TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 14 |
| AccII | CGCG | 1 cut(s) | 251 |
| AciI | CCGC | 3 cut(s) | 112, 199, 251 |
| AclWI | GGATC | 3 cut(s) | 227, 294, 556 |
| AcuI | CTGAAG | 2 cut(s) | 333, 504 |
| AfaI | GTAC | 2 cut(s) | 53, 248 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 545 |
| AflIII | ACRYGT | 2 cut(s) | 57, 316 |
| AgsI | TTSAA | 2 cut(s) | 166, 344 |
| AjiI | CACGTC | 1 cut(s) | 58 |
| AluBI | AGCT | 4 cut(s) | 69, 277, 347, 488 |
| AluI | AGCT | 4 cut(s) | 69, 277, 347, 488 |
| Alw26I | GTCTC | 1 cut(s) | 272 |
| AlwI | GGATC | 3 cut(s) | 227, 294, 556 |
| AoxI | GGCC | 3 cut(s) | 103, 201, 536 |
| ApeKI | GCWGC | 3 cut(s) | 5, 488, 569 |
| AspS9I | GGNCC | 2 cut(s) | 103, 201 |
| AsuHPI | GGTGA | 1 cut(s) | 292 |
| BanI | GGYRCC | 1 cut(s) | 14 |
| BbsI | GAAGAC | 1 cut(s) | 87 |
| BbvI | GCAGC | 1 cut(s) | 475 |
| BccI | CCATC | 3 cut(s) | 114, 212, 419 |
| BcoDI | GTCTC | 1 cut(s) | 272 |
| BfaI | CTAG | 1 cut(s) | 377 |
| BisI | GCNGC | 3 cut(s) | 6, 489, 570 |
| BlsI | GCNGC | 3 cut(s) | 7, 490, 571 |
| BmgBI | CACGTC | 1 cut(s) | 58 |
| BmgT120I | GGNCC | 2 cut(s) | 103, 201 |
| BmiI | GGNNCC | 1 cut(s) | 16 |
| BpiI | GAAGAC | 1 cut(s) | 87 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 460, 492 |
| BpmI | CTGGAG | 1 cut(s) | 329 |
| BpuEI | CTTGAG | 1 cut(s) | 85 |
| BsaBI | GATNNNNATC | 1 cut(s) | 224 |
| BsaJI | CCNNGG | 1 cut(s) | 10 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 545 |
| Bse1I | ACTGG | 1 cut(s) | 312 |
| Bse3DI | GCAATG | 1 cut(s) | 470 |
| Bse8I | GATNNNNATC | 1 cut(s) | 224 |
| BseDI | CCNNGG | 1 cut(s) | 10 |
| BseGI | GGATG | 1 cut(s) | 29 |
| BseJI | GATNNNNATC | 1 cut(s) | 224 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 545 |
| BseMI | GCAATG | 1 cut(s) | 470 |
| BseMII | CTCAG | 1 cut(s) | 513 |
| BseNI | ACTGG | 1 cut(s) | 312 |
| BseRI | GAGGAG | 2 cut(s) | 10, 25 |
| BseXI | GCAGC | 1 cut(s) | 475 |
| BsgI | GTGCAG | 1 cut(s) | 316 |
| Bsh1236I | CGCG | 1 cut(s) | 251 |
| BshFI | GGCC | 3 cut(s) | 105, 203, 538 |
| BshNI | GGYRCC | 1 cut(s) | 14 |
| BslFI | GGGAC | 1 cut(s) | 544 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 545 |
| BsmAI | GTCTC | 1 cut(s) | 272 |
| BsmFI | GGGAC | 1 cut(s) | 544 |
| BsnI | GGCC | 3 cut(s) | 105, 203, 538 |
| Bsp143I | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| BspACI | CCGC | 3 cut(s) | 112, 199, 251 |
| BspANI | GGCC | 3 cut(s) | 105, 203, 538 |
| BspCNI | CTCAG | 1 cut(s) | 514 |
| BspFNI | CGCG | 1 cut(s) | 251 |
| BspLI | GGNNCC | 1 cut(s) | 16 |
| BspPI | GGATC | 3 cut(s) | 227, 294, 556 |
| BspT107I | GGYRCC | 1 cut(s) | 14 |
| BsrDI | GCAATG | 1 cut(s) | 470 |
| BsrI | ACTGG | 1 cut(s) | 312 |
| BssECI | CCNNGG | 1 cut(s) | 10 |
| BssMI | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| BssT1I | CCWWGG | 1 cut(s) | 10 |
| Bst4CI | ACNGT | 1 cut(s) | 195 |
| Bst6I | CTCTTC | 3 cut(s) | 28, 204, 396 |
| BstC8I | GCNNGC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 522 |
| BstF5I | GGATG | 1 cut(s) | 29 |
| BstFNI | CGCG | 1 cut(s) | 251 |
| BstKTI | GATC | 5 cut(s) | 222, 288, 302, 511, 551 |
| BstMAI | GTCTC | 1 cut(s) | 272 |
| BstMBI | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 75, 102, 111 |
| BstNSI | RCATGY | 1 cut(s) | 320 |
| BstUI | CGCG | 1 cut(s) | 251 |
| BstV1I | GCAGC | 1 cut(s) | 475 |
| BstV2I | GAAGAC | 1 cut(s) | 87 |
| BstX2I | RGATCY | 2 cut(s) | 219, 299 |
| BstYI | RGATCY | 2 cut(s) | 219, 299 |
| BsuRI | GGCC | 3 cut(s) | 105, 203, 538 |
| BtrI | CACGTC | 1 cut(s) | 58 |
| BtsCI | GGATG | 1 cut(s) | 29 |
| BtsIMutI | CAGTG | 1 cut(s) | 519 |
| Cac8I | GCNNGC | 1 cut(s) | 201 |
| Cfr13I | GGNCC | 2 cut(s) | 103, 201 |
| Csp6I | GTAC | 2 cut(s) | 52, 247 |
| CviAII | CATG | 3 cut(s) | 289, 317, 573 |
| CviQI | GTAC | 2 cut(s) | 52, 247 |
| DdeI | CTNAG | 1 cut(s) | 522 |
| DpnI | GATC | 5 cut(s) | 221, 287, 301, 510, 550 |
| DpnII | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| Eam1104I | CTCTTC | 3 cut(s) | 28, 204, 396 |
| EarI | CTCTTC | 3 cut(s) | 28, 204, 396 |
| Eco130I | CCWWGG | 1 cut(s) | 10 |
| Eco57I | CTGAAG | 2 cut(s) | 333, 504 |
| EcoT14I | CCWWGG | 1 cut(s) | 10 |
| ErhI | CCWWGG | 1 cut(s) | 10 |
| FaeI | CATG | 3 cut(s) | 292, 320, 576 |
| FaiI | YATR | 5 cut(s) | 290, 318, 336, 567, 574 |
| FaqI | GGGAC | 1 cut(s) | 544 |
| FatI | CATG | 3 cut(s) | 288, 316, 572 |
| FauI | CCCGC | 1 cut(s) | 192 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 489, 570 |
| FokI | GGATG | 1 cut(s) | 16 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 489, 570 |
| FspBI | CTAG | 1 cut(s) | 377 |
| GluI | GCNGC | 3 cut(s) | 6, 489, 570 |
| GsuI | CTGGAG | 1 cut(s) | 329 |
| HaeIII | GGCC | 3 cut(s) | 105, 203, 538 |
| Hin1II | CATG | 3 cut(s) | 292, 320, 576 |
| HindIII | AAGCTT | 1 cut(s) | 345 |
| HinfI | GANTC | 2 cut(s) | 212, 254 |
| HphI | GGTGA | 1 cut(s) | 292 |
| Hpy188I | TCNGA | 2 cut(s) | 352, 393 |
| Hpy188III | TCNNGA | 3 cut(s) | 46, 64, 358 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyAV | CCTTC | 1 cut(s) | 362 |
| HpyCH4III | ACNGT | 1 cut(s) | 195 |
| HpyCH4IV | ACGT | 1 cut(s) | 57 |
| HpyCH4V | TGCA | 3 cut(s) | 297, 491, 569 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 75, 102, 111 |
| HpyF3I | CTNAG | 1 cut(s) | 522 |
| HpySE526I | ACGT | 1 cut(s) | 57 |
| Hsp92II | CATG | 3 cut(s) | 292, 320, 576 |
| Kzo9I | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| LmnI | GCTCC | 1 cut(s) | 310 |
| LpnPI | CCDG | 7 cut(s) | 31, 263, 293, 343, 350, 486, 527 |
| Lsp1109I | GCAGC | 1 cut(s) | 475 |
| MaeI | CTAG | 1 cut(s) | 377 |
| MaeII | ACGT | 1 cut(s) | 57 |
| MaeIII | GTNAC | 1 cut(s) | 503 |
| MalI | GATC | 5 cut(s) | 221, 287, 301, 510, 550 |
| MboI | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| MboII | GAAGA | 9 cut(s) | 15, 92, 137, 188, 221, 295, 413, 431, 434 |
| MflI | RGATCY | 2 cut(s) | 219, 299 |
| MlyI | GAGTC | 1 cut(s) | 221 |
| MseI | TTAA | 1 cut(s) | 513 |
| MvnI | CGCG | 1 cut(s) | 251 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 75, 102, 111 |
| NdeII | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| NlaIII | CATG | 3 cut(s) | 292, 320, 576 |
| NlaIV | GGNNCC | 1 cut(s) | 16 |
| NspI | RCATGY | 1 cut(s) | 320 |
| PciI | ACATGT | 1 cut(s) | 316 |
| PfeI | GAWTC | 1 cut(s) | 254 |
| PkrI | GCNGC | 3 cut(s) | 7, 490, 571 |
| PleI | GAGTC | 1 cut(s) | 220 |
| PpsI | GAGTC | 1 cut(s) | 220 |
| PscI | ACATGT | 1 cut(s) | 316 |
| PspN4I | GGNNCC | 1 cut(s) | 16 |
| PspPI | GGNCC | 2 cut(s) | 103, 201 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 44, 76 |
| PsuI | RGATCY | 2 cut(s) | 219, 299 |
| RsaI | GTAC | 2 cut(s) | 53, 248 |
| RsaNI | GTAC | 2 cut(s) | 52, 247 |
| SaqAI | TTAA | 1 cut(s) | 513 |
| SatI | GCNGC | 3 cut(s) | 6, 489, 570 |
| Sau3AI | GATC | 5 cut(s) | 219, 285, 299, 508, 548 |
| Sau96I | GGNCC | 2 cut(s) | 103, 201 |
| SchI | GAGTC | 1 cut(s) | 221 |
| SetI | ASST | 9 cut(s) | 16, 60, 71, 146, 248, 279, 349, 373, 490 |
| SmlI | CTYRAG | 1 cut(s) | 64 |
| SmoI | CTYRAG | 1 cut(s) | 64 |
| SsiI | CCGC | 3 cut(s) | 112, 199, 251 |
| SspI | AATATT | 1 cut(s) | 330 |
| SspMI | CTAG | 1 cut(s) | 377 |
| StyI | CCWWGG | 1 cut(s) | 10 |
| TaaI | ACNGT | 1 cut(s) | 195 |
| TaiI | ACGT | 1 cut(s) | 60 |
| TaqI | TCGA | 3 cut(s) | 207, 215, 257 |
| TfiI | GAWTC | 1 cut(s) | 254 |
| Tru1I | TTAA | 1 cut(s) | 513 |
| Tru9I | TTAA | 1 cut(s) | 513 |
| TscAI | CASTG | 1 cut(s) | 526 |
| TseI | GCWGC | 3 cut(s) | 5, 488, 569 |
| TspDTI | ATGAA | 1 cut(s) | 15 |
| TspRI | CASTG | 1 cut(s) | 526 |
| XceI | RCATGY | 1 cut(s) | 320 |
| XspI | CTAG | 1 cut(s) | 377 |