regulation of response to stimulus
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 9 - 190 | 3.5e-13 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 915 |
| AbsI | CCTCGAGG | 1 cut(s) | 529 |
| AccI | GTMKAC | 1 cut(s) | 376 |
| AciI | CCGC | 3 cut(s) | 1050, 1069, 1190 |
| AclWI | GGATC | 2 cut(s) | 1116, 1129 |
| AcvI | CACGTG | 1 cut(s) | 313 |
| AfaI | GTAC | 3 cut(s) | 121, 1281, 1285 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 187, 263, 1030 |
| AflII | CTTAAG | 1 cut(s) | 80 |
| AgsI | TTSAA | 8 cut(s) | 22, 167, 210, 610, 616, 722, 782, 1019 |
| AjnI | CCWGG | 1 cut(s) | 658 |
| AluBI | AGCT | 2 cut(s) | 687, 953 |
| AluI | AGCT | 2 cut(s) | 687, 953 |
| Alw21I | GWGCWC | 2 cut(s) | 638, 1059 |
| Alw26I | GTCTC | 1 cut(s) | 158 |
| Alw44I | GTGCAC | 1 cut(s) | 1055 |
| AlwI | GGATC | 2 cut(s) | 1116, 1129 |
| Ama87I | CYCGRG | 1 cut(s) | 529 |
| AoxI | GGCC | 1 cut(s) | 1166 |
| ApaLI | GTGCAC | 1 cut(s) | 1055 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1086 |
| AspS9I | GGNCC | 1 cut(s) | 1103 |
| AsuHPI | GGTGA | 2 cut(s) | 202, 587 |
| AsuII | TTCGAA | 1 cut(s) | 1181 |
| AvaI | CYCGRG | 1 cut(s) | 529 |
| AvaII | GGWCC | 1 cut(s) | 1103 |
| BaeGI | GKGCMC | 1 cut(s) | 1059 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 223, 256 |
| BamHI | GGATCC | 1 cut(s) | 1121 |
| BanII | GRGCYC | 1 cut(s) | 966 |
| BbrPI | CACGTG | 1 cut(s) | 313 |
| Bbv12I | GWGCWC | 2 cut(s) | 638, 1059 |
| BccI | CCATC | 1 cut(s) | 926 |
| BciT130I | CCWGG | 1 cut(s) | 660 |
| BciVI | GTATCC | 1 cut(s) | 251 |
| BclI | TGATCA | 2 cut(s) | 1195, 1219 |
| BcoDI | GTCTC | 1 cut(s) | 158 |
| BfaI | CTAG | 1 cut(s) | 714 |
| BfrI | CTTAAG | 1 cut(s) | 80 |
| BfuI | GTATCC | 1 cut(s) | 251 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 532 |
| Bme1390I | CCNGG | 1 cut(s) | 660 |
| Bme18I | GGWCC | 1 cut(s) | 1103 |
| BmeT110I | CYCGRG | 1 cut(s) | 529 |
| BmgT120I | GGNCC | 1 cut(s) | 1103 |
| BmiI | GGNNCC | 2 cut(s) | 1104, 1123 |
| BmrFI | CCNGG | 1 cut(s) | 660 |
| BmrI | ACTGGG | 1 cut(s) | 84 |
| BmsI | GCATC | 2 cut(s) | 167, 275 |
| BmuI | ACTGGG | 1 cut(s) | 84 |
| BpmI | CTGGAG | 1 cut(s) | 566 |
| Bpu10I | CCTNAGC | 1 cut(s) | 536 |
| Bpu14I | TTCGAA | 1 cut(s) | 1181 |
| Bsa29I | ATCGAT | 1 cut(s) | 1137 |
| BsaAI | YACGTR | 2 cut(s) | 313, 1283 |
| BsaBI | GATNNNNATC | 2 cut(s) | 483, 1197 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 187, 263, 1030 |
| Bse1I | ACTGG | 3 cut(s) | 79, 192, 430 |
| Bse3DI | GCAATG | 2 cut(s) | 102, 322 |
| Bse8I | GATNNNNATC | 2 cut(s) | 483, 1197 |
| BseBI | CCWGG | 1 cut(s) | 660 |
| BseCI | ATCGAT | 1 cut(s) | 1137 |
| BseGI | GGATG | 4 cut(s) | 290, 937, 1198, 1198 |
| BseJI | GATNNNNATC | 2 cut(s) | 483, 1197 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 187, 263, 1030 |
| BseMI | GCAATG | 2 cut(s) | 102, 322 |
| BseMII | CTCAG | 1 cut(s) | 1140 |
| BseNI | ACTGG | 3 cut(s) | 79, 192, 430 |
| BseRI | GAGGAG | 2 cut(s) | 1259, 1262 |
| BseSI | GKGCMC | 1 cut(s) | 1059 |
| BseYI | CCCAGC | 1 cut(s) | 1186 |
| BshFI | GGCC | 1 cut(s) | 1168 |
| BshVI | ATCGAT | 1 cut(s) | 1137 |
| BsiHKAI | GWGCWC | 2 cut(s) | 638, 1059 |
| BsiHKCI | CYCGRG | 1 cut(s) | 529 |
| BslFI | GGGAC | 1 cut(s) | 1116 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 187, 263, 1030 |
| BsmAI | GTCTC | 1 cut(s) | 158 |
| BsmBI | CGTCTC | 1 cut(s) | 158 |
| BsmFI | GGGAC | 1 cut(s) | 1116 |
| BsmI | GAATGC | 1 cut(s) | 389 |
| BsnI | GGCC | 1 cut(s) | 1168 |
| BsoBI | CYCGRG | 1 cut(s) | 529 |
| Bsp119I | TTCGAA | 1 cut(s) | 1181 |
| Bsp1286I | GDGCHC | 3 cut(s) | 638, 966, 1059 |
| Bsp143I | GATC | 3 cut(s) | 1121, 1195, 1219 |
| BspACI | CCGC | 3 cut(s) | 1050, 1069, 1190 |
| BspANI | GGCC | 1 cut(s) | 1168 |
| BspCNI | CTCAG | 1 cut(s) | 1139 |
| BspDI | ATCGAT | 1 cut(s) | 1137 |
| BspLI | GGNNCC | 2 cut(s) | 1104, 1123 |
| BspPI | GGATC | 2 cut(s) | 1116, 1129 |
| BspT104I | TTCGAA | 1 cut(s) | 1181 |
| BspTI | CTTAAG | 1 cut(s) | 80 |
| BsrDI | GCAATG | 2 cut(s) | 102, 322 |
| BsrI | ACTGG | 3 cut(s) | 79, 192, 430 |
| BssMI | GATC | 3 cut(s) | 1121, 1195, 1219 |
| Bst2UI | CCWGG | 1 cut(s) | 660 |
| Bst4CI | ACNGT | 3 cut(s) | 239, 681, 1263 |
| BstAFI | CTTAAG | 1 cut(s) | 80 |
| BstBAI | YACGTR | 2 cut(s) | 313, 1283 |
| BstBI | TTCGAA | 1 cut(s) | 1181 |
| BstC8I | GCNNGC | 2 cut(s) | 1036, 1211 |
| BstDEI | CTNAG | 4 cut(s) | 217, 473, 536, 1126 |
| BstF5I | GGATG | 4 cut(s) | 290, 937, 1198, 1198 |
| BstKTI | GATC | 3 cut(s) | 1124, 1198, 1222 |
| BstMAI | GTCTC | 1 cut(s) | 158 |
| BstMBI | GATC | 3 cut(s) | 1121, 1195, 1219 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 532 |
| BstNI | CCWGG | 1 cut(s) | 660 |
| BstNSI | RCATGY | 1 cut(s) | 458 |
| BstSCI | CCNGG | 1 cut(s) | 658 |
| BstSLI | GKGCMC | 1 cut(s) | 1059 |
| BstSNI | TACGTA | 1 cut(s) | 1283 |
| BstX2I | RGATCY | 1 cut(s) | 1121 |
| BstYI | RGATCY | 1 cut(s) | 1121 |
| Bsu15I | ATCGAT | 1 cut(s) | 1137 |
| BsuI | GTATCC | 1 cut(s) | 251 |
| BsuRI | GGCC | 1 cut(s) | 1168 |
| BsuTUI | ATCGAT | 1 cut(s) | 1137 |
| BtgZI | GCGATG | 1 cut(s) | 678 |
| BtsCI | GGATG | 4 cut(s) | 290, 937, 1198, 1198 |
| BtsI | GCAGTG | 1 cut(s) | 848 |
| BtsIMutI | CAGTG | 1 cut(s) | 848 |
| Cac8I | GCNNGC | 2 cut(s) | 1036, 1211 |
| Cfr13I | GGNCC | 1 cut(s) | 1103 |
| ClaI | ATCGAT | 1 cut(s) | 1137 |
| Csp6I | GTAC | 3 cut(s) | 120, 1280, 1284 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 700, 735 |
| CviAII | CATG | 6 cut(s) | 230, 455, 741, 943, 956, 967 |
| CviQI | GTAC | 3 cut(s) | 120, 1280, 1284 |
| DdeI | CTNAG | 4 cut(s) | 217, 473, 536, 1126 |
| DpnI | GATC | 3 cut(s) | 1123, 1197, 1221 |
| DpnII | GATC | 3 cut(s) | 1121, 1195, 1219 |
| Eco105I | TACGTA | 1 cut(s) | 1283 |
| Eco24I | GRGCYC | 1 cut(s) | 966 |
| Eco32I | GATATC | 2 cut(s) | 872, 1132 |
| Eco47I | GGWCC | 1 cut(s) | 1103 |
| Eco72I | CACGTG | 1 cut(s) | 313 |
| Eco88I | CYCGRG | 1 cut(s) | 529 |
| EcoRII | CCWGG | 1 cut(s) | 658 |
| EcoRV | GATATC | 2 cut(s) | 872, 1132 |
| EcoT22I | ATGCAT | 2 cut(s) | 389, 742 |
| EcoT38I | GRGCYC | 1 cut(s) | 966 |
| Esp3I | CGTCTC | 1 cut(s) | 158 |
| FaeI | CATG | 6 cut(s) | 233, 458, 744, 946, 959, 970 |
| FaqI | GGGAC | 1 cut(s) | 1116 |
| FatI | CATG | 6 cut(s) | 229, 454, 740, 942, 955, 966 |
| FauI | CCCGC | 1 cut(s) | 1043 |
| FauNDI | CATATG | 1 cut(s) | 754 |
| FbaI | TGATCA | 2 cut(s) | 1195, 1219 |
| FblI | GTMKAC | 1 cut(s) | 376 |
| FokI | GGATG | 4 cut(s) | 297, 944, 1185, 1205 |
| FriOI | GRGCYC | 1 cut(s) | 966 |
| FspBI | CTAG | 1 cut(s) | 714 |
| GsaI | CCCAGC | 1 cut(s) | 1190 |
| GsuI | CTGGAG | 1 cut(s) | 566 |
| HaeIII | GGCC | 1 cut(s) | 1168 |
| Hin1II | CATG | 6 cut(s) | 233, 458, 744, 946, 959, 970 |
| HincII | GTYRAC | 2 cut(s) | 403, 552 |
| HindII | GTYRAC | 2 cut(s) | 403, 552 |
| HinfI | GANTC | 4 cut(s) | 5, 172, 616, 623 |
| HpaI | GTTAAC | 1 cut(s) | 403 |
| HphI | GGTGA | 2 cut(s) | 202, 587 |
| Hpy166II | GTNNAC | 4 cut(s) | 377, 403, 552, 1057 |
| Hpy188I | TCNGA | 4 cut(s) | 298, 862, 1129, 1237 |
| Hpy188III | TCNNGA | 4 cut(s) | 443, 488, 545, 620 |
| Hpy8I | GTNNAC | 4 cut(s) | 377, 403, 552, 1057 |
| HpyAV | CCTTC | 6 cut(s) | 63, 263, 470, 716, 1022, 1179 |
| HpyCH4III | ACNGT | 3 cut(s) | 239, 681, 1263 |
| HpyCH4IV | ACGT | 5 cut(s) | 151, 261, 312, 879, 1282 |
| HpyCH4V | TGCA | 9 cut(s) | 65, 148, 288, 387, 432, 498, 646, 740, 1057 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 532 |
| HpyF3I | CTNAG | 4 cut(s) | 217, 473, 536, 1126 |
| HpySE526I | ACGT | 5 cut(s) | 151, 261, 312, 879, 1282 |
| Hsp92II | CATG | 6 cut(s) | 233, 458, 744, 946, 959, 970 |
| Ksp22I | TGATCA | 2 cut(s) | 1195, 1219 |
| KspAI | GTTAAC | 1 cut(s) | 403 |
| Kzo9I | GATC | 3 cut(s) | 1121, 1195, 1219 |
| LmnI | GCTCC | 1 cut(s) | 1249 |
| LweI | GCATC | 2 cut(s) | 167, 275 |
| MaeI | CTAG | 1 cut(s) | 714 |
| MaeII | ACGT | 5 cut(s) | 151, 261, 312, 879, 1282 |
| MaeIII | GTNAC | 3 cut(s) | 190, 649, 875 |
| MalI | GATC | 3 cut(s) | 1123, 1197, 1221 |
| MboI | GATC | 3 cut(s) | 1121, 1195, 1219 |
| MboII | GAAGA | 2 cut(s) | 1088, 1170 |
| MfeI | CAATTG | 2 cut(s) | 60, 641 |
| MflI | RGATCY | 1 cut(s) | 1121 |
| MhlI | GDGCHC | 3 cut(s) | 638, 966, 1059 |
| MlyI | GAGTC | 1 cut(s) | 181 |
| MmeI | TCCRAC | 3 cut(s) | 573, 739, 909 |
| Mph1103I | ATGCAT | 2 cut(s) | 389, 742 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1086 |
| MseI | TTAA | 5 cut(s) | 81, 279, 402, 1011, 1041 |
| MslI | CAYNNNNRTG | 2 cut(s) | 138, 971 |
| MspA1I | CMGCKG | 1 cut(s) | 1190 |
| MspCI | CTTAAG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 1 cut(s) | 660 |
| MunI | CAATTG | 2 cut(s) | 60, 641 |
| Mva1269I | GAATGC | 1 cut(s) | 389 |
| MvaI | CCWGG | 1 cut(s) | 660 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 532 |
| NdeI | CATATG | 1 cut(s) | 754 |
| NdeII | GATC | 3 cut(s) | 1121, 1195, 1219 |
| NlaIII | CATG | 6 cut(s) | 233, 458, 744, 946, 959, 970 |
| NlaIV | GGNNCC | 2 cut(s) | 1104, 1123 |
| NmuCI | GTSAC | 1 cut(s) | 190 |
| NsiI | ATGCAT | 2 cut(s) | 389, 742 |
| NspI | RCATGY | 1 cut(s) | 458 |
| NspV | TTCGAA | 1 cut(s) | 1181 |
| PaeR7I | CTCGAG | 1 cut(s) | 529 |
| PctI | GAATGC | 1 cut(s) | 389 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1086 |
| PfeI | GAWTC | 3 cut(s) | 5, 616, 623 |
| PleI | GAGTC | 1 cut(s) | 180 |
| PmaCI | CACGTG | 1 cut(s) | 313 |
| PmlI | CACGTG | 1 cut(s) | 313 |
| PpsI | GAGTC | 1 cut(s) | 180 |
| Ppu21I | YACGTR | 2 cut(s) | 313, 1283 |
| PsiI | TTATAA | 1 cut(s) | 915 |
| Psp6I | CCWGG | 1 cut(s) | 658 |
| PspCI | CACGTG | 1 cut(s) | 313 |
| PspFI | CCCAGC | 1 cut(s) | 1186 |
| PspGI | CCWGG | 1 cut(s) | 658 |
| PspN4I | GGNNCC | 2 cut(s) | 1104, 1123 |
| PspPI | GGNCC | 1 cut(s) | 1103 |
| PspXI | VCTCGAGB | 1 cut(s) | 529 |
| PsuI | RGATCY | 1 cut(s) | 1121 |
| RsaI | GTAC | 3 cut(s) | 121, 1281, 1285 |
| RsaNI | GTAC | 3 cut(s) | 120, 1280, 1284 |
| RseI | CAYNNNNRTG | 2 cut(s) | 138, 971 |
| SaqAI | TTAA | 5 cut(s) | 81, 279, 402, 1011, 1041 |
| Sau3AI | GATC | 3 cut(s) | 1121, 1195, 1219 |
| Sau96I | GGNCC | 1 cut(s) | 1103 |
| SchI | GAGTC | 1 cut(s) | 181 |
| ScrFI | CCNGG | 1 cut(s) | 660 |
| SduI | GDGCHC | 3 cut(s) | 638, 966, 1059 |
| SfaNI | GCATC | 2 cut(s) | 167, 275 |
| Sfr274I | CTCGAG | 1 cut(s) | 529 |
| SfuI | TTCGAA | 1 cut(s) | 1181 |
| SinI | GGWCC | 1 cut(s) | 1103 |
| SlaI | CTCGAG | 1 cut(s) | 529 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 138, 971 |
| SmlI | CTYRAG | 2 cut(s) | 80, 529 |
| SmoI | CTYRAG | 2 cut(s) | 80, 529 |
| SnaBI | TACGTA | 1 cut(s) | 1283 |
| SsiI | CCGC | 3 cut(s) | 1050, 1069, 1190 |
| SspMI | CTAG | 1 cut(s) | 714 |
| StyD4I | CCNGG | 1 cut(s) | 658 |
| TaaI | ACNGT | 3 cut(s) | 239, 681, 1263 |
| TaiI | ACGT | 5 cut(s) | 154, 264, 315, 882, 1285 |
| TaqI | TCGA | 4 cut(s) | 175, 530, 1137, 1181 |
| TfiI | GAWTC | 3 cut(s) | 5, 616, 623 |
| Tru1I | TTAA | 5 cut(s) | 81, 279, 402, 1011, 1041 |
| Tru9I | TTAA | 5 cut(s) | 81, 279, 402, 1011, 1041 |
| TscAI | CASTG | 1 cut(s) | 855 |
| TseFI | GTSAC | 1 cut(s) | 190 |
| Tsp45I | GTSAC | 1 cut(s) | 190 |
| TspDTI | ATGAA | 6 cut(s) | 45, 311, 681, 931, 1095, 1158 |
| TspRI | CASTG | 1 cut(s) | 855 |
| Vha464I | CTTAAG | 1 cut(s) | 80 |
| VneI | GTGCAC | 1 cut(s) | 1055 |
| VpaK11BI | GGWCC | 1 cut(s) | 1103 |
| XceI | RCATGY | 1 cut(s) | 458 |
| XhoI | CTCGAG | 1 cut(s) | 529 |
| XmiI | GTMKAC | 1 cut(s) | 376 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1086 |
| XspI | CTAG | 1 cut(s) | 714 |
| Zsp2I | ATGCAT | 2 cut(s) | 389, 742 |