DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 106 |
| AclWI | GGATC | 2 cut(s) | 125, 317 |
| AcsI | RAATTY | 1 cut(s) | 386 |
| AfeI | AGCGCT | 1 cut(s) | 171 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 240 |
| AgsI | TTSAA | 5 cut(s) | 14, 188, 204, 302, 391 |
| AluBI | AGCT | 1 cut(s) | 101 |
| AluI | AGCT | 1 cut(s) | 101 |
| AlwI | GGATC | 2 cut(s) | 125, 317 |
| Aor51HI | AGCGCT | 1 cut(s) | 171 |
| ApoI | RAATTY | 1 cut(s) | 386 |
| AspLEI | GCGC | 1 cut(s) | 172 |
| AsuHPI | GGTGA | 4 cut(s) | 16, 25, 74, 115 |
| BccI | CCATC | 1 cut(s) | 45 |
| BclI | TGATCA | 1 cut(s) | 136 |
| BfaI | CTAG | 1 cut(s) | 412 |
| BfoI | RGCGCY | 1 cut(s) | 173 |
| BglII | AGATCT | 1 cut(s) | 264 |
| BisI | GCNGC | 1 cut(s) | 107 |
| BlsI | GCNGC | 1 cut(s) | 108 |
| BsaBI | GATNNNNATC | 1 cut(s) | 203 |
| BsaJI | CCNNGG | 1 cut(s) | 327 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 240 |
| Bse8I | GATNNNNATC | 1 cut(s) | 203 |
| BseDI | CCNNGG | 1 cut(s) | 327 |
| BseGI | GGATG | 3 cut(s) | 37, 139, 256 |
| BseJI | GATNNNNATC | 1 cut(s) | 203 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 240 |
| BseMII | CTCAG | 2 cut(s) | 41, 157 |
| BseRI | GAGGAG | 1 cut(s) | 165 |
| BsgI | GTGCAG | 1 cut(s) | 115 |
| BslFI | GGGAC | 1 cut(s) | 378 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 240 |
| BsmFI | GGGAC | 1 cut(s) | 378 |
| BsmI | GAATGC | 1 cut(s) | 386 |
| Bsp143I | GATC | 4 cut(s) | 117, 136, 264, 322 |
| BspACI | CCGC | 1 cut(s) | 106 |
| BspCNI | CTCAG | 2 cut(s) | 42, 156 |
| BspPI | GGATC | 2 cut(s) | 125, 317 |
| BssECI | CCNNGG | 1 cut(s) | 327 |
| BssMI | GATC | 4 cut(s) | 117, 136, 264, 322 |
| BssT1I | CCWWGG | 1 cut(s) | 327 |
| Bst4CI | ACNGT | 1 cut(s) | 192 |
| BstDEI | CTNAG | 2 cut(s) | 50, 143 |
| BstF5I | GGATG | 3 cut(s) | 37, 139, 256 |
| BstH2I | RGCGCY | 1 cut(s) | 173 |
| BstHHI | GCGC | 1 cut(s) | 172 |
| BstKTI | GATC | 4 cut(s) | 120, 139, 267, 325 |
| BstMBI | GATC | 4 cut(s) | 117, 136, 264, 322 |
| BstX2I | RGATCY | 1 cut(s) | 264 |
| BstYI | RGATCY | 1 cut(s) | 264 |
| BtsCI | GGATG | 3 cut(s) | 37, 139, 256 |
| CfoI | GCGC | 1 cut(s) | 172 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 1 cut(s) | 101 |
| CviKI_1 | RGCY | 1 cut(s) | 101 |
| DdeI | CTNAG | 2 cut(s) | 50, 143 |
| DpnI | GATC | 4 cut(s) | 119, 138, 266, 324 |
| DpnII | GATC | 4 cut(s) | 117, 136, 264, 322 |
| Eco130I | CCWWGG | 1 cut(s) | 327 |
| Eco47III | AGCGCT | 1 cut(s) | 171 |
| EcoT14I | CCWWGG | 1 cut(s) | 327 |
| ErhI | CCWWGG | 1 cut(s) | 327 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 5 cut(s) | 131, 228, 335, 345, 347 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 230, 262 |
| FaqI | GGGAC | 1 cut(s) | 378 |
| FatI | CATG | 1 cut(s) | 129 |
| FbaI | TGATCA | 1 cut(s) | 136 |
| Fnu4HI | GCNGC | 1 cut(s) | 107 |
| FokI | GGATG | 3 cut(s) | 24, 146, 263 |
| Fsp4HI | GCNGC | 1 cut(s) | 107 |
| FspBI | CTAG | 1 cut(s) | 412 |
| GlaI | GCGC | 1 cut(s) | 171 |
| GluI | GCNGC | 1 cut(s) | 107 |
| HaeII | RGCGCY | 1 cut(s) | 173 |
| HhaI | GCGC | 1 cut(s) | 172 |
| Hin1II | CATG | 1 cut(s) | 133 |
| Hin6I | GCGC | 1 cut(s) | 170 |
| HinP1I | GCGC | 1 cut(s) | 170 |
| HinfI | GANTC | 2 cut(s) | 17, 230 |
| HphI | GGTGA | 4 cut(s) | 16, 25, 74, 115 |
| Hpy188I | TCNGA | 4 cut(s) | 51, 59, 146, 220 |
| Hpy188III | TCNNGA | 2 cut(s) | 262, 377 |
| HpyAV | CCTTC | 2 cut(s) | 106, 136 |
| HpyCH4III | ACNGT | 1 cut(s) | 192 |
| HpyCH4V | TGCA | 3 cut(s) | 96, 276, 384 |
| HpyF3I | CTNAG | 2 cut(s) | 50, 143 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| HspAI | GCGC | 1 cut(s) | 170 |
| Ksp22I | TGATCA | 1 cut(s) | 136 |
| Kzo9I | GATC | 4 cut(s) | 117, 136, 264, 322 |
| LpnPI | CCDG | 3 cut(s) | 69, 290, 362 |
| MaeI | CTAG | 1 cut(s) | 412 |
| MalI | GATC | 4 cut(s) | 119, 138, 266, 324 |
| MboI | GATC | 4 cut(s) | 117, 136, 264, 322 |
| MboII | GAAGA | 4 cut(s) | 26, 167, 205, 259 |
| MflI | RGATCY | 1 cut(s) | 264 |
| MluCI | AATT | 3 cut(s) | 42, 183, 386 |
| MnlI | CCTC | 6 cut(s) | 31, 53, 143, 189, 244, 355 |
| MseI | TTAA | 1 cut(s) | 164 |
| MslI | CAYNNNNRTG | 1 cut(s) | 128 |
| Mva1269I | GAATGC | 1 cut(s) | 386 |
| NdeII | GATC | 4 cut(s) | 117, 136, 264, 322 |
| NlaIII | CATG | 1 cut(s) | 133 |
| PctI | GAATGC | 1 cut(s) | 386 |
| PfeI | GAWTC | 2 cut(s) | 17, 230 |
| PkrI | GCNGC | 1 cut(s) | 108 |
| PsuI | RGATCY | 1 cut(s) | 264 |
| RseI | CAYNNNNRTG | 1 cut(s) | 128 |
| SaqAI | TTAA | 1 cut(s) | 164 |
| SatI | GCNGC | 1 cut(s) | 107 |
| Sau3AI | GATC | 4 cut(s) | 117, 136, 264, 322 |
| SetI | ASST | 7 cut(s) | 64, 88, 103, 128, 309, 352, 411 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 128 |
| Sse9I | AATT | 3 cut(s) | 42, 183, 386 |
| SsiI | CCGC | 1 cut(s) | 106 |
| SspI | AATATT | 1 cut(s) | 10 |
| SspMI | CTAG | 1 cut(s) | 412 |
| StyI | CCWWGG | 1 cut(s) | 327 |
| TaaI | ACNGT | 1 cut(s) | 192 |
| TaqI | TCGA | 1 cut(s) | 270 |
| TasI | AATT | 3 cut(s) | 42, 183, 386 |
| TauI | GCSGC | 1 cut(s) | 109 |
| TfiI | GAWTC | 2 cut(s) | 17, 230 |
| Tru1I | TTAA | 1 cut(s) | 164 |
| Tru9I | TTAA | 1 cut(s) | 164 |
| TspDTI | ATGAA | 3 cut(s) | 118, 243, 267 |
| XapI | RAATTY | 1 cut(s) | 386 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 244 |
| XspI | CTAG | 1 cut(s) | 412 |