TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 29 - 191 | 1e-54 | TIR domain |
| TIR_2 | PF13676 | 31 - 127 | 1.5e-16 | TIR domain |
| NB-ARC | PF00931 | 216 - 373 | 1.4e-22 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 443 - 513 | 5.6e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_Zer-1 | PF25013 | 633 - 757 | 4e-06 | Zer-1-like, Leucine-rich repeats |
| LRR_13 | PF23286 | 681 - 767 | 1.9e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 708 - 788 | 1.6e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 836 - 895 | 5e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 883 - 966 | 9.3e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 907 - 966 | 5.5e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 954 - 1037 | 2.9e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 978 - 1050 | 1.3e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 1025 - 1108 | 8.4e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 1049 - 1118 | 1e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 1100 - 1266 | 5.1e-19 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 1120 - 1179 | 3e-09 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 93 |
| AccI | GTMKAC | 2 cut(s) | 516, 631 |
| AccII | CGCG | 1 cut(s) | 121 |
| AccIII | TCCGGA | 2 cut(s) | 2467, 3793 |
| AciI | CCGC | 5 cut(s) | 221, 564, 1157, 3751, 3849 |
| AcoI | YGGCCR | 1 cut(s) | 1790 |
| AcuI | CTGAAG | 3 cut(s) | 163, 416, 1948 |
| AcyI | GRCGYC | 2 cut(s) | 90, 3852 |
| AdeI | CACNNNGTG | 1 cut(s) | 1154 |
| AfaI | GTAC | 7 cut(s) | 146, 390, 1161, 1845, 1939, 2008, 3767 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 294, 2459, 2500, 3602 |
| AflII | CTTAAG | 1 cut(s) | 2525 |
| AflIII | ACRYGT | 2 cut(s) | 385, 726 |
| AgeI | ACCGGT | 1 cut(s) | 519 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 638 |
| AjiI | CACGTC | 2 cut(s) | 928, 1154 |
| AjnI | CCWGG | 2 cut(s) | 231, 3830 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 597, 629, 2385, 2417 |
| Alw21I | GWGCWC | 1 cut(s) | 1721 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2150, 3831 |
| Ama87I | CYCGRG | 4 cut(s) | 339, 567, 982, 1550 |
| Aor13HI | TCCGGA | 2 cut(s) | 2467, 3793 |
| AoxI | GGCC | 5 cut(s) | 689, 979, 1174, 1630, 1790 |
| ApaI | GGGCCC | 1 cut(s) | 693 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 827, 859 |
| AsiGI | ACCGGT | 1 cut(s) | 519 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1335 |
| AspLEI | GCGC | 2 cut(s) | 123, 1560 |
| AspS9I | GGNCC | 5 cut(s) | 522, 689, 690, 980, 1265 |
| AsuC2I | CCSGG | 3 cut(s) | 693, 983, 984 |
| AsuHPI | GGTGA | 8 cut(s) | 59, 425, 862, 1435, 1530, 1966, 3533, 3724 |
| AvaI | CYCGRG | 4 cut(s) | 339, 567, 982, 1550 |
| AvaII | GGWCC | 2 cut(s) | 522, 1265 |
| AxyI | CCTNAGG | 2 cut(s) | 1269, 2495 |
| BaeGI | GKGCMC | 1 cut(s) | 693 |
| BalI | TGGCCA | 1 cut(s) | 1792 |
| BamHI | GGATCC | 1 cut(s) | 376 |
| BanII | GRGCYC | 2 cut(s) | 693, 1721 |
| BbsI | GAAGAC | 2 cut(s) | 85, 259 |
| Bbv12I | GWGCWC | 1 cut(s) | 1721 |
| BceAI | ACGGC | 2 cut(s) | 1661, 3842 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1811, 1845 |
| BciT130I | CCWGG | 2 cut(s) | 233, 3832 |
| BciVI | GTATCC | 1 cut(s) | 109 |
| BclI | TGATCA | 2 cut(s) | 64, 862 |
| BcnI | CCSGG | 3 cut(s) | 693, 983, 984 |
| BfaI | CTAG | 5 cut(s) | 794, 1313, 1394, 1445, 3602 |
| BfmI | CTRYAG | 2 cut(s) | 757, 1867 |
| BfrI | CTTAAG | 1 cut(s) | 2525 |
| BfuI | GTATCC | 1 cut(s) | 109 |
| Bme1390I | CCNGG | 5 cut(s) | 233, 693, 983, 984, 3832 |
| Bme18I | GGWCC | 2 cut(s) | 522, 1265 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 638 |
| BmeT110I | CYCGRG | 4 cut(s) | 339, 567, 982, 1550 |
| BmgBI | CACGTC | 2 cut(s) | 928, 1154 |
| BmgT120I | GGNCC | 5 cut(s) | 522, 689, 690, 980, 1265 |
| BmiI | GGNNCC | 5 cut(s) | 378, 690, 691, 1204, 2025 |
| BmrFI | CCNGG | 5 cut(s) | 233, 693, 983, 984, 3832 |
| BoxI | GACNNNNGTC | 1 cut(s) | 817 |
| BpiI | GAAGAC | 2 cut(s) | 85, 259 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 457, 489 |
| BpmI | CTGGAG | 3 cut(s) | 215, 1767, 3853 |
| BpuEI | CTTGAG | 5 cut(s) | 274, 2146, 2359, 3169, 3382 |
| BpuMI | CCSGG | 3 cut(s) | 693, 983, 984 |
| BsaAI | YACGTR | 1 cut(s) | 727 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1074, 1430, 2418 |
| BsaHI | GRCGYC | 2 cut(s) | 90, 3852 |
| BsaI | GGTCTC | 1 cut(s) | 167 |
| BsaJI | CCNNGG | 4 cut(s) | 982, 1171, 2458, 3784 |
| BsaWI | WCCGGW | 3 cut(s) | 519, 2467, 3793 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 294, 2459, 2500, 3602 |
| Bse118I | RCCGGY | 1 cut(s) | 519 |
| Bse21I | CCTNAGG | 2 cut(s) | 1269, 2495 |
| Bse3DI | GCAATG | 1 cut(s) | 1814 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1074, 1430, 2418 |
| BseAI | TCCGGA | 2 cut(s) | 2467, 3793 |
| BseBI | CCWGG | 2 cut(s) | 233, 3832 |
| BseDI | CCNNGG | 4 cut(s) | 982, 1171, 2458, 3784 |
| BseJI | GATNNNNATC | 3 cut(s) | 1074, 1430, 2418 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 294, 2459, 2500, 3602 |
| BseMI | GCAATG | 1 cut(s) | 1814 |
| BseMII | CTCAG | 5 cut(s) | 89, 836, 1283, 1698, 3436 |
| BseRI | GAGGAG | 2 cut(s) | 219, 1244 |
| BseSI | GKGCMC | 1 cut(s) | 693 |
| BseYI | CCCAGC | 1 cut(s) | 3669 |
| BsgI | GTGCAG | 4 cut(s) | 1707, 2263, 3073, 3286 |
| Bsh1236I | CGCG | 1 cut(s) | 121 |
| BshFI | GGCC | 5 cut(s) | 691, 981, 1176, 1632, 1792 |
| BshTI | ACCGGT | 1 cut(s) | 519 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1721 |
| BsiHKCI | CYCGRG | 4 cut(s) | 339, 567, 982, 1550 |
| BsiSI | CCGG | 5 cut(s) | 520, 693, 983, 2468, 3794 |
| BslFI | GGGAC | 3 cut(s) | 569, 848, 1905 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 294, 2459, 2500, 3602 |
| BsmBI | CGTCTC | 5 cut(s) | 1743, 2335, 2506, 2719, 2932 |
| BsmFI | GGGAC | 3 cut(s) | 569, 848, 1905 |
| BsmI | GAATGC | 3 cut(s) | 332, 1106, 3530 |
| BsnI | GGCC | 5 cut(s) | 691, 981, 1176, 1632, 1792 |
| Bso31I | GGTCTC | 1 cut(s) | 167 |
| BsoBI | CYCGRG | 4 cut(s) | 339, 567, 982, 1550 |
| Bsp120I | GGGCCC | 1 cut(s) | 689 |
| Bsp1286I | GDGCHC | 2 cut(s) | 693, 1721 |
| Bsp13I | TCCGGA | 2 cut(s) | 2467, 3793 |
| Bsp1407I | TGTACA | 2 cut(s) | 1843, 1937 |
| BspACI | CCGC | 5 cut(s) | 221, 564, 1157, 3751, 3849 |
| BspANI | GGCC | 5 cut(s) | 691, 981, 1176, 1632, 1792 |
| BspCNI | CTCAG | 5 cut(s) | 90, 835, 1282, 1697, 3435 |
| BspEI | TCCGGA | 2 cut(s) | 2467, 3793 |
| BspFNI | CGCG | 1 cut(s) | 121 |
| BspHI | TCATGA | 1 cut(s) | 1033 |
| BspLI | GGNNCC | 5 cut(s) | 378, 690, 691, 1204, 2025 |
| BspMAI | CTGCAG | 1 cut(s) | 1871 |
| BspTI | CTTAAG | 1 cut(s) | 2525 |
| BspTNI | GGTCTC | 1 cut(s) | 167 |
| BsrDI | GCAATG | 1 cut(s) | 1814 |
| BsrFI | RCCGGY | 1 cut(s) | 519 |
| BsrGI | TGTACA | 2 cut(s) | 1843, 1937 |
| BssAI | RCCGGY | 1 cut(s) | 519 |
| BssECI | CCNNGG | 4 cut(s) | 982, 1171, 2458, 3784 |
| BssNI | GRCGYC | 2 cut(s) | 90, 3852 |
| BssT1I | CCWWGG | 1 cut(s) | 1171 |
| Bst2UI | CCWGG | 2 cut(s) | 233, 3832 |
| Bst6I | CTCTTC | 6 cut(s) | 196, 2193, 2577, 2790, 3003, 3216 |
| BstACI | GRCGYC | 2 cut(s) | 90, 3852 |
| BstAFI | CTTAAG | 1 cut(s) | 2525 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1154 |
| BstAUI | TGTACA | 2 cut(s) | 1843, 1937 |
| BstBAI | YACGTR | 1 cut(s) | 727 |
| BstC8I | GCNNGC | 5 cut(s) | 1351, 1371, 1402, 3723, 3727 |
| BstFNI | CGCG | 1 cut(s) | 121 |
| BstHHI | GCGC | 2 cut(s) | 123, 1560 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1154, 1789 |
| BstNI | CCWGG | 2 cut(s) | 233, 3832 |
| BstNSI | RCATGY | 2 cut(s) | 389, 1133 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 817 |
| BstSCI | CCNGG | 5 cut(s) | 231, 691, 981, 982, 3830 |
| BstSFI | CTRYAG | 2 cut(s) | 757, 1867 |
| BstSLI | GKGCMC | 1 cut(s) | 693 |
| BstUI | CGCG | 1 cut(s) | 121 |
| BstV2I | GAAGAC | 2 cut(s) | 85, 259 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1884 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1269, 2495 |
| BsuI | GTATCC | 1 cut(s) | 109 |
| BsuRI | GGCC | 5 cut(s) | 691, 981, 1176, 1632, 1792 |
| BtrI | CACGTC | 2 cut(s) | 928, 1154 |
| BtsI | GCAGTG | 5 cut(s) | 2368, 2752, 2965, 3178, 3391 |
| Cac8I | GCNNGC | 5 cut(s) | 1351, 1371, 1402, 3723, 3727 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2150, 3831 |
| CciI | TCATGA | 1 cut(s) | 1033 |
| CfoI | GCGC | 2 cut(s) | 123, 1560 |
| Cfr10I | RCCGGY | 1 cut(s) | 519 |
| Cfr13I | GGNCC | 5 cut(s) | 522, 689, 690, 980, 1265 |
| Cfr9I | CCCGGG | 1 cut(s) | 982 |
| CpoI | CGGWCCG | 1 cut(s) | 522 |
| CseI | GACGC | 2 cut(s) | 158, 3841 |
| Csp6I | GTAC | 7 cut(s) | 145, 389, 1160, 1844, 1938, 2007, 3766 |
| CspAI | ACCGGT | 1 cut(s) | 519 |
| CspI | CGGWCCG | 1 cut(s) | 522 |
| CviAII | CATG | 9 cut(s) | 386, 454, 673, 746, 1034, 1130, 1379, 1493, 1714 |
| CviQI | GTAC | 7 cut(s) | 145, 389, 1160, 1844, 1938, 2007, 3766 |
| DraI | TTTAAA | 1 cut(s) | 1360 |
| DraIII | CACNNNGTG | 1 cut(s) | 1154 |
| DriI | GACNNNNNGTC | 1 cut(s) | 638 |
| EaeI | YGGCCR | 1 cut(s) | 1790 |
| Eam1104I | CTCTTC | 6 cut(s) | 196, 2193, 2577, 2790, 3003, 3216 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 638 |
| EarI | CTCTTC | 6 cut(s) | 196, 2193, 2577, 2790, 3003, 3216 |
| EciI | GGCGGA | 1 cut(s) | 553 |
| Ecl136II | GAGCTC | 1 cut(s) | 1719 |
| Eco130I | CCWWGG | 1 cut(s) | 1171 |
| Eco147I | AGGCCT | 2 cut(s) | 1176, 1632 |
| Eco24I | GRGCYC | 2 cut(s) | 693, 1721 |
| Eco31I | GGTCTC | 1 cut(s) | 167 |
| Eco32I | GATATC | 1 cut(s) | 1662 |
| Eco47I | GGWCC | 2 cut(s) | 522, 1265 |
| Eco53kI | GAGCTC | 1 cut(s) | 1719 |
| Eco57I | CTGAAG | 3 cut(s) | 163, 416, 1948 |
| Eco81I | CCTNAGG | 2 cut(s) | 1269, 2495 |
| Eco88I | CYCGRG | 4 cut(s) | 339, 567, 982, 1550 |
| EcoICRI | GAGCTC | 1 cut(s) | 1719 |
| EcoO109I | RGGNCCY | 2 cut(s) | 689, 1265 |
| EcoRI | GAATTC | 3 cut(s) | 1736, 2463, 3789 |
| EcoRII | CCWGG | 2 cut(s) | 231, 3830 |
| EcoRV | GATATC | 1 cut(s) | 1662 |
| EcoT14I | CCWWGG | 1 cut(s) | 1171 |
| EcoT22I | ATGCAT | 3 cut(s) | 421, 1108, 1494 |
| EcoT38I | GRGCYC | 2 cut(s) | 693, 1721 |
| ErhI | CCWWGG | 1 cut(s) | 1171 |
| Esp3I | CGTCTC | 5 cut(s) | 1743, 2335, 2506, 2719, 2932 |
| FaeI | CATG | 9 cut(s) | 389, 457, 676, 749, 1037, 1133, 1382, 1496, 1717 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 798, 830, 1353, 1385 |
| FaqI | GGGAC | 3 cut(s) | 569, 848, 1905 |
| FatI | CATG | 9 cut(s) | 385, 453, 672, 745, 1033, 1129, 1378, 1492, 1713 |
| FauI | CCCGC | 1 cut(s) | 3744 |
| FauNDI | CATATG | 1 cut(s) | 586 |
| FbaI | TGATCA | 2 cut(s) | 64, 862 |
| FblI | GTMKAC | 2 cut(s) | 516, 631 |
| FriOI | GRGCYC | 2 cut(s) | 693, 1721 |
| FspBI | CTAG | 5 cut(s) | 794, 1313, 1394, 1445, 3602 |
| GlaI | GCGC | 2 cut(s) | 122, 1559 |
| GsaI | CCCAGC | 1 cut(s) | 3673 |
| GsuI | CTGGAG | 3 cut(s) | 215, 1767, 3853 |
| HaeIII | GGCC | 5 cut(s) | 691, 981, 1176, 1632, 1792 |
| HapII | CCGG | 5 cut(s) | 520, 693, 983, 2468, 3794 |
| HgaI | GACGC | 2 cut(s) | 158, 3841 |
| HhaI | GCGC | 2 cut(s) | 123, 1560 |
| Hin1I | GRCGYC | 2 cut(s) | 90, 3852 |
| Hin1II | CATG | 9 cut(s) | 389, 457, 676, 749, 1037, 1133, 1382, 1496, 1717 |
| Hin6I | GCGC | 2 cut(s) | 121, 1558 |
| HinP1I | GCGC | 2 cut(s) | 121, 1558 |
| HincII | GTYRAC | 3 cut(s) | 316, 1588, 2491 |
| HindII | GTYRAC | 3 cut(s) | 316, 1588, 2491 |
| HindIII | AAGCTT | 6 cut(s) | 194, 1080, 1367, 1398, 1678, 1697 |
| HpaII | CCGG | 5 cut(s) | 520, 693, 983, 2468, 3794 |
| HphI | GGTGA | 8 cut(s) | 59, 425, 862, 1435, 1530, 1966, 3533, 3724 |
| Hpy166II | GTNNAC | 7 cut(s) | 316, 517, 577, 632, 1588, 2007, 2491 |
| Hpy8I | GTNNAC | 7 cut(s) | 316, 517, 577, 632, 1588, 2007, 2491 |
| Hpy99I | CGWCG | 5 cut(s) | 92, 152, 1155, 1595, 3857 |
| HpyAV | CCTTC | 8 cut(s) | 157, 187, 1187, 1312, 1643, 1882, 2054, 2351 |
| HpyCH4IV | ACGT | 8 cut(s) | 90, 726, 927, 1153, 1474, 1593, 1752, 1894 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1154, 1789 |
| HpySE526I | ACGT | 8 cut(s) | 90, 726, 927, 1153, 1474, 1593, 1752, 1894 |
| Hsp92I | GRCGYC | 2 cut(s) | 90, 3852 |
| Hsp92II | CATG | 9 cut(s) | 389, 457, 676, 749, 1037, 1133, 1382, 1496, 1717 |
| HspAI | GCGC | 2 cut(s) | 121, 1558 |
| Kpn2I | TCCGGA | 2 cut(s) | 2467, 3793 |
| Ksp22I | TGATCA | 2 cut(s) | 64, 862 |
| LmnI | GCTCC | 4 cut(s) | 1208, 2470, 3796, 3834 |
| MaeI | CTAG | 5 cut(s) | 794, 1313, 1394, 1445, 3602 |
| MaeII | ACGT | 8 cut(s) | 90, 726, 927, 1153, 1474, 1593, 1752, 1894 |
| MaeIII | GTNAC | 8 cut(s) | 1536, 2056, 2363, 2534, 2747, 2960, 3173, 3386 |
| MhlI | GDGCHC | 2 cut(s) | 693, 1721 |
| MlsI | TGGCCA | 1 cut(s) | 1792 |
| MluNI | TGGCCA | 1 cut(s) | 1792 |
| MmeI | TCCRAC | 7 cut(s) | 140, 2184, 2568, 2781, 2994, 3207, 3572 |
| Mox20I | TGGCCA | 1 cut(s) | 1792 |
| Mph1103I | ATGCAT | 3 cut(s) | 421, 1108, 1494 |
| MroI | TCCGGA | 2 cut(s) | 2467, 3793 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1335 |
| MscI | TGGCCA | 1 cut(s) | 1792 |
| MslI | CAYNNNNRTG | 4 cut(s) | 585, 1487, 1882, 3682 |
| Msp20I | TGGCCA | 1 cut(s) | 1792 |
| MspA1I | CMGCKG | 2 cut(s) | 221, 1866 |
| MspCI | CTTAAG | 1 cut(s) | 2525 |
| MspI | CCGG | 5 cut(s) | 520, 693, 983, 2468, 3794 |
| MspR9I | CCNGG | 5 cut(s) | 233, 693, 983, 984, 3832 |
| Mva1269I | GAATGC | 3 cut(s) | 332, 1106, 3530 |
| MvaI | CCWGG | 2 cut(s) | 233, 3832 |
| MvnI | CGCG | 1 cut(s) | 121 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1154, 1789 |
| NciI | CCSGG | 3 cut(s) | 693, 983, 984 |
| NdeI | CATATG | 1 cut(s) | 586 |
| NlaIII | CATG | 9 cut(s) | 389, 457, 676, 749, 1037, 1133, 1382, 1496, 1717 |
| NlaIV | GGNNCC | 5 cut(s) | 378, 690, 691, 1204, 2025 |
| NmeAIII | GCCGAG | 1 cut(s) | 685 |
| NmuCI | GTSAC | 8 cut(s) | 1536, 2056, 2363, 2534, 2747, 2960, 3173, 3386 |
| NsiI | ATGCAT | 3 cut(s) | 421, 1108, 1494 |
| NspI | RCATGY | 2 cut(s) | 389, 1133 |
| PaeR7I | CTCGAG | 1 cut(s) | 339 |
| PagI | TCATGA | 1 cut(s) | 1033 |
| PceI | AGGCCT | 2 cut(s) | 1176, 1632 |
| PciI | ACATGT | 1 cut(s) | 385 |
| PctI | GAATGC | 3 cut(s) | 332, 1106, 3530 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1335 |
| PfeI | GAWTC | 9 cut(s) | 931, 1872, 1971, 1993, 2030, 2120, 2333, 3143, 3356 |
| PfoI | TCCNGGA | 1 cut(s) | 3830 |
| PinAI | ACCGGT | 1 cut(s) | 519 |
| Ppu21I | YACGTR | 1 cut(s) | 727 |
| PpuMI | RGGWCCY | 1 cut(s) | 1265 |
| PscI | ACATGT | 1 cut(s) | 385 |
| PshAI | GACNNNNGTC | 1 cut(s) | 817 |
| Psp124BI | GAGCTC | 1 cut(s) | 1721 |
| Psp5II | RGGWCCY | 1 cut(s) | 1265 |
| Psp6I | CCWGG | 2 cut(s) | 231, 3830 |
| PspFI | CCCAGC | 1 cut(s) | 3669 |
| PspGI | CCWGG | 2 cut(s) | 231, 3830 |
| PspN4I | GGNNCC | 5 cut(s) | 378, 690, 691, 1204, 2025 |
| PspOMI | GGGCCC | 1 cut(s) | 689 |
| PspPI | GGNCC | 5 cut(s) | 522, 689, 690, 980, 1265 |
| PspPPI | RGGWCCY | 1 cut(s) | 1265 |
| PspXI | VCTCGAGB | 1 cut(s) | 339 |
| PstI | CTGCAG | 1 cut(s) | 1871 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2150, 3831 |
| PvuII | CAGCTG | 1 cut(s) | 1866 |
| RsaI | GTAC | 7 cut(s) | 146, 390, 1161, 1845, 1939, 2008, 3767 |
| RsaNI | GTAC | 7 cut(s) | 145, 389, 1160, 1844, 1938, 2007, 3766 |
| RseI | CAYNNNNRTG | 4 cut(s) | 585, 1487, 1882, 3682 |
| Rsr2I | CGGWCCG | 1 cut(s) | 522 |
| RsrII | CGGWCCG | 1 cut(s) | 522 |
| SacI | GAGCTC | 1 cut(s) | 1721 |
| Sau96I | GGNCC | 5 cut(s) | 522, 689, 690, 980, 1265 |
| ScrFI | CCNGG | 5 cut(s) | 233, 693, 983, 984, 3832 |
| SduI | GDGCHC | 2 cut(s) | 693, 1721 |
| SfcI | CTRYAG | 2 cut(s) | 757, 1867 |
| Sfr274I | CTCGAG | 1 cut(s) | 339 |
| SinI | GGWCC | 2 cut(s) | 522, 1265 |
| SlaI | CTCGAG | 1 cut(s) | 339 |
| SmaI | CCCGGG | 1 cut(s) | 984 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 585, 1487, 1882, 3682 |
| SmlI | CTYRAG | 7 cut(s) | 289, 339, 2125, 2338, 2525, 3148, 3361 |
| SmoI | CTYRAG | 7 cut(s) | 289, 339, 2125, 2338, 2525, 3148, 3361 |
| SrfI | GCCCGGGC | 1 cut(s) | 984 |
| SseBI | AGGCCT | 2 cut(s) | 1176, 1632 |
| SsiI | CCGC | 5 cut(s) | 221, 564, 1157, 3751, 3849 |
| SspI | AATATT | 2 cut(s) | 1855, 3437 |
| SspMI | CTAG | 5 cut(s) | 794, 1313, 1394, 1445, 3602 |
| SstI | GAGCTC | 1 cut(s) | 1721 |
| StuI | AGGCCT | 2 cut(s) | 1176, 1632 |
| StyD4I | CCNGG | 5 cut(s) | 231, 691, 981, 982, 3830 |
| StyI | CCWWGG | 1 cut(s) | 1171 |
| TaiI | ACGT | 8 cut(s) | 93, 729, 930, 1156, 1477, 1596, 1755, 1897 |
| TaqI | TCGA | 4 cut(s) | 106, 340, 3573, 3816 |
| TatI | WGTACW | 2 cut(s) | 1843, 1937 |
| TauI | GCSGC | 2 cut(s) | 224, 3852 |
| TfiI | GAWTC | 9 cut(s) | 931, 1872, 1971, 1993, 2030, 2120, 2333, 3143, 3356 |
| TseFI | GTSAC | 8 cut(s) | 1536, 2056, 2363, 2534, 2747, 2960, 3173, 3386 |
| Tsp45I | GTSAC | 8 cut(s) | 1536, 2056, 2363, 2534, 2747, 2960, 3173, 3386 |
| TspDTI | ATGAA | 8 cut(s) | 24, 573, 1050, 1560, 1729, 1749, 1937, 3621 |
| TspGWI | ACGGA | 1 cut(s) | 1791 |
| TspMI | CCCGGG | 1 cut(s) | 982 |
| Vha464I | CTTAAG | 1 cut(s) | 2525 |
| VpaK11BI | GGWCC | 2 cut(s) | 522, 1265 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XceI | RCATGY | 2 cut(s) | 389, 1133 |
| XhoI | CTCGAG | 1 cut(s) | 339 |
| XmaI | CCCGGG | 1 cut(s) | 982 |
| XmiI | GTMKAC | 2 cut(s) | 516, 631 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1335 |
| XspI | CTAG | 5 cut(s) | 794, 1313, 1394, 1445, 3602 |
| ZraI | GACGTC | 1 cut(s) | 91 |
| Zsp2I | ATGCAT | 3 cut(s) | 421, 1108, 1494 |