61, 1826, 2820 |
| BglII | AGATCT | 2 cut(s) | 2464, 3067 |
| BlnI | CCTAGG | 2 cut(s) | 1802, 4289 |
| BmcAI | AGTACT | 1 cut(s) | 3796 |
| Bme1390I | CCNGG | 4 cut(s) | 3938, 4005, 4187, 4245 |
| Bme18I | GGWCC | 2 cut(s) | 403, 4591 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 3781, 4093 |
| BmeT110I | CYCGRG | 2 cut(s) | 272, 2096 |
| BmgBI | CACGTC | 2 cut(s) | 3351, 4488 |
| BmgT120I | GGNCC | 3 cut(s) | 403, 1405, 4591 |
| BmiI | GGNNCC | 6 cut(s) | 1630, 2705, 3584, 4521, 4592, 4797 |
| BmrFI | CCNGG | 4 cut(s) | 3938, 4005, 4187, 4245 |
| BmtI | GCTAGC | 1 cut(s) | 4680 |
| BpiI | GAAGAC | 5 cut(s) | 1133, 3183, 4307, 4740, 4830 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1230, 1262, 3985, 4017 |
| BpmI | CTGGAG | 3 cut(s) | 1710, 2735, 3614 |
| BpuEI | CTTGAG | 4 cut(s) | 1738, 2048, 2395, 2998 |
| BpuMI | CCSGG | 2 cut(s) | 4005, 4187 |
| BsaAI | YACGTR | 1 cut(s) | 1610 |
| BsaBI | GATNNNNATC | 6 cut(s) | 119, 206, 2449, 3052, 4623, 4764 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 744, 774 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 243, 1094, 2713, 3320, 3592 |
| Bse118I | RCCGGY | 2 cut(s) | 923, 4136 |
| Bse1I | ACTGG | 6 cut(s) | 308, 480, 2718, 3597, 3990, 4574 |
| Bse3DI | GCAATG | 4 cut(s) | 1186, 1299, 2112, 4863 |
| Bse8I | GATNNNNATC | 6 cut(s) | 119, 206, 2449, 3052, 4623, 4764 |
| BseBI | CCWGG | 2 cut(s) | 3938, 4245 |
| BseJI | GATNNNNATC | 6 cut(s) | 119, 206, 2449, 3052, 4623, 4764 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 243, 1094, 2713, 3320, 3592 |
| BseMI | GCAATG | 4 cut(s) | 1186, 1299, 2112, 4863 |
| BseMII | CTCAG | 8 cut(s) | 41, 160, 474, 980, 1911, 4296, 4589, 4862 |
| BseNI | ACTGG | 6 cut(s) | 308, 480, 2718, 3597, 3990, 4574 |
| BseRI | GAGGAG | 1 cut(s) | 168 |
| BseSI | GKGCMC | 2 cut(s) | 2708, 3587 |
| BseXI | GCAGC | 8 cut(s) | 431, 1581, 1603, 2658, 3537, 4699, 4721, 4727 |
| BseYI | CCCAGC | 1 cut(s) | 3711 |
| BsgI | GTGCAG | 4 cut(s) | 298, 1610, 2778, 3657 |
| Bsh1236I | CGCG | 2 cut(s) | 3233, 3855 |
| BshFI | GGCC | 6 cut(s) | 90, 548, 756, 1332, 1406, 1735 |
| BshNI | GGYRCC | 3 cut(s) | 1628, 2703, 3582 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1395 |
| BsiHKCI | CYCGRG | 2 cut(s) | 272, 2096 |
| BsiSI | CCGG | 5 cut(s) | 924, 3833, 4004, 4137, 4187 |
| BslFI | GGGAC | 2 cut(s) | 4020, 4271 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 243, 1094, 2713, 3320, 3592 |
| BsmAI | GTCTC | 8 cut(s) | 1900, 2024, 2336, 2711, 2939, 3590, 3891, 3990 |
| BsmFI | GGGAC | 2 cut(s) | 4020, 4271 |
| BsmI | GAATGC | 1 cut(s) | 1072 |
| BsnI | GGCC | 6 cut(s) | 90, 548, 756, 1332, 1406, 1735 |
| BsoBI | CYCGRG | 2 cut(s) | 272, 2096 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1395, 2708, 3587 |
| Bsp1407I | TGTACA | 3 cut(s) | 2630, 3509, 4471 |
| Bsp19I | CCATGG | 2 cut(s) | 29, 1422 |
| Bsp68I | TCGCGA | 1 cut(s) | 3855 |
| BspACI | CCGC | 6 cut(s) | 102, 434, 1363, 2651, 3530, 4359 |
| BspANI | GGCC | 6 cut(s) | 90, 548, 756, 1332, 1406, 1735 |
| BspCNI | CTCAG | 8 cut(s) | 42, 159, 473, 981, 1910, 4297, 4590, 4863 |
| BspFNI | CGCG | 2 cut(s) | 3233, 3855 |
| BspHI | TCATGA | 5 cut(s) | 1036, 1525, 4249, 4462, 4768 |
| BspLI | GGNNCC | 6 cut(s) | 1630, 2705, 3584, 4521, 4592, 4797 |
| BspMAI | CTGCAG | 1 cut(s) | 4717 |
| BspMI | ACCTGC | 1 cut(s) | 1378 |
| BspOI | GCTAGC | 1 cut(s) | 4680 |
| BspT107I | GGYRCC | 3 cut(s) | 1628, 2703, 3582 |
| BspTI | CTTAAG | 2 cut(s) | 2272, 2875 |
| BsrDI | GCAATG | 4 cut(s) | 1186, 1299, 2112, 4863 |
| BsrFI | RCCGGY | 2 cut(s) | 923, 4136 |
| BsrGI | TGTACA | 3 cut(s) | 2630, 3509, 4471 |
| BsrI | ACTGG | 6 cut(s) | 308, 480, 2718, 3597, 3990, 4574 |
| BssAI | RCCGGY | 2 cut(s) | 923, 4136 |
| BssSI | CACGAG | 2 cut(s) | 573, 4650 |
| Bst2BI | CACGAG | 2 cut(s) | 573, 4650 |
| Bst2UI | CCWGG | 2 cut(s) | 3938, 4245 |
| Bst6I | CTCTTC | 4 cut(s) | 186, 498, 2772, 3651 |
| BstAFI | CTTAAG | 2 cut(s) | 2272, 2875 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1447 |
| BstAUI | TGTACA | 3 cut(s) | 2630, 3509, 4471 |
| BstBAI | YACGTR | 1 cut(s) | 1610 |
| BstC8I | GCNNGC | 5 cut(s) | 2842, 3838, 4134, 4138, 4678 |
| BstDSI | CCRYGG | 2 cut(s) | 29, 1422 |
| BstEII | GGTNACC | 1 cut(s) | 814 |
| BstFNI | CGCG | 2 cut(s) | 3233, 3855 |
| BstH2I | RGCGCY | 3 cut(s) | 176, 2742, 3621 |
| BstHHI | GCGC | 4 cut(s) | 175, 2119, 2741, 3620 |
| BstMAI | GTCTC | 8 cut(s) | 1900, 2024, 2336, 2711, 2939, 3590, 3891, 3990 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 96, 1447, 3852, 4677, 4706, 4715, 4746, 4862 |
| BstNI | CCWGG | 2 cut(s) | 3938, 4245 |
| BstNSI | RCATGY | 9 cut(s) | 1308, 1648, 2359, 2844, 2962, 3840, 4136, 4154, 4478 |
| BstPI | GGTNACC | 1 cut(s) | 814 |
| BstSCI | CCNGG | 4 cut(s) | 3936, 4003, 4185, 4243 |
| BstSFI | CTRYAG | 2 cut(s) | 3716, 4713 |
| BstSLI | GKGCMC | 2 cut(s) | 2708, 3587 |
| BstUI | CGCG | 2 cut(s) | 3233, 3855 |
| BstV1I | GCAGC | 8 cut(s) | 431, 1581, 1603, 2658, 3537, 4699, 4721, 4727 |
| BstV2I | GAAGAC | 5 cut(s) | 1133, 3183, 4307, 4740, 4830 |
| BstX2I | RGATCY | 9 cut(s) | 267, 585, 1933, 2068, 2464, 3067, 3343, 4373, 4519 |
| BstYI | RGATCY | 9 cut(s) | 267, 585, 1933, 2068, 2464, 3067, 3343, 4373, 4519 |
| BsuI | GTATCC | 3 cut(s) | 61, 1826, 2820 |
| BsuRI | GGCC | 6 cut(s) | 90, 548, 756, 1332, 1406, 1735 |
| BtgI | CCRYGG | 2 cut(s) | 29, 1422 |
| BtrI | CACGTC | 2 cut(s) | 3351, 4488 |
| BtsI | GCAGTG | 1 cut(s) | 4678 |
| BtsIMutI | CAGTG | 6 cut(s) | 487, 754, 1275, 2662, 3541, 4678 |
| BtuMI | TCGCGA | 1 cut(s) | 3855 |
| BveI | ACCTGC | 1 cut(s) | 1378 |
| Cac8I | GCNNGC | 5 cut(s) | 2842, 3838, 4134, 4138, 4678 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3755 |
| CciI | TCATGA | 5 cut(s) | 1036, 1525, 4249, 4462, 4768 |
| CfoI | GCGC | 4 cut(s) | 175, 2119, 2741, 3620 |
| Cfr10I | RCCGGY | 2 cut(s) | 923, 4136 |
| Cfr13I | GGNCC | 3 cut(s) | 403, 1405, 4591 |
| CseI | GACGC | 6 cut(s) | 98, 1689, 2567, 3222, 3446, 4469 |
| Csp6I | GTAC | 9 cut(s) | 862, 1015, 1629, 2631, 2662, 3510, 3541, 3795, 4472 |
| CviQI | GTAC | 9 cut(s) | 862, 1015, 1629, 2631, 2662, 3510, 3541, 3795, 4472 |
| DraI | TTTAAA | 1 cut(s) | 1075 |
| DraIII | CACNNNGTG | 2 cut(s) | 2659, 3538 |
| DriI | GACNNNNNGTC | 2 cut(s) | 3781, 4093 |
| EaeI | YGGCCR | 1 cut(s) | 546 |
| Eam1104I | CTCTTC | 4 cut(s) | 186, 498, 2772, 3651 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 3781, 4093 |
| EarI | CTCTTC | 4 cut(s) | 186, 498, 2772, 3651 |
| Eco147I | AGGCCT | 1 cut(s) | 756 |
| Eco47I | GGWCC | 2 cut(s) | 403, 4591 |
| Eco47III | AGCGCT | 3 cut(s) | 174, 2740, 3619 |
| Eco57I | CTGAAG | 3 cut(s) | 1074, 1620, 4319 |
| Eco72I | CACGTG | 1 cut(s) | 1610 |
| Eco88I | CYCGRG | 2 cut(s) | 272, 2096 |
| Eco91I | GGTNACC | 1 cut(s) | 814 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1405 |
| EcoO65I | GGTNACC | 1 cut(s) | 814 |
| EcoRII | CCWGG | 2 cut(s) | 3936, 4243 |
| EcoT22I | ATGCAT | 3 cut(s) | 235, 1443, 3842 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 233, 265, 762, 794 |
| FaqI | GGGAC | 2 cut(s) | 4020, 4271 |
| FauNDI | CATATG | 2 cut(s) | 289, 624 |
| FbaI | TGATCA | 6 cut(s) | 6, 139, 2809, 4465, 4624, 4762 |
| FblI | GTMKAC | 1 cut(s) | 4755 |
| FspI | TGCGCA | 1 cut(s) | 2118 |
| GlaI | GCGC | 4 cut(s) | 174, 2118, 2740, 3619 |
| GsaI | CCCAGC | 1 cut(s) | 3715 |
| GsuI | CTGGAG | 3 cut(s) | 1710, 2735, 3614 |
| HaeII | RGCGCY | 3 cut(s) | 176, 2742, 3621 |
| HaeIII | GGCC | 6 cut(s) | 90, 548, 756, 1332, 1406, 1735 |
| HapII | CCGG | 5 cut(s) | 924, 3833, 4004, 4137, 4187 |
| HgaI | GACGC | 6 cut(s) | 98, 1689, 2567, 3222, 3446, 4469 |
| HhaI | GCGC | 4 cut(s) | 175, 2119, 2741, 3620 |
| Hin6I | GCGC | 4 cut(s) | 173, 2117, 2739, 3618 |
| HinP1I | GCGC | 4 cut(s) | 173, 2117, 2739, 3618 |
| HindIII | AAGCTT | 3 cut(s) | 593, 1353, 1870 |
| HpaII | CCGG | 5 cut(s) | 924, 3833, 4004, 4137, 4187 |
| Hpy99I | CGWCG | 1 cut(s) | 1265 |
| HpyCH4IV | ACGT | 4 cut(s) | 1117, 1609, 3350, 4487 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 96, 1447, 3852, 4677, 4706, 4715, 4746, 4862 |
| HpySE526I | ACGT | 4 cut(s) | 1117, 1609, 3350, 4487 |
| HspAI | GCGC | 4 cut(s) | 173, 2117, 2739, 3618 |
| KpnI | GGTACC | 1 cut(s) | 1632 |
| KroI | GCCGGC | 1 cut(s) | 4136 |
| KroNI | GCCGGC | 1 cut(s) | 4138 |
| Ksp22I | TGATCA | 6 cut(s) | 6, 139, 2809, 4465, 4624, 4762 |
| LmnI | GCTCC | 3 cut(s) | 2284, 2887, 4504 |
| Lsp1109I | GCAGC | 8 cut(s) | 431, 1581, 1603, 2658, 3537, 4699, 4721, 4727 |
| MaeII | ACGT | 4 cut(s) | 1117, 1609, 3350, 4487 |
| MaeIII | GTNAC | 5 cut(s) | 814, 1256, 1427, 1742, 4381 |
| MflI | RGATCY | 9 cut(s) | 267, 585, 1933, 2068, 2464, 3067, 3343, 4373, 4519 |
| MhlI | GDGCHC | 3 cut(s) | 1395, 2708, 3587 |
| MlsI | TGGCCA | 1 cut(s) | 548 |
| MluI | ACGCGT | 1 cut(s) | 3231 |
| MluNI | TGGCCA | 1 cut(s) | 548 |
| MlyI | GAGTC | 7 cut(s) | 203, 448, 1816, 2014, 2138, 3791, 4460 |
| MmeI | TCCRAC | 4 cut(s) | 519, 2063, 3936, 4832 |
| Mox20I | TGGCCA | 1 cut(s) | 548 |
| Mph1103I | ATGCAT | 3 cut(s) | 235, 1443, 3842 |
| MroNI | GCCGGC | 1 cut(s) | 4136 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1290, 2766, 3645 |
| MscI | TGGCCA | 1 cut(s) | 548 |
| Msp20I | TGGCCA | 1 cut(s) | 548 |
| MspA1I | CMGCKG | 4 cut(s) | 1594, 4126, 4361, 4712 |
| MspCI | CTTAAG | 2 cut(s) | 2272, 2875 |
| MspI | CCGG | 5 cut(s) | 924, 3833, 4004, 4137, 4187 |
| MspR9I | CCNGG | 4 cut(s) | 3938, 4005, 4187, 4245 |
| Mva1269I | GAATGC | 1 cut(s) | 1072 |
| MvaI | CCWGG | 2 cut(s) | 3938, 4245 |
| MvnI | CGCG | 2 cut(s) | 3233, 3855 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 96, 1447, 3852, 4677, 4706, 4715, 4746, 4862 |
| NaeI | GCCGGC | 1 cut(s) | 4138 |
| NciI | CCSGG | 2 cut(s) | 4005, 4187 |
| NcoI | CCATGG | 2 cut(s) | 29, 1422 |
| NdeI | CATATG | 2 cut(s) | 289, 624 |
| NgoMIV | GCCGGC | 1 cut(s) | 4136 |
| NheI | GCTAGC | 1 cut(s) | 4676 |
| NlaIV | GGNNCC | 6 cut(s) | 1630, 2705, 3584, 4521, 4592, 4797 |
| NmuCI | GTSAC | 4 cut(s) | 814, 1427, 1742, 4381 |
| NruI | TCGCGA | 1 cut(s) | 3855 |
| NsbI | TGCGCA | 1 cut(s) | 2118 |
| NsiI | ATGCAT | 3 cut(s) | 235, 1443, 3842 |
| NspI | RCATGY | 9 cut(s) | 1308, 1648, 2359, 2844, 2962, 3840, 4136, 4154, 4478 |
| OliI | CACNNNNGTG | 1 cut(s) | 4235 |
| PaeI | GCATGC | 3 cut(s) | 2844, 3840, 4136 |
| PaeR7I | CTCGAG | 2 cut(s) | 272, 2096 |
| PagI | TCATGA | 5 cut(s) | 1036, 1525, 4249, 4462, 4768 |
| PceI | AGGCCT | 1 cut(s) | 756 |
| PciI | ACATGT | 3 cut(s) | 2355, 2958, 4474 |
| PctI | GAATGC | 1 cut(s) | 1072 |
| PdiI | GCCGGC | 1 cut(s) | 4138 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1290, 2766, 3645 |
| PflFI | GACNNNGTC | 1 cut(s) | 4450 |
| PfoI | TCCNGGA | 2 cut(s) | 4003, 4185 |
| PleI | GAGTC | 7 cut(s) | 202, 448, 1815, 2013, 2137, 3790, 4459 |
| PmaCI | CACGTG | 1 cut(s) | 1610 |
| PmlI | CACGTG | 1 cut(s) | 1610 |
| PpsI | GAGTC | 7 cut(s) | 202, 448, 1815, 2013, 2137, 3790, 4459 |
| Ppu21I | YACGTR | 1 cut(s) | 1610 |
| PscI | ACATGT | 3 cut(s) | 2355, 2958, 4474 |
| PsiI | TTATAA | 1 cut(s) | 684 |
| Psp6I | CCWGG | 2 cut(s) | 3936, 4243 |
| PspCI | CACGTG | 1 cut(s) | 1610 |
| PspEI | GGTNACC | 1 cut(s) | 814 |
| PspFI | CCCAGC | 1 cut(s) | 3711 |
| PspGI | CCWGG | 2 cut(s) | 3936, 4243 |
| PspN4I | GGNNCC | 6 cut(s) | 1630, 2705, 3584, 4521, 4592, 4797 |
| PspPI | GGNCC | 3 cut(s) | 403, 1405, 4591 |
| PspXI | VCTCGAGB | 1 cut(s) | 272 |
| PstI | CTGCAG | 1 cut(s) | 4717 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3755 |
| PsuI | RGATCY | 9 cut(s) | 267, 585, 1933, 2068, 2464, 3067, 3343, 4373, 4519 |
| PsyI | GACNNNGTC | 1 cut(s) | 4450 |
| PvuII | CAGCTG | 3 cut(s) | 1594, 4126, 4712 |
| RruI | TCGCGA | 1 cut(s) | 3855 |
| RsaI | GTAC | 9 cut(s) | 863, 1016, 1630, 2632, 2663, 3511, 3542, 3796, 4473 |
| RsaNI | GTAC | 9 cut(s) | 862, 1015, 1629, 2631, 2662, 3510, 3541, 3795, 4472 |
| Sau96I | GGNCC | 3 cut(s) | 403, 1405, 4591 |
| ScaI | AGTACT | 1 cut(s) | 3796 |
| SchI | GAGTC | 7 cut(s) | 203, 448, 1816, 2014, 2138, 3791, 4460 |
| ScrFI | CCNGG | 4 cut(s) | 3938, 4005, 4187, 4245 |
| SduI | GDGCHC | 3 cut(s) | 1395, 2708, 3587 |
| SfcI | CTRYAG | 2 cut(s) | 3716, 4713 |
| Sfr274I | CTCGAG | 2 cut(s) | 272, 2096 |
| SinI | GGWCC | 2 cut(s) | 403, 4591 |
| SlaI | CTCGAG | 2 cut(s) | 272, 2096 |
| SmlI | CTYRAG | 8 cut(s) | 272, 1717, 2027, 2096, 2272, 2410, 2875, 3013 |
| SmoI | CTYRAG | 8 cut(s) | 272, 1717, 2027, 2096, 2272, 2410, 2875, 3013 |
| SphI | GCATGC | 3 cut(s) | 2844, 3840, 4136 |
| SseBI | AGGCCT | 1 cut(s) | 756 |
| SsiI | CCGC | 6 cut(s) | 102, 434, 1363, 2651, 3530, 4359 |
| SspI | AATATT | 1 cut(s) | 1798 |
| StuI | AGGCCT | 1 cut(s) | 756 |
| StyD4I | CCNGG | 4 cut(s) | 3936, 4003, 4185, 4243 |
| TaiI | ACGT | 4 cut(s) | 1120, 1612, 3353, 4490 |
| TatI | WGTACW | 5 cut(s) | 861, 2630, 3509, 3794, 4471 |
| TauI | GCSGC | 3 cut(s) | 437, 2653, 3532 |
| TscAI | CASTG | 6 cut(s) | 487, 754, 1282, 2662, 3541, 4678 |
| TseFI | GTSAC | 4 cut(s) | 814, 1427, 1742, 4381 |
| TseI | GCWGC | 8 cut(s) | 419, 1591, 1594, 2671, 3550, 4709, 4712, 4715 |
| Tsp45I | GTSAC | 4 cut(s) | 814, 1427, 1742, 4381 |
| TspGWI | ACGGA | 3 cut(s) | 2081, 2679, 3558 |
| TspRI | CASTG | 6 cut(s) | 487, 754, 1282, 2662, 3541, 4678 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4450 |
| Vha464I | CTTAAG | 2 cut(s) | 2272, 2875 |
| VpaK11BI | GGWCC | 2 cut(s) | 403, 4591 |
| XbaI | TCTAGA | 5 cut(s) | 1048, 2680, 2689, 3559, 3568 |
| XceI | RCATGY | 9 cut(s) | 1308, 1648, 2359, 2844, 2962, 3840, 4136, 4154, 4478 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 247 |
| XhoI | CTCGAG | 2 cut(s) | 272, 2096 |
| XmaJI | CCTAGG | 2 cut(s) | 1802, 4289 |
| XmiI | GTMKAC | 1 cut(s) | 4755 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1290, 2766, 3645 |
| ZrmI | AGTACT | 1 cut(s) | 3796 |
| Zsp2I | ATGCAT | 3 cut(s) | 235, 1443, 3842 |