Transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 302 |
| AccI | GTMKAC | 1 cut(s) | 93 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 11 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 100 |
| AluBI | AGCT | 1 cut(s) | 53 |
| AluI | AGCT | 1 cut(s) | 53 |
| Alw21I | GWGCWC | 1 cut(s) | 55 |
| AsuHPI | GGTGA | 3 cut(s) | 244, 274, 295 |
| BanII | GRGCYC | 1 cut(s) | 55 |
| Bbv12I | GWGCWC | 1 cut(s) | 55 |
| BccI | CCATC | 2 cut(s) | 103, 133 |
| BfmI | CTRYAG | 2 cut(s) | 6, 246 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 100 |
| BmrI | ACTGGG | 1 cut(s) | 319 |
| BmsI | GCATC | 1 cut(s) | 241 |
| BmuI | ACTGGG | 1 cut(s) | 319 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 11 |
| Bse1I | ACTGG | 2 cut(s) | 300, 314 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 11 |
| BseNI | ACTGG | 2 cut(s) | 300, 314 |
| BsiHKAI | GWGCWC | 1 cut(s) | 55 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 1 cut(s) | 55 |
| BspMAI | CTGCAG | 1 cut(s) | 10 |
| BsrI | ACTGG | 2 cut(s) | 300, 314 |
| Bst6I | CTCTTC | 2 cut(s) | 233, 269 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 51 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 50, 187 |
| BstSFI | CTRYAG | 2 cut(s) | 6, 246 |
| BtsI | GCAGTG | 1 cut(s) | 51 |
| BtsIMutI | CAGTG | 2 cut(s) | 51, 307 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 51 |
| CviAII | CATG | 2 cut(s) | 56, 97 |
| CviJI | RGCY | 3 cut(s) | 53, 64, 83 |
| CviKI_1 | RGCY | 3 cut(s) | 53, 64, 83 |
| DriI | GACNNNNNGTC | 1 cut(s) | 100 |
| Eam1104I | CTCTTC | 2 cut(s) | 233, 269 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 100 |
| EarI | CTCTTC | 2 cut(s) | 233, 269 |
| Ecl136II | GAGCTC | 1 cut(s) | 53 |
| Eco24I | GRGCYC | 1 cut(s) | 55 |
| Eco53kI | GAGCTC | 1 cut(s) | 53 |
| EcoICRI | GAGCTC | 1 cut(s) | 53 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 9 |
| EcoT38I | GRGCYC | 1 cut(s) | 55 |
| FaeI | CATG | 2 cut(s) | 59, 100 |
| FatI | CATG | 2 cut(s) | 55, 96 |
| FblI | GTMKAC | 1 cut(s) | 93 |
| FriOI | GRGCYC | 1 cut(s) | 55 |
| Hin1II | CATG | 2 cut(s) | 59, 100 |
| HinfI | GANTC | 2 cut(s) | 121, 195 |
| HphI | GGTGA | 3 cut(s) | 244, 274, 295 |
| Hpy166II | GTNNAC | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 1 cut(s) | 19 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| Hpy8I | GTNNAC | 1 cut(s) | 94 |
| HpyAV | CCTTC | 2 cut(s) | 223, 274 |
| HpyCH4V | TGCA | 1 cut(s) | 8 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 50, 187 |
| Hsp92II | CATG | 2 cut(s) | 59, 100 |
| LmnI | GCTCC | 1 cut(s) | 313 |
| LpnPI | CCDG | 5 cut(s) | 18, 159, 245, 281, 295 |
| LweI | GCATC | 1 cut(s) | 241 |
| MaeIII | GTNAC | 1 cut(s) | 232 |
| MboII | GAAGA | 4 cut(s) | 118, 235, 250, 286 |
| MhlI | GDGCHC | 1 cut(s) | 55 |
| MluCI | AATT | 3 cut(s) | 216, 290, 303 |
| MlyI | GAGTC | 1 cut(s) | 130 |
| MnlI | CCTC | 4 cut(s) | 34, 209, 270, 279 |
| MseI | TTAA | 1 cut(s) | 186 |
| MslI | CAYNNNNRTG | 1 cut(s) | 260 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 50, 187 |
| NlaIII | CATG | 2 cut(s) | 59, 100 |
| NmuCI | GTSAC | 1 cut(s) | 232 |
| PfeI | GAWTC | 1 cut(s) | 195 |
| PleI | GAGTC | 1 cut(s) | 129 |
| PpsI | GAGTC | 1 cut(s) | 129 |
| PsiI | TTATAA | 1 cut(s) | 302 |
| Psp124BI | GAGCTC | 1 cut(s) | 55 |
| PstI | CTGCAG | 1 cut(s) | 10 |
| RseI | CAYNNNNRTG | 1 cut(s) | 260 |
| SacI | GAGCTC | 1 cut(s) | 55 |
| SaqAI | TTAA | 1 cut(s) | 186 |
| SchI | GAGTC | 1 cut(s) | 130 |
| SduI | GDGCHC | 1 cut(s) | 55 |
| SetI | ASST | 5 cut(s) | 16, 55, 178, 234, 285 |
| SfaNI | GCATC | 1 cut(s) | 241 |
| SfcI | CTRYAG | 2 cut(s) | 6, 246 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 260 |
| Sse9I | AATT | 3 cut(s) | 216, 290, 303 |
| SstI | GAGCTC | 1 cut(s) | 55 |
| TaqI | TCGA | 2 cut(s) | 104, 145 |
| TasI | AATT | 3 cut(s) | 216, 290, 303 |
| TfiI | GAWTC | 1 cut(s) | 195 |
| Tru1I | TTAA | 1 cut(s) | 186 |
| Tru9I | TTAA | 1 cut(s) | 186 |
| TscAI | CASTG | 2 cut(s) | 51, 314 |
| TseFI | GTSAC | 1 cut(s) | 232 |
| Tsp45I | GTSAC | 1 cut(s) | 232 |
| TspDTI | ATGAA | 5 cut(s) | 19, 113, 236, 242, 281 |
| TspRI | CASTG | 2 cut(s) | 51, 314 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 9 |
| XmiI | GTMKAC | 1 cut(s) | 93 |